MS003561 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCTGCAAAGGTCCTTGACACGTTTGGTGTATCTTATGAGGTTAGTTTTTTATTTTTCATGATTGACATACATATATAATATATTTCTGACCTGCTACTTTTTTTCAAAAAATACGCAGATAAAGATAGTTTCTGCTCATCGGACCCCTGATTGGATGTTCTCTTACGCGTCATCTGCCCAGGAGAGAGGGATCCAGATTATCATTGCTGGTGCTGGGGGTGCAGCCCATTTACCAGGCTAGTCATTTAAAGGCTTCCTTTATAGTATATTGTATTTGGATAGAACAAACGATCAGATTACATTAATTCCAAAGGGCTGGTGAAGTGGATAAAATTTGCTTGATTAAGTGATCCTGGGTTCAAAAGTACTTGGGTAACTGGTTATTGCATGTTGTAAATTCAGGGGATAGTTGATTGTTCTTCGTGTAAATCTGGTATACAAAGAAATGATGGGGGTTTATGTATTTATTTTCTCAAAAGTAGGAAATTTCTCATTAGCAGCTGGTAGCTGGATTTTCAGGAATGGTTGCCTCTCTATGATGGGGGTTTATGTATTTATTTTCTCAAAAGTAGGAAATTTCTCATTAGCAGCTGGTAGCTGGATTTTCAGGAATGGTTGCCTCTCTATGATGGGGGTTTATGTATTTATTTTCTCAAAAGTAGGAAATTTCTCATTAGCAGCTGGTAGCTGGATTTTCAGGAATGGTTGCCTCTCTTACTCCGTTGCCTGTTATTGGTGTCCCTGTGCGTGCTTCGGCGTTGGATGGACTTGATTCTCTTCTATCAATTGTGCAGGTAATTTCATTTTGGTCTCAAAATAATCTCTGTCGTCTTTGGTTTCTTTAACAATTTTTAATGACAGATAATCACAAACTTTGGTGCATTTTTGAAGATCAATTGATGTAATTTGTGATTGAACATTTCTTCATTTTGTCCTTTTTCTTAAGGGCAAGCTTTTAAATGAATGTTCTGGTATAAGAGAATATATTGGTTTTGTACAATTGATAAGTTTTAGTTTTGCAAGTAGACGGCAGGTTTATTAACGTAGAACTTGCTTAATGGAAAACGGGATTGTACTCTGATAGGCCCAGGATAGTTTCAACCATACTCTTCCTTCTGGTATAACTTTCTTCCTAAGGACTGCATGACCTTTGGGATGTATTTTGGTGGTAAATGGTAATATTCTATGTAATAACATTATTATCTGCTTTTGGCAATTATTTGTGCCAATTATTCGTTCCCGTTTCACAAGTGTCTTCCCATATGCAGTATTTATGATTGTTTAAGGTCTGGTCTTGCAGATGCCGAGGGGGGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGCTTGTTGGCAGTAAGGATGTTGGGAGTGGCAGATGCAGATCTAGTCTCAAGGTGCTGCTCCTATCATATATNGTACAGAAAGTCTTATGATATATGTTTGCAGTTGGTGACAACACCGTTAATGTGCAGGATGAGCCAGTTTCAAGAAGACACGAAGAAAAATGTGTTGAGTAAGGCAGAAAAGTTGGAGAAAGATGGTTGGGATCTG ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCTGCAAAGGTCCTTGACACGTTTGGTGTATCTTATGAGATAAAGATAGTTTCTGCTCATCGGACCCCTGATTGGATGTTCTCTTACGCGTCATCTGCCCAGGAGAGAGGGATCCAGATTATCATTGCTGGTGCTGGGGGAATGGTTGCCTCTCTTACTCCGTTGCCTGTTATTGGTGTCCCTGTGCGTGCTTCGGCGTTGGATGGACTTGATTCTCTTCTATCAATTGTGCAGATGCCGAGGGGGGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGCTTGTTGGCAGTAAGGATGTTGGGAGTGGCAGATGCAGATCTAGTCTCAAGGTGCTGCTCCTATCATATATNGTACAGAAAGTCTTATGATATATGTTTGCAGTTGGTGACAACACCGTTAATGTGCAGGATGAGCCAGTTTCAAGAAGACACGAAGAAAAATGTGTTGAGTAAGGCAGAAAAGTTGGAGAAAGATGGTTGGGATCTG ATGGGCTCTGATTCGGATTTTCCTGTAATGAGAGATGCTGCAAAGGTCCTTGACACGTTTGGTGTATCTTATGAGATAAAGATAGTTTCTGCTCATCGGACCCCTGATTGGATGTTCTCTTACGCGTCATCTGCCCAGGAGAGAGGGATCCAGATTATCATTGCTGGTGCTGGGGGAATGGTTGCCTCTCTTACTCCGTTGCCTGTTATTGGTGTCCCTGTGCGTGCTTCGGCGTTGGATGGACTTGATTCTCTTCTATCAATTGTGCAGATGCCGAGGGGGGTTCCGGTTGCTACTGTTGCAATCAATAACGCAACCAATGCTGGCTTGTTGGCAGTAAGGATGTTGGGAGTGGCAGATGCAGATCTAGTCTCAAGGTGCTGCTCCTATCATATATNGTACAGAAAGTCTTATGATATATGTTTGCAGTTGGTGACAACACCGTTAATGTGCAGGATGAGCCAGTTTCAAGAAGACACGAAGAAAAATGTGTTGAGTAAGGCAGAAAAGTTGGAGAAAGATGGTTGGGATCTG MGSDSDFPVMRDAAKVLDTFGVSYEIKIVSAHRTPDWMFSYASSAQERGIQIIIAGAGGMVASLTPLPVIGVPVRASALDGLDSLLSIVQMPRGVPVATVAINNATNAGLLAVRMLGVADADLVSRCCSYHIXYRKSYDICLQLVTTPLMCRMSQFQEDTKKNVLSKAEKLEKDGWDL Homology
BLAST of MS003561 vs. NCBI nr
Match: XP_022152441.1 (phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X4 [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 8.5e-69 Identity = 152/184 (82.61%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of MS003561 vs. NCBI nr
Match: XP_022152438.1 (phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1 [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 8.5e-69 Identity = 152/184 (82.61%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of MS003561 vs. NCBI nr
Match: XP_022152440.1 (phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X3 [Momordica charantia]) HSP 1 Score: 270.8 bits (691), Expect = 8.5e-69 Identity = 152/184 (82.61%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of MS003561 vs. NCBI nr
Match: KAA0037050.1 (phosphoribosylaminoimidazole carboxylase [Cucumis melo var. makuwa] >TYK06601.1 phosphoribosylaminoimidazole carboxylase [Cucumis melo var. makuwa]) HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67 Identity = 148/184 (80.43%), Postives = 151/184 (82.07%), Query Frame = 0
BLAST of MS003561 vs. NCBI nr
Match: XP_008441168.1 (PREDICTED: phosphoribosylaminoimidazole carboxylase, chloroplastic isoform X1 [Cucumis melo]) HSP 1 Score: 266.2 bits (679), Expect = 2.1e-67 Identity = 148/184 (80.43%), Postives = 151/184 (82.07%), Query Frame = 0
BLAST of MS003561 vs. ExPASy Swiss-Prot
Match: P55195 (Phosphoribosylaminoimidazole carboxylase, chloroplastic (Fragment) OS=Vigna aconitifolia OX=3918 GN=PURKE PE=2 SV=1) HSP 1 Score: 209.9 bits (533), Expect = 2.3e-53 Identity = 116/183 (63.39%), Postives = 136/183 (74.32%), Query Frame = 0
BLAST of MS003561 vs. ExPASy Swiss-Prot
Match: Q9WYS7 (N5-carboxyaminoimidazole ribonucleotide mutase OS=Thermotoga maritima (strain ATCC 43589 / DSM 3109 / JCM 10099 / NBRC 100826 / MSB8) OX=243274 GN=purE PE=1 SV=1) HSP 1 Score: 172.9 bits (437), Expect = 3.2e-42 Identity = 96/182 (52.75%), Postives = 123/182 (67.58%), Query Frame = 0
BLAST of MS003561 vs. ExPASy Swiss-Prot
Match: O58058 (N5-carboxyaminoimidazole ribonucleotide mutase OS=Pyrococcus horikoshii (strain ATCC 700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3) OX=70601 GN=purE PE=3 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 3.5e-41 Identity = 91/183 (49.73%), Postives = 125/183 (68.31%), Query Frame = 0
BLAST of MS003561 vs. ExPASy Swiss-Prot
Match: P15567 (Phosphoribosylaminoimidazole carboxylase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=ade6 PE=3 SV=1) HSP 1 Score: 168.3 bits (425), Expect = 7.8e-41 Identity = 97/182 (53.30%), Postives = 117/182 (64.29%), Query Frame = 0
BLAST of MS003561 vs. ExPASy Swiss-Prot
Match: O74197 (Phosphoribosylaminoimidazole carboxylase OS=Candida glabrata (strain ATCC 2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) OX=284593 GN=ADE2 PE=3 SV=2) HSP 1 Score: 167.2 bits (422), Expect = 1.7e-40 Identity = 98/183 (53.55%), Postives = 119/183 (65.03%), Query Frame = 0
BLAST of MS003561 vs. ExPASy TrEMBL
Match: A0A6J1DHR3 (AIR carboxylase OS=Momordica charantia OX=3673 GN=LOC111020171 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 4.1e-69 Identity = 152/184 (82.61%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of MS003561 vs. ExPASy TrEMBL
Match: A0A6J1DDY0 (AIR carboxylase OS=Momordica charantia OX=3673 GN=LOC111020171 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 4.1e-69 Identity = 152/184 (82.61%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of MS003561 vs. ExPASy TrEMBL
Match: A0A6J1DEV3 (AIR carboxylase OS=Momordica charantia OX=3673 GN=LOC111020171 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 4.1e-69 Identity = 152/184 (82.61%), Postives = 152/184 (82.61%), Query Frame = 0
BLAST of MS003561 vs. ExPASy TrEMBL
Match: A0A5D3C3X4 (AIR carboxylase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold453G00690 PE=3 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67 Identity = 148/184 (80.43%), Postives = 151/184 (82.07%), Query Frame = 0
BLAST of MS003561 vs. ExPASy TrEMBL
Match: A0A1S4DTU8 (AIR carboxylase OS=Cucumis melo OX=3656 GN=LOC103485386 PE=3 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 1.0e-67 Identity = 148/184 (80.43%), Postives = 151/184 (82.07%), Query Frame = 0
BLAST of MS003561 vs. TAIR 10
Match: AT2G37690.1 (phosphoribosylaminoimidazole carboxylase, putative / AIR carboxylase, putative ) HSP 1 Score: 212.6 bits (540), Expect = 2.6e-55 Identity = 115/183 (62.84%), Postives = 136/183 (74.32%), Query Frame = 0
BLAST of MS003561 vs. TAIR 10
Match: AT2G05140.1 (phosphoribosylaminoimidazole carboxylase family protein / AIR carboxylase family protein ) HSP 1 Score: 205.7 bits (522), Expect = 3.1e-53 Identity = 113/183 (61.75%), Postives = 134/183 (73.22%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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