MS003818 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCCGCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTCATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAATCGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGCTTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCCGCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTCATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAATCGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGCTTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCCGCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTCATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAATCGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGCTTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF Homology
BLAST of MS003818 vs. NCBI nr
Match: XP_022145016.1 (uncharacterized protein LOC111014544 [Momordica charantia]) HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94 Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of MS003818 vs. NCBI nr
Match: XP_038880084.1 (uncharacterized protein LOC120071772 [Benincasa hispida]) HSP 1 Score: 214.2 bits (544), Expect = 9.5e-52 Identity = 120/183 (65.57%), Postives = 142/183 (77.60%), Query Frame = 0
BLAST of MS003818 vs. NCBI nr
Match: XP_022973644.1 (uncharacterized protein LOC111472233 [Cucurbita maxima]) HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51 Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 0
BLAST of MS003818 vs. NCBI nr
Match: KAG6587958.1 (hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021847.1 hypothetical protein SDJN02_15575, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 211.8 bits (538), Expect = 4.7e-51 Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 0
BLAST of MS003818 vs. NCBI nr
Match: XP_022933508.1 (uncharacterized protein LOC111440909 [Cucurbita moschata]) HSP 1 Score: 208.8 bits (530), Expect = 4.0e-50 Identity = 118/185 (63.78%), Postives = 139/185 (75.14%), Query Frame = 0
BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A6J1CV44 (uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014544 PE=4 SV=1) HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94 Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0
BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A6J1IF62 (uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233 PE=4 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 7.9e-52 Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 0
BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A6J1F4Y2 (uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC111440909 PE=4 SV=1) HSP 1 Score: 208.8 bits (530), Expect = 1.9e-50 Identity = 118/185 (63.78%), Postives = 139/185 (75.14%), Query Frame = 0
BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A0A0LTA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G246600 PE=4 SV=1) HSP 1 Score: 205.7 bits (522), Expect = 1.6e-49 Identity = 118/188 (62.77%), Postives = 137/188 (72.87%), Query Frame = 0
BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A1S3CJL1 (uncharacterized protein LOC103501556 OS=Cucumis melo OX=3656 GN=LOC103501556 PE=4 SV=1) HSP 1 Score: 205.3 bits (521), Expect = 2.1e-49 Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 0
BLAST of MS003818 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14 Identity = 60/186 (32.26%), Postives = 102/186 (54.84%), Query Frame = 0
BLAST of MS003818 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 62.0 bits (149), Expect = 5.6e-10 Identity = 54/180 (30.00%), Postives = 85/180 (47.22%), Query Frame = 0
BLAST of MS003818 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08 Identity = 46/173 (26.59%), Postives = 80/173 (46.24%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
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