MS003632 (gene) Bitter gourd (TR) v1

Overview


Name	MS003632
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	RNA-binding protein Musashi homolog 1
Location	scaffold963: 274930 .. 287465 (-)
RNA-Seq Expression	MS003632
Synteny	MS003632

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTATTTCTTAAAATTCAGGTTCTTGGTATTCCATGGGACATCGATACAGAAGGGCTGAAGGATTACATGAGCAAATTTGGGGAATTGGAGGATTGTATTGTCATGAAGGTTTGTTTTTGTTGTTTTTTTTTCCCCATTCTTCTTATGGAAAATTCGCACTATTCACTCTTTCTTATGGTAATCTTCATGTGATTTAGTGGTGCTTTGATTTTTAGGAATGTACGAGCTGTGTCTTGTGCACAAAAATGAGCTTCGCATACTAGGAAGTGAAACATGTTTAGTTGTTGCGTGTTGGGAATGTGATTTGTAAAAGTTAATTGGAAGAATTTTTAATTAATTTTATTTATAACACAAATTTTCAATTAAATTAAATATTCTCATTTTGAAAGCTAAAGTTGACGTCCATCTCTTGTTCAGACCCAAGCCAAGACCAAATATCTATACTAAGCTTCCCCAGATACTCCTAGTAAGAAGATAACACCAAAAAATATGATCGAAACCTTTTGATGCTCGCCTATGGCCTACTTAAAATGCACCATTGGTGTCCTATAGTAGAGGATGATCTCCAGATGAAATCCAATAACTTAATCTACCTAAAGGATGCCAACAAGAGAAAAATCTTATCTTCTTGTGGATTTTAACCTTTTAGTGTTTCCCAAAGAAAGGGGAAGAGGAATTAACTAAGTAGACCTTTGGGTTTTCGTTCTTGATTGCCTTCTTCATCATGGTGTTTTGTTAATATTGAAATGGTGATGAAAGGCAACTATGGCACAACACATGCATCATTGAAGGTGTACACCATGGTTGAGGTTGAGATGTGAACCATGGCGAGTGCCTCGCAAACACTGGCTATATTCATTCTTCACTCTCCTTTTTCAAAACAAAGGGAACTTTTTTGGAAAGCAGGATTCTTGATGGTTAAATGGTTGGTTAGAAAGGAATAACAGTGTTTTTAAGGCTGTTGAGGGATCTTGGCAGGTTGTTTGGAGTATGATCTCCTTTTATGCATCCTTTTGGGCTGTTAGGTTGAATTTTGTGTTATTTGTTCTCTTATTCTAAATAGTTGTTGGATCTCTTTCTTGTAATTTTTTGGTGGCTTCTTTGTGTGTTTGGGCTTGTATGTTGTATCTTGTATGACCTTTTGTGATCTTTCATTCTTCTTGATGGGATTGGTTTATTGTTCCATAGAAAAATATACACTTTAAGTGTATTACAGAAAGTTCTAATCATGAGCGTAGAATGACTAATATCTATTTTGGAAGCATATATAATTATGAGAAAACACTAATTTGAAATAAATACTAATACTGTTTGTTGTGACTCTTATTTTTATTTATTTATTTATTGATAAAAAATCTTATTGATGAGATAGATTTACAAAGTATTTCAATGAGATATACAAACACGTTCCTTGGGAAGCCAATCATAATTTATAAACTAAATGTTGGTGAGACACTCATCTTTTCACAAGTAACCTTATCCTCATGACGACACTTGGTGCCATCGTACATGATTTCACCAAAAATAGTGAAATAAAAATGTGTCCGTTGGCATCCTGTTTTCTTGGCGTATTGTAGGGGATTTGGTTGAGAGATTGGAGAATTTTTAATGGGGTTGAGAGGTATCATGCCAGATTTAATGTATCCATTTGGGCATTGGTTTATTTATTTTTATTCTTTTTTTAATCCGTGAGTGTCTGGGCCTGTTTTGTTTGTGTTAGTAGATCCATGCCTTTTGGCTCTTTACTGTTTGCATTGGCCCTTATTGGCCACTAGACCAACCCATGGGCATTGGTTTATGGGTTTTTATTGGTTTTTATGGAAATAAATTTTGTAATTATTTGTTAGGTCTTGTTCTCTTCTCCAGATGCTCTTTTTTGTATTCTTTCATTTTACTTGATGAAAGTTGGTTTTTTATCAAAAAGTAATTGCTCTGTTTTCCTTGTGGATTGTACTGATGAAGGTAGTGAATGCTTGTCGGGACTAATTTTGTATCGTAATATCTTTTTATTTTCAAATCCATTAATTTATATAGTTATACGAATTATTTTTTCTTATATGCTAGGAGCGATCAACTGGCCGATCCCGTGGTTTTGGATATGTGACATTTGCAACAGACGAAGATGCTAAGGTAGGTGTATGTTCAACATTTTCTTTTGGTTGACTTGATATTTTCTGATGTCTAATATCTGTTTGTTACAGAATGCACTATCTAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTAAAAGTTGCCACACCAAAGGTTAGTATTTTTTTCCTGCTCTCTCTCTTTCCTTTTCTTATTTGCACTCTCACACATTTTTATTCTCCAGAATGTTTTTTGTTTTATCCTCTTTTTGAATCAAGAAACTGTAAAAAGTGTGAGTACTGTATTTTCATGTGTATGCATGCAACTGGATTGGACATGGACTTCATATTTTCTGTGGACAGGAGGAGATGAGAGCACCTCCAAAGAGAGTTACCAGGATCTTTGTAGCAAGGATCTCACAATCCGTAACTGAGGCTGCCTTCCGCAGGTAGTTTAGTGTGATTCTGTGCTCTTTTTCCTTCTTTTTCTTGTTACATTTCATAGTGTTCTTTTATTTTTAACCTTTTGAGTGAAGGTTGTGAGTGACTTCAGGCAAACGAAAGTTTTCATTTACTTCTATAAAAATGAAGGTTGACAGTGGCTATGTACATATTTCTAACATATTTTTTGAACTATAGGCATGCCTTTGAAATTCTCGTGAGTTGTAAATGGTAAATCAACTTTCATTTTTGAAACTGAGTGGAAGACTCACATATATCAGGGTTGATGGTTAATTTTAAGGGAATAAGCCATAAAAGGTCTGGCCCTTTCTTACATGATGATGATTAATTCACAACTATCTCTCCCTGAAGCATCTTTCCTTCATTTTCTGTCATTCAATACTTGAAGTCTATGAAACACGAACGCTGTAGGTTGGATAACATGTTCATGTTTGTGTGTGCCATGTGTTGCTCCAAGGCTCTGACATTATTGGGCACGTGTAAGATATATGTTGGAGTTAGACACGAGTTGAACAAATTGAACATGAGTCCTATAGATGTTAAGGCATCTATCGAATACTTATTGCACATAATATATAGATTTAAATAGTAATAGGAGTATAATCGCTTCAGTTTAGCAAAACCGAGTTAAACTAATAACAAAAGAAGATTTTATACAAAATCGAACTGAACCCCGCTAGGAAACCTAAAATCGAACCAAACTGATAAACCGATGGTTTGTCGGTTGGATCTGGCAGTTTATTCGATTGGGTTTTTGAATTATAAAAAAGGTGAAAAAAAGAGAAAACCCTAGCCTTATTCCTTCCCTTTTTCTCCCTCTCGTTCAGTCACCTCAGCCTATTCACTCCCTTTTCGGAGACCCCCCTTCTCGACAGCACAAATTTGGAAAAGGTACGTGGTAGCATCACATTCTTGCTGGAGACAAACATGGTGATTGAACTCTTGATGGCAGTGCGACAGATAGCAGGTTGGCGGCATCACCTAGTGATGGTGCAAGACCCTCCTCTAGGCCAGCGAACCCATGTGAAGCTGGACCCAAGCGTCAGTGATTCCTCATGACGATTATAATGAGCGGCAGTATCTCCTCCAAGCGGCCATTTGACGAGCCTGTGATGTCCTCACACCAGATCAGAGAGCGGTAGAGAAGTGGGGAGAGGTAGAGAGAGTTTGGAGAGACGTAGAGACAGCCTGGGAGAGATGAAAGAGTTGAAACTTTATTTTTATTTTTAAAGCTAGGTAGGGGGAGGGGAAACAAATAGGCTATCAAATGGGCTGTGGGCTTGGATTTAATTTTAAATGAAAGGAAAATTGTGATGGGCTTTGGGCTGGGTTGCCTTACTGAGTGCTGGGTGGTTAATTAGTAAAGTAGTCTTCTTAAACGGTTCGGGTCGTTTTTTTATTCAATTTGAGTAAGTCGAACTGATGCCAACTGATTAATTTGGTTTACATGATCACCTGAACCAAAGCCGAAAATCGTACCTCAGTCGGTTTAATTGGCTTCATCAGTTTTTACTTGCACTCCTTTCTAGTAATATAGGATAAAATATTAAATTTTGAGAGTAAGATATACCAAAACCTTTTTTTTTTAAATGTATTGAAATTCTTTAAGGTAAAAAAATGATATATATTTTAACTAACATGTCCTTGCTAGGTTCCTGTCTAGATTTTTAGAAAATAATGTTCATTGTGTCTGTTTTGTGTTGTGTGTGTCTCATGTCCCTGCCTCTTTACTTGAAATGATCTCAAGAGGAATATATCTACTATCTTGGAGTTATAAATTTGACAGGGAAGTATCAAGAGGAGGAAGTAGGGCCTGATTGAGAGGAGAACAAGGAGGAAATCTGGAAGAAGAAAAAGATTGAATCAAGACAAAAGAATGTTGGCAATAGATCATTTAAGGAAGTTTCTGGAGATCTGAGAAAGTTGAGAATCTCTAAATGAATCTTTGTAGCTCGAAATTATTAGAGCTAGAAAGCTAACGTGTAATTATTAGTGAATAGGAACTAGGAATAGAGATTGATTTAGAAGAGAACAGGGGAAAAAGTTGGAAGCAGAAAAATGTAATTATTAGTGAATAGGAACTAGGAAGTAGAGACTGTTTTAGAAGAGAACAGGGGAAAAAGCTGGAAGCAGAAAAATATTGAATTAGACCATAAGCATGTATAGAACATTGAAGAAAGTTTATGGAGGTCTGAGTAAAGTGGAGAACCTCTTCATGAAACTTCATAGCAACTTGGTAAAATATAGAACTTTTGGGGTGGCAGTTGAAAGACTCATTTGTTATTTTTCCATTCACATCATTACATGTGGAGATGACAAAATTCTCACTCGGATCCTTTTGTTTCAGATGGGGATGGTGGCTGGCACAAGTTTTTTTAAAATTGAATTTGGAGATGGACTGGGTGCATTTCCCACTCAAATGTGTATCCAAGTTATTATAATTATACTGTTAACCTTTTATTCTAATCCGAAAAGTACTTATGCTATTAACCTTTTAGTCTAGTGATGAGTCTTTATAATATCATTGCTACAATGTTGGTGAACAGATTGAGGAAAGTTCTACCTTGCATGATCCCTCATTCACAAGGAGCATTGATTGAGGGAAGGAAAAGTTTAGACCAGCGAGTGGCCGATAAGGTGATCGAGGTTATTTAGAGAGGAATCAGGAATGAGTGATCTTAAAGATAGATTTTGAAAAAGCTTATGATTGTGTTGACTAAGACTTTTGGATAAGGTGTTTTGGAAGAGAAGGTTTGGGTTCAAACGGAGGGCTTGGATGTTGACTTGTATGGTAACAGTCAATTATTCTATCCTAGTTAATGGTAGATCTAGAGGTAAGATTTTTGTTTTAGATGTCTTAGGTAAGGTGATCCCCTATTCCCTTTCCTCTTTAATTTAGCGATTGACATCCTCAGCGAACTAGTCTCACCTGGAGTGGAGAAGGGCGCTATTGCGGGAGTTGAGATGGAAAGGGATAGTACACATCTTTATCATCTCTAGCTTGCGGATTATATTCTTCTTCTGCTCCAAACAGGAAAGGTACTTCGTTAATATTAATGGTCTTTTGTCCTTCTTTGAGTATATTTCAAGCCTCAAAATTAATAGAGGAAAAAGTTCGACCTTGGGGATTAATTGTGACTCATTGAAATTGGATGCTTGGGCTTCGTTGGTGAGTTGTGAATTGAGTAGCCTTCCTCCCTCTCACCTTGCGCGGAAGCAATTTGCAGAGTTGTCATTTTGAAACCTTGTCTAAATGGTTCAAAAGTGTTTGTCTTCCTAGAAAAAGGCCTTATTTTCTTAAAGGGGGAAGATTAACTCTCATCTAGTTCGTCCTAAGTGGGATCTTGACATACTCCCTATCCCAGTTTTTAGTCCCTTTTTCAATGAGTGAAAAGCTTGAGAAAATCATGAGGGACTTTTTATGCGAACGAGTTGATGAAGGGGGTGGCACCCATTTGATTAGGTGGGAGATCGTTTTGCGTCCTCGAATTCCTGAGAAGTCTAGGCATTGGTAACCTACGACTACGTAATAAGGCCTTGTTGGCCAAATGACTGTGGCATTTCTTTAAGAACAAGGCATTTTATGGCATAAGATTATTGTGAGTAGATACGGTATGCACCCTTTTTAGTGGGTCTCAACTTATGGGTCTAAAGGGATTTTTAAGAAACCCTGGAATTTTATTTCTTTAGGTTTCCCTGATGTTGTCACAATTTGTAAAATGCTCTCTTGGGGAAGGCACAAGGATTTATTTTCAGGAGGATTTTTGGGTGGGAGACAAACCTCTTTGTGCTTTGTTCCTTTGTTTATATCTTTCTGATAAGAGGTTGCATTTGGTGGCCTTTATTTTGTCTTCCTTGGGATCTAATTTACAATTGGTGGCCTTTATTATGTCTTCCTTGGGATCTAATTTTCTCTTTTGTTAGGCTTATGTAGTCTCTTATTAGACAGGGAGACGGTGTAAGTGTCTACCCTTCTTCCTCTTTTGGGTAATGTTTGGATGGGTTCGAGGAGTGATGTTTGTCTCTGGGGCCCAACCCTTCCCAGAGGGGTCTTTCAGATTTTACGTGCCCCTTCGTCCCCTAGTGCCCTTGACCCTTCTCTCTTCTCCCTTTGGAAGGTTAAGATCTCAGGGAAGGTAAAATCCTTGTATGGCAGGTATTTTATGGGAGAGTTAATACCTTGGACCGTAATTAGAGGCAGACTTGCAGTGGTGCAGTCTGTGTAAGCTTGTGTCGAAGGATCTCAATCATATCCCTTGGAGTGTTGATTTGCTTAGGCTTTATGGAGTTGTTATGCTTCGACTTTTGAGATCTTGTGGGCTTGTAATAGGGATTGTTGTTTTATGTTAGAGGAGATTCATCATTTTCCCCCCTCTTGTGATAAGGGCAGAGTTCTTTGGTAGGCTTGTTTTTCACTCTTTTGTGGGGTTTACGGGTTGAGAGTAATGTCATAATTTTTGGACGGGTAAAGAGGTCCTAGGAAGAGGTGTGAGAGGTTGTTAGATTTAATACCTCTTTATGGGTCTCGGTTACTAAACCGTTTTGTAATTATTAGTTAGGTTTTATTCTTTTCGATTGGAGTTTGATGGTTAGTTTGAACTTTTTTAGAGGAGCTGTTTTTTTTGCCCTTGTATTTTCTTTCATGTTTCTTAATGAAAGTTTGGTTAAAAAAAAAACTAAGACACTATTCAAGCATCTTGTAGCAGAGTTGCAATGTTTGTTTTAAGAAATTGATACACGTTTTTCATTCATGATGTGATGGCCATTTTTTTGTGGTTTACGATTCAGGATGAAAATGAATTTTGTGTTTTTTTTTTAATGTTTTTTGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCTAAGGTACGCTTTCCTTTTTGCTGAACTGGGAAAATTTGTTATGTGGTTATACTTTTCAAGTGTCTTGTGTAAAAGTAAAACAGGAAGGAGATTTTTTATTCTTACTTCGCTTCCACAAGTTCATGTACTATGTAAAATTGGAAAACTATTGATTTGACCACATATGTGCACCGATTTTTAAGTACGAGGTACCATGTGTTTGACCTCTTTTAATGCTTCCTTGATTAATTATTCAGGATCAGGGCTCAAAAATGCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGGTTCGATTATCTTTTTATGTTGATGTAACATATGATTGCTGAGTTCTCTGTCTTCTGCTTTAACATATGATTGCTGAGTTCAAGTTGACAATTTTTTATTTGTTTCTTAAATTTCTAAAAAATGTATTTGTCTGTTTTTCGATAAGAAACAGAGAAGATGCATAATAATCACAAAAAAAACAGCCTAAGGGCAGGGGTAGAGGAAACTCCTTCCCAGAAGAAGCTAAAACATGGAGGCCGTCCTATTTTGAAGGATATTTGGGTATTTGTGTTGTAGTTGAGGTTTTTTTTTTTTTTTTTTTTTTTTTAAGATACTGTTCAAATGGATGATATATATTATTATTGAATTAGTCCCAAAGTTGTAGATGTCGATGGACATGTCGAGGTATCAATTTTATTGAAATGTTGACGTCAATGGATAATTCCGGAAAAATTATATAAAAAAATTCATAACAAATATTTAAATTAACAAATAAACAATTCATCATTTTTAAATAAGTTAAAAATTATTAATATTAATATTATGTTTAGACTAGTGGTATTTTGTTGATATTTTTTTTAGATTTTGTCAAAGTGTTTTTCTGATGCTATAGAAATATCAATTTGCTCCTCGTGTCTATGTCGAACTCATGGACGTATGGAAGTATTGATGAAAATGTTGACATATTGATGGAAATTTAATGCCCTGATTTGTCCATAATATACCAGATCAATCACTGTTTTGAGAGGTGCATTTAGATGTGCTCCTTGGAGGTCCAAGCAGTAAGCACCTTTAGTGTCTCGCTTGGTGAGGCTAGACAACTCCCTCAAGTGTATGTCTTGCCTAGTTTATTGAATTTTCTGTTTGGGGGACAGTAACTTTTTTTGGGAAGGATCCTTGGATCAGTTACAAGTTGCTCCAATCACTTTATCCATCAATTAGATGACAATGATATTACAAAGAAAGGGGAGGGAGAGAATCTAGCACAAAAGAAGATACAGTGAAAGTTGCCAACATATACAAACAAGGTTAAACTATAATTAAAAAAGTACTAAATTAGTAGTACTGGTGTTTTGAAAAGTGTGAGGTGCAGTAAAGCACAATAGTCTTTGGGGCTTAACCGCAAGGTGAAAAAAAGGCAAGAGGTTTTCTTTGCTGGGCACACAATAGTAGAATTTAAATAATGTTTTTGTATATGAAAAAAAAAATAGTACTATGAAAAATTAGATAATGAAAAGTTTAAGCGATTAGGGGTTTTATTAGAGATTGTGGAGAAAAAAGAACATCTTGTAAGAATAAAGCCTCTAATCTCTTAGAAGGTGCACTTTTTCAACTAGTTTGTTGGAGAAATTCTTCCGATCTGTTTGAGTGGTTTTTATTGGAGGAAGTTTATTTTACCTTAAATTATTTCAAGCTATAAAGCACAAACACTTTAGTTTGAATAACGTGTCATGGTCTATCGTCCAAGACTCGAACAAGTGTTTGGACACACTTTGATTATAATTAGACACATGTTAACACTCTACTACAAGCAACCTTGGGGGGTCACCCATTCAGAAAGAACAGGAAGATTACATGGTCCCTCTTCATCAGAGCCTTCTTATGGAGTTTATGGAGAAAAAGGAATAACAGAATCTTTAACAACAAGTCCCAGACTATCAACAATTTTTGTAATGGGATTTTTCTTTTAGCTCTTAGCTGGTGTAAAAGTTACTTTCTTCTTTCTCTAGCTACAACTTAAATAACCTTATAAGGAATTGGAGGGCTCTTTTGTAGCTCTTCGCTCCTCCATTTTTATATTTCATATTATCAATGAATATGTGTTTCTCATTAAAAAAAAAAAAAGATAATAATAATAAAATAAAATAATTAGACACATGTTGGACACTTCGCTAGCACTTACACTAGTTGTACGAATTGATTATCAGTCACTAAACTCGCCAGGCAAGTGTTGAACATTTGTTAAACATAATAAATAGACAAATAGTAATATATTTTAAAATTAATAAATTTTCTCTTGTATAAACATGATATATATTTTAAAAAAATTTATATTCTATTTCTAATAAACATATTCTTGCTGTATCCCTGTCATCCTAGGTTTTTAGAAGATAAAGTGTCACCATGTCTGAGCTTCTTTGATTTTTCTTCTTGTAGGCAGGTTTGTTTTGGAATTTCTTTGGAACATTTGGTTACAGAGAAATTTTAGTGTATTGAGAGTTCTTGGGATAAAGTTAGGGATGTACCACTTTAATAGTTCGTTTGTTTCTGTTTTTTATATGGTCTCCTTTTGGTTGTACTTTCGTCATGTTTCATTTAAAAAGTTCCAGAGGGTTTTTCTTTTCCTTAGCGTACCTTGTGCTTGATATTGCCTGTCTTTCGTTTTAATTTTGTTTTCAATCCTCGTCATACTGTTTTCACATTAATATTAAACTTTCAACTATTCTATTTCATTGTTTATAATGAAAAACTCCGGCGACTATTTCATAGTTGCCTATGATTCAAGGCACTGAATGTGACAAATTTGTTTTGCAGATTCTGTGGAAAATTTGATGGCTGAAACTCATGAATTAGGAGGTTCTACTGTGGTTGTCGATAGAGCAACCCCCAAGGCAGGTTTTTGGAATTGACTGTTTAACACCATATTTATCTTCCAAAGGATATCTTTTTTTTTTATTTATTTTAATTAAATGTGTACGTCTAATTAAAGGTAAATATACTATATTGCCAGGATGATGATTTCAGGCCCATAGGGAAAATGGCGCAAGGGAGTAGTGGTGGTGGATATGGTGCATATAATGCTTATATTTCTGCAGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCGGGCTCAGTTTATGGGAGTATGTTTCTCTGATAGTATCCTTCATGTGATGCTTAGCCTTCATAATATTGTTGTGATGATTTACTTTGTCATTGAAGTAGGAAGGGAATTACGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTTCTGATGATCTCCGCCAATATTTTGGTAGATTTGGCCGTATTTTGGATGTCTATGTTCCCAAGGTAAGATTAGATTTAGTTATTGCTACTTTTATAAGAGTGACTAATTTAGATAGCCTAAAGATCCAGTTGTTGCTGATTAATGTAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTGGCAGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTATGCATCTACATGTCACTTTGCTTGCTAGAAGGGCATAATTGTCTGTTTGAAGTTTTGAACATGTGCTGGGACGGTAAAGATTGGAGCTGTTTTTTGTAATTTAATTGATAAATACATGTTTTGATAAAAATGGATATGAAACACTAGAATTGTATGTTCTTTTTTCTAAAGCGTTCAATTATATGGTTATTTGAATTTTGAATTTTTTGGGTTCAGAGCTCTTTCTGTAATTTTTCTTTTGGTTCCTTTGTTTAGGCTCCGTTCGTGTGGGTTGATTCTTTCTTTCTTTCTTTTTCTTTTCTTTTTCTTTTTATTAAATATATTATACATTTGTTTTCAGTGTTGGAAGTTTTTACTGTTTCTACAGATTTCAAACTTGTCGATGATTTCACTTTTTGCTTACAGTAGTTGTCTATTGTCCAATTCTATTCTGTAAGAGAGCAACTATTGAGAGAGTTTGAGGCTCTTTCTGCTATTTGTTTGGCAAGATTTTAACAAACAAAGATCCTTTAAAGTTATGGGAGCTCTGAAACTTTTGGGGATCTTTCCAATTAAAATGGCTTGCTTATCTTCAAAACCAAACAACTAATACAGATGAACAAAAGAGCCAGCAAAGACTTTTTACTACCTTGTGGAGGAGGAAATTCTATAAGAGAACCAAAACTTCTGCATTTCTCAAATTTTACGAGGAAAAGTGATGGTTTTGGACCTTTTCATCACGGTGACGGGTGAATTTGGATACTGGACTTTTCTGGAAAGTCTTTTCCACGTCCCATCATATTAGAGCTACCAGCTATGCCCTAGGGAACTGAATTTGGAACATAAAAATTCTGAAAAGGTTAAAAGGTCTTCCTTTTGGCTTTGAAAGGTTGGTGCATGATGTGCAAAATCAAGAAGAAAATCGGAACCACCTTTTTCTCTATTGTGTGTTTGCTGCTAATGTTGGAGCGTTACCTTCAGTGAATTCAATTTGATTGGAGCAATCTTTCTTTTGCTACACAATTTCACGAACAAGCTTCTCCGGGTAACCATGAAAAAGTGCTTTAGGAAAATGCTTTAGCGTGCTGGTCTTTGACTCTTCAGGAGCTTTTCAGAAACGATCTGACAGTTTTTTAGCTTCCGATTGTAGCACCCTTCTAAACTTTTCTACAACTAATTCCTCCTCTCATATACACTGATTGGAGCCATTTTCAGTAATCTCCACTGGTTTTGTGACACATATGTCTGTTCGTCACGATTTTTCAACAACAATTTTTGCGGGAAAGATTGCCAAGAATTGTTCTTTCTCTTGTGAATAGTGGTTATAAGTTATATGATCATTACCAAAGCTTTACTCTTGAGTTATGAAATCTTCTTCAGTCCAGAATGATAATTTCACTTTCGGAGTCTGCAGGTTGCTATAGATTCAGCCACGCCTCTTGATGATGCTGGAGCTCCGACTGGAGCTGGAGCAAGTGGAAGTTTTATGATGAACAGTGCAGCAGAATCGTTTGGTGGCTATGGTGGTGGACCTATGAGGACTTATGGAAGGATGTATGGGAGCCTGGATTTTGATGAT

mRNA sequence

TTATTTCTTAAAATTCAGGTTCTTGGTATTCCATGGGACATCGATACAGAAGGGCTGAAGGATTACATGAGCAAATTTGGGGAATTGGAGGATTGTATTGTCATGAAGGAGCGATCAACTGGCCGATCCCGTGGTTTTGGATATGTGACATTTGCAACAGACGAAGATGCTAAGAATGCACTATCTAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTAAAAGTTGCCACACCAAAGGAGGAGATGAGAGCACCTCCAAAGAGAGTTACCAGGATCTTTGTAGCAAGGATCTCACAATCCGTAACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCTAAGGATCAGGGCTCAAAAATGCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGAAACTCATGAATTAGGAGGTTCTACTGTGGTTGTAAATATACTATATTGCCAGGATGATGATTTCAGGCCCATAGGGAAAATGGCGCAAGGGAGTAGTGGTGGTGGATATGGTGCATATAATGCTTATATTTCTGCAGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCGGGCTCAGTTTATGGGAGAAGGGAATTACGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTTCTGATGATCTCCGCCAATATTTTGGTAGATTTGGCCGTATTTTGGATGTCTATGTTCCCAAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTGGCAGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTTGCTATAGATTCAGCCACGCCTCTTGATGATGCTGGAGCTCCGACTGGAGCTGGAGCAAGTGGAAGTTTTATGATGAACAGTGCAGCAGAATCGTTTGGTGGCTATGGTGGTGGACCTATGAGGACTTATGGAAGGATGTATGGGAGCCTGGATTTTGATGAT

Coding sequence (CDS)

TTATTTCTTAAAATTCAGGTTCTTGGTATTCCATGGGACATCGATACAGAAGGGCTGAAGGATTACATGAGCAAATTTGGGGAATTGGAGGATTGTATTGTCATGAAGGAGCGATCAACTGGCCGATCCCGTGGTTTTGGATATGTGACATTTGCAACAGACGAAGATGCTAAGAATGCACTATCTAGTGAGCACTTTCTTGGCAACAGAATGATGGAAGTAAAAGTTGCCACACCAAAGGAGGAGATGAGAGCACCTCCAAAGAGAGTTACCAGGATCTTTGTAGCAAGGATCTCACAATCCGTAACTGAGGCTGCCTTCCGCAGTCATTTTGAGAAATATGGAGAGATAACAGATCTTTACATGCCTAAGGATCAGGGCTCAAAAATGCATCGTGGAATAGGTTTCATCACTTTTGCAAGTTCAGATTCTGTGGAAAATTTGATGGCTGAAACTCATGAATTAGGAGGTTCTACTGTGGTTGTAAATATACTATATTGCCAGGATGATGATTTCAGGCCCATAGGGAAAATGGCGCAAGGGAGTAGTGGTGGTGGATATGGTGCATATAATGCTTATATTTCTGCAGCAACAAGATATGCAGCACTTGGTGCTCCTACCTTATACGACCATCCGGGCTCAGTTTATGGGAGAAGGGAATTACGAGGGATGGGAAAAAAGATTTTTGTTGGTAGGCTCCCACAAGAAGCATCTTCTGATGATCTCCGCCAATATTTTGGTAGATTTGGCCGTATTTTGGATGTCTATGTTCCCAAGGATCCTAAAAGATCTGGTCATCGAGGTTTTGGTTTTGTAACTTTTGCTGAAGATGGTGTGGCAGATCGTGTATCTCGAAGATCTCATGAGATTTGTGGACAACAGGTTGCTATAGATTCAGCCACGCCTCTTGATGATGCTGGAGCTCCGACTGGAGCTGGAGCAAGTGGAAGTTTTATGATGAACAGTGCAGCAGAATCGTTTGGTGGCTATGGTGGTGGACCTATGAGGACTTATGGAAGGATGTATGGGAGCCTGGATTTTGATGAT

Protein sequence

LFLKIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSSEHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMPKDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSSGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPLDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD

Homology

[Close]

BLAST of MS003632 vs. NCBI nr
Match: XP_022149462.1 (RNA-binding protein Musashi homolog 1 isoform X2 [Momordica charantia])

HSP 1 Score: 681.8 bits (1758), Expect = 3.1e-192
Identity = 338/346 (97.69%), Postives = 341/346 (98.55%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSS 183
           KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVV+    +DDDFRPIGKMAQGSS
Sbjct: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVDRATPKDDDFRPIGKMAQGSS 183

Query: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR 243
           GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR
Sbjct: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR 243

Query: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303
           QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL
Sbjct: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303

Query: 304 DDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           DDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD
Sbjct: 304 DDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 349

[Close]

BLAST of MS003632 vs. NCBI nr
Match: XP_022149461.1 (RNA-binding protein Musashi homolog 1 isoform X1 [Momordica charantia])

HSP 1 Score: 674.5 bits (1739), Expect = 5.0e-190
Identity = 337/347 (97.12%), Postives = 340/347 (97.98%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSS 183
           KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVV+    +DDDFRPIGKMAQGSS
Sbjct: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVDRATPKDDDFRPIGKMAQGSS 183

Query: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYG-RRELRGMGKKIFVGRLPQEASSDDL 243
           GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYG  RELRGMGKKIFVGRLPQEASSDDL
Sbjct: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGIGRELRGMGKKIFVGRLPQEASSDDL 243

Query: 244 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 303
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 244 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 303

Query: 304 LDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           LDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD
Sbjct: 304 LDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350

[Close]

BLAST of MS003632 vs. NCBI nr
Match: XP_038877270.1 (RNA-binding protein Musashi homolog 1 [Benincasa hispida] >XP_038877271.1 RNA-binding protein Musashi homolog 1 [Benincasa hispida])

HSP 1 Score: 649.0 bits (1673), Expect = 2.2e-182
Identity = 324/347 (93.37%), Postives = 333/347 (95.97%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWD+DTEGL+DYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDVDTEGLRDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSS 183
           KDQGSK HRGIGFITFASSDSVENLMA+THELGGSTVVV+    +DDDFRPIGKM QG  
Sbjct: 124 KDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQGGG 183

Query: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR 243
           GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE+RGMGKKIFVGRLPQEAS+DDLR
Sbjct: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREIRGMGKKIFVGRLPQEASADDLR 243

Query: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303
           QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL
Sbjct: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303

Query: 304 DDAGAPTG-AGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           DDAGA  G AGASG+FMMNSAAESFGGY  GPMRTYGRMYGSLDFDD
Sbjct: 304 DDAGAGAGAAGASGTFMMNSAAESFGGY-VGPMRTYGRMYGSLDFDD 349

[Close]

BLAST of MS003632 vs. NCBI nr
Match: XP_008457826.1 (PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo] >XP_008457827.1 PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo])

HSP 1 Score: 644.4 bits (1661), Expect = 5.5e-181
Identity = 321/347 (92.51%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWD+DTEGL++YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSS 183
           KDQGSK HRGIGFITFASSDSVENLMA+THELGGSTVVV+    +DDDFRPIGKM QG  
Sbjct: 124 KDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQGGG 183

Query: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR 243
           GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS+DDLR
Sbjct: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDLR 243

Query: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303
           QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL
Sbjct: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303

Query: 304 DDAGAPTGA-GASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           DDAGA  GA GASG+FMMNSAA+SFGGY  GPMRTYGRMYGSLDFDD
Sbjct: 304 DDAGAGAGASGASGTFMMNSAADSFGGY-VGPMRTYGRMYGSLDFDD 349

[Close]

BLAST of MS003632 vs. NCBI nr
Match: XP_011649346.1 (RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >XP_031737421.1 RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >KGN62007.1 hypothetical protein Csa_006754 [Cucumis sativus])

HSP 1 Score: 637.5 bits (1643), Expect = 6.8e-179
Identity = 320/349 (91.69%), Postives = 331/349 (94.84%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWD+DTEGL++YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQ--G 183
           KDQGSK HRGIGFITFASSDSVENLMA+THELGGS VVV+    +DDDFRPIGKM Q  G
Sbjct: 124 KDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQGGG 183

Query: 184 SSGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDD 243
             GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS+DD
Sbjct: 184 GGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADD 243

Query: 244 LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT 303
           LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT
Sbjct: 244 LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT 303

Query: 304 PLDDAGAPTGA-GASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           PLDDAGA  GA GASG+FMMNSAA+SFGGY  GPMRTYGRMYGSLDFDD
Sbjct: 304 PLDDAGAGAGASGASGTFMMNSAADSFGGY-VGPMRTYGRMYGSLDFDD 351

[Close]

BLAST of MS003632 vs. ExPASy Swiss-Prot
Match: Q8W034 (Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP1 PE=1 SV=1)

HSP 1 Score: 118.2 bits (295), Expect = 1.8e-25
Identity = 64/204 (31.37%), Postives = 108/204 (52.94%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ V GI W+ D + L+++ + +GE+   IVM+++ TGR RGFG+V F+        L  
Sbjct: 7   KLFVGGISWETDEDKLREHFTNYGEVSQAIVMRDKLTGRPRGFGFVIFSDPSVLDRVLQE 66

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPK----------------RVTRIFVARISQSVTEAAF 123
           +H +  R ++VK A  +EE +   +                +  +IFV  +  ++T+  F
Sbjct: 67  KHSIDTREVDVKRAMSREEQQVSGRTGNLNTSRSSGGDAYNKTKKIFVGGLPPTLTDEEF 126

Query: 124 RSHFEKYGEITDLYMPKDQGSKMHRGIGFITFASSDSVENLMAET-HELGGSTVVVNILY 183
           R +FE YG +TD+ +  DQ +   RG GF++F S D+V++++ +T H+L G  V V    
Sbjct: 127 RQYFEVYGPVTDVAIMYDQATNRPRGFGFVSFDSEDAVDSVLHKTFHDLSGKQVEVKRAL 186

Query: 184 CQDDDFRPIGKMAQGSSGGGYGAY 191
            +D +    G+   G   GGY  Y
Sbjct: 187 PKDANPGGGGRSMGGGGSGGYQGY 210

[Close]

BLAST of MS003632 vs. ExPASy Swiss-Prot
Match: O43347 (RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1)

HSP 1 Score: 114.4 bits (285), Expect = 2.6e-24
Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS- 63
           K+ + G+ W    EGL++Y  +FGE+++C+VM++  T RSRGFG+VTF         L+ 
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 64  SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQSVTEAAFRSHFEKYGEITD 123
           S H L ++ ++ KVA P+   RA PK VTR   IFV  +S + T    + +FE++G++ D
Sbjct: 81  SRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKQYFEQFGKVDD 140

Query: 124 LYMPKDQGSKMHRGIGFITFASSDSVENLM-AETHELGGSTV 161
             +  D+ +  HRG GF+TF S D VE +     HE+    V
Sbjct: 141 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179

[Close]

BLAST of MS003632 vs. ExPASy Swiss-Prot
Match: Q61474 (RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.4e-24
Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS- 63
           K+ + G+ W    EGL++Y  +FGE+++C+VM++  T RSRGFG+VTF         L+ 
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 64  SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQSVTEAAFRSHFEKYGEITD 123
           S H L ++ ++ KVA P+   RA PK VTR   IFV  +S + T    + +FE++G++ D
Sbjct: 81  SRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 140

Query: 124 LYMPKDQGSKMHRGIGFITFASSDSVENLM-AETHELGGSTV 161
             +  D+ +  HRG GF+TF S D VE +     HE+    V
Sbjct: 141 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179

[Close]

BLAST of MS003632 vs. ExPASy Swiss-Prot
Match: Q8K3P4 (RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus OX=10116 GN=Msi1 PE=1 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 3.4e-24
Identity = 62/162 (38.27%), Postives = 95/162 (58.64%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALS- 63
           K+ + G+ W    EGL++Y  +FGE+++C+VM++  T RSRGFG+VTF         L+ 
Sbjct: 21  KMFIGGLSWQTTQEGLREYFGQFGEVKECLVMRDPLTKRSRGFGFVTFMDQAGVDKVLAQ 80

Query: 64  SEHFLGNRMMEVKVATPKEEMRAPPKRVTR---IFVARISQSVTEAAFRSHFEKYGEITD 123
           S H L ++ ++ KVA P+   RA PK VTR   IFV  +S + T    + +FE++G++ D
Sbjct: 81  SRHELDSKTIDPKVAFPR---RAQPKMVTRTKKIFVGGLSVNTTVEDVKHYFEQFGKVDD 140

Query: 124 LYMPKDQGSKMHRGIGFITFASSDSVENLM-AETHELGGSTV 161
             +  D+ +  HRG GF+TF S D VE +     HE+    V
Sbjct: 141 AMLMFDKTTNRHRGFGFVTFESEDIVEKVCEIHFHEINNKMV 179

[Close]

BLAST of MS003632 vs. ExPASy Swiss-Prot
Match: O94432 (Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPBC660.15 PE=4 SV=1)

HSP 1 Score: 112.1 bits (279), Expect = 1.3e-23
Identity = 50/150 (33.33%), Postives = 89/150 (59.33%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ + G+ W+   + L+DY  +FGE+ DC VM++ +TGRSRGFG++TF   +     +S 
Sbjct: 164 KMFIGGLNWETTDDSLRDYFEQFGEVLDCTVMRDSTTGRSRGFGFLTFKNPKCVNEVMSK 223

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EH L  ++++ K A P+EE     ++  ++FV  +    TE  FR+ F ++G + D  + 
Sbjct: 224 EHHLDGKIIDPKRAIPREEQ----EKTAKMFVGGVPGDCTEEEFRNFFNQFGRVLDATLM 283

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETH 154
            D+ +   RG GF+T+ +  +VE  M++ +
Sbjct: 284 MDKDTGRPRGFGFVTYENESAVEATMSQPY 309

[Close]

BLAST of MS003632 vs. ExPASy TrEMBL
Match: A0A6J1D811 (RNA-binding protein Musashi homolog 1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111017885 PE=4 SV=1)

HSP 1 Score: 681.8 bits (1758), Expect = 1.5e-192
Identity = 338/346 (97.69%), Postives = 341/346 (98.55%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSS 183
           KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVV+    +DDDFRPIGKMAQGSS
Sbjct: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVDRATPKDDDFRPIGKMAQGSS 183

Query: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR 243
           GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR
Sbjct: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR 243

Query: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303
           QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL
Sbjct: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303

Query: 304 DDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           DDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD
Sbjct: 304 DDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 349

[Close]

BLAST of MS003632 vs. ExPASy TrEMBL
Match: A0A6J1D8F7 (RNA-binding protein Musashi homolog 1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111017885 PE=4 SV=1)

HSP 1 Score: 674.5 bits (1739), Expect = 2.4e-190
Identity = 337/347 (97.12%), Postives = 340/347 (97.98%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSS 183
           KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVV+    +DDDFRPIGKMAQGSS
Sbjct: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVDRATPKDDDFRPIGKMAQGSS 183

Query: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYG-RRELRGMGKKIFVGRLPQEASSDDL 243
           GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYG  RELRGMGKKIFVGRLPQEASSDDL
Sbjct: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGIGRELRGMGKKIFVGRLPQEASSDDL 243

Query: 244 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 303
           RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP
Sbjct: 244 RQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATP 303

Query: 304 LDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           LDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD
Sbjct: 304 LDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350

[Close]

BLAST of MS003632 vs. ExPASy TrEMBL
Match: A0A1S3C728 (RNA-binding protein Musashi homolog 1 OS=Cucumis melo OX=3656 GN=LOC103497417 PE=4 SV=1)

HSP 1 Score: 644.4 bits (1661), Expect = 2.7e-181
Identity = 321/347 (92.51%), Postives = 332/347 (95.68%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWD+DTEGL++YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQGSS 183
           KDQGSK HRGIGFITFASSDSVENLMA+THELGGSTVVV+    +DDDFRPIGKM QG  
Sbjct: 124 KDQGSKTHRGIGFITFASSDSVENLMADTHELGGSTVVVDRATPKDDDFRPIGKMPQGGG 183

Query: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDDLR 243
           GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS+DDLR
Sbjct: 184 GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADDLR 243

Query: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303
           QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL
Sbjct: 244 QYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSATPL 303

Query: 304 DDAGAPTGA-GASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           DDAGA  GA GASG+FMMNSAA+SFGGY  GPMRTYGRMYGSLDFDD
Sbjct: 304 DDAGAGAGASGASGTFMMNSAADSFGGY-VGPMRTYGRMYGSLDFDD 349

[Close]

BLAST of MS003632 vs. ExPASy TrEMBL
Match: A0A0A0LMN9 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285910 PE=4 SV=1)

HSP 1 Score: 637.5 bits (1643), Expect = 3.3e-179
Identity = 320/349 (91.69%), Postives = 331/349 (94.84%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWD+DTEGL++YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDVDTEGLREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQ+VTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQTVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQ--G 183
           KDQGSK HRGIGFITFASSDSVENLMA+THELGGS VVV+    +DDDFRPIGKM Q  G
Sbjct: 124 KDQGSKTHRGIGFITFASSDSVENLMADTHELGGSNVVVDRATPKDDDFRPIGKMPQGGG 183

Query: 184 SSGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSDD 243
             GGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE RGMGKKIFVGRLPQEAS+DD
Sbjct: 184 GGGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRREFRGMGKKIFVGRLPQEASADD 243

Query: 244 LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT 303
           LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT
Sbjct: 244 LRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSAT 303

Query: 304 PLDDAGAPTGA-GASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           PLDDAGA  GA GASG+FMMNSAA+SFGGY  GPMRTYGRMYGSLDFDD
Sbjct: 304 PLDDAGAGAGASGASGTFMMNSAADSFGGY-VGPMRTYGRMYGSLDFDD 351

[Close]

BLAST of MS003632 vs. ExPASy TrEMBL
Match: A0A6J1I7Z8 (heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111471691 PE=4 SV=1)

HSP 1 Score: 631.7 bits (1628), Expect = 1.8e-177
Identity = 316/349 (90.54%), Postives = 326/349 (93.41%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWDIDTE L++YMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS
Sbjct: 4   KLVVLGIPWDIDTEALREYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNRMMEVK+ATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP
Sbjct: 64  EHFLGNRMMEVKIATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDFRPIGKMAQ--- 183
           KDQGSK+HRGIGFITFASS+SVE+LMAETHELGGSTVVV+    +DDDFRPIGKM Q   
Sbjct: 124 KDQGSKIHRGIGFITFASSESVESLMAETHELGGSTVVVDRATPKDDDFRPIGKMPQGGG 183

Query: 184 GSSGGGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRELRGMGKKIFVGRLPQEASSD 243
           G  GGGYGAYNAYISAATRYAALGAPTLYDHPG VYGRRE RGMGKKIFVGRLPQEAS+D
Sbjct: 184 GGGGGGYGAYNAYISAATRYAALGAPTLYDHPGPVYGRREFRGMGKKIFVGRLPQEASAD 243

Query: 244 DLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 303
           DLRQYFGRFGRILDVYVPKDPKRS HRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA
Sbjct: 244 DLRQYFGRFGRILDVYVPKDPKRSSHRGFGFVTFAEDGVADRVSRRSHEICGQQVAIDSA 303

Query: 304 TPLDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           TPLDD      AGASGSFMMNSAAESFGGY  GPMRTYGRMYGSLDFDD
Sbjct: 304 TPLDDEAGAGAAGASGSFMMNSAAESFGGY-AGPMRTYGRMYGSLDFDD 351

[Close]

BLAST of MS003632 vs. TAIR 10
Match: AT4G36960.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 508.8 bits (1309), Expect = 3.4e-144
Identity = 258/360 (71.67%), Postives = 296/360 (82.22%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWDID++GLKDYMSKFG+LEDCIVMK+RSTGRSRGFGYVTFA+ EDAKNAL  
Sbjct: 4   KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKG 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNR++EVKVATPKEEMR P K+VTRIFVARI  SV+E+ FRSHFE+YGEITDLYMP
Sbjct: 64  EHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDF----RPIGKMA 183
           KD  SK HRGIGFITF+S+DSVE+LM +TH+LGG+TV V+    ++DD      P+ +M+
Sbjct: 124 KDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVARMS 183

Query: 184 Q------GSSG--GGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKIF 243
           +      G  G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G KIF
Sbjct: 184 RPPVAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGNKIF 243

Query: 244 VGRLPQEASSDDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHE 303
           VGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RRSHE
Sbjct: 244 VGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHE 303

Query: 304 ICGQQVAIDSATPLDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           ICGQ+VAIDSATPLD+AG   GA    S + +S  E FGGY GGPMR +GRMYG +  DD
Sbjct: 304 ICGQEVAIDSATPLDEAGPSAGA---SSMLSSSRPEYFGGY-GGPMRAFGRMYGGMSLDD 359

[Close]

BLAST of MS003632 vs. TAIR 10
Match: AT4G36960.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 508.8 bits (1309), Expect = 3.4e-144
Identity = 258/360 (71.67%), Postives = 296/360 (82.22%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ VLGIPWDID++GLKDYMSKFG+LEDCIVMK+RSTGRSRGFGYVTFA+ EDAKNAL  
Sbjct: 4   KLVVLGIPWDIDSDGLKDYMSKFGDLEDCIVMKDRSTGRSRGFGYVTFASAEDAKNALKG 63

Query: 64  EHFLGNRMMEVKVATPKEEMRAPPKRVTRIFVARISQSVTEAAFRSHFEKYGEITDLYMP 123
           EHFLGNR++EVKVATPKEEMR P K+VTRIFVARI  SV+E+ FRSHFE+YGEITDLYMP
Sbjct: 64  EHFLGNRILEVKVATPKEEMRQPAKKVTRIFVARIPSSVSESDFRSHFERYGEITDLYMP 123

Query: 124 KDQGSKMHRGIGFITFASSDSVENLMAETHELGGSTVVVNILYCQDDDF----RPIGKMA 183
           KD  SK HRGIGFITF+S+DSVE+LM +TH+LGG+TV V+    ++DD      P+ +M+
Sbjct: 124 KDYNSKQHRGIGFITFSSADSVEDLMEDTHDLGGTTVAVDRATPKEDDHPPRPPPVARMS 183

Query: 184 Q------GSSG--GGYGAYNAYISAATRYAALGAPTLYDHPGSVYGRRE--LRGMGKKIF 243
           +      G  G  GGYGAY+AYISAATRYAALGAPTLYD+P + YGR E   RG+G KIF
Sbjct: 184 RPPVAIAGGFGAPGGYGAYDAYISAATRYAALGAPTLYDNPATFYGRGEPTTRGIGNKIF 243

Query: 244 VGRLPQEASSDDLRQYFGRFGRILDVYVPKDPKRSGHRGFGFVTFAEDGVADRVSRRSHE 303
           VGRLPQEAS DDLR YFGRFG I D Y+PKDPKRSGHRGFGFVTFAE+GVADRV+RRSHE
Sbjct: 244 VGRLPQEASVDDLRDYFGRFGHIQDAYIPKDPKRSGHRGFGFVTFAENGVADRVARRSHE 303

Query: 304 ICGQQVAIDSATPLDDAGAPTGAGASGSFMMNSAAESFGGYGGGPMRTYGRMYGSLDFDD 350
           ICGQ+VAIDSATPLD+AG   GA    S + +S  E FGGY GGPMR +GRMYG +  DD
Sbjct: 304 ICGQEVAIDSATPLDEAGPSAGA---SSMLSSSRPEYFGGY-GGPMRAFGRMYGGMSLDD 359

[Close]

BLAST of MS003632 vs. TAIR 10
Match: AT3G07810.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 128.6 bits (322), Expect = 9.5e-30
Identity = 64/174 (36.78%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ + GI WD + E LK+Y S FGE+ + +++K+R+TGR+RGFG+V FA    A+  ++ 
Sbjct: 7   KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66

Query: 64  EHFLGNRMMEVKVATPKEEMR--------------APPKRVTRIFVARISQSVTEAAFRS 123
           +H +  R++E K A P+++                  P R  +IFV  +  SVTE+ F++
Sbjct: 67  KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKT 126

Query: 124 HFEKYGEITDLYMPKDQGSKMHRGIGFITFASSDSVENLMAET-HELGGSTVVV 163
           +FE++G  TD+ +  D  ++  RG GFIT+ S ++VE ++ +T HEL G  V V
Sbjct: 127 YFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

[Close]

BLAST of MS003632 vs. TAIR 10
Match: AT3G07810.2 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 128.6 bits (322), Expect = 9.5e-30
Identity = 64/174 (36.78%), Postives = 105/174 (60.34%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ + GI WD + E LK+Y S FGE+ + +++K+R+TGR+RGFG+V FA    A+  ++ 
Sbjct: 7   KLFIGGISWDTNEERLKEYFSSFGEVIEAVILKDRTTGRARGFGFVVFADPAVAEIVITE 66

Query: 64  EHFLGNRMMEVKVATPKEEMR--------------APPKRVTRIFVARISQSVTEAAFRS 123
           +H +  R++E K A P+++                  P R  +IFV  +  SVTE+ F++
Sbjct: 67  KHNIDGRLVEAKKAVPRDDQNMVNRSNSSSIQGSPGGPGRTRKIFVGGLPSSVTESDFKT 126

Query: 124 HFEKYGEITDLYMPKDQGSKMHRGIGFITFASSDSVENLMAET-HELGGSTVVV 163
           +FE++G  TD+ +  D  ++  RG GFIT+ S ++VE ++ +T HEL G  V V
Sbjct: 127 YFEQFGTTTDVVVMYDHNTQRPRGFGFITYDSEEAVEKVLLKTFHELNGKMVEV 180

[Close]

BLAST of MS003632 vs. TAIR 10
Match: AT4G26650.1 (RNA-binding (RRM/RBD/RNP motifs) family protein )

HSP 1 Score: 125.6 bits (314), Expect = 8.1e-29
Identity = 63/179 (35.20%), Postives = 105/179 (58.66%), Query Frame = 0


Query: 4   KIQVLGIPWDIDTEGLKDYMSKFGELEDCIVMKERSTGRSRGFGYVTFATDEDAKNALSS 63
           K+ + GI WD D E L++Y  K+G+L + ++M++R+TGR+RGFG++ FA    A+  +  
Sbjct: 16  KLFIGGISWDTDEERLQEYFGKYGDLVEAVIMRDRTTGRARGFGFIVFADPSVAERVIMD 75

Query: 64  EHFLGNRMMEVKVATPKEEMR-----APP--------------KRVTRIFVARISQSVTE 123
           +H +  R +E K A P+++ +     A P               R  +IFV  +  S+TE
Sbjct: 76  KHIIDGRTVEAKKAVPRDDQQVLKRHASPMHLISPSHGGNGGGARTKKIFVGGLPSSITE 135

Query: 124 AAFRSHFEKYGEITDLYMPKDQGSKMHRGIGFITFASSDSVENLMAET-HELGGSTVVV 163
           A F+++F+++G I D+ +  D  ++  RG GFITF S +SV+ ++ +T HEL G  V V
Sbjct: 136 AEFKNYFDQFGTIADVVVMYDHNTQRPRGFGFITFDSEESVDMVLHKTFHELNGKMVEV 194

The following BLAST results are available for this feature:

BLAST of MS003632 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022149462.1	3.1e-192	97.69	RNA-binding protein Musashi homolog 1 isoform X2 [Momordica charantia]	[more]
XP_022149461.1	5.0e-190	97.12	RNA-binding protein Musashi homolog 1 isoform X1 [Momordica charantia]	[more]
XP_038877270.1	2.2e-182	93.37	RNA-binding protein Musashi homolog 1 [Benincasa hispida] >XP_038877271.1 RNA-bi...	[more]
XP_008457826.1	5.5e-181	92.51	PREDICTED: RNA-binding protein Musashi homolog 1 [Cucumis melo] >XP_008457827.1 ...	[more]
XP_011649346.1	6.8e-179	91.69	RNA-binding protein Musashi homolog 1 isoform X2 [Cucumis sativus] >XP_031737421...	[more]

BLAST of MS003632 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8W034	1.8e-25	31.37	Heterogeneous nuclear ribonucleoprotein 1 OS=Arabidopsis thaliana OX=3702 GN=RNP...	[more]
O43347	2.6e-24	38.27	RNA-binding protein Musashi homolog 1 OS=Homo sapiens OX=9606 GN=MSI1 PE=1 SV=1	[more]
Q61474	3.4e-24	38.27	RNA-binding protein Musashi homolog 1 OS=Mus musculus OX=10090 GN=Msi1 PE=1 SV=1	[more]
Q8K3P4	3.4e-24	38.27	RNA-binding protein Musashi homolog 1 OS=Rattus norvegicus OX=10116 GN=Msi1 PE=1...	[more]
O94432	1.3e-23	33.33	Uncharacterized RNA-binding protein C660.15 OS=Schizosaccharomyces pombe (strain...	[more]

BLAST of MS003632 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1D811	1.5e-192	97.69	RNA-binding protein Musashi homolog 1 isoform X2 OS=Momordica charantia OX=3673 ...	[more]
A0A6J1D8F7	2.4e-190	97.12	RNA-binding protein Musashi homolog 1 isoform X1 OS=Momordica charantia OX=3673 ...	[more]
A0A1S3C728	2.7e-181	92.51	RNA-binding protein Musashi homolog 1 OS=Cucumis melo OX=3656 GN=LOC103497417 PE...	[more]
A0A0A0LMN9	3.3e-179	91.69	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G285910 PE=4 SV=1	[more]
A0A6J1I7Z8	1.8e-177	90.54	heterogeneous nuclear ribonucleoprotein D-like-B isoform X1 OS=Cucurbita maxima ...	[more]

BLAST of MS003632 vs. TAIR 10


Match Name	E-value	Identity	Description
AT4G36960.1	3.4e-144	71.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G36960.2	3.4e-144	71.67	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.1	9.5e-30	36.78	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT3G07810.2	9.5e-30	36.78	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]
AT4G26650.1	8.1e-29	35.20	RNA-binding (RRM/RBD/RNP motifs) family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000504	RNA recognition motif domain	SMART	SM00360	rrm1_1	coord: 4..75 e-value: 3.7E-20 score: 83.0 coord: 92..163 e-value: 2.6E-17 score: 73.5 coord: 227..298 e-value: 4.1E-16 score: 69.5
IPR000504	RNA recognition motif domain	PFAM	PF00076	RRM_1	coord: 93..151 e-value: 4.8E-11 score: 42.3 coord: 8..63 e-value: 9.6E-14 score: 51.0 coord: 228..282 e-value: 3.5E-13 score: 49.2
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 226..302 score: 16.193136
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 3..79 score: 15.408587
IPR000504	RNA recognition motif domain	PROSITE	PS50102	RRM	coord: 91..169 score: 13.907712
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 84..170 e-value: 8.3E-19 score: 69.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 4..83 e-value: 7.5E-23 score: 82.6
IPR012677	Nucleotide-binding alpha-beta plait domain superfamily	GENE3D	3.30.70.330		coord: 224..306 e-value: 9.5E-21 score: 75.7
None	No IPR available	PANTHER	PTHR48027	HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN 87F-RELATED	coord: 4..349
None	No IPR available	PANTHER	PTHR48027:SF15	OS01G0945800 PROTEIN	coord: 4..349
None	No IPR available	CDD	cd12322	RRM2_TDP43	coord: 226..301 e-value: 9.35618E-30 score: 106.968
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 87..188
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 4..88
IPR035979	RNA-binding domain superfamily	SUPERFAMILY	54928	RNA-binding domain, RBD	coord: 226..322

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003632.1	MS003632.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003676	nucleic acid binding