MS003740 (gene) Bitter gourd (TR) v1

Overview


Name	MS003740
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	DUF4050 family protein
Location	scaffold127: 114683 .. 115469 (-)
RNA-Seq Expression	MS003740
Synteny	MS003740

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAATCGTTAAGAAACCTAGCATATCTGACGGTTTCTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAATCTCAACGAAGCATCTCGTCTATCAGTACATCAAATCTCACACTCAATCCGAGCAATGTTGGTGGCAGTACGAGCAACCCTTCTGAATTTGTAAACCATGGCAAGTTTCGCTCTTATTTATCCGACCTTTGTTGAATAATTGATAAAAAATGAAGTTGTGCTAATATCGTTTATTGGAACTTATAGTCTGTTATTTCTTCATTGCTTTCAGGTCTCCTTCTCTGGAATCAGAATAGGCTGCAGTGGACTGGAAGTAGTAGCAAGACAACGGATCAAACTCAACAAAGACGGAAGGCAAAAATCAGGTCAGTTCACTAGGTTCATCCATTTTCAATTGCTTTCGCTTAGCGCTCATACAAAAATTGAGCATTAAAGACCTCATTGTAGATTAAGTTGATCTCTATATCATCGGTATATACGCGTTTGCAGTTGGCGTGCAACATATGATAGTTTACTGGGTACAAGACAGCCTTTTCCCCATCCAATTCCTTTATCTGTAAGTTTGCTGTTGAAGTTTTGTCATTTCTTTTTCCACTGTTCATTCCATGAATAAGAACTTAAAAAATCTTCAATTTGACAGGAAATGGTGAACTTTCTTGTGGAAGTATGGGAGCAGGAGGGCCTCTATGAT

mRNA sequence

GGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAATCGTTAAGAAACCTAGCATATCTGACGGTTTCTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAATCTCAACGAAGCATCTCGTCTATCAGTACATCAAATCTCACACTCAATCCGAGCAATGTTGGTGGCAGTACGAGCAACCCTTCTGAATTTGTAAACCATGGCAAGTTTCGCTCTTATTTATCCGACCTTTGTCTCCTTCTCTGGAATCAGAATAGGCTGCAGTGGACTGGAAGTAGTAGCAAGACAACGGATCAAACTCAACAAAGACGGAAGGCAAAAATCAGTTGGCGTGCAACATATGATAGTTTACTGGGTACAAGACAGCCTTTTCCCCATCCAATTCCTTTATCTGAAATGGTGAACTTTCTTGTGGAAGTATGGGAGCAGGAGGGCCTCTATGAT

Coding sequence (CDS)

GGTTGTTTTGGATGCTGCACTAAGCCCACACCTATTATTGCTGTGGATGAGCCATCTAAGGGATTAAGAATTCAAGGACGAATCGTTAAGAAACCTAGCATATCTGACGGTTTCTGGAGCACAAGCACGTGTGATTTGGATAATAGCACCATTCAATCTCAACGAAGCATCTCGTCTATCAGTACATCAAATCTCACACTCAATCCGAGCAATGTTGGTGGCAGTACGAGCAACCCTTCTGAATTTGTAAACCATGGCAAGTTTCGCTCTTATTTATCCGACCTTTGTCTCCTTCTCTGGAATCAGAATAGGCTGCAGTGGACTGGAAGTAGTAGCAAGACAACGGATCAAACTCAACAAAGACGGAAGGCAAAAATCAGTTGGCGTGCAACATATGATAGTTTACTGGGTACAAGACAGCCTTTTCCCCATCCAATTCCTTTATCTGAAATGGTGAACTTTCTTGTGGAAGTATGGGAGCAGGAGGGCCTCTATGAT

Protein sequence

GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSISTSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQTQQRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD

Homology

[Close]

BLAST of MS003740 vs. NCBI nr
Match: XP_022144929.1 (uncharacterized protein LOC111014486 [Momordica charantia])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 156/166 (93.98%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 98  GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 157

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQTQQ 120
           STSNLTLNPSNVGGSTSNPSEFVNHG          LLLWNQNRLQWTGSSSKTTDQTQQ
Sbjct: 158 STSNLTLNPSNVGGSTSNPSEFVNHG----------LLLWNQNRLQWTGSSSKTTDQTQQ 217

Query: 121 RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 218 RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 253

[Close]

BLAST of MS003740 vs. NCBI nr
Match: KAA0050173.1 (DUF4050 family protein [Cucumis melo var. makuwa])

HSP 1 Score: 293.9 bits (751), Expect = 8.7e-76
Identity = 146/167 (87.43%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGS-SSKTTDQTQ 120
           STSNLTL+ SNV GS S+ SEFVNHGKF   LS+ CLLLWNQ R+QW GS ++K TD+TQ
Sbjct: 81  STSNLTLSNSNVAGSVSSSSEFVNHGKF-PLLSNPCLLLWNQTRMQWIGSGTTKLTDETQ 140

Query: 121 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           QR+KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 141 QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 186

[Close]

BLAST of MS003740 vs. NCBI nr
Match: XP_038879580.1 (uncharacterized protein LOC120071390 [Benincasa hispida])

HSP 1 Score: 285.4 bits (729), Expect = 3.1e-73
Identity = 144/167 (86.23%), Postives = 150/167 (89.82%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSS-SKTTDQTQ 120
           STSNLTL+ SNVGGS S+ SEFVNHG          LLLWNQ RLQW GSS +KTTD+TQ
Sbjct: 81  STSNLTLSHSNVGGSVSSSSEFVNHG----------LLLWNQTRLQWIGSSTTKTTDETQ 140

Query: 121 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           QR+KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWE EGLYD
Sbjct: 141 QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEHEGLYD 177

[Close]

BLAST of MS003740 vs. NCBI nr
Match: KAG6589849.1 (hypothetical protein SDJN03_15272, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72
Identity = 142/167 (85.03%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 122 GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 181

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSS-SKTTDQTQ 120
           STSNLT + SNVGGS SNPSE+VNHG          LLLWNQ RLQW GSS + TTD+TQ
Sbjct: 182 STSNLTHSQSNVGGSVSNPSEYVNHG----------LLLWNQTRLQWIGSSNTNTTDETQ 241

Query: 121 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           +R+KAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVEVWEQEGLYD
Sbjct: 242 ERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 278

[Close]

BLAST of MS003740 vs. NCBI nr
Match: XP_023516635.1 (uncharacterized protein LOC111780448 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 282.3 bits (721), Expect = 2.6e-72
Identity = 142/167 (85.03%), Postives = 149/167 (89.22%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSS-SKTTDQTQ 120
           STSNLT + SNVGGS SNPSE+VNHG          LLLWNQ RLQW GSS + TTD+TQ
Sbjct: 81  STSNLTHSQSNVGGSVSNPSEYVNHG----------LLLWNQTRLQWIGSSNTNTTDETQ 140

Query: 121 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           +R+KAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVEVWEQEGLYD
Sbjct: 141 ERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of MS003740 vs. ExPASy TrEMBL
Match: A0A6J1CTQ5 (uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014486 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 6.7e-82
Identity = 156/166 (93.98%), Postives = 156/166 (93.98%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 98  GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 157

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQTQQ 120
           STSNLTLNPSNVGGSTSNPSEFVNHG          LLLWNQNRLQWTGSSSKTTDQTQQ
Sbjct: 158 STSNLTLNPSNVGGSTSNPSEFVNHG----------LLLWNQNRLQWTGSSSKTTDQTQQ 217

Query: 121 RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 218 RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 253

[Close]

BLAST of MS003740 vs. ExPASy TrEMBL
Match: A0A5A7U2N6 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold675G002060 PE=4 SV=1)

HSP 1 Score: 293.9 bits (751), Expect = 4.2e-76
Identity = 146/167 (87.43%), Postives = 155/167 (92.81%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGS-SSKTTDQTQ 120
           STSNLTL+ SNV GS S+ SEFVNHGKF   LS+ CLLLWNQ R+QW GS ++K TD+TQ
Sbjct: 81  STSNLTLSNSNVAGSVSSSSEFVNHGKF-PLLSNPCLLLWNQTRMQWIGSGTTKLTDETQ 140

Query: 121 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           QR+KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 141 QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 186

[Close]

BLAST of MS003740 vs. ExPASy TrEMBL
Match: A0A6J1H9M2 (uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC111461800 PE=4 SV=1)

HSP 1 Score: 280.0 bits (715), Expect = 6.3e-72
Identity = 141/167 (84.43%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSS-SKTTDQTQ 120
           STSNLT + SNVGGS SNPSE+VNHG          LLLWNQ RLQW GSS + TTD+T 
Sbjct: 81  STSNLTHSQSNVGGSVSNPSEYVNHG----------LLLWNQTRLQWIGSSNTNTTDETP 140

Query: 121 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           +R+KAKISWRATYDSLLGTRQPFPH IPLSEMVNFLVEVWEQEGLYD
Sbjct: 141 ERQKAKISWRATYDSLLGTRQPFPHRIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of MS003740 vs. ExPASy TrEMBL
Match: A0A6J1EZS6 (uncharacterized protein LOC111440853 OS=Cucurbita moschata OX=3662 GN=LOC111440853 PE=4 SV=1)

HSP 1 Score: 278.5 bits (711), Expect = 1.8e-71
Identity = 143/168 (85.12%), Postives = 145/168 (86.31%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKK SISDGFWSTSTCDLDNSTIQSQ SISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKRSISDGFWSTSTCDLDNSTIQSQPSISSI 80

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTG--SSSKTTDQT 120
           STSNLTL  SNVG S SNPSEFVNHG          LLLWNQNRLQW G  SSS TTDQT
Sbjct: 81  STSNLTLTHSNVGASVSNPSEFVNHG----------LLLWNQNRLQWIGGSSSSNTTDQT 140

Query: 121 QQRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           QQ+RKAKISWRATYDSLL TRQ FPHPIPLSEMV FLVEVWEQEGLYD
Sbjct: 141 QQKRKAKISWRATYDSLLSTRQSFPHPIPLSEMVKFLVEVWEQEGLYD 178

[Close]

BLAST of MS003740 vs. ExPASy TrEMBL
Match: A0A5D3C7W3 (DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold163G001290 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 2.4e-71
Identity = 139/167 (83.23%), Postives = 148/167 (88.62%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCCTKPTPIIAVDEPSKGLRIQGR+VKKPSISDGFWSTSTCDLDNSTIQSQRSISSI
Sbjct: 21  GCFGCCTKPTPIIAVDEPSKGLRIQGRVVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 80

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGS-SSKTTDQTQ 120
           ST NLTL+ SNV GS S+ SEF+NHG          LLLWNQ R+QW GS ++K TD+TQ
Sbjct: 81  STLNLTLSNSNVAGSVSSSSEFINHG----------LLLWNQTRMQWIGSGTTKLTDETQ 140

Query: 121 QRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
           QR+KAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD
Sbjct: 141 QRQKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 177

[Close]

BLAST of MS003740 vs. TAIR 10
Match: AT5G25360.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 198.7 bits (504), Expect = 3.6e-51
Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTSTC++DNST+QSQRS+SSI
Sbjct: 20  GCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQTQQ 120
           S +N T    +   STSNP+EFVNHG          L LWNQ R QW  +   T+ +  +
Sbjct: 80  SFTNNT----STSASTSNPTEFVNHG----------LNLWNQTRQQWLANG--TSQKKAK 139

Query: 121 RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
            R+  ISW ATY+SLLG  + F  PIPL EMV+FLV+VWEQEGLYD
Sbjct: 140 VREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of MS003740 vs. TAIR 10
Match: AT5G25360.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 15 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT4G32342.1). )

HSP 1 Score: 198.7 bits (504), Expect = 3.6e-51
Identity = 102/166 (61.45%), Postives = 122/166 (73.49%), Query Frame = 0


Query: 1   GCFGCCTKPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSISSI 60
           GCFGCC KP  I+AVDEPSKGLRIQGR+VKKPS+S+ FWSTSTC++DNST+QSQRS+SSI
Sbjct: 20  GCFGCCNKPPLIVAVDEPSKGLRIQGRLVKKPSVSEDFWSTSTCEMDNSTLQSQRSMSSI 79

Query: 61  STSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQTQQ 120
           S +N T    +   STSNP+EFVNHG          L LWNQ R QW  +   T+ +  +
Sbjct: 80  SFTNNT----STSASTSNPTEFVNHG----------LNLWNQTRQQWLANG--TSQKKAK 139

Query: 121 RRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
            R+  ISW ATY+SLLG  + F  PIPL EMV+FLV+VWEQEGLYD
Sbjct: 140 VREPTISWNATYESLLGMNKRFSRPIPLPEMVDFLVDVWEQEGLYD 169

[Close]

BLAST of MS003740 vs. TAIR 10
Match: AT4G32342.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G25360.2); Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). )

HSP 1 Score: 147.9 bits (372), Expect = 7.2e-36
Identity = 89/167 (53.29%), Postives = 105/167 (62.87%), Query Frame = 0


Query: 2   CFGCCTKPTP-IIAVDEPSKGLRIQGRIVKKPSI-SDGFWSTSTCDLD-NSTIQSQRSIS 61
           CFGCC +    ++ VDEPSKGL+IQG+IVKK S  SD FWSTSTCD+D N TIQSQ    
Sbjct: 17  CFGCCNRERRLVVEVDEPSKGLKIQGKIVKKDSASSDDFWSTSTCDMDHNITIQSQ---- 76

Query: 62  SISTSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQT 121
              +SN   +P     STSN +EFVNHG          L+LWN  R QW       T Q 
Sbjct: 77  ---SSNPPFDPQ---CSTSNSTEFVNHG----------LILWNHTRQQW---RECLTRQQ 136

Query: 122 QQRRKAKISWRATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLY 166
               +  ISW +TYDSLL T + FP PIPL EMV+FLV+VWE+EGLY
Sbjct: 137 CLVPEPAISWNSTYDSLLSTNKLFPQPIPLKEMVHFLVDVWEEEGLY 160

[Close]

BLAST of MS003740 vs. TAIR 10
Match: AT1G15350.2 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 78/169 (46.15%), Postives = 101/169 (59.76%), Query Frame = 0


Query: 1   GCFGCCT--KPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSIS 60
           GC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S+S
Sbjct: 3   GCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLS 62

Query: 61  SISTSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQT 120
           S   SN T +  +   +++ P E+VN G          LLLWNQ R +W G   K  +  
Sbjct: 63  S---SNQTFDSQSAARNSNAPPEYVNQG----------LLLWNQTRERWVG-KDKPNNPV 122

Query: 121 QQRRKAKISWR-ATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
              + AK++W  ATYDSLLG+ + FP PIPL+EMV+FLV++WEQEGLYD
Sbjct: 123 DHNQGAKLNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

[Close]

BLAST of MS003740 vs. TAIR 10
Match: AT1G15350.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G15770.2); Has 148 Blast hits to 148 proteins in 25 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 141; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). )

HSP 1 Score: 133.7 bits (335), Expect = 1.4e-31
Identity = 78/169 (46.15%), Postives = 101/169 (59.76%), Query Frame = 0


Query: 1   GCFGCCT--KPTPIIAVDEPSKGLRIQGRIVKKPSISDGFWSTSTCDLDNSTIQSQRSIS 60
           GC GC    + T     D PS  +    R  KKPS+S+ FWSTST D+DN T  SQ S+S
Sbjct: 3   GCVGCYREHRSTAASLKDPPSNSI---ARPCKKPSVSEDFWSTSTVDMDNITFPSQGSLS 62

Query: 61  SISTSNLTLNPSNVGGSTSNPSEFVNHGKFRSYLSDLCLLLWNQNRLQWTGSSSKTTDQT 120
           S   SN T +  +   +++ P E+VN G          LLLWNQ R +W G   K  +  
Sbjct: 63  S---SNQTFDSQSAARNSNAPPEYVNQG----------LLLWNQTRERWVG-KDKPNNPV 122

Query: 121 QQRRKAKISWR-ATYDSLLGTRQPFPHPIPLSEMVNFLVEVWEQEGLYD 167
              + AK++W  ATYDSLLG+ + FP PIPL+EMV+FLV++WEQEGLYD
Sbjct: 123 DHNQGAKLNWNTATYDSLLGSNKLFPQPIPLTEMVDFLVDIWEQEGLYD 154

The following BLAST results are available for this feature:

BLAST of MS003740 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022144929.1	1.4e-81	93.98	uncharacterized protein LOC111014486 [Momordica charantia]	[more]
KAA0050173.1	8.7e-76	87.43	DUF4050 family protein [Cucumis melo var. makuwa]	[more]
XP_038879580.1	3.1e-73	86.23	uncharacterized protein LOC120071390 [Benincasa hispida]	[more]
KAG6589849.1	2.6e-72	85.03	hypothetical protein SDJN03_15272, partial [Cucurbita argyrosperma subsp. sorori...	[more]
XP_023516635.1	2.6e-72	85.03	uncharacterized protein LOC111780448 [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS003740 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS003740 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1CTQ5	6.7e-82	93.98	uncharacterized protein LOC111014486 OS=Momordica charantia OX=3673 GN=LOC111014...	[more]
A0A5A7U2N6	4.2e-76	87.43	DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold6...	[more]
A0A6J1H9M2	6.3e-72	84.43	uncharacterized protein LOC111461800 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]
A0A6J1EZS6	1.8e-71	85.12	uncharacterized protein LOC111440853 OS=Cucurbita moschata OX=3662 GN=LOC1114408...	[more]
A0A5D3C7W3	2.4e-71	83.23	DUF4050 family protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1...	[more]

BLAST of MS003740 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G25360.1	3.6e-51	61.45	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT5G25360.2	3.6e-51	61.45	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT4G32342.1	7.2e-36	53.29	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT1G15350.2	1.4e-31	46.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT1G15350.1	1.4e-31	46.15	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR025124	Domain of unknown function DUF4050	PFAM	PF13259	DUF4050	coord: 125..166 e-value: 4.4E-13 score: 50.0 coord: 42..123 e-value: 6.2E-6 score: 26.7
None	No IPR available	PANTHER	PTHR33373	OS07G0479600 PROTEIN	coord: 1..166
None	No IPR available	PANTHER	PTHR33373:SF13	DUF4050 FAMILY PROTEIN	coord: 1..166

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003740.1	MS003740.1	mRNA