MS003829 (gene) Bitter gourd (TR) v1

Overview


Name	MS003829
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Dynein light chain
Location	scaffold127: 811915 .. 812190 (+)
RNA-Seq Expression	MS003829
Synteny	MS003829

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTTGGAAGGGAAGGGCAGGGTGAAAGAAACCGACATGTCGGAGAAGATGCAGATTCACGCCATGGCCTCTGCATCTCACGCCCTCGATCTCTTCGACGTCTCCGATTGCCTCTCCCTCGCCGCCCATATCAAAAAGGAATTCGATCGCACTTATGGAGGTGGATGGCAATGCGTGGTGGGTTCCAATTTCGGCTCTTTCTTCACCCATTCCACCGCCACTTTCATCTATTTTGCCCTCGAAACTCTCAATTTTCTCATCTTTAAACCTCCTCCT

mRNA sequence

ATGTTGGAAGGGAAGGGCAGGGTGAAAGAAACCGACATGTCGGAGAAGATGCAGATTCACGCCATGGCCTCTGCATCTCACGCCCTCGATCTCTTCGACGTCTCCGATTGCCTCTCCCTCGCCGCCCATATCAAAAAGGAATTCGATCGCACTTATGGAGGTGGATGGCAATGCGTGGTGGGTTCCAATTTCGGCTCTTTCTTCACCCATTCCACCGCCACTTTCATCTATTTTGCCCTCGAAACTCTCAATTTTCTCATCTTTAAACCTCCTCCT

Coding sequence (CDS)

ATGTTGGAAGGGAAGGGCAGGGTGAAAGAAACCGACATGTCGGAGAAGATGCAGATTCACGCCATGGCCTCTGCATCTCACGCCCTCGATCTCTTCGACGTCTCCGATTGCCTCTCCCTCGCCGCCCATATCAAAAAGGAATTCGATCGCACTTATGGAGGTGGATGGCAATGCGTGGTGGGTTCCAATTTCGGCTCTTTCTTCACCCATTCCACCGCCACTTTCATCTATTTTGCCCTCGAAACTCTCAATTTTCTCATCTTTAAACCTCCTCCT

Protein sequence

MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVVGSNFGSFFTHSTATFIYFALETLNFLIFKPPP

Homology

[Close]

BLAST of MS003829 vs. NCBI nr
Match: XP_022144999.1 (dynein light chain 1, cytoplasmic-like [Momordica charantia])

HSP 1 Score: 189.9 bits (481), Expect = 9.8e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPPP 93
          GSNFGSFFTHSTATFIYFALETLNFLIFKPPP
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPPP 92

[Close]

BLAST of MS003829 vs. NCBI nr
Match: XP_022933771.1 (dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dynein light chain 1, cytoplasmic-like [Cucurbita maxima] >XP_023529424.1 dynein light chain 1, cytoplasmic-like [Cucurbita pepo subsp. pepo] >KAG6587968.1 hypothetical protein SDJN03_16533, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021857.1 hypothetical protein SDJN02_15585 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 162.9 bits (411), Expect = 1.3e-36
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VK+TDMSEKMQIHA ASASHALDLFDVSDCLSLAAHIKKEFDR+YG GWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          GSNFG FFTHS  TFIYF+LETLNFLIFK
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFK 89

[Close]

BLAST of MS003829 vs. NCBI nr
Match: XP_038878771.1 (dynein light chain 1, cytoplasmic-like [Benincasa hispida])

HSP 1 Score: 159.5 bits (402), Expect = 1.4e-35
Identity = 78/91 (85.71%), Postives = 81/91 (89.01%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VKETDMSEKMQ HAMASASHALDLFDVSD LSLAAHIKK+FDR YG GWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQSHAMASASHALDLFDVSDSLSLAAHIKKDFDRAYGSGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPP 92
          GSNFG FFTHS  +FIYF+LETLNFLIFK P
Sbjct: 61 GSNFGCFFTHSKGSFIYFSLETLNFLIFKSP 91

[Close]

BLAST of MS003829 vs. NCBI nr
Match: XP_008462685.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo])

HSP 1 Score: 157.5 bits (397), Expect = 5.4e-35
Identity = 77/91 (84.62%), Postives = 82/91 (90.11%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VKETDMSEKMQ+HAMASASHALDLFDVSD LSLA++IKK+FD TYG GWQCVV
Sbjct: 1  MLEGKATVKETDMSEKMQMHAMASASHALDLFDVSDFLSLASYIKKDFDGTYGSGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPP 92
          GSNFG FFTHS  TFIYF+LETLNFLIFK P
Sbjct: 61 GSNFGCFFTHSMGTFIYFSLETLNFLIFKSP 91

[Close]

BLAST of MS003829 vs. NCBI nr
Match: XP_017441827.1 (PREDICTED: dynein light chain 1, cytoplasmic-like [Vigna angularis] >KAG2411003.1 uncharacterized protein HKW66_Vig0016680 [Vigna angularis] >KOM57800.1 hypothetical protein LR48_Vigan11g083300 [Vigna angularis] >BAT72827.1 hypothetical protein VIGAN_01026900 [Vigna angularis var. angularis])

HSP 1 Score: 157.5 bits (397), Expect = 5.4e-35
Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VKETDMS KMQIHAMA+ASHALDL+DVSDC+S+AAHIKKEFD  YG GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          GSNFG +FTHS+ TFIYFALETLNFLIFK
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFK 89

[Close]

BLAST of MS003829 vs. ExPASy Swiss-Prot
Match: P61285 (Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          M + K  +K  DMSE+MQ  ++  A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          G NFGS+ TH T  FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS003829 vs. ExPASy Swiss-Prot
Match: P63167 (Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          M + K  +K  DMSE+MQ  ++  A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          G NFGS+ TH T  FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS003829 vs. ExPASy Swiss-Prot
Match: P61273 (Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          M + K  +K  DMSE+MQ  ++  A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          G NFGS+ TH T  FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS003829 vs. ExPASy Swiss-Prot
Match: P63168 (Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          M + K  +K  DMSE+MQ  ++  A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          G NFGS+ TH T  FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS003829 vs. ExPASy Swiss-Prot
Match: P63169 (Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=1 SV=1)

HSP 1 Score: 82.8 bits (203), Expect = 2.2e-15
Identity = 41/89 (46.07%), Postives = 57/89 (64.04%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          M + K  +K  DMSE+MQ  ++  A+ AL+ +++     +AAHIKKEFD+ Y   W C+V
Sbjct: 1  MCDRKAVIKNADMSEEMQQDSVECATQALEKYNIEK--DIAAHIKKEFDKKYNPTWHCIV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          G NFGS+ TH T  FIYF L  +  L+FK
Sbjct: 61 GRNFGSYVTHETKHFIYFYLGQVAILLFK 87

[Close]

BLAST of MS003829 vs. ExPASy TrEMBL
Match: A0A6J1CTX2 (Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 4.8e-45
Identity = 92/92 (100.00%), Postives = 92/92 (100.00%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV
Sbjct: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPPP 93
          GSNFGSFFTHSTATFIYFALETLNFLIFKPPP
Sbjct: 61 GSNFGSFFTHSTATFIYFALETLNFLIFKPPP 92

[Close]

BLAST of MS003829 vs. ExPASy TrEMBL
Match: A0A6J1I806 (Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.2e-37
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VK+TDMSEKMQIHA ASASHALDLFDVSDCLSLAAHIKKEFDR+YG GWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          GSNFG FFTHS  TFIYF+LETLNFLIFK
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFK 89

[Close]

BLAST of MS003829 vs. ExPASy TrEMBL
Match: A0A6J1EZZ1 (Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1)

HSP 1 Score: 162.9 bits (411), Expect = 6.2e-37
Identity = 79/89 (88.76%), Postives = 82/89 (92.13%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VK+TDMSEKMQIHA ASASHALDLFDVSDCLSLAAHIKKEFDR+YG GWQCVV
Sbjct: 1  MLEGKATVKQTDMSEKMQIHAKASASHALDLFDVSDCLSLAAHIKKEFDRSYGSGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          GSNFG FFTHS  TFIYF+LETLNFLIFK
Sbjct: 61 GSNFGCFFTHSKGTFIYFSLETLNFLIFK 89

[Close]

BLAST of MS003829 vs. ExPASy TrEMBL
Match: A0A1S3UQ79 (Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.6e-35
Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VKETDMS KMQIHAMA+ASHALDL+DVSDC+S+AAHIKKEFD  YG GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          GSNFG +FTHS+ TFIYFALETLNFLIFK
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFK 89

[Close]

BLAST of MS003829 vs. ExPASy TrEMBL
Match: A0A0L9VRV1 (Dynein light chain OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g083300 PE=3 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 2.6e-35
Identity = 75/89 (84.27%), Postives = 81/89 (91.01%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  VKETDMS KMQIHAMA+ASHALDL+DVSDC+S+AAHIKKEFD  YG GWQCVV
Sbjct: 1  MLEGKALVKETDMSPKMQIHAMAAASHALDLYDVSDCISVAAHIKKEFDSVYGNGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          GSNFG +FTHS+ TFIYFALETLNFLIFK
Sbjct: 61 GSNFGCYFTHSSGTFIYFALETLNFLIFK 89

[Close]

BLAST of MS003829 vs. TAIR 10
Match: AT1G52240.2 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 135.2 bits (339), Expect = 2.7e-32
Identity = 66/89 (74.16%), Postives = 71/89 (79.78%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  V+++DM  KMQ+ AMA AS ALDLFDV DC S+A HIKKEFD  YG GWQCVV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          GSNFG FFTHS  TFIYF LETL FLIFK
Sbjct: 61 GSNFGCFFTHSKGTFIYFQLETLKFLIFK 89

[Close]

BLAST of MS003829 vs. TAIR 10
Match: AT3G16120.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 133.3 bits (334), Expect = 1.0e-31
Identity = 65/89 (73.03%), Postives = 72/89 (80.90%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK +V+ETDM  KMQ+ AM  AS +LDLFDV D +S+AAHIKKEFD  YG GWQCVV
Sbjct: 1  MLEGKAKVEETDMPVKMQMQAMKIASQSLDLFDVFDSISIAAHIKKEFDERYGSGWQCVV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          G+NFG FFTHS  TFIYF L TLNFLIFK
Sbjct: 61 GTNFGCFFTHSKGTFIYFHLGTLNFLIFK 89

[Close]

BLAST of MS003829 vs. TAIR 10
Match: AT4G27360.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 100.5 bits (249), Expect = 7.3e-22
Identity = 47/89 (52.81%), Postives = 66/89 (74.16%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVV 60
          MLEGK  + +TDM + M+  A++ AS ALD FDV++   +A  IKKEFDR+YG GWQC+V
Sbjct: 1  MLEGKAVMGDTDMKQTMKEDALSLASKALDCFDVTEPTQIARFIKKEFDRSYGSGWQCIV 60

Query: 61 GSNFGSFFTHSTATFIYFALETLNFLIFK 90
          G++FGSF TH +  FI+F++ +L  L+FK
Sbjct: 61 GTHFGSFVTHCSGCFIHFSVGSLTILLFK 89

[Close]

BLAST of MS003829 vs. TAIR 10
Match: AT1G52240.1 (RHO guanyl-nucleotide exchange factor 11 )

HSP 1 Score: 87.4 bits (215), Expect = 6.4e-18
Identity = 41/59 (69.49%), Postives = 46/59 (77.97%), Query Frame = 0


Query: 1  MLEGKGRVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCV 60
          MLEGK  V+++DM  KMQ+ AMA AS ALDLFDV DC S+A HIKKEFD  YG GWQCV
Sbjct: 1  MLEGKAMVEDSDMPVKMQMQAMAFASQALDLFDVFDCKSIAGHIKKEFDERYGSGWQCV 59

[Close]

BLAST of MS003829 vs. TAIR 10
Match: AT5G20110.1 (Dynein light chain type 1 family protein )

HSP 1 Score: 80.1 bits (196), Expect = 1.0e-15
Identity = 39/83 (46.99%), Postives = 51/83 (61.45%), Query Frame = 0


Query: 7   RVKETDMSEKMQIHAMASASHALDLFDVSDCLSLAAHIKKEFDRTYGGGWQCVVGSNFGS 66
           R+   DM   MQ HA   A   LD  +      +A ++KKEFD+ YG  W C+VGS+FGS
Sbjct: 118 RILAADMPGFMQAHAFRCARMTLDSLEKFSSKHMAFNLKKEFDKGYGPAWHCIVGSSFGS 177

Query: 67  FFTHSTATFIYFALETLNFLIFK 90
           F THST  FIYF+++ L  L+FK
Sbjct: 178 FVTHSTGCFIYFSMDKLYVLLFK 200

The following BLAST results are available for this feature:

BLAST of MS003829 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144999.1	9.8e-45	100.00	dynein light chain 1, cytoplasmic-like [Momordica charantia]	[more]
XP_022933771.1	1.3e-36	88.76	dynein light chain 1, cytoplasmic-like [Cucurbita moschata] >XP_022973196.1 dyne...	[more]
XP_038878771.1	1.4e-35	85.71	dynein light chain 1, cytoplasmic-like [Benincasa hispida]	[more]
XP_008462685.1	5.4e-35	84.62	PREDICTED: dynein light chain 1, cytoplasmic-like [Cucumis melo]	[more]
XP_017441827.1	5.4e-35	84.27	PREDICTED: dynein light chain 1, cytoplasmic-like [Vigna angularis] >KAG2411003....	[more]

BLAST of MS003829 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
P61285	2.2e-15	46.07	Dynein light chain 1, cytoplasmic OS=Bos taurus OX=9913 GN=DYNLL1 PE=1 SV=1	[more]
P63167	2.2e-15	46.07	Dynein light chain 1, cytoplasmic OS=Homo sapiens OX=9606 GN=DYNLL1 PE=1 SV=1	[more]
P61273	2.2e-15	46.07	Dynein light chain 1, cytoplasmic OS=Macaca fascicularis OX=9541 GN=DYNLL1 PE=3 ...	[more]
P63168	2.2e-15	46.07	Dynein light chain 1, cytoplasmic OS=Mus musculus OX=10090 GN=Dynll1 PE=1 SV=1	[more]
P63169	2.2e-15	46.07	Dynein light chain 1, cytoplasmic OS=Oryctolagus cuniculus OX=9986 GN=DYNLL1 PE=...	[more]

BLAST of MS003829 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTX2	4.8e-45	100.00	Dynein light chain OS=Momordica charantia OX=3673 GN=LOC111014529 PE=3 SV=1	[more]
A0A6J1I806	6.2e-37	88.76	Dynein light chain OS=Cucurbita maxima OX=3661 GN=LOC111471695 PE=3 SV=1	[more]
A0A6J1EZZ1	6.2e-37	88.76	Dynein light chain OS=Cucurbita moschata OX=3662 GN=LOC111441083 PE=3 SV=1	[more]
A0A1S3UQ79	2.6e-35	84.27	Dynein light chain OS=Vigna radiata var. radiata OX=3916 GN=LOC106767782 PE=3 SV...	[more]
A0A0L9VRV1	2.6e-35	84.27	Dynein light chain OS=Phaseolus angularis OX=3914 GN=LR48_Vigan11g083300 PE=3 SV...	[more]

BLAST of MS003829 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G52240.2	2.7e-32	74.16	RHO guanyl-nucleotide exchange factor 11	[more]
AT3G16120.1	1.0e-31	73.03	Dynein light chain type 1 family protein	[more]
AT4G27360.1	7.3e-22	52.81	Dynein light chain type 1 family protein	[more]
AT1G52240.1	6.4e-18	69.49	RHO guanyl-nucleotide exchange factor 11	[more]
AT5G20110.1	1.0e-15	46.99	Dynein light chain type 1 family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001372	Dynein light chain, type 1/2	SMART	SM01375	Dynein_light_2	coord: 1..90 e-value: 2.3E-41 score: 153.4
IPR001372	Dynein light chain, type 1/2	PFAM	PF01221	Dynein_light	coord: 7..89 e-value: 1.6E-30 score: 105.4
IPR001372	Dynein light chain, type 1/2	PANTHER	PTHR11886	DYNEIN LIGHT CHAIN	coord: 1..90
IPR037177	Dynein light chain superfamily	GENE3D	3.30.740.10	Protein Inhibitor Of Neuronal Nitric Oxide Synthase;	coord: 2..90 e-value: 1.3E-30 score: 107.2
IPR037177	Dynein light chain superfamily	SUPERFAMILY	54648	DLC	coord: 2..90
None	No IPR available	PANTHER	PTHR11886:SF71	DYNEIN LIGHT CHAIN	coord: 1..90

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003829.1	MS003829.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0007017	microtubule-based process
cellular_component	GO:0030286	dynein complex