MS003743 (gene) Bitter gourd (TR) v1

Overview


Name	MS003743
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ethylene-responsive transcription factor WIN1-like
Location	scaffold127: 136057 .. 136777 (+)
RNA-Seq Expression	MS003743
Synteny	MS003743

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCCAAATTAAAGAAGTTCAGAGGTGTCAGACAGCGCCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCATTACTGTAATTCTGATTATTCTTCTTCTTCCATTTAAATACATTATTCTCTTACTTGTTATTACTATGATCAATTCATAATTCAATTCAATTGTGAGTAAAGATTTGCTTTGAGGACCCTCTGCAGGAAGAGGAGGATATGGCTGGGAACGTTCGAGACCGCGGAGGAAGCGGCGAGAGCGTACGATGAGGCCGCGGTCTTGATGAGTGGTCGAAACGCCAAAACCAACTTTCCCACGGCCCAAGCTCCCGATGGAGACACCCACATTGTCCCAACCAAGGATGATGCGCCCAAGGGCTTGTCCCAAATGCTGCAGGCCAAGCTCAAGAAATGGCGCTGCCGTGCCCCGTCCCCGTCGATGACTTGCTTGAGGCTCGACACTGAGAACTCGAACATCGGCGTGTGGCACAAGTGTGCCGGGCAGCAGTCGGCTTCAAACTGGGTCATGACTGTCGAGCTTGGAAATAGCAACAACAAGAACCATGTTGTCCATGGCAATGCAGATTCTCCGACCGGGGCTGTGGTGGCTTGCGATCAGTCTCGAGCCACTGCAGTGGCAGCGTCGTCGGAGATTCGATCGGAGTTGGATGAAGAAGAGAGAATGGTGGCGTTGCAAATGGTGGAGGAACTGCTTCACATCAATTGT

mRNA sequence

ATGGCCAAATTAAAGAAGTTCAGAGGTGTCAGACAGCGCCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCATTACTGAAGAGGAGGATATGGCTGGGAACGTTCGAGACCGCGGAGGAAGCGGCGAGAGCGTACGATGAGGCCGCGGTCTTGATGAGTGGTCGAAACGCCAAAACCAACTTTCCCACGGCCCAAGCTCCCGATGGAGACACCCACATTGTCCCAACCAAGGATGATGCGCCCAAGGGCTTGTCCCAAATGCTGCAGGCCAAGCTCAAGAAATGGCGCTGCCGTGCCCCGTCCCCGTCGATGACTTGCTTGAGGCTCGACACTGAGAACTCGAACATCGGCGTGTGGCACAAGTGTGCCGGGCAGCAGTCGGCTTCAAACTGGGTCATGACTGTCGAGCTTGGAAATAGCAACAACAAGAACCATGTTGTCCATGGCAATGCAGATTCTCCGACCGGGGCTGTGGTGGCTTGCGATCAGTCTCGAGCCACTGCAGTGGCAGCGTCGTCGGAGATTCGATCGGAGTTGGATGAAGAAGAGAGAATGGTGGCGTTGCAAATGGTGGAGGAACTGCTTCACATCAATTGT

Coding sequence (CDS)

ATGGCCAAATTAAAGAAGTTCAGAGGTGTCAGACAGCGCCATTGGGGCTCTTGGGTTTCTGAAATTCGACACCCATTACTGAAGAGGAGGATATGGCTGGGAACGTTCGAGACCGCGGAGGAAGCGGCGAGAGCGTACGATGAGGCCGCGGTCTTGATGAGTGGTCGAAACGCCAAAACCAACTTTCCCACGGCCCAAGCTCCCGATGGAGACACCCACATTGTCCCAACCAAGGATGATGCGCCCAAGGGCTTGTCCCAAATGCTGCAGGCCAAGCTCAAGAAATGGCGCTGCCGTGCCCCGTCCCCGTCGATGACTTGCTTGAGGCTCGACACTGAGAACTCGAACATCGGCGTGTGGCACAAGTGTGCCGGGCAGCAGTCGGCTTCAAACTGGGTCATGACTGTCGAGCTTGGAAATAGCAACAACAAGAACCATGTTGTCCATGGCAATGCAGATTCTCCGACCGGGGCTGTGGTGGCTTGCGATCAGTCTCGAGCCACTGCAGTGGCAGCGTCGTCGGAGATTCGATCGGAGTTGGATGAAGAAGAGAGAATGGTGGCGTTGCAAATGGTGGAGGAACTGCTTCACATCAATTGT

Protein sequence

MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVWHKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSELDEEERMVALQMVEELLHINC

Homology

[Close]

BLAST of MS003743 vs. NCBI nr
Match: XP_022145015.1 (ethylene-responsive transcription factor WIN1-like [Momordica charantia])

HSP 1 Score: 405.6 bits (1041), Expect = 2.5e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
Sbjct: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120
           NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW
Sbjct: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120

Query: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180
           HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL
Sbjct: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180

Query: 181 DEEERMVALQMVEELLHINC 201
           DEEERMVALQMVEELLHINC
Sbjct: 181 DEEERMVALQMVEELLHINC 200

[Close]

BLAST of MS003743 vs. NCBI nr
Match: XP_038879891.1 (ethylene-responsive transcription factor WIN1-like [Benincasa hispida])

HSP 1 Score: 278.9 bits (712), Expect = 3.5e-71
Identity = 151/206 (73.30%), Postives = 167/206 (81.07%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAA+AYD+AAVLM GRNAKT
Sbjct: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAAKAYDQAAVLMCGRNAKT 60

Query: 61  NFPTAQAPDGD---THIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNI 120
           NFPT    +GD    + + T  D+PKGLS++LQAKLKK  CR PSPSMTCLRLDTENSNI
Sbjct: 61  NFPTTPL-NGDHTNNNTITTTKDSPKGLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNI 120

Query: 121 GVWHKCAGQQSASNWVMTVELGN----SNNKNHVVHGNADSPTGAVVACDQSRATAVAAS 180
           GVW K AGQ+SASNWVMTVELGN     NN N+  +GN DSP  AVVA D    + VA +
Sbjct: 121 GVWQKRAGQRSASNWVMTVELGNKKRLDNNNNNGDNGNVDSPMAAVVASDHQ--STVAEA 180

Query: 181 SEIRSELDEEERMVALQMVEELLHIN 200
           +EI SELDEEE+M+ALQMVEELLHIN
Sbjct: 181 AEIPSELDEEEKMLALQMVEELLHIN 202

[Close]

BLAST of MS003743 vs. NCBI nr
Match: XP_008443999.1 (PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo])

HSP 1 Score: 270.8 bits (691), Expect = 9.5e-69
Identity = 149/205 (72.68%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AA+AYD+AAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPTAQAPDGDT--HIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIG 120
           NFPT+ + +G+T  +I  T  D+PKGLS++LQAKLKK  CR PSPSMTCLRLDTENSNIG
Sbjct: 61  NFPTSSS-NGETINNIDTTTKDSPKGLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNIG 120

Query: 121 VWHKCAGQQSASNWVMTVELGN----SNNKNHVVHGNADSPTGAVVACDQSRATAVAASS 180
           VW K AGQQS SNWVMTVELGN    SN   +    NADS   AVVA D  ++  V   +
Sbjct: 121 VWQKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEV-A 180

Query: 181 EIRSELDEEERMVALQMVEELLHIN 200
           EI SELDEEE+M+ALQMVEELLHIN
Sbjct: 181 EIPSELDEEEKMLALQMVEELLHIN 202

[Close]

BLAST of MS003743 vs. NCBI nr
Match: TYK06434.1 (ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa])

HSP 1 Score: 269.2 bits (687), Expect = 2.8e-68
Identity = 148/205 (72.20%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AA+AYD+AAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPTAQAPDGDT--HIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIG 120
           NFPT+ + +G+T  +I  T  D+PKGLS++LQAKLKK  CR PSPSMTCLRLDTENSNIG
Sbjct: 61  NFPTSSS-NGETINNIDTTTKDSPKGLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNIG 120

Query: 121 VWHKCAGQQSASNWVMTVELGN----SNNKNHVVHGNADSPTGAVVACDQSRATAVAASS 180
           VW K AGQQS SNWVMTVELGN    SN   +    NADS   AVVA D  ++  V   +
Sbjct: 121 VWQKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEV-A 180

Query: 181 EIRSELDEEERMVALQMVEELLHIN 200
           EI SELDEEE+M+ LQMVEELLHIN
Sbjct: 181 EIPSELDEEEKMLTLQMVEELLHIN 202

[Close]

BLAST of MS003743 vs. NCBI nr
Match: XP_023531753.1 (ethylene-responsive transcription factor WIN1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 268.9 bits (686), Expect = 3.6e-68
Identity = 148/199 (74.37%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYD+AA+LMSGRNAKT
Sbjct: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120
           NFPT      DT+I  TK D+PKGLS++LQAKLKK  CR PSPSMTCLRLDTENSNIGVW
Sbjct: 61  NFPTTH----DTNITTTK-DSPKGLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180
            K AG +SAS+WVMTVELGN  +     H N D     VV  DQS   A  A  EI SEL
Sbjct: 121 QKRAGPRSASSWVMTVELGNKKS-----HNNEDDSLMGVVVADQSPVAAEVA--EIPSEL 180

Query: 181 DEEERMVALQMVEELLHIN 200
           DEEERMVALQMVEELLHI+
Sbjct: 181 DEEERMVALQMVEELLHIS 186

[Close]

BLAST of MS003743 vs. ExPASy Swiss-Prot
Match: Q9XI33 (Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN=WIN1 PE=2 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 2.9e-52
Identity = 119/208 (57.21%), Postives = 144/208 (69.23%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWV+EIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFP-----TAQAPDGDTHI----VPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLD 120
           NFP     T +  +G T I      +   +   LS +L AKL+K  C++PSPS+TCLRLD
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC-CKSPSPSLTCLRLD 120

Query: 121 TENSNIGVWHKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVA 180
           T +S+IGVW K AG +S S+WVMTVELG +++        + +   A++A      T V 
Sbjct: 121 TASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQET---TSKASQDAILA----PTTEVE 180

Query: 181 ASSEIRSELDEEERMVALQMVEELLHIN 200
                   LDEEE+ VALQM+EELL+ N
Sbjct: 181 IGGSREEVLDEEEK-VALQMIEELLNTN 199

[Close]

BLAST of MS003743 vs. ExPASy Swiss-Prot
Match: Q9LFN7 (Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702 GN=SHN2 PE=2 SV=1)

HSP 1 Score: 188.3 bits (477), Expect = 8.2e-47
Identity = 101/199 (50.75%), Postives = 135/199 (67.84%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M   +KFRGVRQR WGSWVSEIRHPLLKRR+WLGTFETAE AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDD--APKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIG 120
           NFP  ++ +G  H+        +PK LS++L AKL+K  C+  +PS+TCLRLDT++S+IG
Sbjct: 61  NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK-SCKDLTPSLTCLRLDTDSSHIG 120

Query: 121 VWHKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRS 180
           VW K AG +++  WVM +ELGN  N++ V         G      Q+    V    E   
Sbjct: 121 VWQKRAGSKTSPTWVMRLELGNVVNESAV-------DLGLTTMNKQN----VEKEEEEEE 180

Query: 181 ELDEEERMVALQMVEELLH 198
            +  +E  +A++M+EELL+
Sbjct: 181 AIISDEDQLAMEMIEELLN 187

[Close]

BLAST of MS003743 vs. ExPASy Swiss-Prot
Match: Q3E958 (Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702 GN=SHN3 PE=2 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 3.4e-45
Identity = 98/200 (49.00%), Postives = 134/200 (67.00%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M   KKFRGVRQR WGSWVSEIRHPLLKRR+WLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120
           NFP  ++   ++  + +   +PK LS++L AKL+K  C+  +P +TCLRLD ++S+IGVW
Sbjct: 61  NFPVIKSNGSNSLEINSALRSPKSLSELLNAKLRK-NCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180
            K AG +++ NWV  VELG+  N           P G +               ++R+E 
Sbjct: 121 QKRAGSKTSPNWVKLVELGDKVNAR---------PGGDI----------ETNKMKVRNED 180

Query: 181 DEEERMVALQMVEELLHINC 201
            +E+  +A+QM+EELL+  C
Sbjct: 181 VQEDDQMAMQMIEELLNWTC 180

[Close]

BLAST of MS003743 vs. ExPASy Swiss-Prot
Match: Q94AW5 (Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 GN=ERF003 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 1.5e-24
Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPT 64
           ++FRGVRQRHWGSWVSEIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 65  AQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMT 107
                 + + +PT   + K LS  L AKL K  C   S  MT
Sbjct: 66  ------NPNAIPT--SSSKLLSATLTAKLHK--CYMASLQMT 97

[Close]

BLAST of MS003743 vs. ExPASy Swiss-Prot
Match: P16146 (Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 2.9e-20
Identity = 57/102 (55.88%), Postives = 68/102 (66.67%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPT 64
           +++RG RQRHWGSWVSEIRH +LK RIW GTFE+AE+AARAYDEAA LM G  A+TNFP 
Sbjct: 6   QRYRGFRQRHWGSWVSEIRHSILKTRIWQGTFESAEDAARAYDEAARLMCGTRARTNFP- 65

Query: 65  AQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMT 107
              P+       ++  + K LS  L AKL   RC   S  MT
Sbjct: 66  -YNPNA------SQSSSSKLLSATLIAKLH--RCYMASLQMT 97

[Close]

BLAST of MS003743 vs. ExPASy TrEMBL
Match: A0A6J1CT97 (ethylene-responsive transcription factor WIN1-like OS=Momordica charantia OX=3673 GN=LOC111014543 PE=4 SV=1)

HSP 1 Score: 405.6 bits (1041), Expect = 1.2e-109
Identity = 200/200 (100.00%), Postives = 200/200 (100.00%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
Sbjct: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120
           NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW
Sbjct: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120

Query: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180
           HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL
Sbjct: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180

Query: 181 DEEERMVALQMVEELLHINC 201
           DEEERMVALQMVEELLHINC
Sbjct: 181 DEEERMVALQMVEELLHINC 200

[Close]

BLAST of MS003743 vs. ExPASy TrEMBL
Match: A0A1S3BA41 (ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LOC103487449 PE=4 SV=1)

HSP 1 Score: 270.8 bits (691), Expect = 4.6e-69
Identity = 149/205 (72.68%), Postives = 166/205 (80.98%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AA+AYD+AAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPTAQAPDGDT--HIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIG 120
           NFPT+ + +G+T  +I  T  D+PKGLS++LQAKLKK  CR PSPSMTCLRLDTENSNIG
Sbjct: 61  NFPTSSS-NGETINNIDTTTKDSPKGLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNIG 120

Query: 121 VWHKCAGQQSASNWVMTVELGN----SNNKNHVVHGNADSPTGAVVACDQSRATAVAASS 180
           VW K AGQQS SNWVMTVELGN    SN   +    NADS   AVVA D  ++  V   +
Sbjct: 121 VWQKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEV-A 180

Query: 181 EIRSELDEEERMVALQMVEELLHIN 200
           EI SELDEEE+M+ALQMVEELLHIN
Sbjct: 181 EIPSELDEEEKMLALQMVEELLHIN 202

[Close]

BLAST of MS003743 vs. ExPASy TrEMBL
Match: A0A5D3C530 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001380 PE=4 SV=1)

HSP 1 Score: 269.2 bits (687), Expect = 1.3e-68
Identity = 148/205 (72.20%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AA+AYD+AAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPTAQAPDGDT--HIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIG 120
           NFPT+ + +G+T  +I  T  D+PKGLS++LQAKLKK  CR PSPSMTCLRLDTENSNIG
Sbjct: 61  NFPTSSS-NGETINNIDTTTKDSPKGLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNIG 120

Query: 121 VWHKCAGQQSASNWVMTVELGN----SNNKNHVVHGNADSPTGAVVACDQSRATAVAASS 180
           VW K AGQQS SNWVMTVELGN    SN   +    NADS   AVVA D  ++  V   +
Sbjct: 121 VWQKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEV-A 180

Query: 181 EIRSELDEEERMVALQMVEELLHIN 200
           EI SELDEEE+M+ LQMVEELLHIN
Sbjct: 181 EIPSELDEEEKMLTLQMVEELLHIN 202

[Close]

BLAST of MS003743 vs. ExPASy TrEMBL
Match: A0A6J1F021 (ethylene-responsive transcription factor WIN1-like OS=Cucurbita moschata OX=3662 GN=LOC111440941 PE=4 SV=1)

HSP 1 Score: 268.9 bits (686), Expect = 1.8e-68
Identity = 148/199 (74.37%), Postives = 158/199 (79.40%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYD+AA+LMSGRNAKT
Sbjct: 1   MPKFKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDQAAILMSGRNAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120
           NFPT      DT+I  TK D+PKGLS++LQAKLKK  CR PSPSMTCLRLDTENSNIGVW
Sbjct: 61  NFPTTH----DTNITTTK-DSPKGLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNIGVW 120

Query: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180
            K AG +SAS+WVMTVELGN  +     H N D     VV  DQS   A  A  EI SEL
Sbjct: 121 QKRAGPRSASSWVMTVELGNKKS-----HNNEDDSLMGVVVADQSPVAAEVA--EIPSEL 180

Query: 181 DEEERMVALQMVEELLHIN 200
           DEEERMVALQMVEELLHI+
Sbjct: 181 DEEERMVALQMVEELLHIS 186

[Close]

BLAST of MS003743 vs. ExPASy TrEMBL
Match: A0A5A7TUK2 (Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold216G001140 PE=4 SV=1)

HSP 1 Score: 268.1 bits (684), Expect = 3.0e-68
Identity = 148/205 (72.20%), Postives = 165/205 (80.49%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M K KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAE+AA+AYD+AAVLMSGRNAKT
Sbjct: 1   MPKCKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEQAAKAYDQAAVLMSGRNAKT 60

Query: 61  NFPTAQAPDGDT--HIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIG 120
           NFPT+ + +G+T  +I  T  D+PK LS++LQAKLKK  CR PSPSMTCLRLDTENSNIG
Sbjct: 61  NFPTSSS-NGETINNIDTTTKDSPKDLSEILQAKLKKC-CRTPSPSMTCLRLDTENSNIG 120

Query: 121 VWHKCAGQQSASNWVMTVELGN----SNNKNHVVHGNADSPTGAVVACDQSRATAVAASS 180
           VW K AGQQS SNWVMTVELGN    SN   +    NADS   AVVA D  ++  V   +
Sbjct: 121 VWQKRAGQQSTSNWVMTVELGNKKRLSNENENENDNNADSDMMAVVASDHHQSPVVEV-A 180

Query: 181 EIRSELDEEERMVALQMVEELLHIN 200
           EI SELDEEE+M+ALQMVEELLHIN
Sbjct: 181 EIPSELDEEEKMLALQMVEELLHIN 202

[Close]

BLAST of MS003743 vs. TAIR 10
Match: AT1G15360.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 206.5 bits (524), Expect = 2.1e-53
Identity = 119/208 (57.21%), Postives = 144/208 (69.23%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M + KKFRGVRQRHWGSWV+EIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT
Sbjct: 1   MVQTKKFRGVRQRHWGSWVAEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60

Query: 61  NFP-----TAQAPDGDTHI----VPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLD 120
           NFP     T +  +G T I      +   +   LS +L AKL+K  C++PSPS+TCLRLD
Sbjct: 61  NFPLNNNNTGETSEGKTDISASSTMSSSTSSSSLSSILSAKLRKC-CKSPSPSLTCLRLD 120

Query: 121 TENSNIGVWHKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVA 180
           T +S+IGVW K AG +S S+WVMTVELG +++        + +   A++A      T V 
Sbjct: 121 TASSHIGVWQKRAGSKSDSSWVMTVELGPASSSQET---TSKASQDAILA----PTTEVE 180

Query: 181 ASSEIRSELDEEERMVALQMVEELLHIN 200
                   LDEEE+ VALQM+EELL+ N
Sbjct: 181 IGGSREEVLDEEEK-VALQMIEELLNTN 199

[Close]

BLAST of MS003743 vs. TAIR 10
Match: AT5G11190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 188.3 bits (477), Expect = 5.8e-48
Identity = 101/199 (50.75%), Postives = 135/199 (67.84%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M   +KFRGVRQR WGSWVSEIRHPLLKRR+WLGTFETAE AARAYD+AA+LM+G+NAKT
Sbjct: 1   MVHSRKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFETAEAAARAYDQAALLMNGQNAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDD--APKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIG 120
           NFP  ++ +G  H+        +PK LS++L AKL+K  C+  +PS+TCLRLDT++S+IG
Sbjct: 61  NFPVVKSEEGSDHVKDVNSPLMSPKSLSELLNAKLRK-SCKDLTPSLTCLRLDTDSSHIG 120

Query: 121 VWHKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRS 180
           VW K AG +++  WVM +ELGN  N++ V         G      Q+    V    E   
Sbjct: 121 VWQKRAGSKTSPTWVMRLELGNVVNESAV-------DLGLTTMNKQN----VEKEEEEEE 180

Query: 181 ELDEEERMVALQMVEELLH 198
            +  +E  +A++M+EELL+
Sbjct: 181 AIISDEDQLAMEMIEELLN 187

[Close]

BLAST of MS003743 vs. TAIR 10
Match: AT5G25390.2 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 183.0 bits (463), Expect = 2.4e-46
Identity = 98/200 (49.00%), Postives = 134/200 (67.00%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M   KKFRGVRQR WGSWVSEIRHPLLKRR+WLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLLKRRVWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120
           NFP  ++   ++  + +   +PK LS++L AKL+K  C+  +P +TCLRLD ++S+IGVW
Sbjct: 61  NFPVIKSNGSNSLEINSALRSPKSLSELLNAKLRK-NCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180
            K AG +++ NWV  VELG+  N           P G +               ++R+E 
Sbjct: 121 QKRAGSKTSPNWVKLVELGDKVNAR---------PGGDI----------ETNKMKVRNED 180

Query: 181 DEEERMVALQMVEELLHINC 201
            +E+  +A+QM+EELL+  C
Sbjct: 181 VQEDDQMAMQMIEELLNWTC 180

[Close]

BLAST of MS003743 vs. TAIR 10
Match: AT5G25390.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 172.2 bits (435), Expect = 4.3e-43
Identity = 95/200 (47.50%), Postives = 131/200 (65.50%), Query Frame = 0


Query: 1   MAKLKKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKT 60
           M   KKFRGVRQR WGSWVSEIRHPLL   +WLGTF+TAE AARAYD+AAVLM+G++AKT
Sbjct: 1   MVHSKKFRGVRQRQWGSWVSEIRHPLL---VWLGTFDTAETAARAYDQAAVLMNGQSAKT 60

Query: 61  NFPTAQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMTCLRLDTENSNIGVW 120
           NFP  ++   ++  + +   +PK LS++L AKL+K  C+  +P +TCLRLD ++S+IGVW
Sbjct: 61  NFPVIKSNGSNSLEINSALRSPKSLSELLNAKLRK-NCKDQTPYLTCLRLDNDSSHIGVW 120

Query: 121 HKCAGQQSASNWVMTVELGNSNNKNHVVHGNADSPTGAVVACDQSRATAVAASSEIRSEL 180
            K AG +++ NWV  VELG+  N           P G +               ++R+E 
Sbjct: 121 QKRAGSKTSPNWVKLVELGDKVNAR---------PGGDI----------ETNKMKVRNED 177

Query: 181 DEEERMVALQMVEELLHINC 201
            +E+  +A+QM+EELL+  C
Sbjct: 181 VQEDDQMAMQMIEELLNWTC 177

[Close]

BLAST of MS003743 vs. TAIR 10
Match: AT5G25190.1 (Integrase-type DNA-binding superfamily protein )

HSP 1 Score: 114.4 bits (285), Expect = 1.1e-25
Identity = 64/102 (62.75%), Postives = 72/102 (70.59%), Query Frame = 0


Query: 5   KKFRGVRQRHWGSWVSEIRHPLLKRRIWLGTFETAEEAARAYDEAAVLMSGRNAKTNFPT 64
           ++FRGVRQRHWGSWVSEIRHPLLK RIWLGTFETAE+AARAYDEAA LM G  A+TNFP 
Sbjct: 6   QRFRGVRQRHWGSWVSEIRHPLLKTRIWLGTFETAEDAARAYDEAARLMCGPRARTNFPY 65

Query: 65  AQAPDGDTHIVPTKDDAPKGLSQMLQAKLKKWRCRAPSPSMT 107
                 + + +PT   + K LS  L AKL K  C   S  MT
Sbjct: 66  ------NPNAIPT--SSSKLLSATLTAKLHK--CYMASLQMT 97

The following BLAST results are available for this feature:

BLAST of MS003743 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022145015.1	2.5e-109	100.00	ethylene-responsive transcription factor WIN1-like [Momordica charantia]	[more]
XP_038879891.1	3.5e-71	73.30	ethylene-responsive transcription factor WIN1-like [Benincasa hispida]	[more]
XP_008443999.1	9.5e-69	72.68	PREDICTED: ethylene-responsive transcription factor WIN1-like [Cucumis melo]	[more]
TYK06434.1	2.8e-68	72.20	ethylene-responsive transcription factor WIN1-like [Cucumis melo var. makuwa]	[more]
XP_023531753.1	3.6e-68	74.37	ethylene-responsive transcription factor WIN1-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS003743 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9XI33	2.9e-52	57.21	Ethylene-responsive transcription factor WIN1 OS=Arabidopsis thaliana OX=3702 GN...	[more]
Q9LFN7	8.2e-47	50.75	Ethylene-responsive transcription factor SHINE 2 OS=Arabidopsis thaliana OX=3702...	[more]
Q3E958	3.4e-45	49.00	Ethylene-responsive transcription factor SHINE 3 OS=Arabidopsis thaliana OX=3702...	[more]
Q94AW5	1.5e-24	62.75	Ethylene-responsive transcription factor ERF003 OS=Arabidopsis thaliana OX=3702 ...	[more]
P16146	2.9e-20	55.88	Protein PPLZ02 OS=Lupinus polyphyllus OX=3874 GN=PPLZ02 PE=2 SV=1	[more]

BLAST of MS003743 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CT97	1.2e-109	100.00	ethylene-responsive transcription factor WIN1-like OS=Momordica charantia OX=367...	[more]
A0A1S3BA41	4.6e-69	72.68	ethylene-responsive transcription factor WIN1-like OS=Cucumis melo OX=3656 GN=LO...	[more]
A0A5D3C530	1.3e-68	72.20	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]
A0A6J1F021	1.8e-68	74.37	ethylene-responsive transcription factor WIN1-like OS=Cucurbita moschata OX=3662...	[more]
A0A5A7TUK2	3.0e-68	72.20	Ethylene-responsive transcription factor WIN1-like OS=Cucumis melo var. makuwa O...	[more]

BLAST of MS003743 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G15360.1	2.1e-53	57.21	Integrase-type DNA-binding superfamily protein	[more]
AT5G11190.1	5.8e-48	50.75	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.2	2.4e-46	49.00	Integrase-type DNA-binding superfamily protein	[more]
AT5G25390.1	4.3e-43	47.50	Integrase-type DNA-binding superfamily protein	[more]
AT5G25190.1	1.1e-25	62.75	Integrase-type DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001471	AP2/ERF domain	PRINTS	PR00367	ETHRSPELEMNT	coord: 7..18 score: 61.21 coord: 29..45 score: 71.66
IPR001471	AP2/ERF domain	SMART	SM00380	rav1_2	coord: 6..69 e-value: 9.1E-39 score: 144.8
IPR001471	AP2/ERF domain	PFAM	PF00847	AP2	coord: 6..50 e-value: 4.5E-12 score: 46.0
IPR001471	AP2/ERF domain	PROSITE	PS51032	AP2_ERF	coord: 6..63 score: 21.812126
IPR001471	AP2/ERF domain	CDD	cd00018	AP2	coord: 5..65 e-value: 6.80401E-34 score: 113.135
IPR036955	AP2/ERF domain superfamily	GENE3D	3.30.730.10	AP2/ERF domain	coord: 5..65 e-value: 1.8E-26 score: 94.0
None	No IPR available	PANTHER	PTHR31194:SF49	AP2-EREBP TRANSCRIPTION FACTOR	coord: 1..200
None	No IPR available	PANTHER	PTHR31194	SHN SHINE , DNA BINDING / TRANSCRIPTION FACTOR	coord: 1..200
IPR016177	DNA-binding domain superfamily	SUPERFAMILY	54171	DNA-binding domain	coord: 6..64

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003743.1	MS003743.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0006355	regulation of transcription, DNA-templated
molecular_function	GO:0003677	DNA binding
molecular_function	GO:0003700	DNA-binding transcription factor activity