MS003818 (gene) Bitter gourd (TR) v1

Overview
NameMS003818
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionUnknown protein
Locationscaffold127: 737899 .. 738438 (-)
RNA-Seq ExpressionMS003818
SyntenyMS003818
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCCGCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTCATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAATCGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGCTTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC

mRNA sequence

ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCCGCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTCATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAATCGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGCTTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC

Coding sequence (CDS)

ATGTTGCTGCGAGCCTCCATCTCCAACACGAAGAAGTTCTTCAAAAAAACCATATGCAACTTCAAATCTTTCTTCTCCACTAGCTACCACAGGCTACCCAAGACGCCGCCGCCCTTCGCCGCCGGCCCCCACATGGAAAAAGATTCCACCTTTCAATTCATTTCTTCCCAAAAAGAGGTGCAAAGTGGAGGCTTTATGAAGAACAACAGCAATGCACTTCATTTTCCCAACAAAATGGAGGAGACCCAGATGGAAATCAGAGTAGTCGACAAAAGTTATGGGAGCATGAATAATATCGGAGCGACCCATCAAAGGAAAAGGCAAGAAAATCGCGATCGTGAATCTAGTTCCAAGTATATTATTGATGAGAGGAGAATGTGTTTGGTTGCCAAGAAAATCAAAGAGTTGGAAAAGTTAGACTCGAGAAATGTGGATCATGCTTTGGACATTGAAGAGATTCTCCATTACTACTCTCGCCTCACTTGTCCTGCCTATCTTGAGATTGTTGATAAATTCTTCACCGAGATTTTCGCTGAATTC

Protein sequence

MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
Homology
BLAST of MS003818 vs. NCBI nr
Match: XP_022145016.1 (uncharacterized protein LOC111014544 [Momordica charantia])

HSP 1 Score: 355.1 bits (910), Expect = 3.5e-94
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEV 60
           MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGP MEKDSTFQFISSQKEV
Sbjct: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPRMEKDSTFQFISSQKEV 60

Query: 61  QSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI 120
           QSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI
Sbjct: 61  QSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI 120

Query: 121 IDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF 180
           IDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
Sbjct: 121 IDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF 180

BLAST of MS003818 vs. NCBI nr
Match: XP_038880084.1 (uncharacterized protein LOC120071772 [Benincasa hispida])

HSP 1 Score: 214.2 bits (544), Expect = 9.5e-52
Identity = 120/183 (65.57%), Postives = 142/183 (77.60%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEV 60
           M LRASISNTKKFFKKT+CNFKSFFS SYHRLP+  PPF A   M+KDSTF FI SQ+EV
Sbjct: 1   MFLRASISNTKKFFKKTLCNFKSFFSNSYHRLPEAAPPFLAVSEMDKDSTFHFIPSQQEV 60

Query: 61  QSGGFMKNN--SNALHF-PNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSS 120
           Q+G FMKNN  + ALHF  N M++T+ E   V+K+   +  I ATHQRK QEN +  S  
Sbjct: 61  QNGSFMKNNNPNAALHFSKNTMDQTRKE--RVEKNEDGI-KIEATHQRKTQENLECCSW- 120

Query: 121 KYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIF 180
                +RRMCLVAKK+KELEK+D+RNVDHA+DI+E+LHYYSRLT P +LEIVDKFF +IF
Sbjct: 121 -----KRRMCLVAKKLKELEKVDARNVDHAMDIQEVLHYYSRLTSPTFLEIVDKFFVDIF 174

BLAST of MS003818 vs. NCBI nr
Match: XP_022973644.1 (uncharacterized protein LOC111472233 [Cucurbita maxima])

HSP 1 Score: 213.4 bits (542), Expect = 1.6e-51
Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEV 60
           M L  SIS TKKFFKKTICNFKSFFS +YHRLPK  PPF AGP M KD          EV
Sbjct: 39  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKD----------EV 98

Query: 61  QSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRD---RESS 120
           Q+G F K+N +NA+HF   +++TQM+   V+K+  S+  IGATHQRK QENR+   + S 
Sbjct: 99  QNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KIGATHQRKSQENRESRSKRSR 158

Query: 121 SKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEI 180
             Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF ++
Sbjct: 159 RLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDM 209

BLAST of MS003818 vs. NCBI nr
Match: KAG6587958.1 (hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sororia] >KAG7021847.1 hypothetical protein SDJN02_15575, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 211.8 bits (538), Expect = 4.7e-51
Identity = 119/185 (64.32%), Postives = 140/185 (75.68%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKE 60
           M L  SIS TKKFFKKT+CNFKSFFS +YHRLPK  PPPF AGP M KD          +
Sbjct: 1   MFLLPSISTTKKFFKKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD----------D 60

Query: 61  VQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRD---RES 120
           VQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  IGATHQRK QENR+   + S
Sbjct: 61  VQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KIGATHQRKTQENRESRSKRS 120

Query: 121 SSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTE 180
           S  Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF +
Sbjct: 121 SRLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMD 172

BLAST of MS003818 vs. NCBI nr
Match: XP_022933508.1 (uncharacterized protein LOC111440909 [Cucurbita moschata])

HSP 1 Score: 208.8 bits (530), Expect = 4.0e-50
Identity = 118/185 (63.78%), Postives = 139/185 (75.14%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKE 60
           M L  SIS TKKFF+KT+CNFKSFFS +YHRLPK  PPPF AGP M KD          E
Sbjct: 1   MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD----------E 60

Query: 61  VQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRD---RES 120
           VQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  IGATHQRK QENR+   + S
Sbjct: 61  VQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KIGATHQRKTQENRESRSKRS 120

Query: 121 SSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTE 180
           S  Y  DERR+CLVAKKIKELEKLD+RNV H+LDIEEILHYYSRLTCP YLEIVD FF +
Sbjct: 121 SRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMD 172

BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A6J1CV44 (uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014544 PE=4 SV=1)

HSP 1 Score: 355.1 bits (910), Expect = 1.7e-94
Identity = 179/180 (99.44%), Postives = 179/180 (99.44%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEV 60
           MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGP MEKDSTFQFISSQKEV
Sbjct: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPRMEKDSTFQFISSQKEV 60

Query: 61  QSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI 120
           QSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI
Sbjct: 61  QSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYI 120

Query: 121 IDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF 180
           IDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF
Sbjct: 121 IDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF 180

BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A6J1IF62 (uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233 PE=4 SV=1)

HSP 1 Score: 213.4 bits (542), Expect = 7.9e-52
Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEV 60
           M L  SIS TKKFFKKTICNFKSFFS +YHRLPK  PPF AGP M KD          EV
Sbjct: 39  MFLLPSISTTKKFFKKTICNFKSFFSNTYHRLPKAAPPFTAGPEMAKD----------EV 98

Query: 61  QSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRD---RESS 120
           Q+G F K+N +NA+HF   +++TQM+   V+K+  S+  IGATHQRK QENR+   + S 
Sbjct: 99  QNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KIGATHQRKSQENRESRSKRSR 158

Query: 121 SKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEI 180
             Y  DERR+CLVAKKIKELEKLD+RNVDH+LDIEEILHYYSRLTCP YLEIVD FF ++
Sbjct: 159 RLYEYDERRVCLVAKKIKELEKLDARNVDHSLDIEEILHYYSRLTCPTYLEIVDTFFMDM 209

BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A6J1F4Y2 (uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC111440909 PE=4 SV=1)

HSP 1 Score: 208.8 bits (530), Expect = 1.9e-50
Identity = 118/185 (63.78%), Postives = 139/185 (75.14%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKT-PPPFAAGPHMEKDSTFQFISSQKE 60
           M L  SIS TKKFF+KT+CNFKSFFS +YHRLPK  PPPF AGP M KD          E
Sbjct: 1   MFLLPSISTTKKFFQKTLCNFKSFFSNTYHRLPKAPPPPFTAGPEMAKD----------E 60

Query: 61  VQSGGFMKNN-SNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRD---RES 120
           VQ+G F K+N +NA+HF   +++TQM+   V+K+  S+  IGATHQRK QENR+   + S
Sbjct: 61  VQNGSFTKSNGNNAVHFSKTIDKTQMD--RVEKNEQSI-KIGATHQRKTQENRESRSKRS 120

Query: 121 SSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTE 180
           S  Y  DERR+CLVAKKIKELEKLD+RNV H+LDIEEILHYYSRLTCP YLEIVD FF +
Sbjct: 121 SRLYEYDERRVCLVAKKIKELEKLDARNVHHSLDIEEILHYYSRLTCPTYLEIVDTFFMD 172

BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A0A0LTA6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G246600 PE=4 SV=1)

HSP 1 Score: 205.7 bits (522), Expect = 1.6e-49
Identity = 118/188 (62.77%), Postives = 137/188 (72.87%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPFAAGPHMEKDSTFQFISSQKEV 60
           MLLRA+ISNTKKFF+KT+ NFKSFFS +YHRLPK PPPF A   M+K+STF FISSQ+EV
Sbjct: 1   MLLRATISNTKKFFRKTLWNFKSFFSNTYHRLPKVPPPFPAVSEMDKESTFHFISSQEEV 60

Query: 61  QSGGFMKNNSNALHFPN--------KMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRD 120
           Q+G  MKNN+     PN         M ++Q E   V+KS   M   GATHQRK +EN +
Sbjct: 61  QNGSIMKNNN-----PNAEVRLSTCTMGDSQKE--RVEKSEDRMKT-GATHQRKMEENLE 120

Query: 121 RESSSKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKF 180
                 Y   +RRMCLVAK +KELEKLD+RNVDHALDIEEILHYYSRLT P +LEIVDKF
Sbjct: 121 ------YCSWKRRMCLVAKNMKELEKLDARNVDHALDIEEILHYYSRLTSPTFLEIVDKF 174

BLAST of MS003818 vs. ExPASy TrEMBL
Match: A0A1S3CJL1 (uncharacterized protein LOC103501556 OS=Cucumis melo OX=3656 GN=LOC103501556 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 2.1e-49
Identity = 119/184 (64.67%), Postives = 138/184 (75.00%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFFSTSYHRLPKTPPPF-AAGPHMEKDSTFQFISSQKE 60
           MLLRA+ISNTKKFF+KTI NFKSFFS +YHRLPK PPPF A    M+KDSTF FIS  +E
Sbjct: 39  MLLRATISNTKKFFRKTIWNFKSFFSNTYHRLPKAPPPFPAVVSEMDKDSTFHFISPHEE 98

Query: 61  VQSGGFMKNN--SNALHF-PNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESS 120
           VQ+G FMKNN  + A+H   + M E+QME   V+K+   M  IG THQRK QEN +    
Sbjct: 99  VQNGSFMKNNTPNAAVHLSTSTMGESQME--RVEKNEDRM-KIGGTHQRKMQENLE---- 158

Query: 121 SKYIIDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEI 180
             Y   +RRMCLVAK +KELEKLD+RNVDH LDIEEILHYYSRLT P +LE+VDKF  +I
Sbjct: 159 --YCRWKRRMCLVAKNMKELEKLDARNVDHTLDIEEILHYYSRLTSPTFLEMVDKFVVDI 213

BLAST of MS003818 vs. TAIR 10
Match: AT3G24535.1 (unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 2; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 77.4 bits (189), Expect = 1.3e-14
Identity = 60/186 (32.26%), Postives = 102/186 (54.84%), Query Frame = 0

Query: 1   MLLRASISNTKKFFKKTICNFKSFF--STSYHRLPKTPPPFAAGPHMEKDSTFQFISSQK 60
           M+LR+SISNT+K F+KTI NFKSFF  + +YH+LPKTP            ST    +   
Sbjct: 1   MVLRSSISNTRKLFQKTIDNFKSFFFNNGTYHKLPKTP---------NNTST----NINN 60

Query: 61  EVQSGGFMKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSK 120
           +  +   + ++S+++H          + +   K Y + N   A+  + R  +RD     +
Sbjct: 61  DHPNSNIITSSSSSIH---------KQFQPKPKDYVTTNK--ASSLQPRIGDRD-----E 120

Query: 121 YIIDERRMCLVAKKIKELEKLDSRNV----DHALDIEEILHYYSRLTCPAYLEIVDKFFT 180
            +  + ++ LV  K+KE+EK+ + ++     +  D+ E LH YSRL   AYL++V+ FF 
Sbjct: 121 TLFSQPKVNLVRTKLKEMEKMMNDDIISDEYYVSDVIEFLHCYSRLRYTAYLDVVENFFM 157

BLAST of MS003818 vs. TAIR 10
Match: AT1G15260.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G16070.1); Has 28 Blast hits to 28 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 28; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 62.0 bits (149), Expect = 5.6e-10
Identity = 54/180 (30.00%), Postives = 85/180 (47.22%), Query Frame = 0

Query: 6   SISNTKKFFKKTICNFKS-FFSTSYHRLPKTPP---PFAAGPHMEKDSTFQFISSQKEVQ 65
           SI    +F KKT+ + KS   S+ Y  LP   P   P++      +DS  Q   S   + 
Sbjct: 8   SIQRVGRFLKKTLGSIKSTICSSDYKNLPNDTPLLSPYSCSRRCPEDSQTQTKESYTVI- 67

Query: 66  SGGFMKNNSNALHFPNKMEETQMEIRVVDKSY-GSMNNIGATHQRKRQENRDRESSSKYI 125
                                  +  V D ++  S+NN    H++K ++  +    +K  
Sbjct: 68  ---------------------CCDTAVADTTHQKSLNN---QHKKKPKKVAEPFEDAK-- 127

Query: 126 IDERRMCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFAEF 181
              +R   +A+K+K+L  +D R+VDHALD+ E L  YS +  P YL+IVD FFT+++ EF
Sbjct: 128 ---KRGDALAQKMKDLNMVDLRDVDHALDVREALRCYSSIRSPVYLDIVDNFFTDMYYEF 157

BLAST of MS003818 vs. TAIR 10
Match: AT3G16070.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G15260.1); Has 26 Blast hits to 26 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 26; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 1.1e-08
Identity = 46/173 (26.59%), Postives = 80/173 (46.24%), Query Frame = 0

Query: 10  TKKFFKKTICNFKSFFSTSYHRLPKTPPPFAA----GPHMEKDSTFQFISSQKEVQSGGF 69
           T  FF +T+ + KS    +  +LP+    F+        ++ D+ +    +  E      
Sbjct: 5   TNSFFHRTLHSLKSIIIRAGKKLPRPKTHFSCTFCRSNSLDGDNIYASFLNIWE------ 64

Query: 70  MKNNSNALHFPNKMEETQMEIRVVDKSYGSMNNIGATHQRKRQENRDRESSSKYIIDERR 129
             +  N++  P K+E    E                  Q +  + +  E+ S Y    R 
Sbjct: 65  -SDLENSIEGPLKLEHKVQE------------------QEQYHQVKKTEACSSY--SSRD 124

Query: 130 MCLVAKKIKELEKLDSRNVDHALDIEEILHYYSRLTCPAYLEIVDKFFTEIFA 179
              + KKI E+   ++ +++ ALD+EE LHYYSR++ P YL IVDKFFT++++
Sbjct: 125 CDTMEKKINEMYMTETVDIEQALDVEEALHYYSRISSPVYLNIVDKFFTDLYS 150

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022145016.13.5e-9499.44uncharacterized protein LOC111014544 [Momordica charantia][more]
XP_038880084.19.5e-5265.57uncharacterized protein LOC120071772 [Benincasa hispida][more]
XP_022973644.11.6e-5164.67uncharacterized protein LOC111472233 [Cucurbita maxima][more]
KAG6587958.14.7e-5164.32hypothetical protein SDJN03_16523, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022933508.14.0e-5063.78uncharacterized protein LOC111440909 [Cucurbita moschata][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1CV441.7e-9499.44uncharacterized protein LOC111014544 OS=Momordica charantia OX=3673 GN=LOC111014... [more]
A0A6J1IF627.9e-5264.67uncharacterized protein LOC111472233 OS=Cucurbita maxima OX=3661 GN=LOC111472233... [more]
A0A6J1F4Y21.9e-5063.78uncharacterized protein LOC111440909 OS=Cucurbita moschata OX=3662 GN=LOC1114409... [more]
A0A0A0LTA61.6e-4962.77Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G246600 PE=4 SV=1[more]
A0A1S3CJL12.1e-4964.67uncharacterized protein LOC103501556 OS=Cucumis melo OX=3656 GN=LOC103501556 PE=... [more]
Match NameE-valueIdentityDescription
AT3G24535.11.3e-1432.26unknown protein; Has 28 Blast hits to 27 proteins in 8 species: Archae - 0; Bact... [more]
AT1G15260.15.6e-1030.00unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G16070.11.1e-0826.59unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 97..116
NoneNo IPR availablePANTHERPTHR35461:SF3BNAANNG14610D PROTEINcoord: 1..180
NoneNo IPR availablePANTHERPTHR35461BNAANNG14610D PROTEINcoord: 1..180

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS003818.1MS003818.1mRNA