MS003778 (gene) Bitter gourd (TR) v1

Overview


Name	MS003778
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RING-CH-type domain-containing protein
Location	scaffold127: 384055 .. 386320 (-)
RNA-Seq Expression	MS003778
Synteny	MS003778

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAAAGGGGAAGTACAATTGGATTCGTCAATTGGCCAAAACCCTAGTGACTCTGATCCTCTGCTCGAGAATCAGGCCGATTCATCATCCCATGGAACCTCCGATGAAATCAAGAATGAGGATACTGAAGCTGGTTCCATTCCGTGTTGTCGTATTTGCCTAGAGAGCGATGCAGAACCAGGTGAATTTCGTCGTTTGCTGCGTTGTTAGACATTTATTTTTCTTTCTCGTAAGTTTTTGCTCGGTTAAATTTCTGAGTAGGAGCAATTTAGACGTTGGAATAACTCTGTGGAATTTTAGTTCATTCTATTTTGGGGCCAATACCATTGTTTATTGGTCCACTGGACTGTGGCTTAACTCCCTCTTTGTAACAAGAATTGAAGATAGCATTTCAATTTTTATCTTTGCCCAACCTGGTTTTTCTGCTGCAAAGTGACTTTTGGTATTTAATGTGTATAATCTATAAGTTATGTTTTCATAGCTCGGGTAATACCTTCTTCCACTTGGCTCAAATGCAATTTTCCATTTTACAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGTTAAGGCAAATTTCTTTATTTTAGTTCTTCTACGCTGTTCCTGCTTACGATTATGGAGGATTTGATTGTTTTCTATTCTATTTTCTTTCATTTTAATCAATCTGAAAGAGTTCCCGTATTTCTGCAGGAAGGGTTTGCTTTCTCACATTGCACAACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTGTTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTCTAGCTGTACAAACTGTGAGTTGACTTAAACTTCAGATTTCAGATCATTATTATGGAAGATGCTTCTAAGAAATTCATCTAACCTTTTTTTTCGTCATAAATGTCCCAAGGCTTGTGTTTTTTTATCAAGAAATATAATTACTATTCTTTTTGCCAAACTCCAAGTGACACATCTATAATTTTTATCAAATTGCTATATAGTTATTCAACTTTTAGATTTCAAGCATAGAAGAACTTGATTTTGTTATTTTCAAAATTATGTATTTTTTCTCCAGGCACTCCCACCCTGAGGATTTGTATTAATTTATTTAGAATAAATGTTAGAACATAAAGTTCTTGGACAATCTTGTCTTCTCTTTGATAATTGAGGATTTATCCTTTTTGCAGTTAATAGCTGCAATGGGTGGTTATGCATACATTATGGACAAAGACGGGACATTCAGAAATTCTTTCAGTGATGGATGGGATCGCATTCTGTCGAAACATCCTATTCCATTTTATTATTGTATCGGTAAACTTTTTTTATTTAAACTAATGAGCTTTTTCTATAGAAACTGGTTCTGACACGAACTTTAACTCTGCACTGTTCATTCATGCTTCAGATAAATTGGCAGGGATGCAAAATCTCTCATTTCACTAATATTCATTTTACTGTAGATCGTTGACATGTTGTCAATAACACTCTTTCTCCTGAAAATTATTCGAAATCTCTCATTTAAATTGACTCCTCATCAAAGTCAGCTTCCATTTCAAATTTTAAACTGATGTCTTATATGTATAAATTTCATTGTCTTACAGTTTCTTTCTGAACATTATTGTTATTCTAAATTCCATAGTCTGAAGGGCTATCAGATTAATAATGCGTTATCAATGACTTGTATTTCCTGGTTTTGGTTATTATTTATCTCTTTCTATATGCTTGTTTTTCTCATAACCAGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATCCTGCATTGTTCCTCCCTAAATAGTAACGATCCTCGAGTTGCTGGGTGTCACAACTGTTGCTATGGTTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCGTGCTTCGCACTTGTTATCGTTTTTGTTGTTATCTTTGTCATCCTTGGGATAGCTTACGGTTTCCTTGCTGCCACTATGGCTATTCAAAGGATCTGGCAGAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGTGAGTTTCTAAACGCTGTTGGCTGTTAGTGATTTATGTTTGTGGATTGGATATAATACCTGTGCCACTTTCCTGTAGGAGTACGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAACACTTGAAAATGCTACAACTTCTG

mRNA sequence

ATGAAAGGGGAAGTACAATTGGATTCGTCAATTGGCCAAAACCCTAGTGACTCTGATCCTCTGCTCGAGAATCAGGCCGATTCATCATCCCATGGAACCTCCGATGAAATCAAGAATGAGGATACTGAAGCTGGTTCCATTCCGTGTTGTCGTATTTGCCTAGAGAGCGATGCAGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGAAGGGTTTGCTTTCTCACATTGCACAACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTGTTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCTGCAATGGGTGGTTATGCATACATTATGGACAAAGACGGGACATTCAGAAATTCTTTCAGTGATGGATGGGATCGCATTCTGTCGAAACATCCTATTCCATTTTATTATTGTATCGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATCCTGCATTGTTCCTCCCTAAATAGTAACGATCCTCGAGTTGCTGGGTGTCACAACTGTTGCTATGGTTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCGTGCTTCGCACTTGTTATCGTTTTTGTTGTTATCTTTGTCATCCTTGGGATAGCTTACGGTTTCCTTGCTGCCACTATGGCTATTCAAAGGATCTGGCAGAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAGTACGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAACACTTGAAAATGCTACAACTTCTG

Coding sequence (CDS)

ATGAAAGGGGAAGTACAATTGGATTCGTCAATTGGCCAAAACCCTAGTGACTCTGATCCTCTGCTCGAGAATCAGGCCGATTCATCATCCCATGGAACCTCCGATGAAATCAAGAATGAGGATACTGAAGCTGGTTCCATTCCGTGTTGTCGTATTTGCCTAGAGAGCGATGCAGAACCAGAAGATGAACTGATTTCTCCATGCATGTGCAAAGGCACACAGCAGTTTGTCCATCGATCTTGTCTTGATCATTGGCGCTCCGAAGGGTTTGCTTTCTCACATTGCACAACATGCAAAGCCCAATTTCACCTGAAAGTTTCCTTGTTTGAGGACAACTCTTGGCGTAAAGTTAAATTCAGGCTTTTTGTGGCAAGAGATGTTCTCCTTGTATTTCTAGCTGTACAAACTTTAATAGCTGCAATGGGTGGTTATGCATACATTATGGACAAAGACGGGACATTCAGAAATTCTTTCAGTGATGGATGGGATCGCATTCTGTCGAAACATCCTATTCCATTTTATTATTGTATCGGGGTTCTGGCCTTCTTTGTTCTGCTTGGATTTTTCGGGCTCATCCTGCATTGTTCCTCCCTAAATAGTAACGATCCTCGAGTTGCTGGGTGTCACAACTGTTGCTATGGTTGGGGTATCTTGGATTGTTTCCCTGCATCTATGGAGGCGTGCTTCGCACTTGTTATCGTTTTTGTTGTTATCTTTGTCATCCTTGGGATAGCTTACGGTTTCCTTGCTGCCACTATGGCTATTCAAAGGATCTGGCAGAGGCATTACCACATTCTCACCAAAAGGGAGCTGACTAAAGAGTACGTGGTGGAGGATCTTCACGGTTGTTATACCCCTCCAAAATTGGATCCAGAACATGAACAACACTTGAAAATGCTACAACTTCTG

Protein sequence

MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLKMLQLL

Homology

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BLAST of MS003778 vs. NCBI nr
Match: XP_022144831.1 (uncharacterized protein LOC111014422 [Momordica charantia] >XP_022144833.1 uncharacterized protein LOC111014422 [Momordica charantia] >XP_022144834.1 uncharacterized protein LOC111014422 [Momordica charantia] >XP_022144835.1 uncharacterized protein LOC111014422 [Momordica charantia] >XP_022144836.1 uncharacterized protein LOC111014422 [Momordica charantia])

HSP 1 Score: 616.3 bits (1588), Expect = 1.4e-172
Identity = 302/305 (99.02%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVFLAVQTLIAAM GYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFLAVQTLIAAMSGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

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BLAST of MS003778 vs. NCBI nr
Match: XP_008464996.1 (PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >XP_008464997.1 PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >TYK14507.1 Zinc finger, RING-CH-type [Cucumis melo var. makuwa])

HSP 1 Score: 606.7 bits (1563), Expect = 1.1e-169
Identity = 295/305 (96.72%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQNPSDSDPLLENQ DSSSHGTSDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVF+AVQTLIAA+GGYAYIMDKDG FRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

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BLAST of MS003778 vs. NCBI nr
Match: XP_038878553.1 (uncharacterized protein LOC120070750 [Benincasa hispida])

HSP 1 Score: 605.5 bits (1560), Expect = 2.5e-169
Identity = 295/305 (96.72%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQ+PSDSDPLLENQ DSSSHG SDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQSPSDSDPLLENQTDSSSHGASDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVF+AVQTLIAAMGGYAYIMDKDG FRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFIAVQTLIAAMGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

[Close]

BLAST of MS003778 vs. NCBI nr
Match: XP_004149889.1 (uncharacterized protein LOC101220313 [Cucumis sativus] >XP_011656166.1 uncharacterized protein LOC101220313 [Cucumis sativus] >KGN65293.1 hypothetical protein Csa_019549 [Cucumis sativus])

HSP 1 Score: 604.4 bits (1557), Expect = 5.5e-169
Identity = 295/305 (96.72%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQNPSDSDPLLENQ  SSSHGTSDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNGSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVF+AVQTLIAA+GGYAYIMDKDG FRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

[Close]

BLAST of MS003778 vs. NCBI nr
Match: KAA0046730.1 (Zinc finger, RING-CH-type [Cucumis melo var. makuwa])

HSP 1 Score: 604.4 bits (1557), Expect = 5.5e-169
Identity = 295/311 (94.86%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQNPSDSDPLLENQ DSSSHGTSDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--------EGFAFSHCTTCKAQFHLKVSLFEDN 120
           EDELISPCMCKGTQQFVHRSCLDHWRS        EGFAFSHCTTCKAQFHLKVSLFEDN
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKANFFILEGFAFSHCTTCKAQFHLKVSLFEDN 120

Query: 121 SWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIP 180
           SWRKVKFRLFVARDVLLVF+AVQTLIAA+GGYAYIMDKDG FRNSFSDGWDRILSKHPIP
Sbjct: 121 SWRKVKFRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIP 180

Query: 181 FYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALV 240
           FYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALV
Sbjct: 181 FYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALV 240

Query: 241 IVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPE 300
           IVF+VIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PE
Sbjct: 241 IVFIVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPE 300

Query: 301 HEQHLKMLQLL 304
           HEQHLKMLQLL
Sbjct: 301 HEQHLKMLQLL 311

[Close]

BLAST of MS003778 vs. ExPASy Swiss-Prot
Match: A0JN69 (E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 48  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQF 103
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S     S+C  C  +F
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLSSSNT-SYCELCHFRF 120

[Close]

BLAST of MS003778 vs. ExPASy Swiss-Prot
Match: Q86UD3 (E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 48  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQF 103
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S     S+C  C  +F
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLSSSNT-SYCELCHFRF 120

[Close]

BLAST of MS003778 vs. ExPASy Swiss-Prot
Match: Q8BRX9 (E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 48  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQF 103
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S     S+C  C  +F
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLSSSNT-SYCELCHFRF 120

[Close]

BLAST of MS003778 vs. ExPASy Swiss-Prot
Match: Q5XIE5 (E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=1 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07
Identity = 25/55 (45.45%), Postives = 34/55 (61.82%), Query Frame = 0


Query: 48  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQF 103
           P CRIC E  +  +++L+SPC C GT   +HRSCL+HW S     S+C  C  +F
Sbjct: 69  PMCRICHEGSS--QEDLLSPCECTGTLGTIHRSCLEHWLSSSNT-SYCELCHFRF 120

[Close]

BLAST of MS003778 vs. ExPASy Swiss-Prot
Match: Q0IH10 (E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV=1)

HSP 1 Score: 55.8 bits (133), Expect = 9.6e-07
Identity = 25/58 (43.10%), Postives = 35/58 (60.34%), Query Frame = 0


Query: 48  PCCRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRSEGFAFSHCTTCKAQFHLK 106
           P CRIC E     +++L+SPC C GT   +HRSCL+HW S     S+C  C  +F ++
Sbjct: 68  PMCRICHEGST--QEDLLSPCECTGTLGTIHRSCLEHWLSSSNT-SYCELCHFRFSVE 122

[Close]

BLAST of MS003778 vs. ExPASy TrEMBL
Match: A0A6J1CSS0 (uncharacterized protein LOC111014422 OS=Momordica charantia OX=3673 GN=LOC111014422 PE=4 SV=1)

HSP 1 Score: 616.3 bits (1588), Expect = 6.8e-173
Identity = 302/305 (99.02%), Postives = 302/305 (99.02%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVFLAVQTLIAAM GYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFLAVQTLIAAMSGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

[Close]

BLAST of MS003778 vs. ExPASy TrEMBL
Match: A0A1S3CMV4 (uncharacterized protein LOC103502724 OS=Cucumis melo OX=3656 GN=LOC103502724 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 5.4e-170
Identity = 295/305 (96.72%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQNPSDSDPLLENQ DSSSHGTSDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVF+AVQTLIAA+GGYAYIMDKDG FRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

[Close]

BLAST of MS003778 vs. ExPASy TrEMBL
Match: A0A5D3CRE4 (Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold15G00210 PE=4 SV=1)

HSP 1 Score: 606.7 bits (1563), Expect = 5.4e-170
Identity = 295/305 (96.72%), Postives = 301/305 (98.69%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQNPSDSDPLLENQ DSSSHGTSDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVF+AVQTLIAA+GGYAYIMDKDG FRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVF+VI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFIVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

[Close]

BLAST of MS003778 vs. ExPASy TrEMBL
Match: A0A5A7TUB8 (Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G00100 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 2.7e-169
Identity = 295/311 (94.86%), Postives = 301/311 (96.78%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQNPSDSDPLLENQ DSSSHGTSDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNDSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--------EGFAFSHCTTCKAQFHLKVSLFEDN 120
           EDELISPCMCKGTQQFVHRSCLDHWRS        EGFAFSHCTTCKAQFHLKVSLFEDN
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKANFFILEGFAFSHCTTCKAQFHLKVSLFEDN 120

Query: 121 SWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIP 180
           SWRKVKFRLFVARDVLLVF+AVQTLIAA+GGYAYIMDKDG FRNSFSDGWDRILSKHPIP
Sbjct: 121 SWRKVKFRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIP 180

Query: 181 FYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALV 240
           FYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALV
Sbjct: 181 FYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALV 240

Query: 241 IVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPE 300
           IVF+VIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PE
Sbjct: 241 IVFIVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPE 300

Query: 301 HEQHLKMLQLL 304
           HEQHLKMLQLL
Sbjct: 301 HEQHLKMLQLL 311

[Close]

BLAST of MS003778 vs. ExPASy TrEMBL
Match: A0A0A0LU16 (RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G302200 PE=4 SV=1)

HSP 1 Score: 604.4 bits (1557), Expect = 2.7e-169
Identity = 295/305 (96.72%), Postives = 300/305 (98.36%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDAEP 60
           MKGEVQL+SSIGQNPSDSDPLLENQ  SSSHGTSDEIK+EDTEAGSIPCCRICLESDAEP
Sbjct: 1   MKGEVQLESSIGQNPSDSDPLLENQNGSSSHGTSDEIKDEDTEAGSIPCCRICLESDAEP 60

Query: 61  EDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120
           EDELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK
Sbjct: 61  EDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLKVSLFEDNSWRKVK 120

Query: 121 FRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYCIG 180
           FRLFVARDVLLVF+AVQTLIAA+GGYAYIMDKDG FRNSFSDGWDRILSKHPIPFYYCIG
Sbjct: 121 FRLFVARDVLLVFIAVQTLIAAIGGYAYIMDKDGAFRNSFSDGWDRILSKHPIPFYYCIG 180

Query: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240
           VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI
Sbjct: 181 VLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFVVI 240

Query: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQHLK 300
           FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKL+PEHEQHLK
Sbjct: 241 FVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLEPEHEQHLK 300

Query: 301 MLQLL 304
           MLQLL
Sbjct: 301 MLQLL 305

[Close]

BLAST of MS003778 vs. TAIR 10
Match: AT1G11020.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 480.3 bits (1235), Expect = 1.1e-135
Identity = 246/320 (76.88%), Postives = 267/320 (83.44%), Query Frame = 0


Query: 1   MKGEVQLDSSIGQNPSDSDPLLENQADSSS---------HGTSDEIKNE---DTEAGSIP 60
           M+GEVQL     Q  SDS PLL +  +SSS          G SDEIK E   + +A S P
Sbjct: 2   MQGEVQLQPPDSQKLSDSAPLLGDHTNSSSASPSAASVVAGNSDEIKAEEDLENDASSAP 61

Query: 61  CCRICLESDAE-PEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLK 120
           CCRICLE D+E   DELISPCMCKGTQQFVHRSCLDHWRS  EGFAFSHCTTCKAQFHL+
Sbjct: 62  CCRICLEDDSELLGDELISPCMCKGTQQFVHRSCLDHWRSVKEGFAFSHCTTCKAQFHLR 121

Query: 121 VSLFED-NSW-RKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWD 180
           V  FED NSW RK KFRLFVARDVLLVFLAVQT+IA M G+AY+MDKDG FRNSF+D WD
Sbjct: 122 VEPFEDNNSWRRKAKFRLFVARDVLLVFLAVQTVIAVMAGFAYMMDKDGEFRNSFNDDWD 181

Query: 181 RILSKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPA 240
           RILSKHPIPFYYCIGV++FFVL GF G+ILHCS+LN NDPR+AGC NCCYGWG+LDCFPA
Sbjct: 182 RILSKHPIPFYYCIGVISFFVLTGFLGIILHCSALNGNDPRMAGCQNCCYGWGVLDCFPA 241

Query: 241 SMEACFALVIVFVVIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGC 300
           SMEACFALV+VFVVIF ILG+AYGFLAATMAIQRIWQRHYHILTKRELTKEY+VEDLHG 
Sbjct: 242 SMEACFALVVVFVVIFAILGLAYGFLAATMAIQRIWQRHYHILTKRELTKEYIVEDLHGS 301

Query: 301 YTPPKLDPEHEQHLKMLQLL 304
           YTPPKLD EHE  LKML+LL
Sbjct: 302 YTPPKLDAEHEGRLKMLKLL 321

[Close]

BLAST of MS003778 vs. TAIR 10
Match: AT2G22120.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-53
Identity = 127/300 (42.33%), Postives = 155/300 (51.67%), Query Frame = 0


Query: 50  CRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVS 109
           CRICLE+D     + I+PC CKGT ++VHR CLDHWR+  EGFAF+HCTTCKA ++L+V 
Sbjct: 35  CRICLETDGR---DFIAPCKCKGTSKYVHRDCLDHWRAIKEGFAFAHCTTCKAPYYLRVH 94

Query: 110 LFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRIL- 169
              D  WR +KFR FV RD+L +FLAVQ +IAA+    Y +D       S+   W R + 
Sbjct: 95  SAGDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFID-------SYQQSWLRHIW 154

Query: 170 -SKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHN---CCYGWGILD--- 229
                + FYY  G L FF LLG  G ++ C      +     C     CC   GI     
Sbjct: 155 GFDSEVTFYYMCGALLFFALLGLSGCVITCYDRRVRNDLAQPCRELCLCCCQPGICTDCH 214

Query: 230 -----CFPASMEAC--------------------------FALVIVFVVIFVILGIAYGF 289
                C  A   AC                          F   +V + +F ++GI Y  
Sbjct: 215 LPGTICMWADCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVILGLFTVIGIFYSV 274

Query: 290 LAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYT-----PPKLDPEHEQHLKMLQLL 304
           L ATM  QRIWQRHYHIL KR LTKEYVVED+ G  T     PP L  EH Q LK L LL
Sbjct: 275 LVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPALPTEHVQQLKTLGLL 324

[Close]

BLAST of MS003778 vs. TAIR 10
Match: AT2G22120.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 206.1 bits (523), Expect = 4.1e-53
Identity = 127/300 (42.33%), Postives = 155/300 (51.67%), Query Frame = 0


Query: 50  CRICLESDAEPEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVS 109
           CRICLE+D     + I+PC CKGT ++VHR CLDHWR+  EGFAF+HCTTCKA ++L+V 
Sbjct: 35  CRICLETDGR---DFIAPCKCKGTSKYVHRDCLDHWRAIKEGFAFAHCTTCKAPYYLRVH 94

Query: 110 LFEDNSWRKVKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRIL- 169
              D  WR +KFR FV RD+L +FLAVQ +IAA+    Y +D       S+   W R + 
Sbjct: 95  SAGDRKWRTLKFRFFVTRDILSIFLAVQLVIAALAYMVYFID-------SYQQSWLRHIW 154

Query: 170 -SKHPIPFYYCIGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHN---CCYGWGILD--- 229
                + FYY  G L FF LLG  G ++ C      +     C     CC   GI     
Sbjct: 155 GFDSEVTFYYMCGALLFFALLGLSGCVITCYDRRVRNDLAQPCRELCLCCCQPGICTDCH 214

Query: 230 -----CFPASMEAC--------------------------FALVIVFVVIFVILGIAYGF 289
                C  A   AC                          F   +V + +F ++GI Y  
Sbjct: 215 LPGTICMWADCTACTEGCASAVSECGGCLGGAGEAGLPLLFITALVILGLFTVIGIFYSV 274

Query: 290 LAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYT-----PPKLDPEHEQHLKMLQLL 304
           L ATM  QRIWQRHYHIL KR LTKEYVVED+ G  T     PP L  EH Q LK L LL
Sbjct: 275 LVATMVGQRIWQRHYHILAKRMLTKEYVVEDVDGEMTGSEWSPPALPTEHVQQLKTLGLL 324

[Close]

BLAST of MS003778 vs. TAIR 10
Match: AT1G50440.1 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-33
Identity = 100/306 (32.68%), Postives = 143/306 (46.73%), Query Frame = 0


Query: 2   KGEVQLDSSIGQN---PSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDA 61
           K ++  D S   N    ++    +  +   S    +D+ +     +G  P CRICL+   
Sbjct: 13  KEQILFDESTSSNEIVAAERGDRVVEEGQVSEIAETDDDETTLLVSGDQPQCRICLDVGG 72

Query: 62  EPEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRK 121
           E   +LI+PC CKGTQ+ VHRSCLD+WRS  EGFAFSHCT C+A F L+ ++  D  W +
Sbjct: 73  E---DLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFFKLRANVPADRWWLR 132

Query: 122 VKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYC 181
           ++F+L VARD   +F++VQ ++A +G   Y    +   R  F         +HP  FY  
Sbjct: 133 LRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGE-ELREMFG------YEEHPYGFY-- 192

Query: 182 IGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFV 241
                                                                    + V
Sbjct: 193 --------------------------------------------------------TLAV 249

Query: 242 VIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQH 301
           +  V++G+ YGF  A +  Q+I +RHYH+L K+ELTKEY+VED   C   P+LD  H   
Sbjct: 253 LAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVED-RDCKNVPELDQSHVME 249

Query: 302 LKMLQL 303
           LKML L
Sbjct: 313 LKMLGL 249

[Close]

BLAST of MS003778 vs. TAIR 10
Match: AT1G50440.2 (RING/FYVE/PHD zinc finger superfamily protein )

HSP 1 Score: 140.6 bits (353), Expect = 2.1e-33
Identity = 100/306 (32.68%), Postives = 143/306 (46.73%), Query Frame = 0


Query: 2   KGEVQLDSSIGQN---PSDSDPLLENQADSSSHGTSDEIKNEDTEAGSIPCCRICLESDA 61
           K ++  D S   N    ++    +  +   S    +D+ +     +G  P CRICL+   
Sbjct: 13  KEQILFDESTSSNEIVAAERGDRVVEEGQVSEIAETDDDETTLLVSGDQPQCRICLDVGG 72

Query: 62  EPEDELISPCMCKGTQQFVHRSCLDHWRS--EGFAFSHCTTCKAQFHLKVSLFEDNSWRK 121
           E   +LI+PC CKGTQ+ VHRSCLD+WRS  EGFAFSHCT C+A F L+ ++  D  W +
Sbjct: 73  E---DLIAPCNCKGTQKHVHRSCLDNWRSTKEGFAFSHCTECRAFFKLRANVPADRWWLR 132

Query: 122 VKFRLFVARDVLLVFLAVQTLIAAMGGYAYIMDKDGTFRNSFSDGWDRILSKHPIPFYYC 181
           ++F+L VARD   +F++VQ ++A +G   Y    +   R  F         +HP  FY  
Sbjct: 133 LRFQLLVARDHAFIFISVQMIVAFLGLLVYKFYGE-ELREMFG------YEEHPYGFY-- 192

Query: 182 IGVLAFFVLLGFFGLILHCSSLNSNDPRVAGCHNCCYGWGILDCFPASMEACFALVIVFV 241
                                                                    + V
Sbjct: 193 --------------------------------------------------------TLAV 249

Query: 242 VIFVILGIAYGFLAATMAIQRIWQRHYHILTKRELTKEYVVEDLHGCYTPPKLDPEHEQH 301
           +  V++G+ YGF  A +  Q+I +RHYH+L K+ELTKEY+VED   C   P+LD  H   
Sbjct: 253 LAIVLVGLLYGFFIAIICGQKINERHYHVLAKQELTKEYIVED-RDCKNVPELDQSHVME 249

Query: 302 LKMLQL 303
           LKML L
Sbjct: 313 LKMLGL 249

The following BLAST results are available for this feature:

BLAST of MS003778 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144831.1	1.4e-172	99.02	uncharacterized protein LOC111014422 [Momordica charantia] >XP_022144833.1 uncha...	[more]
XP_008464996.1	1.1e-169	96.72	PREDICTED: uncharacterized protein LOC103502724 [Cucumis melo] >XP_008464997.1 P...	[more]
XP_038878553.1	2.5e-169	96.72	uncharacterized protein LOC120070750 [Benincasa hispida]	[more]
XP_004149889.1	5.5e-169	96.72	uncharacterized protein LOC101220313 [Cucumis sativus] >XP_011656166.1 uncharact...	[more]
KAA0046730.1	5.5e-169	94.86	Zinc finger, RING-CH-type [Cucumis melo var. makuwa]	[more]

BLAST of MS003778 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
A0JN69	9.6e-07	45.45	E3 ubiquitin-protein ligase MARCHF3 OS=Bos taurus OX=9913 GN=MARCHF3 PE=2 SV=1	[more]
Q86UD3	9.6e-07	45.45	E3 ubiquitin-protein ligase MARCHF3 OS=Homo sapiens OX=9606 GN=MARCHF3 PE=1 SV=1	[more]
Q8BRX9	9.6e-07	45.45	E3 ubiquitin-protein ligase MARCHF3 OS=Mus musculus OX=10090 GN=Marchf3 PE=2 SV=...	[more]
Q5XIE5	9.6e-07	45.45	E3 ubiquitin-protein ligase MARCHF3 OS=Rattus norvegicus OX=10116 GN=Marchf3 PE=...	[more]
Q0IH10	9.6e-07	43.10	E3 ubiquitin-protein ligase MARCHF3 OS=Xenopus laevis OX=8355 GN=marchf3 PE=2 SV...	[more]

BLAST of MS003778 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CSS0	6.8e-173	99.02	uncharacterized protein LOC111014422 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A1S3CMV4	5.4e-170	96.72	uncharacterized protein LOC103502724 OS=Cucumis melo OX=3656 GN=LOC103502724 PE=...	[more]
A0A5D3CRE4	5.4e-170	96.72	Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffo...	[more]
A0A5A7TUB8	2.7e-169	94.86	Zinc finger, RING-CH-type OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffo...	[more]
A0A0A0LU16	2.7e-169	96.72	RING-CH-type domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_1G30220...	[more]

BLAST of MS003778 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G11020.1	1.1e-135	76.88	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.1	4.1e-53	42.33	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT2G22120.2	4.1e-53	42.33	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.1	2.1e-33	32.68	RING/FYVE/PHD zinc finger superfamily protein	[more]
AT1G50440.2	2.1e-33	32.68	RING/FYVE/PHD zinc finger superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011016	Zinc finger, RING-CH-type	SMART	SM00744	ringv_2	coord: 49..99 e-value: 8.9E-16 score: 68.4
IPR011016	Zinc finger, RING-CH-type	PFAM	PF12906	RINGv	coord: 50..98 e-value: 1.0E-12 score: 48.0
IPR011016	Zinc finger, RING-CH-type	PROSITE	PS51292	ZF_RING_CH	coord: 42..105 score: 21.626318
IPR013083	Zinc finger, RING/FYVE/PHD-type	GENE3D	3.30.40.10	Zinc/RING finger domain, C3HC4 (zinc finger)	coord: 33..112 e-value: 5.9E-18 score: 66.2
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..41
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 7..32
None	No IPR available	PANTHER	PTHR46347	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..303
None	No IPR available	PANTHER	PTHR46347:SF4	RING/FYVE/PHD ZINC FINGER SUPERFAMILY PROTEIN	coord: 1..303
None	No IPR available	CDD	cd16495	RING_CH-C4HC3_MARCH	coord: 50..99 e-value: 4.4488E-19 score: 77.3676
None	No IPR available	SUPERFAMILY	57850	RING/U-box	coord: 48..103

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003778.1	MS003778.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0008270	zinc ion binding