MS003833 (gene) Bitter gourd (TR) v1

Overview


Name	MS003833
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	dapper homolog 3 isoform X1
Location	scaffold127: 835129 .. 839733 (-)
RNA-Seq Expression	MS003833
Synteny	MS003833

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGTTCGAGGGATAAAGATTCTACGACTCACCATCAACCGTTATTGAGCAGCCTTGTAGTACGAGCCTCCAATAGTGATGGAGGTGGTGGTGGAGTCGGCGGAACCAGTGGTGGCCGCGTGGGTCGTGGAAGCGATTATGAGGCCGGTGAGGTTCCCCGCAATCCTCCACAATTTAATCGATTGGATCGATATTCAGATGATTTGGGTTCGTTATTATTCTACTATACACCTTCGTCTTTGCACGCTTTTCGAGCTCTAATTGGATGAATAGTTGCTCTTCTTAAAACTTTTGTGCTGTGAAAATTTTATCCCCGCGTTGAATTCAATCGCCTGTGACCTTAGATTGAATTTGTTGTTTATATATTTTTTTGATAGGAAACGTATTTTCATTAAAAGATTGACAATTGCAAAAATAGGGAGAAAAGGCATTCGAGCCAAGGGAGAATCAAAAAGTTAATCCCACAATCTGAGTGGACCTTGTAAATTTCGTCTTAGTTAAATCCCAATTTGCGAGTTCTGCCTAAATTGTGGGGGAAAATTTAATAGGCCGCTGTATGCTATCGTTTCATGGGAGATGAAATTCCTAAATCTGCCTTTTAAAAAAATAAACAGAAGCATCTTCTTTCTCTCACTCCAAGGACGGGTCATTGCCGTTGGTTCCGTGTACCTTATACTCTTATTGGTCAACTTTTGCCAAGACAATTGCAATATGACAATAATGTTACACTCTGGTCCTTGCTTTCAATTCATAGATAGATAGATATCAATGTATGATTGATAATAAAGGATGGGTTTAAATGTCTTTCCATCTAGAGGAATGCTGTCTAAGAATTTTGCTCAAAATGGTAGATTATTGGAATTATTGGGTTCACGCTTAATTGCAGCAAATGTCTGATAGCATTGGGTGAATTCAATTTGTTACTAGAATCATGTAATAATATGCCCAGCCTACCGGCCCTACTCAACTTTGACAGATAGTGTTAAATGCACAATTCAACGGGAAGCCAAAATTGTCACTCTCTTTTCTCGAAGCTTGTTGGAAAGGATGTATTAGTTTATTTGATATTCAGATAACAATTAAAGCATTTTTCTTAAATCTCAGGCAAACTGTTTGGTAATCTTATATTACTTATCTTATGCAAACGTATTTCAATTTATTAACATCAAATTGTGTATGTAATTTGACATTTTCTCCTTATCCATCAAATTCCAAGTTAGGATGCCATTGATAGCTGGGGTTTTTTTCACATACATTTTTTTCGTCACTGTGATCTTATTGAAAATGTTGTGATATTCTGGTGACATATGAATTACGTGATCTCTCTATTTCTTATTTTTTATCCTCGTTTTCTTTTGTATGTTGAGAATGTGGACCTACTTCAGCATGTCAAACTTTCGTTCTGGGAATAAATTTTTCTATTCTCTTACAGCTTTGTGTTGCCGCCTGCAAGAACTTAGATCTTGAGGAAGGCATTGGGTAAGTGCAGTCTCAGATCATGGTCTTGGGAATTGCTCTTTTTTCATGTTAAGATCATTTAATTTGGGGGGTAAAATTTGTGCGAGAAATTATGGGTTGCAGAGTAGAGAGCTATCATCCGTTGTCATTTTGGGGTACCTATGGTGTTGGGCTTGGTTGGAGTAAGATGTATTAAAATACCAATCAAATTGAATCACTGTGAGGTGAGGTGAGGATTTTTCTCTAAAGGAATTGGAGATGATCAAACAACATGCTAAAGAAGTGTTGTCCTGCCTGGCTGAGAATGTTGGTATGAACTCTAAATGAACTTAAAGGTGCGTTGACTTTGGCTCACTGCAAGAAATAAAATTTACAGTTAAGGGCCACCAATTTTACCATCTGGTATTTGACTTATGTGAAGTGAAGATGCCACTTTTTGTGATGTGGACTTTTTTCCTTGTCTAGATTTCCATTCAAGGGATGAAATTATTCTCATGGAACAGACATTGGTTGGGTCGTATGGGTTGGTTGATTTAGTAAGGGCCATCTTCATTATGTTTAGCAACTTCTTGATCTATTGGTCAGGTTCATTAAGGGGTTGATTTGCAGCAAAGTTTTGGGATCTTCACAATTTATCATGTACCTCATCCTGGAAATTAGGGCTTTTTTTCAACCTAAATATTTGGTAGTGTGAATTGGTATAGCAATGGGCAGCCCAATGGTCAAACAGTTGGATTAACTGCATTCCTCTCATCCTTTCAACTCTTACAAATTTTGTTGTGGTCAGTGACTAAAGTGATCATTGGTCATTTCAACAGGATGTGGCTAGCCCACTAGATTCTGCGGAAAATTGTTTTTGTGGTATGCATGGAAATTCATTGGCATGTTTCTGAAAGCCGTCCTATTGTGACTATTCAAGTAAGATCCGGAGTTGGTTTCTGAACTAACAGAAGATTAGGATGGGTGCCATTGTTTAGTCTGGTTTTTTGGACGCTTCAATTTATGTGGGTTTTTTTTTACGGTTTATTTCCTGTGAACTCTTCACCGTGGTCTTGCTGATCCTCCCAGGTGTCATTCAATTGAAGGGTTCTGTATATTAGTATGGGTTGATTATGCTGTGTGATTACATGAATTCACTTGTACGTGTTGTTCATTTAAGATTGGGCTATTGGTGGGATGTCCTTCCTCCTTGCCAGAACATTAGCGGCACTGAGTTTTTGTTACTTCAAGACTTGTGATTTTGGGTTCATTGCTGTGTTCATGGAAAATTGGAAATAACTTATTTATAGGCCATGGTGATTTTAAATATGGATGGATGTGGGTTTTACATGTATTTTCACTGGACACATTTACTTGAGGAAAGCAGGAAATGTACCAAGTAGCCATGGTTTTGCTATCTTACATGCTTCTGTTAAAATTTATTATGGTATGGGTGGTAATGTATCGAACCTACAAGGGCAATTATCATCAGAACTTTGTCTCTTGTCTGCCTCTTTGCACTTTCTTTTGCTCTGTTCACAGAGAGGAGACACCAGCAATGATTGGCAAATGGTTCGTGTCAATTTTTTTGGTTGGTTGCAGTTCTATCAGGGAAAATCTTTGGAGATAATGTGGATGTTGTACTTCGACTAATTTTCTATTCAAGTTGTTACTTTTTTTAATGTCCTATAAATCTACTACCTTCTTTATTTCAGGATATAGAATACATGCAGGTTCAGCTTCTCCAACACGTCGTCGGGATGATCACCGTTATATTTCTGATTTCGATCATTCTGGTGGTCTTACGCGGGGCCGTGACTTCGGTGGGGGAAGGGATCTTGGTAGATATCGAGACTCTTCACCTCATTACAATCGAAGAATAAGTAGTGGTAGGCCATTTGGGAGAGGCGTTGATGGTCCTGGACTTGCTCATGGGTCATTTAGAGGGGATCGTAGTAAGAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTGTAAGTACTAACCTAGCACTAAAATTTATATATGTAACAATTGATTTACTCCTGTTATGTTCAGATAAACATTTGTTGATAATCATGCGCCATTACACCTTTTATTCATATGAATGAGAAGTTTTCCTGTTGCATTGGATAAGATACTTTTCTATTAATATGTTTTCTGGTTGGTTGAATTATTTTTATCTTTTGATGGGTTGATTCTAAATTTGTGGTTTTGATAATTTTTTGCGGTCGTCTTTCTTAAAAAGTAATTTTTTCTGCATATTTCTTTTACGGAAGTGTCTATAGTGATTGGACTAAATGACAAATACGACATATGAGAAAAGCCTGAGTGTAAGTGAATGATATAGTCTTTGATGTTCTGTTTTCTTCACTATTTGGCATCTGGTACTCATACGTGGATTTTTTAATGCATAGCTTAGTGTACTACTTTCTTTCATTACACTGCTTCAAGGTGCAATTCTTTTTTCAAACCAGTTTTATTCTTGTTCTTCTTTAGATGTCGCAACCTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGATCCCGCCCTGGAGGAGCTGGTGGAAGCCCTCGAAGAAGCTATCTTGGTCCACCATCCCTGCATTCTCCTCCTAGACGTTTTGCTGCCCACCCAATGGAACGTTCTCCTGGCAGAACTCTGGCAGGATATAGGTCTCCTCCCCGTGCTTGGGCCAGGGAGGGTCCTAGAGAGATTGCAGCTGGTGCTCTAGCACCTCCGAGGTATGAAAGCAGGTATCCCGATCACCCCCTGCGAAGAGATAGGGTGGACTATCTAGAAGACTTGAGAGGAAGATCCAAGTTTGATAGGCCGATTCCTGCTGATTGGTCCCTTCGAGACCATGGAAGGGATGACTTCCTTACCGAGAGGAAGGGCTTTGAGAGAGGACCACCTTCTCCACCACTACCACTGCTCTCTCAACGTGGCCGTTGGGCGCGCGATGTGCGGGAGAGAAGTCGTTCCCCAATTAGAGGTCCGGTTAGATCTCCATTGAGAGTCTCGCTTCGATCACCACTAAGTGGAGGCCTTCCGCCAAAAGACTTCCGTAGAGATGTTTATGTTGAAAGGGAGCGCGACGATAGGCGTGGCCTAGGACGAGATCGCGATGGAGGTCCATTC

mRNA sequence

ATGGGTTCGAGGGATAAAGATTCTACGACTCACCATCAACCGTTATTGAGCAGCCTTGTAGTACGAGCCTCCAATAGTGATGGAGGTGGTGGTGGAGTCGGCGGAACCAGTGGTGGCCGCGTGGGTCGTGGAAGCGATTATGAGGCCGGTGAGGTTCCCCGCAATCCTCCACAATTTAATCGATTGGATCGATATTCAGATGATTTGGGATATAGAATACATGCAGGTTCAGCTTCTCCAACACGTCGTCGGGATGATCACCGTTATATTTCTGATTTCGATCATTCTGGTGGTCTTACGCGGGGCCGTGACTTCGGTGGGGGAAGGGATCTTGGTAGATATCGAGACTCTTCACCTCATTACAATCGAAGAATAAGTAGTGGTAGGCCATTTGGGAGAGGCGTTGATGGTCCTGGACTTGCTCATGGGTCATTTAGAGGGGATCGTAGTAAGAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTCGCAACCTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGATCCCGCCCTGGAGGAGCTGGTGGAAGCCCTCGAAGAAGCTATCTTGGTCCACCATCCCTGCATTCTCCTCCTAGACGTTTTGCTGCCCACCCAATGGAACGTTCTCCTGGCAGAACTCTGGCAGGATATAGGTCTCCTCCCCGTGCTTGGGCCAGGGAGGGTCCTAGAGAGATTGCAGCTGGTGCTCTAGCACCTCCGAGGTATGAAAGCAGGTATCCCGATCACCCCCTGCGAAGAGATAGGGTGGACTATCTAGAAGACTTGAGAGGAAGATCCAAGTTTGATAGGCCGATTCCTGCTGATTGGTCCCTTCGAGACCATGGAAGGGATGACTTCCTTACCGAGAGGAAGGGCTTTGAGAGAGGACCACCTTCTCCACCACTACCACTGCTCTCTCAACGTGGCCGTTGGGCGCGCGATGTGCGGGAGAGAAGTCGTTCCCCAATTAGAGGTCCGGTTAGATCTCCATTGAGAGTCTCGCTTCGATCACCACTAAGTGGAGGCCTTCCGCCAAAAGACTTCCGTAGAGATGTTTATGTTGAAAGGGAGCGCGACGATAGGCGTGGCCTAGGACGAGATCGCGATGGAGGTCCATTC

Coding sequence (CDS)

ATGGGTTCGAGGGATAAAGATTCTACGACTCACCATCAACCGTTATTGAGCAGCCTTGTAGTACGAGCCTCCAATAGTGATGGAGGTGGTGGTGGAGTCGGCGGAACCAGTGGTGGCCGCGTGGGTCGTGGAAGCGATTATGAGGCCGGTGAGGTTCCCCGCAATCCTCCACAATTTAATCGATTGGATCGATATTCAGATGATTTGGGATATAGAATACATGCAGGTTCAGCTTCTCCAACACGTCGTCGGGATGATCACCGTTATATTTCTGATTTCGATCATTCTGGTGGTCTTACGCGGGGCCGTGACTTCGGTGGGGGAAGGGATCTTGGTAGATATCGAGACTCTTCACCTCATTACAATCGAAGAATAAGTAGTGGTAGGCCATTTGGGAGAGGCGTTGATGGTCCTGGACTTGCTCATGGGTCATTTAGAGGGGATCGTAGTAAGAATAATCCAAATGTGCGTCCTAGGGATGGGGATTGGTATTGCTCAGATCCTTTATGTCGCAACCTAAACTTTGCAAGACGAGAATTTTGTAACAACTGCAACAGATCCCGCCCTGGAGGAGCTGGTGGAAGCCCTCGAAGAAGCTATCTTGGTCCACCATCCCTGCATTCTCCTCCTAGACGTTTTGCTGCCCACCCAATGGAACGTTCTCCTGGCAGAACTCTGGCAGGATATAGGTCTCCTCCCCGTGCTTGGGCCAGGGAGGGTCCTAGAGAGATTGCAGCTGGTGCTCTAGCACCTCCGAGGTATGAAAGCAGGTATCCCGATCACCCCCTGCGAAGAGATAGGGTGGACTATCTAGAAGACTTGAGAGGAAGATCCAAGTTTGATAGGCCGATTCCTGCTGATTGGTCCCTTCGAGACCATGGAAGGGATGACTTCCTTACCGAGAGGAAGGGCTTTGAGAGAGGACCACCTTCTCCACCACTACCACTGCTCTCTCAACGTGGCCGTTGGGCGCGCGATGTGCGGGAGAGAAGTCGTTCCCCAATTAGAGGTCCGGTTAGATCTCCATTGAGAGTCTCGCTTCGATCACCACTAAGTGGAGGCCTTCCGCCAAAAGACTTCCGTAGAGATGTTTATGTTGAAAGGGAGCGCGACGATAGGCGTGGCCTAGGACGAGATCGCGATGGAGGTCCATTC

Protein sequence

MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFNRLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPHYNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAREGPREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWSLRDHGRDDFLTERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDFRRDVYVERERDDRRGLGRDRDGGPF

Homology

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BLAST of MS003833 vs. NCBI nr
Match: XP_022144869.1 (dapper homolog 3 isoform X1 [Momordica charantia])

HSP 1 Score: 784.6 bits (2025), Expect = 3.8e-223
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQF 
Sbjct: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFT 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYRIHAGSASPTRRRDDHRYISD DHSGGLTRGRDFGGGRDLGRYRDSSPH
Sbjct: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDLDHSGGLTRGRDFGGGRDLGRYRDSSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           YNRRISSGRPFGRGV GPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARRE 
Sbjct: 121 YNRRISSGRPFGRGVYGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREL 180

Query: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAREG 240
           CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAR+G
Sbjct: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARDG 240

Query: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWSLRDHGRDDFLT 300
           PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADW+LRDHGRDDFLT
Sbjct: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWALRDHGRDDFLT 300

Query: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360
           ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF
Sbjct: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360

Query: 361 RRDVYVERERDDRRGLGRDRDGGPF 386
           RRDVYVERERDDRRGLGRDRDGGPF
Sbjct: 361 RRDVYVERERDDRRGLGRDRDGGPF 385

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BLAST of MS003833 vs. NCBI nr
Match: XP_022144870.1 (dapper homolog 3 isoform X2 [Momordica charantia])

HSP 1 Score: 732.3 bits (1889), Expect = 2.2e-207
Identity = 360/385 (93.51%), Postives = 362/385 (94.03%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEA           
Sbjct: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEA----------- 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
                    GYRIHAGSASPTRRRDDHRYISD DHSGGLTRGRDFGGGRDLGRYRDSSPH
Sbjct: 61  ---------GYRIHAGSASPTRRRDDHRYISDLDHSGGLTRGRDFGGGRDLGRYRDSSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           YNRRISSGRPFGRGV GPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARRE 
Sbjct: 121 YNRRISSGRPFGRGVYGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREL 180

Query: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAREG 240
           CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAR+G
Sbjct: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARDG 240

Query: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWSLRDHGRDDFLT 300
           PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADW+LRDHGRDDFLT
Sbjct: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWALRDHGRDDFLT 300

Query: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360
           ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF
Sbjct: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360

Query: 361 RRDVYVERERDDRRGLGRDRDGGPF 386
           RRDVYVERERDDRRGLGRDRDGGPF
Sbjct: 361 RRDVYVERERDDRRGLGRDRDGGPF 365

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BLAST of MS003833 vs. NCBI nr
Match: XP_022961322.1 (uncharacterized protein LOC111461847 isoform X7 [Cucurbita moschata])

HSP 1 Score: 689.5 bits (1778), Expect = 1.7e-194
Identity = 338/387 (87.34%), Postives = 356/387 (91.99%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGGTSGGRVGRGSDYEAGEVPR+PPQ++
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYR+HAGS SPTRRRDDHRYISDFDHS GLTRGR+FGGGRDLGRYRD+SPH
Sbjct: 61  RLDRYSDDLGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           Y+RR+S GRPFGRG DGPG A G FRG+RSKNNPNVRPRDGDWYCSDPLC NLNFARREF
Sbjct: 121 YSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREF 180

Query: 181 CNNCNRSRPGGAGGSPRR-SYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARE 240
           CNNCNR R  GAGGSPRR  Y+GPPSLHSPPRRFAAHP+ERSPGRT+  YRSPPR WAR+
Sbjct: 181 CNNCNRPRT-GAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARD 240

Query: 241 GPREIAAGALAPPRYESRYPDHPLRRDRVDYLED-LRGRSKFDRPIPADWSLRDHGRDDF 300
           GPREIAAG LAPPRYESRY DH LRRDRVDYLED  RGRSKFDR  P+DWSLRD+GRDDF
Sbjct: 241 GPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDF 300

Query: 301 LTERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPK 360
           + ERKGFER PP PPL LL QRGRWARDVRERSRSPIRGPVRSPLRV LRSPLSGGLPPK
Sbjct: 301 INERKGFERRPPPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPK 360

Query: 361 DFRRDVYVERERDDRRGLGRDRDGGPF 386
           D+RRDV+VERERDDRRGLGRDRDGGPF
Sbjct: 361 DYRRDVFVERERDDRRGLGRDRDGGPF 386

[Close]

BLAST of MS003833 vs. NCBI nr
Match: XP_038880192.1 (uncharacterized protein LOC120071861 isoform X1 [Benincasa hispida])

HSP 1 Score: 682.9 bits (1761), Expect = 1.5e-192
Identity = 341/388 (87.89%), Postives = 359/388 (92.53%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGE+ R+PPQ++
Sbjct: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEITRDPPQYS 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYRIHAGS SPTRRRD HRYISDFDHSG LTRGRDFGGGRDLGRYRD+SPH
Sbjct: 61  RLDRYSDDLGYRIHAGSVSPTRRRDVHRYISDFDHSGNLTRGRDFGGGRDLGRYRDTSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           Y+RRIS GRPFGRGVDGP  A G FRG+RSKNNPNVRPRDGDWYCSDPLC NLNFARREF
Sbjct: 121 YSRRISGGRPFGRGVDGP--APGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREF 180

Query: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAREG 240
           CNNCNR R  GA GSPRR Y+GPPSLHSPPRRFAAHP+ERSPGRTL  YRSPPR+WAR+G
Sbjct: 181 CNNCNRPR-NGASGSPRRGYVGPPSLHSPPRRFAAHPIERSPGRTLNEYRSPPRSWARDG 240

Query: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLED-LRGRSKFDRPIP-ADWSLRDHGRDDF 300
           PREIAAG LAPPRYESRY DH LRRDRVDYL+D  RGRSKFDRP+P ADW+LRD+GRDDF
Sbjct: 241 PREIAAGGLAPPRYESRYSDH-LRRDRVDYLDDSFRGRSKFDRPLPSADWALRDNGRDDF 300

Query: 301 LTERKGFERGPPS-PPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPP 360
           ++ERKGFER PPS PPL LL QRGRWARDVRERSRSPIRGPVRSPLRV LRSPLS GLPP
Sbjct: 301 ISERKGFERRPPSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSSGLPP 360

Query: 361 KDFRRDVYVERERDDRRGLGRDRDGGPF 386
           KDFRRDV+VERERDDRRGLGRDRDGGPF
Sbjct: 361 KDFRRDVFVERERDDRRGLGRDRDGGPF 384

[Close]

BLAST of MS003833 vs. NCBI nr
Match: XP_022961321.1 (uncharacterized protein LOC111461847 isoform X6 [Cucurbita moschata])

HSP 1 Score: 682.9 bits (1761), Expect = 1.5e-192
Identity = 338/388 (87.11%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGGTSGGRVGRGSDYEAGEVPR+PPQ++
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYR+HAGS SPTRRRDDHRYISDFDHS GLTRGR+FGGGRDLGRYRD+SPH
Sbjct: 61  RLDRYSDDLGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           Y+RR+S GRPFGRG DGPG A G FRG+RSKNNPNVRPRDGDWYCSDPLC NLNFARREF
Sbjct: 121 YSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREF 180

Query: 181 CNNCNRSRPGGAGGSPRR-SYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARE 240
           CNNCNR R  GAGGSPRR  Y+GPPSLHSPPRRFAAHP+ERSPGRT+  YRSPPR WAR+
Sbjct: 181 CNNCNRPRT-GAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARD 240

Query: 241 GPREIAAGALAPPRYESRYPDHPLRRDRVDYLED-LRGRSKFDRPIPADWSLRDHGRDDF 300
           GPREIAAG LAPPRYESRY DH LRRDRVDYLED  RGRSKFDR  P+DWSLRD+GRDDF
Sbjct: 241 GPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDF 300

Query: 301 LTERKGFERGPPS-PPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPP 360
           + ERKGFER P S PPL LL QRGRWARDVRERSRSPIRGPVRSPLRV LRSPLSGGLPP
Sbjct: 301 INERKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPP 360

Query: 361 KDFRRDVYVERERDDRRGLGRDRDGGPF 386
           KD+RRDV+VERERDDRRGLGRDRDGGPF
Sbjct: 361 KDYRRDVFVERERDDRRGLGRDRDGGPF 387

[Close]

BLAST of MS003833 vs. ExPASy Swiss-Prot
Match: Q28009 (RNA-binding protein FUS OS=Bos taurus OX=9913 GN=FUS PE=2 SV=2)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-07
Identity = 53/175 (30.29%), Postives = 71/175 (40.57%), Query Frame = 0


Query: 102 GRDFGGGRDLGRYRDSSPHYNRRISSGR-------PFGRGVDGPGLAHGSFRG--DRSKN 161
           G++F G      +      +NR   +GR       P GRG  G G + G  RG       
Sbjct: 343 GKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGG 402

Query: 162 NPNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRR 221
               + R GDW C +P C N+NF+ R  CN C   +P G GG P  S++G    +   RR
Sbjct: 403 GGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMG--GNYGDDRR 462

Query: 222 FAAHPMERSPGRTLAGYRSPPRAWAREGPREIAAGALAPPRYESRYPDHPLRRDR 268
                 +R   R   G R   R     G R    G   P + +SR      RR+R
Sbjct: 463 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDR----GGFGPGKMDSRGEHRQDRRER 511

[Close]

BLAST of MS003833 vs. ExPASy Swiss-Prot
Match: P35637 (RNA-binding protein FUS OS=Homo sapiens OX=9606 GN=FUS PE=1 SV=1)

HSP 1 Score: 58.5 bits (140), Expect = 1.9e-07
Identity = 53/175 (30.29%), Postives = 71/175 (40.57%), Query Frame = 0


Query: 102 GRDFGGGRDLGRYRDSSPHYNRRISSGR-------PFGRGVDGPGLAHGSFRG--DRSKN 161
           G++F G      +      +NR   +GR       P GRG  G G + G  RG       
Sbjct: 356 GKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGG 415

Query: 162 NPNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRR 221
               + R GDW C +P C N+NF+ R  CN C   +P G GG P  S++G    +   RR
Sbjct: 416 GGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMG--GNYGDDRR 475

Query: 222 FAAHPMERSPGRTLAGYRSPPRAWAREGPREIAAGALAPPRYESRYPDHPLRRDR 268
                 +R   R   G R   R     G R    G   P + +SR      RR+R
Sbjct: 476 GGRGGYDRGGYRGRGGDRGGFRGGRGGGDR----GGFGPGKMDSRGEHRQDRRER 524

[Close]

BLAST of MS003833 vs. ExPASy Swiss-Prot
Match: P56959 (RNA-binding protein FUS OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1)

HSP 1 Score: 55.1 bits (131), Expect = 2.1e-06
Identity = 53/175 (30.29%), Postives = 71/175 (40.57%), Query Frame = 0


Query: 102 GRDFGGGRDLGRYRDSSPHYNRRISSGR-------PFGRGVDGPGLAHGSFRG--DRSKN 161
           G++F G      +      +NR   +GR       P GRG  G G + G  RG       
Sbjct: 349 GKEFSGNPIKVSFATRRADFNRGGGNGRGGRGRGGPMGRGGYGGGGSGGGGRGGFPSGGG 408

Query: 162 NPNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRR 221
               + R GDW C +P C N+NF+ R  CN C   +P G GG P  S++G    +   RR
Sbjct: 409 GGGGQQRAGDWKCPNPTCENMNFSWRNECNQCKAPKPDGPGGGPGGSHMG--GNYGDDRR 468

Query: 222 FAAHPMERSPGRTLAGYRSPPRAWAREGPREIAAGALAPPRYESRYPDHPLRRDR 268
                 +R   R   G R   R     G R    G   P + +SR      RR+R
Sbjct: 469 -GRGGYDRGGYRGRGGDRGGFRGGRGGGDR----GGFGPGKMDSRGEHRQDRRER 516

[Close]

BLAST of MS003833 vs. ExPASy Swiss-Prot
Match: Q92804 (TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.9e-06
Identity = 30/88 (34.09%), Postives = 38/88 (43.18%), Query Frame = 0


Query: 102 GRDFGGGRDLGRYRDSSPHYNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDG 161
           G++F G      +    P + R        G G  G     G +RG          P+ G
Sbjct: 305 GKEFHGNIIKVSFATRRPEFMR--------GGGSGGGRRGRGGYRGRGGFQGRGGDPKSG 364

Query: 162 DWYCSDPLCRNLNFARREFCNNCNRSRP 190
           DW C +P C N+NFARR  CN CN  RP
Sbjct: 365 DWVCPNPSCGNMNFARRNSCNQCNEPRP 384

[Close]

BLAST of MS003833 vs. ExPASy Swiss-Prot
Match: Q94KD0 (Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=3702 GN=TAF15B PE=1 SV=1)

HSP 1 Score: 53.1 bits (126), Expect = 7.9e-06
Identity = 41/103 (39.81%), Postives = 43/103 (41.75%), Query Frame = 0


Query: 89  YISDFDHSGGLTRGRDFGGGRDLGRYRDSSPHYNRRISSGRPFGRGVDGPGLAHGSFRGD 148
           Y  D    GG   G D G G   GR       Y  R   G   GRG  G G   G   GD
Sbjct: 18  YGGDGYGGGGGYGGGDAGYG---GRGASGGGSYGGRGGYGGGGGRGNRGGG-GGGYQGGD 77

Query: 149 RSKNNPNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRSRPGG 192
           R         RDGDW C +P C N+NFARR  CN C    P G
Sbjct: 78  RGGRGSGGGGRDGDWRCPNPSCGNVNFARRVECNKCGALAPSG 116

[Close]

BLAST of MS003833 vs. ExPASy TrEMBL
Match: A0A6J1CTI5 (dapper homolog 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014447 PE=4 SV=1)

HSP 1 Score: 784.6 bits (2025), Expect = 1.8e-223
Identity = 379/385 (98.44%), Postives = 381/385 (98.96%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQF 
Sbjct: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFT 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYRIHAGSASPTRRRDDHRYISD DHSGGLTRGRDFGGGRDLGRYRDSSPH
Sbjct: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDLDHSGGLTRGRDFGGGRDLGRYRDSSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           YNRRISSGRPFGRGV GPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARRE 
Sbjct: 121 YNRRISSGRPFGRGVYGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREL 180

Query: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAREG 240
           CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAR+G
Sbjct: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARDG 240

Query: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWSLRDHGRDDFLT 300
           PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADW+LRDHGRDDFLT
Sbjct: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWALRDHGRDDFLT 300

Query: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360
           ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF
Sbjct: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360

Query: 361 RRDVYVERERDDRRGLGRDRDGGPF 386
           RRDVYVERERDDRRGLGRDRDGGPF
Sbjct: 361 RRDVYVERERDDRRGLGRDRDGGPF 385

[Close]

BLAST of MS003833 vs. ExPASy TrEMBL
Match: A0A6J1CSV5 (dapper homolog 3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014447 PE=4 SV=1)

HSP 1 Score: 732.3 bits (1889), Expect = 1.1e-207
Identity = 360/385 (93.51%), Postives = 362/385 (94.03%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEA           
Sbjct: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEA----------- 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
                    GYRIHAGSASPTRRRDDHRYISD DHSGGLTRGRDFGGGRDLGRYRDSSPH
Sbjct: 61  ---------GYRIHAGSASPTRRRDDHRYISDLDHSGGLTRGRDFGGGRDLGRYRDSSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           YNRRISSGRPFGRGV GPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARRE 
Sbjct: 121 YNRRISSGRPFGRGVYGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREL 180

Query: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAREG 240
           CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAR+G
Sbjct: 181 CNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARDG 240

Query: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWSLRDHGRDDFLT 300
           PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADW+LRDHGRDDFLT
Sbjct: 241 PREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKFDRPIPADWALRDHGRDDFLT 300

Query: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360
           ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF
Sbjct: 301 ERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPKDF 360

Query: 361 RRDVYVERERDDRRGLGRDRDGGPF 386
           RRDVYVERERDDRRGLGRDRDGGPF
Sbjct: 361 RRDVYVERERDDRRGLGRDRDGGPF 365

[Close]

BLAST of MS003833 vs. ExPASy TrEMBL
Match: A0A6J1H9W7 (uncharacterized protein LOC111461847 isoform X7 OS=Cucurbita moschata OX=3662 GN=LOC111461847 PE=4 SV=1)

HSP 1 Score: 689.5 bits (1778), Expect = 8.0e-195
Identity = 338/387 (87.34%), Postives = 356/387 (91.99%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGGTSGGRVGRGSDYEAGEVPR+PPQ++
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYR+HAGS SPTRRRDDHRYISDFDHS GLTRGR+FGGGRDLGRYRD+SPH
Sbjct: 61  RLDRYSDDLGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           Y+RR+S GRPFGRG DGPG A G FRG+RSKNNPNVRPRDGDWYCSDPLC NLNFARREF
Sbjct: 121 YSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREF 180

Query: 181 CNNCNRSRPGGAGGSPRR-SYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARE 240
           CNNCNR R  GAGGSPRR  Y+GPPSLHSPPRRFAAHP+ERSPGRT+  YRSPPR WAR+
Sbjct: 181 CNNCNRPRT-GAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARD 240

Query: 241 GPREIAAGALAPPRYESRYPDHPLRRDRVDYLED-LRGRSKFDRPIPADWSLRDHGRDDF 300
           GPREIAAG LAPPRYESRY DH LRRDRVDYLED  RGRSKFDR  P+DWSLRD+GRDDF
Sbjct: 241 GPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDF 300

Query: 301 LTERKGFERGPPSPPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPPK 360
           + ERKGFER PP PPL LL QRGRWARDVRERSRSPIRGPVRSPLRV LRSPLSGGLPPK
Sbjct: 301 INERKGFERRPPPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPPK 360

Query: 361 DFRRDVYVERERDDRRGLGRDRDGGPF 386
           D+RRDV+VERERDDRRGLGRDRDGGPF
Sbjct: 361 DYRRDVFVERERDDRRGLGRDRDGGPF 386

[Close]

BLAST of MS003833 vs. ExPASy TrEMBL
Match: A0A6J1HA20 (uncharacterized protein LOC111461847 isoform X6 OS=Cucurbita moschata OX=3662 GN=LOC111461847 PE=4 SV=1)

HSP 1 Score: 682.9 bits (1761), Expect = 7.5e-193
Identity = 338/388 (87.11%), Postives = 356/388 (91.75%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGGTSGGRVGRGSDYEAGEVPR+PPQ++
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYR+HAGS SPTRRRDDHRYISDFDHS GLTRGR+FGGGRDLGRYRD+SPH
Sbjct: 61  RLDRYSDDLGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           Y+RR+S GRPFGRG DGPG A G FRG+RSKNNPNVRPRDGDWYCSDPLC NLNFARREF
Sbjct: 121 YSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREF 180

Query: 181 CNNCNRSRPGGAGGSPRR-SYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARE 240
           CNNCNR R  GAGGSPRR  Y+GPPSLHSPPRRFAAHP+ERSPGRT+  YRSPPR WAR+
Sbjct: 181 CNNCNRPRT-GAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARD 240

Query: 241 GPREIAAGALAPPRYESRYPDHPLRRDRVDYLED-LRGRSKFDRPIPADWSLRDHGRDDF 300
           GPREIAAG LAPPRYESRY DH LRRDRVDYLED  RGRSKFDR  P+DWSLRD+GRDDF
Sbjct: 241 GPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDF 300

Query: 301 LTERKGFERGPPS-PPLPLLSQRGRWARDVRERSRSPIRGPVRSPLRVSLRSPLSGGLPP 360
           + ERKGFER P S PPL LL QRGRWARDVRERSRSPIRGPVRSPLRV LRSPLSGGLPP
Sbjct: 301 INERKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRGPVRSPLRVPLRSPLSGGLPP 360

Query: 361 KDFRRDVYVERERDDRRGLGRDRDGGPF 386
           KD+RRDV+VERERDDRRGLGRDRDGGPF
Sbjct: 361 KDYRRDVFVERERDDRRGLGRDRDGGPF 387

[Close]

BLAST of MS003833 vs. ExPASy TrEMBL
Match: A0A6J1HBT6 (uncharacterized protein LOC111461847 isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111461847 PE=4 SV=1)

HSP 1 Score: 675.2 bits (1741), Expect = 1.6e-190
Identity = 338/408 (82.84%), Postives = 356/408 (87.25%), Query Frame = 0


Query: 1   MGSRDKDSTTHHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQFN 60
           MGSR KDSTTHHQPLLSSLVVR SNSDGGGGGVGGTSGGRVGRGSDYEAGEVPR+PPQ++
Sbjct: 1   MGSRGKDSTTHHQPLLSSLVVRPSNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRDPPQYS 60

Query: 61  RLDRYSDDLGYRIHAGSASPTRRRDDHRYISDFDHSGGLTRGRDFGGGRDLGRYRDSSPH 120
           RLDRYSDDLGYR+HAGS SPTRRRDDHRYISDFDHS GLTRGR+FGGGRDLGRYRD+SPH
Sbjct: 61  RLDRYSDDLGYRMHAGSVSPTRRRDDHRYISDFDHSSGLTRGREFGGGRDLGRYRDTSPH 120

Query: 121 YNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNNPNVRPRDGDWYCSDPLCRNLNFARREF 180
           Y+RR+S GRPFGRG DGPG A G FRG+RSKNNPNVRPRDGDWYCSDPLC NLNFARREF
Sbjct: 121 YSRRVSGGRPFGRGFDGPGHAPGPFRGERSKNNPNVRPRDGDWYCSDPLCDNLNFARREF 180

Query: 181 CNNCNRSRPGGAGGSPRR-SYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWARE 240
           CNNCNR R  GAGGSPRR  Y+GPPSLHSPPRRFAAHP+ERSPGRT+  YRSPPR WAR+
Sbjct: 181 CNNCNRPRT-GAGGSPRRGGYVGPPSLHSPPRRFAAHPIERSPGRTVNEYRSPPRGWARD 240

Query: 241 GPREIAAGALAPPRYESRYPDHPLRRDRVDYLED-LRGRSKFDRPIPADWSLRDHGRDDF 300
           GPREIAAG LAPPRYESRY DH LRRDRVDYLED  RGRSKFDR  P+DWSLRD+GRDDF
Sbjct: 241 GPREIAAGGLAPPRYESRYSDHHLRRDRVDYLEDSFRGRSKFDRLPPSDWSLRDNGRDDF 300

Query: 301 LTERKGFERGPPS---------------------PPLPLLSQRGRWARDVRERSRSPIRG 360
           + ERKGFER P S                     PPL LL QRGRWARDVRERSRSPIRG
Sbjct: 301 INERKGFERRPLSPKGFERRPLSPKGFERRPLSPPPLSLLPQRGRWARDVRERSRSPIRG 360

Query: 361 PVRSPLRVSLRSPLSGGLPPKDFRRDVYVERERDDRRGLGRDRDGGPF 386
           PVRSPLRV LRSPLSGGLPPKD+RRDV+VERERDDRRGLGRDRDGGPF
Sbjct: 361 PVRSPLRVPLRSPLSGGLPPKDYRRDVFVERERDDRRGLGRDRDGGPF 407

[Close]

BLAST of MS003833 vs. TAIR 10
Match: AT4G28990.1 (RNA-binding protein-related )

HSP 1 Score: 225.3 bits (573), Expect = 8.2e-59
Identity = 175/402 (43.53%), Postives = 213/402 (52.99%), Query Frame = 0


Query: 1   MGSRDKDSTT-HHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQF 60
           MGS +K+ TT HH P +SSLVVR S S+           GR   G DYE GEV R+ P F
Sbjct: 1   MGSTEKEQTTQHHPPHISSLVVRPSGSN-------DREDGRNAAG-DYEPGEVSRDRPSF 60

Query: 61  NRLDRY-SDDLGYRIHAGSASPTRR-RDDHRYISDFDHSGGLTRGRDFGGGRDL-GRYRD 120
           NR DRY  D+ G+R  A S+SP RR  +DH++ SD +HSG   RGR+    R+  GR+RD
Sbjct: 61  NRSDRYKGDNGGHRTRASSSSPGRRGYEDHKHGSDLNHSGVPPRGRELSSRREAPGRHRD 120

Query: 121 SSPHYNRRISSGRPFGRGVDGPGLAHGSFRGDRSKNN-PNVRPRDGDWYCSDPLCRNLNF 180
            SP   R  +  RP+ RG+DGP   HG  R   S+NN   V+PR+GDWYC DPLCRNLNF
Sbjct: 121 YSPPLARGGAGARPYRRGLDGPEPPHG--RDGMSRNNISKVQPREGDWYCLDPLCRNLNF 180

Query: 181 ARREFCNNCNRSRPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRA 240
           ARRE C  C R R   A   P    L PP  HSP R F              GYRSPPR 
Sbjct: 181 ARRESCYKCKRHRYAPANSPPLPRLLPPPMNHSPRRDF-------------NGYRSPPRG 240

Query: 241 WAREGPREIAAGALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKF-------DRPIPADW 300
           W R+ P         PPR+     DHP  RDR       R R  +        R I +DW
Sbjct: 241 WPRDYP---------PPRH-----DHPTWRDRE------RDRPHYSDHEYPPSRRIASDW 300

Query: 301 SLRDHGRDDFLTERKGFERGPP-SPPLPLLSQRGRWARDVRERSRS-PIRGPVRSPLRVS 360
           +  +         +  ++R PP SPP     + GRW R +RERSRS P+R     PLR  
Sbjct: 301 AHTEP------LPKPHYDRRPPLSPP-----RGGRWGRVLRERSRSPPLRDVPPPPLRDG 347

Query: 361 LRSPLSGGLPP--KDFRRDVYVERE-RDDRRGLGRDRDGGPF 386
               L GG PP  +D+RRD + +RE RDD RG GR R G  +
Sbjct: 361 PPPSLRGGGPPLHRDYRRDSHFDRERRDDGRG-GRGRMGNSY 347

[Close]

BLAST of MS003833 vs. TAIR 10
Match: AT4G28990.2 (RNA-binding protein-related )

HSP 1 Score: 209.1 bits (531), Expect = 6.1e-54
Identity = 176/450 (39.11%), Postives = 213/450 (47.33%), Query Frame = 0


Query: 1   MGSRDKDSTT-HHQPLLSSLVVRASNSDGGGGGVGGTSGGRVGRGSDYEAGEVPRNPPQF 60
           MGS +K+ TT HH P +SSLVVR S S+           GR   G DYE GEV R+ P F
Sbjct: 1   MGSTEKEQTTQHHPPHISSLVVRPSGSN-------DREDGRNAAG-DYEPGEVSRDRPSF 60

Query: 61  NRLDRYSDD-------------------------------------------------LG 120
           NR DRY  D                                                 LG
Sbjct: 61  NRSDRYKGDNGELSRHHLFLSLQMLVIVYVLVNVFDNALITITMLCKLQMSIVLALKYLG 120

Query: 121 YRIHAGSASPTRR-RDDHRYISDFDHSGGLTRGRDFGGGRDL-GRYRDSSPHYNRRISSG 180
           +R  A S+SP RR  +DH++ SD +HSG   RGR+    R+  GR+RD SP   R  +  
Sbjct: 121 HRTRASSSSPGRRGYEDHKHGSDLNHSGVPPRGRELSSRREAPGRHRDYSPPLARGGAGA 180

Query: 181 RPFGRGVDGPGLAHGSFRGDRSKNN-PNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRS 240
           RP+ RG+DGP   HG  R   S+NN   V+PR+GDWYC DPLCRNLNFARRE C  C R 
Sbjct: 181 RPYRRGLDGPEPPHG--RDGMSRNNISKVQPREGDWYCLDPLCRNLNFARRESCYKCKRH 240

Query: 241 RPGGAGGSPRRSYLGPPSLHSPPRRFAAHPMERSPGRTLAGYRSPPRAWAREGPREIAAG 300
           R   A   P    L PP  HSP R F              GYRSPPR W R+ P      
Sbjct: 241 RYAPANSPPLPRLLPPPMNHSPRRDF-------------NGYRSPPRGWPRDYP------ 300

Query: 301 ALAPPRYESRYPDHPLRRDRVDYLEDLRGRSKF-------DRPIPADWSLRDHGRDDFLT 360
              PPR+     DHP  RDR       R R  +        R I +DW+  +        
Sbjct: 301 ---PPRH-----DHPTWRDRE------RDRPHYSDHEYPPSRRIASDWAHTEP------L 360

Query: 361 ERKGFERGPP-SPPLPLLSQRGRWARDVRERSRS-PIRGPVRSPLRVSLRSPLSGGLPP- 386
            +  ++R PP SPP     + GRW R +RERSRS P+R     PLR      L GG PP 
Sbjct: 361 PKPHYDRRPPLSPP-----RGGRWGRVLRERSRSPPLRDVPPPPLRDGPPPSLRGGGPPL 395

[Close]

BLAST of MS003833 vs. TAIR 10
Match: AT5G58470.1 (TBP-associated factor 15B )

HSP 1 Score: 53.1 bits (126), Expect = 5.6e-07
Identity = 41/103 (39.81%), Postives = 43/103 (41.75%), Query Frame = 0


Query: 89  YISDFDHSGGLTRGRDFGGGRDLGRYRDSSPHYNRRISSGRPFGRGVDGPGLAHGSFRGD 148
           Y  D    GG   G D G G   GR       Y  R   G   GRG  G G   G   GD
Sbjct: 18  YGGDGYGGGGGYGGGDAGYG---GRGASGGGSYGGRGGYGGGGGRGNRGGG-GGGYQGGD 77

Query: 149 RSKNNPNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRSRPGG 192
           R         RDGDW C +P C N+NFARR  CN C    P G
Sbjct: 78  RGGRGSGGGGRDGDWRCPNPSCGNVNFARRVECNKCGALAPSG 116

[Close]

BLAST of MS003833 vs. TAIR 10
Match: AT5G58470.2 (TBP-associated factor 15B )

HSP 1 Score: 53.1 bits (126), Expect = 5.6e-07
Identity = 41/103 (39.81%), Postives = 43/103 (41.75%), Query Frame = 0


Query: 89  YISDFDHSGGLTRGRDFGGGRDLGRYRDSSPHYNRRISSGRPFGRGVDGPGLAHGSFRGD 148
           Y  D    GG   G D G G   GR       Y  R   G   GRG  G G   G   GD
Sbjct: 18  YGGDGYGGGGGYGGGDAGYG---GRGASGGGSYGGRGGYGGGGGRGNRGGG-GGGYQGGD 77

Query: 149 RSKNNPNVRPRDGDWYCSDPLCRNLNFARREFCNNCNRSRPGG 192
           R         RDGDW C +P C N+NFARR  CN C    P G
Sbjct: 78  RGGRGSGGGGRDGDWRCPNPSCGNVNFARRVECNKCGALAPSG 116

The following BLAST results are available for this feature:

BLAST of MS003833 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144869.1	3.8e-223	98.44	dapper homolog 3 isoform X1 [Momordica charantia]	[more]
XP_022144870.1	2.2e-207	93.51	dapper homolog 3 isoform X2 [Momordica charantia]	[more]
XP_022961322.1	1.7e-194	87.34	uncharacterized protein LOC111461847 isoform X7 [Cucurbita moschata]	[more]
XP_038880192.1	1.5e-192	87.89	uncharacterized protein LOC120071861 isoform X1 [Benincasa hispida]	[more]
XP_022961321.1	1.5e-192	87.11	uncharacterized protein LOC111461847 isoform X6 [Cucurbita moschata]	[more]

BLAST of MS003833 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q28009	1.9e-07	30.29	RNA-binding protein FUS OS=Bos taurus OX=9913 GN=FUS PE=2 SV=2	[more]
P35637	1.9e-07	30.29	RNA-binding protein FUS OS=Homo sapiens OX=9606 GN=FUS PE=1 SV=1	[more]
P56959	2.1e-06	30.29	RNA-binding protein FUS OS=Mus musculus OX=10090 GN=Fus PE=1 SV=1	[more]
Q92804	7.9e-06	34.09	TATA-binding protein-associated factor 2N OS=Homo sapiens OX=9606 GN=TAF15 PE=1 ...	[more]
Q94KD0	7.9e-06	39.81	Transcription initiation factor TFIID subunit 15b OS=Arabidopsis thaliana OX=370...	[more]

BLAST of MS003833 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTI5	1.8e-223	98.44	dapper homolog 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111014447 PE=4 ...	[more]
A0A6J1CSV5	1.1e-207	93.51	dapper homolog 3 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111014447 PE=4 ...	[more]
A0A6J1H9W7	8.0e-195	87.34	uncharacterized protein LOC111461847 isoform X7 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HA20	7.5e-193	87.11	uncharacterized protein LOC111461847 isoform X6 OS=Cucurbita moschata OX=3662 GN...	[more]
A0A6J1HBT6	1.6e-190	82.84	uncharacterized protein LOC111461847 isoform X2 OS=Cucurbita moschata OX=3662 GN...	[more]

BLAST of MS003833 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G28990.1	8.2e-59	43.53	RNA-binding protein-related	[more]
AT4G28990.2	6.1e-54	39.11	RNA-binding protein-related	[more]
AT5G58470.1	5.6e-07	39.81	TBP-associated factor 15B	[more]
AT5G58470.2	5.6e-07	39.81	TBP-associated factor 15B	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001876	Zinc finger, RanBP2-type	SMART	SM00547	zf_4	coord: 161..187 e-value: 3.8E-4 score: 29.8
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS01358	ZF_RANBP2_1	coord: 163..184
IPR001876	Zinc finger, RanBP2-type	PROSITE	PS50199	ZF_RANBP2_2	coord: 159..190 score: 9.450083
None	No IPR available	GENE3D	4.10.1060.10		coord: 149..191 e-value: 1.2E-11 score: 45.6
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 78..99
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 300..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 185..235
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 106..122
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 360..385
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..158
None	No IPR available	PANTHER	PTHR23238:SF26	GH13594P-RELATED	coord: 70..370
IPR034870	TAF15/EWS/TLS family	PANTHER	PTHR23238	RNA BINDING PROTEIN	coord: 70..370
IPR036443	Zinc finger, RanBP2-type superfamily	SUPERFAMILY	90209	Ran binding protein zinc finger-like	coord: 151..191

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003833.1	MS003833.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003723	RNA binding