MS003633 (gene) Bitter gourd (TR) v1

Overview


Name	MS003633
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	BHLH domain-containing protein
Location	scaffold963: 314654 .. 315211 (-)
RNA-Seq Expression	MS003633
Synteny	MS003633

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CCCTCGATCTCCGCCTGGGCCCCACCCTCCGGCGCCGCCACGTTCTCCGACTTCCCCATCCCGGAGCAGCCACCCACCGCGCTGCAGCACCGCCACAAACGCTGCGGCGGCGGCGGCGGCTCGATGGGGGCAATGAGGGAAATGATATTCAGAATCGCGGCGATGCAGCCAATCCACATAGACCCAGAGGCCATAAAGGCGCCGCGGCGGCGGAACGTGCGGATCTCGAAGGACCCACAGAGCGTGGCGGCACGGCAGCGGCGGGAGAGGATCAGCCAGAAGATTCGGATCCTGCAGCGGCTGGTCCCCGGCGGCACCAAAATGGACACCGCCTCCATGCTCGACGAAGCCGTCCATTACGTCAAGTTTCTCAAGCGCCAACTTCACACCCTCCAGCAAACGGCCGCTGCGACGTCGTTTAACAACAACAACAACAATAATATTATTATGAGTAATCATAATATTAATAATTGTGCCAACAATATTAATATTAGCTATTCATCTGCGCTTTTGAAAGCTTCACACCTCCAATTCCCTCCTCCAATGGCGGCCAATTCT

mRNA sequence

CCCTCGATCTCCGCCTGGGCCCCACCCTCCGGCGCCGCCACGTTCTCCGACTTCCCCATCCCGGAGCAGCCACCCACCGCGCTGCAGCACCGCCACAAACGCTGCGGCGGCGGCGGCGGCTCGATGGGGGCAATGAGGGAAATGATATTCAGAATCGCGGCGATGCAGCCAATCCACATAGACCCAGAGGCCATAAAGGCGCCGCGGCGGCGGAACGTGCGGATCTCGAAGGACCCACAGAGCGTGGCGGCACGGCAGCGGCGGGAGAGGATCAGCCAGAAGATTCGGATCCTGCAGCGGCTGGTCCCCGGCGGCACCAAAATGGACACCGCCTCCATGCTCGACGAAGCCGTCCATTACGTCAAGTTTCTCAAGCGCCAACTTCACACCCTCCAGCAAACGGCCGCTGCGACGTCGTTTAACAACAACAACAACAATAATATTATTATGAGTAATCATAATATTAATAATTGTGCCAACAATATTAATATTAGCTATTCATCTGCGCTTTTGAAAGCTTCACACCTCCAATTCCCTCCTCCAATGGCGGCCAATTCT

Coding sequence (CDS)

CCCTCGATCTCCGCCTGGGCCCCACCCTCCGGCGCCGCCACGTTCTCCGACTTCCCCATCCCGGAGCAGCCACCCACCGCGCTGCAGCACCGCCACAAACGCTGCGGCGGCGGCGGCGGCTCGATGGGGGCAATGAGGGAAATGATATTCAGAATCGCGGCGATGCAGCCAATCCACATAGACCCAGAGGCCATAAAGGCGCCGCGGCGGCGGAACGTGCGGATCTCGAAGGACCCACAGAGCGTGGCGGCACGGCAGCGGCGGGAGAGGATCAGCCAGAAGATTCGGATCCTGCAGCGGCTGGTCCCCGGCGGCACCAAAATGGACACCGCCTCCATGCTCGACGAAGCCGTCCATTACGTCAAGTTTCTCAAGCGCCAACTTCACACCCTCCAGCAAACGGCCGCTGCGACGTCGTTTAACAACAACAACAACAATAATATTATTATGAGTAATCATAATATTAATAATTGTGCCAACAATATTAATATTAGCTATTCATCTGCGCTTTTGAAAGCTTCACACCTCCAATTCCCTCCTCCAATGGCGGCCAATTCT

Protein sequence

PSISAWAPPSGAATFSDFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPMAANS

Homology

[Close]

BLAST of MS003633 vs. NCBI nr
Match: KAA0045810.1 (transcription factor HEC2-like [Cucumis melo var. makuwa])

HSP 1 Score: 206.8 bits (525), Expect = 1.6e-49
Identity = 120/178 (67.42%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 1   PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPI 60
           P  S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+
Sbjct: 35  PYFSDYSPPPGTSLFQTTPTIIPEAPA-----RQRRSGVSGGGMAAMREMIFRIAAMQPV 94

Query: 61  HIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAV 120
            IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAV
Sbjct: 95  EIDPEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAV 154

Query: 121 HYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL 177
           HYVKFLKRQ+ TL+Q  A  ++NNNNNNN   +N+N NN  N+ N++Y+SAL KA  +
Sbjct: 155 HYVKFLKRQVQTLEQ--AGFNYNNNNNNN--NNNNNFNNFVNSANLNYASALFKACQI 203

[Close]

BLAST of MS003633 vs. NCBI nr
Match: KGN62005.1 (hypothetical protein Csa_006102 [Cucumis sativus])

HSP 1 Score: 203.4 bits (516), Expect = 1.7e-48
Identity = 118/175 (67.43%), Postives = 134/175 (76.57%), Query Frame = 0


Query: 4   SAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHID 63
           S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+ ID
Sbjct: 44  SDYSPPPGTSLFQTTPTIIPETPA-----RQRRSGVSGGGMAAMREMIFRIAAMQPVEID 103

Query: 64  PEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYV 123
           PEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYV
Sbjct: 104 PEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYV 163

Query: 124 KFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL 177
           KFLKRQ+ TL+Q  A  ++NNNNNN     N+N NN  N+ N++Y+SAL KA  +
Sbjct: 164 KFLKRQVQTLEQ--AGFNYNNNNNN-----NNNFNNFVNSANLNYASALFKACQI 206

[Close]

BLAST of MS003633 vs. NCBI nr
Match: XP_023007391.1 (transcription factor HEC2-like [Cucurbita maxima])

HSP 1 Score: 193.7 bits (491), Expect = 1.4e-45
Identity = 115/172 (66.86%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 15  FSDFPI----PEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRR 74
           FSDF       EQP     H  ++ GGGGG M AMREMIFRIAAMQPI IDPE IKAP+R
Sbjct: 38  FSDFSSLSFHTEQPALPNHHHRQKRGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKR 97

Query: 75  RNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHT 134
           RNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQ+ T
Sbjct: 98  RNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQT 157

Query: 135 LQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM 183
           L+Q      F+N  NN         NNC    N+SYSSAL KA  +   P M
Sbjct: 158 LEQ----AGFHNTTNN---------NNCP---NLSYSSALFKACQMPHAPSM 193

[Close]

BLAST of MS003633 vs. NCBI nr
Match: KAG7035229.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 191.4 bits (485), Expect = 6.8e-45
Identity = 120/175 (68.57%), Postives = 127/175 (72.57%), Query Frame = 0


Query: 15  FSDFPIPE----QPPTA-LQHRHKR--CGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKA 74
           FSDF  P     QP     Q+R KR   GGGGG M AMREMIFRIAAMQPI IDPE IKA
Sbjct: 39  FSDFSSPSFHTAQPVLPNQQNRQKRGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKA 98

Query: 75  PRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQ 134
           P+RRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQ
Sbjct: 99  PKRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQ 158

Query: 135 LHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM 183
           + TL+Q      F+N N  N      N NNC    N+SYSSAL KA  +   P M
Sbjct: 159 VQTLEQ----AGFHNANTTN------NNNNCP---NLSYSSALFKACQMPHAPSM 200

[Close]

BLAST of MS003633 vs. NCBI nr
Match: KAG6605270.1 (Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 191.0 bits (484), Expect = 8.9e-45
Identity = 118/177 (66.67%), Postives = 126/177 (71.19%), Query Frame = 0


Query: 15  FSDFPIPE----QP--PTALQHRHKRC---GGGGGSMGAMREMIFRIAAMQPIHIDPEAI 74
           FSDF  P     QP  P     + + C   GGGGG M AMREMIFRIAAMQPI IDPE I
Sbjct: 36  FSDFSSPSFHTAQPVLPNQQNRQKRGCGGGGGGGGGMAAMREMIFRIAAMQPIQIDPEEI 95

Query: 75  KAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLK 134
           KAP+RRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLK
Sbjct: 96  KAPKRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLK 155

Query: 135 RQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM 183
           RQ+ TL+Q      F+N N  N      N NNC    N+SYSSAL KA  +   P M
Sbjct: 156 RQVQTLEQ----AGFHNANTTN------NNNNCP---NLSYSSALFKACQMPHAPSM 199

[Close]

BLAST of MS003633 vs. ExPASy Swiss-Prot
Match: Q9FHA7 (Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 80/112 (71.43%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 39  GGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL 98
           G +M AMREMIFRIA MQPIHIDPEA+K P+RRNVRISKDPQSVAAR RRERIS++IRIL
Sbjct: 92  GTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRIL 151

Query: 99  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIM 151
           QRLVPGGTKMDTASMLDEA+HYVKFLK+Q+ +L++ A  T         +++
Sbjct: 152 QRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAVVTGGGGGGGGRVLI 203

[Close]

BLAST of MS003633 vs. ExPASy Swiss-Prot
Match: Q9SND4 (Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1)

HSP 1 Score: 157.5 bits (397), Expect = 1.4e-37
Identity = 80/119 (67.23%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 17  DFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRIS 76
           +F     P ++L  +   C     +M AMREMIFRIA MQPIHIDPE++K P+R+NVRIS
Sbjct: 68  NFRYAPSPSSSLPEKRGGC-SDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRIS 127

Query: 77  KDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTA 136
           KDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+HYVKFLK+Q+ +L++ A
Sbjct: 128 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHA 185

[Close]

BLAST of MS003633 vs. ExPASy Swiss-Prot
Match: Q9LXD8 (Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1)

HSP 1 Score: 138.7 bits (348), Expect = 6.9e-32
Identity = 69/97 (71.13%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 42  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL 101
           +GAM+EM+++IAAMQ + IDP  +K P+RRNVRIS DPQSVAAR RRERIS++IRILQRL
Sbjct: 92  LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151

Query: 102 VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT 139
           VPGGTKMDTASMLDEA+ YVKFLKRQ+  L      T
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYT 188

[Close]

BLAST of MS003633 vs. ExPASy Swiss-Prot
Match: O81313 (Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3)

HSP 1 Score: 125.9 bits (315), Expect = 4.6e-28
Identity = 63/91 (69.23%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 42  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL 101
           M AM+EM + IA MQP+ IDP  +  P RRNVRIS DPQ+V AR+RRERIS+KIRIL+R+
Sbjct: 85  MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRI 144

Query: 102 VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ 133
           VPGG KMDTASMLDEA+ Y KFLKRQ+  LQ
Sbjct: 145 VPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of MS003633 vs. ExPASy Swiss-Prot
Match: Q8S3D2 (Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 9.6e-26
Identity = 57/92 (61.96%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 41  SMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQR 100
           ++  M+EMI+R AA +P++   E ++ P+R+NV+IS DPQ+VAARQRRERIS+KIR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 101 LVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ 133
           LVPGGTKMDTASMLDEA +Y+KFL+ Q+  L+
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

[Close]

BLAST of MS003633 vs. ExPASy TrEMBL
Match: A0A5A7TRN4 (Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold243G003330 PE=4 SV=1)

HSP 1 Score: 206.8 bits (525), Expect = 7.6e-50
Identity = 120/178 (67.42%), Postives = 137/178 (76.97%), Query Frame = 0


Query: 1   PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPI 60
           P  S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+
Sbjct: 35  PYFSDYSPPPGTSLFQTTPTIIPEAPA-----RQRRSGVSGGGMAAMREMIFRIAAMQPV 94

Query: 61  HIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAV 120
            IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAV
Sbjct: 95  EIDPEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAV 154

Query: 121 HYVKFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL 177
           HYVKFLKRQ+ TL+Q  A  ++NNNNNNN   +N+N NN  N+ N++Y+SAL KA  +
Sbjct: 155 HYVKFLKRQVQTLEQ--AGFNYNNNNNNN--NNNNNFNNFVNSANLNYASALFKACQI 203

[Close]

BLAST of MS003633 vs. ExPASy TrEMBL
Match: A0A0A0LJI7 (BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285890 PE=4 SV=1)

HSP 1 Score: 203.4 bits (516), Expect = 8.4e-49
Identity = 118/175 (67.43%), Postives = 134/175 (76.57%), Query Frame = 0


Query: 4   SAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHID 63
           S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+ ID
Sbjct: 44  SDYSPPPGTSLFQTTPTIIPETPA-----RQRRSGVSGGGMAAMREMIFRIAAMQPVEID 103

Query: 64  PEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYV 123
           PEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYV
Sbjct: 104 PEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYV 163

Query: 124 KFLKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHL 177
           KFLKRQ+ TL+Q  A  ++NNNNNN     N+N NN  N+ N++Y+SAL KA  +
Sbjct: 164 KFLKRQVQTLEQ--AGFNYNNNNNN-----NNNFNNFVNSANLNYASALFKACQI 206

[Close]

BLAST of MS003633 vs. ExPASy TrEMBL
Match: A0A6J1L0E1 (transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111499900 PE=4 SV=1)

HSP 1 Score: 193.7 bits (491), Expect = 6.7e-46
Identity = 115/172 (66.86%), Postives = 123/172 (71.51%), Query Frame = 0


Query: 15  FSDFPI----PEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRR 74
           FSDF       EQP     H  ++ GGGGG M AMREMIFRIAAMQPI IDPE IKAP+R
Sbjct: 38  FSDFSSLSFHTEQPALPNHHHRQKRGGGGGGMAAMREMIFRIAAMQPIQIDPEEIKAPKR 97

Query: 75  RNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHT 134
           RNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQ+ T
Sbjct: 98  RNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQVQT 157

Query: 135 LQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM 183
           L+Q      F+N  NN         NNC    N+SYSSAL KA  +   P M
Sbjct: 158 LEQ----AGFHNTTNN---------NNCP---NLSYSSALFKACQMPHAPSM 193

[Close]

BLAST of MS003633 vs. ExPASy TrEMBL
Match: A0A6J1G7Q1 (transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111451594 PE=4 SV=1)

HSP 1 Score: 189.9 bits (481), Expect = 9.6e-45
Identity = 120/179 (67.04%), Postives = 127/179 (70.95%), Query Frame = 0


Query: 15  FSDFPIPE----QPPTA-LQHRHKR------CGGGGGSMGAMREMIFRIAAMQPIHIDPE 74
           FSDF  P     QP     Q+R KR       GGGGG M AMREMIFRIAAMQPI IDPE
Sbjct: 39  FSDFSSPSFHTAQPVLPNQQNRQKRGGGGGGGGGGGGGMAAMREMIFRIAAMQPIQIDPE 98

Query: 75  AIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKF 134
            IKAP+RRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKF
Sbjct: 99  EIKAPKRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKF 158

Query: 135 LKRQLHTLQQTAAATSFNNNNNNNIIMSNHNINNCANNINISYSSALLKASHLQFPPPM 183
           LKRQ+ TL+Q      F+N N  N      N NNC    N+SYSSAL KA  +   P M
Sbjct: 159 LKRQVQTLEQ----AGFHNANTTN------NNNNCP---NLSYSSALFKACQMPHAPSM 204

[Close]

BLAST of MS003633 vs. ExPASy TrEMBL
Match: A0A1S4E2F9 (transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103497414 PE=4 SV=1)

HSP 1 Score: 183.0 bits (463), Expect = 1.2e-42
Identity = 100/136 (73.53%), Postives = 109/136 (80.15%), Query Frame = 0


Query: 1   PSISAWAPPSGAATFSDFP--IPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPI 60
           P  S ++PP G + F   P  IPE P      R +R G  GG M AMREMIFRIAAMQP+
Sbjct: 35  PYFSDYSPPPGTSLFQTTPTIIPEAPA-----RQRRSGVSGGGMAAMREMIFRIAAMQPV 94

Query: 61  HIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAV 120
            IDPEAIKAP+RRNVRISKDPQSVAAR RRERISQKIRILQRLVPGGTKMDTASMLDEAV
Sbjct: 95  EIDPEAIKAPKRRNVRISKDPQSVAARHRRERISQKIRILQRLVPGGTKMDTASMLDEAV 154

Query: 121 HYVKFLKRQLHTLQQT 135
           HYVKFLKRQ+ TL+Q+
Sbjct: 155 HYVKFLKRQVQTLEQS 165

[Close]

BLAST of MS003633 vs. TAIR 10
Match: AT3G50330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 80/119 (67.23%), Postives = 97/119 (81.51%), Query Frame = 0


Query: 17  DFPIPEQPPTALQHRHKRCGGGGGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRIS 76
           +F     P ++L  +   C     +M AMREMIFRIA MQPIHIDPE++K P+R+NVRIS
Sbjct: 68  NFRYAPSPSSSLPEKRGGC-SDNANMAAMREMIFRIAVMQPIHIDPESVKPPKRKNVRIS 127

Query: 77  KDPQSVAARQRRERISQKIRILQRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTA 136
           KDPQSVAAR RRERIS++IRILQRLVPGGTKMDTASMLDEA+HYVKFLK+Q+ +L++ A
Sbjct: 128 KDPQSVAARHRRERISERIRILQRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEHA 185

[Close]

BLAST of MS003633 vs. TAIR 10
Match: AT5G67060.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 157.5 bits (397), Expect = 1.0e-38
Identity = 80/112 (71.43%), Postives = 94/112 (83.93%), Query Frame = 0


Query: 39  GGSMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRIL 98
           G +M AMREMIFRIA MQPIHIDPEA+K P+RRNVRISKDPQSVAAR RRERIS++IRIL
Sbjct: 92  GTNMAAMREMIFRIAVMQPIHIDPEAVKPPKRRNVRISKDPQSVAARHRRERISERIRIL 151

Query: 99  QRLVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAATSFNNNNNNNIIM 151
           QRLVPGGTKMDTASMLDEA+HYVKFLK+Q+ +L++ A  T         +++
Sbjct: 152 QRLVPGGTKMDTASMLDEAIHYVKFLKKQVQSLEEQAVVTGGGGGGGGRVLI 203

[Close]

BLAST of MS003633 vs. TAIR 10
Match: AT5G09750.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 138.7 bits (348), Expect = 4.9e-33
Identity = 69/97 (71.13%), Postives = 81/97 (83.51%), Query Frame = 0


Query: 42  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL 101
           +GAM+EM+++IAAMQ + IDP  +K P+RRNVRIS DPQSVAAR RRERIS++IRILQRL
Sbjct: 92  LGAMKEMMYKIAAMQSVDIDPATVKKPKRRNVRISDDPQSVAARHRRERISERIRILQRL 151

Query: 102 VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQQTAAAT 139
           VPGGTKMDTASMLDEA+ YVKFLKRQ+  L      T
Sbjct: 152 VPGGTKMDTASMLDEAIRYVKFLKRQIRLLNNNTGYT 188

[Close]

BLAST of MS003633 vs. TAIR 10
Match: AT4G00120.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 125.9 bits (315), Expect = 3.3e-29
Identity = 63/91 (69.23%), Postives = 74/91 (81.32%), Query Frame = 0


Query: 42  MGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQRL 101
           M AM+EM + IA MQP+ IDP  +  P RRNVRIS DPQ+V AR+RRERIS+KIRIL+R+
Sbjct: 85  MDAMKEMQYMIAVMQPVDIDPATVPKPNRRNVRISDDPQTVVARRRRERISEKIRILKRI 144

Query: 102 VPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ 133
           VPGG KMDTASMLDEA+ Y KFLKRQ+  LQ
Sbjct: 145 VPGGAKMDTASMLDEAIRYTKFLKRQVRILQ 175

[Close]

BLAST of MS003633 vs. TAIR 10
Match: AT3G21330.1 (basic helix-loop-helix (bHLH) DNA-binding superfamily protein )

HSP 1 Score: 118.2 bits (295), Expect = 6.9e-27
Identity = 57/92 (61.96%), Postives = 77/92 (83.70%), Query Frame = 0


Query: 41  SMGAMREMIFRIAAMQPIHIDPEAIKAPRRRNVRISKDPQSVAARQRRERISQKIRILQR 100
           ++  M+EMI+R AA +P++   E ++ P+R+NV+IS DPQ+VAARQRRERIS+KIR+LQ 
Sbjct: 241 AIAQMKEMIYRAAAFRPVNFGLEIVEKPKRKNVKISTDPQTVAARQRRERISEKIRVLQT 300

Query: 101 LVPGGTKMDTASMLDEAVHYVKFLKRQLHTLQ 133
           LVPGGTKMDTASMLDEA +Y+KFL+ Q+  L+
Sbjct: 301 LVPGGTKMDTASMLDEAANYLKFLRAQVKALE 332

The following BLAST results are available for this feature:

BLAST of MS003633 vs. NCBI nr


Match Name	E-value	Identity	Description
KAA0045810.1	1.6e-49	67.42	transcription factor HEC2-like [Cucumis melo var. makuwa]	[more]
KGN62005.1	1.7e-48	67.43	hypothetical protein Csa_006102 [Cucumis sativus]	[more]
XP_023007391.1	1.4e-45	66.86	transcription factor HEC2-like [Cucurbita maxima]	[more]
KAG7035229.1	6.8e-45	68.57	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. argyrosperma]	[more]
KAG6605270.1	8.9e-45	66.67	Transcription factor HEC2, partial [Cucurbita argyrosperma subsp. sororia]	[more]

BLAST of MS003633 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9FHA7	1.4e-37	71.43	Transcription factor HEC1 OS=Arabidopsis thaliana OX=3702 GN=HEC1 PE=1 SV=1	[more]
Q9SND4	1.4e-37	67.23	Transcription factor HEC2 OS=Arabidopsis thaliana OX=3702 GN=HEC2 PE=1 SV=1	[more]
Q9LXD8	6.9e-32	71.13	Transcription factor HEC3 OS=Arabidopsis thaliana OX=3702 GN=HEC3 PE=1 SV=1	[more]
O81313	4.6e-28	69.23	Transcription factor IND OS=Arabidopsis thaliana OX=3702 GN=IND PE=1 SV=3	[more]
Q8S3D2	9.6e-26	61.96	Transcription factor bHLH87 OS=Arabidopsis thaliana OX=3702 GN=BHLH87 PE=1 SV=1	[more]

BLAST of MS003633 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A5A7TRN4	7.6e-50	67.42	Transcription factor HEC2-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_s...	[more]
A0A0A0LJI7	8.4e-49	67.43	BHLH domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_2G285890 PE=4 S...	[more]
A0A6J1L0E1	6.7e-46	66.86	transcription factor HEC2-like OS=Cucurbita maxima OX=3661 GN=LOC111499900 PE=4 ...	[more]
A0A6J1G7Q1	9.6e-45	67.04	transcription factor HEC2-like OS=Cucurbita moschata OX=3662 GN=LOC111451594 PE=...	[more]
A0A1S4E2F9	1.2e-42	73.53	transcription factor HEC2-like OS=Cucumis melo OX=3656 GN=LOC103497414 PE=4 SV=1	[more]

BLAST of MS003633 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G50330.1	1.0e-38	67.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G67060.1	1.0e-38	71.43	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT5G09750.1	4.9e-33	71.13	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT4G00120.1	3.3e-29	69.23	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]
AT3G21330.1	6.9e-27	61.96	basic helix-loop-helix (bHLH) DNA-binding superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	SMART	SM00353	finulus	coord: 81..130 e-value: 1.9E-13 score: 60.6
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PFAM	PF00010	HLH	coord: 84..124 e-value: 2.0E-7 score: 30.9
IPR011598	Myc-type, basic helix-loop-helix (bHLH) domain	PROSITE	PS50888	BHLH	coord: 75..124 score: 15.281461
IPR036638	Helix-loop-helix DNA-binding domain superfamily	GENE3D	4.10.280.10		coord: 74..149 e-value: 2.2E-12 score: 48.9
IPR036638	Helix-loop-helix DNA-binding domain superfamily	SUPERFAMILY	47459	HLH, helix-loop-helix DNA-binding domain	coord: 79..137
None	No IPR available	PANTHER	PTHR45914	TRANSCRIPTION FACTOR HEC3-RELATED	coord: 40..153
None	No IPR available	PANTHER	PTHR45914:SF29	BASIC HELIX-LOOP-HELIX (BHLH)-LIKE PROTEIN	coord: 40..153
None	No IPR available	CDD	cd11454	bHLH_AtIND_like	coord: 76..132 e-value: 1.20294E-34 score: 114.797

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003633.1	MS003633.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0046983	protein dimerization activity