MS003520 (gene) Bitter gourd (TR) v1

Overview


Name	MS003520
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	50S ribosomal protein-like protein
Location	scaffold234: 3266809 .. 3267282 (+)
RNA-Seq Expression	MS003520
Synteny	MS003520

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTACCGTTGCTGGAAGCCCTACCCGAAGCCCCACCGCTAGCCCCGTAATTCACCTCCGCCGCCGCCGCCGAAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCGCCGATCCTCAAGATGTCGACGACGAGGAGGACGATGAGAATATGATTCCCGAGAAAAATGAGAAGGAGGTCAGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGGGAGATGATAAGGTCTCCGATAGGAGAATCGAAGAGCAGGAGGGATTGTTAACGGCGTCTAACACCAGCGCCGCCGGAATCGGTACCTCCACCACTCGCCGCTCCCTGAGGCCGATATCGTCGACATTCCGTTACAGATTTCTCCGACGAGCTTGGCGTCCGGTGCTCGTCGCCATTCCCGAG

mRNA sequence

ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTACCGTTGCTGGAAGCCCTACCCGAAGCCCCACCGCTAGCCCCGTAATTCACCTCCGCCGCCGCCGCCGAAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCGCCGATCCTCAAGATGTCGACGACGAGGAGGACGATGAGAATATGATTCCCGAGAAAAATGAGAAGGAGGTCAGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGGGAGATGATAAGGTCTCCGATAGGAGAATCGAAGAGCAGGAGGGATTGTTAACGGCGTCTAACACCAGCGCCGCCGGAATCGGTACCTCCACCACTCGCCGCTCCCTGAGGCCGATATCGTCGACATTCCGTTACAGATTTCTCCGACGAGCTTGGCGTCCGGTGCTCGTCGCCATTCCCGAG

Coding sequence (CDS)

ATGGCTACCTTGCATAAATTCAAGCTCTTAGCCTCCCAATGTACCGTTGCTGGAAGCCCTACCCGAAGCCCCACCGCTAGCCCCGTAATTCACCTCCGCCGCCGCCGCCGAAAAACCCTAAGAATGCTCCTCAATCGCACCGATCGCCGCCGATTTCCCTATCAAGATAACTCCGCCGATCCTCAAGATGTCGACGACGAGGAGGACGATGAGAATATGATTCCCGAGAAAAATGAGAAGGAGGTCAGAGCCAGGCGGAAACTCAAGGATTTGTTCGTCTCCTCGCCGCCGGGAGATGATAAGGTCTCCGATAGGAGAATCGAAGAGCAGGAGGGATTGTTAACGGCGTCTAACACCAGCGCCGCCGGAATCGGTACCTCCACCACTCGCCGCTCCCTGAGGCCGATATCGTCGACATTCCGTTACAGATTTCTCCGACGAGCTTGGCGTCCGGTGCTCGTCGCCATTCCCGAG

Protein sequence

MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSADPQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTSAAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE

Homology

[Close]

BLAST of MS003520 vs. NCBI nr
Match: XP_022134107.1 (uncharacterized protein LOC111006461 [Momordica charantia])

HSP 1 Score: 301.2 bits (770), Expect = 5.2e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS
Sbjct: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120

Query: 121 AAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 158

[Close]

BLAST of MS003520 vs. NCBI nr
Match: XP_023546418.1 (uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 276.6 bits (706), Expect = 1.4e-70
Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC V GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDD++DDENMIPEKN+KEVRARRKLKDLFVSSPP +DKVSDRRIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINAS 120

Query: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of MS003520 vs. NCBI nr
Match: XP_022990769.1 (uncharacterized protein LOC111487551 [Cucurbita maxima])

HSP 1 Score: 275.4 bits (703), Expect = 3.1e-70
Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC V GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDASAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDD++DDENMIPEKN+KEVRARRKLKDLFVSSPP +D VSDRRIEEQEGLLTA NTS
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDTVSDRRIEEQEGLLTAINTS 120

Query: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of MS003520 vs. NCBI nr
Match: XP_022960038.1 (uncharacterized protein LOC111460905 [Cucurbita moschata])

HSP 1 Score: 275.0 bits (702), Expect = 4.0e-70
Identity = 146/159 (91.82%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC V GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDD++DDENMIPEKN+KEV+ARRKLKDLFVSSPP +DKVSDRRIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVQARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINAS 120

Query: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of MS003520 vs. NCBI nr
Match: KAG6602699.1 (hypothetical protein SDJN03_07932, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 274.6 bits (701), Expect = 5.2e-70
Identity = 146/159 (91.82%), Postives = 151/159 (94.97%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC V GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDD++DDENMIPEKN+KEVRARRKLKDLFVSSPP +DKVSD RIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDNRIEEQEGLLTAINAS 120

Query: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of MS003520 vs. ExPASy TrEMBL
Match: A0A6J1BYN1 (uncharacterized protein LOC111006461 OS=Momordica charantia OX=3673 GN=LOC111006461 PE=4 SV=1)

HSP 1 Score: 301.2 bits (770), Expect = 2.5e-78
Identity = 158/158 (100.00%), Postives = 158/158 (100.00%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS
Sbjct: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120

Query: 121 AAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 158

[Close]

BLAST of MS003520 vs. ExPASy TrEMBL
Match: A0A6J1JSX9 (uncharacterized protein LOC111487551 OS=Cucurbita maxima OX=3661 GN=LOC111487551 PE=4 SV=1)

HSP 1 Score: 275.4 bits (703), Expect = 1.5e-70
Identity = 147/159 (92.45%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC V GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDASAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDD++DDENMIPEKN+KEVRARRKLKDLFVSSPP +D VSDRRIEEQEGLLTA NTS
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVRARRKLKDLFVSSPPLEDTVSDRRIEEQEGLLTAINTS 120

Query: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of MS003520 vs. ExPASy TrEMBL
Match: A0A6J1H7N8 (uncharacterized protein LOC111460905 OS=Cucurbita moschata OX=3662 GN=LOC111460905 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 1.9e-70
Identity = 146/159 (91.82%), Postives = 152/159 (95.60%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC V GSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQD SAD
Sbjct: 1   MATLHKFKLLASQCAVTGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDTSAD 60

Query: 61  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNTS 120
           PQDVDD++DDENMIPEKN+KEV+ARRKLKDLFVSSPP +DKVSDRRIEEQEGLLTA N S
Sbjct: 61  PQDVDDDDDDENMIPEKNDKEVQARRKLKDLFVSSPPLEDKVSDRRIEEQEGLLTAINAS 120

Query: 121 AAGIG-TSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           AAGIG TSTTRRSLRPIS+TFRYRFLRRAWRPVLVAIPE
Sbjct: 121 AAGIGTTSTTRRSLRPISTTFRYRFLRRAWRPVLVAIPE 159

[Close]

BLAST of MS003520 vs. ExPASy TrEMBL
Match: A0A6J1JYC4 (uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414 PE=4 SV=1)

HSP 1 Score: 265.0 bits (676), Expect = 2.0e-67
Identity = 142/160 (88.75%), Postives = 150/160 (93.75%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC VAG PT+SPTASPV HLRRRRRKTLRMLLNRTDRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60

Query: 61  PQDV-DDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNT 120
           PQDV DD++DD+NMIPEKN+KEVRARRKLKDLFVSSPP +DKVSDRRIEEQE LLT +NT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGT-STTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           SAAGIGT S TRRSLRPIS+TFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of MS003520 vs. ExPASy TrEMBL
Match: A0A6J1FG66 (uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC111445119 PE=4 SV=1)

HSP 1 Score: 263.1 bits (671), Expect = 7.6e-67
Identity = 141/160 (88.12%), Postives = 149/160 (93.12%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDNSAD 60
           MATLHKFKLLASQC VAG PT+SPTASPV HLRRRRRKTLRMLLNR DRRRFPYQDNSAD
Sbjct: 1   MATLHKFKLLASQCAVAGCPTQSPTASPVFHLRRRRRKTLRMLLNRADRRRFPYQDNSAD 60

Query: 61  PQDV-DDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPGDDKVSDRRIEEQEGLLTASNT 120
           PQDV DD++DD+NMIPEKN+KEVRARRKLKDLFVSSPP +DKVSDRRIEEQE LLT +NT
Sbjct: 61  PQDVDDDDDDDDNMIPEKNDKEVRARRKLKDLFVSSPPLEDKVSDRRIEEQEALLTTANT 120

Query: 121 SAAGIGT-STTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
           SAAGIGT S TRRSLRPIS+TFRYRFLRRAWRPVLV IPE
Sbjct: 121 SAAGIGTPSITRRSLRPISATFRYRFLRRAWRPVLVTIPE 160

[Close]

BLAST of MS003520 vs. TAIR 10
Match: AT1G66890.1 (FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: 50S ribosomal protein-related (TAIR:AT5G16200.1); Has 36 Blast hits to 36 proteins in 7 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 36; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 96.3 bits (238), Expect = 2.4e-20
Identity = 79/173 (45.66%), Postives = 97/173 (56.07%), Query Frame = 0


Query: 3   TLHKFKLLASQC-TVAGSPTRSPTASPVIHLRRRRRKTLRMLLNR-TDRRRFPYQDNSAD 62
           +L KFKLLA+ C TVA SPTR    SPVIHL  RRRKTLR+LL R +DR R P   N+ D
Sbjct: 2   SLQKFKLLATHCSTVAESPTR----SPVIHL--RRRKTLRLLLTRSSDRWRLPEIQNNVD 61

Query: 63  PQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPP--------GDDKVSDRRIEEQEG 122
                D+             ++R+ RKL DLFVSSPP        G DK +   +E +  
Sbjct: 62  ESKKTDKRG-----------KIRSSRKLGDLFVSSPPFEESGGGGGGDKGTKMEVEMERD 121

Query: 123 LLTASNTSAAGIGTSTTRR------SLRPISS-TFRYRFLRRAWRPVLVAIPE 159
           +     ++ AG G   T R      S+RP+SS T R R LRR+WRPVLV IPE
Sbjct: 122 VPVNGVSNNAGFGEEITARRVGFNGSVRPMSSVTLRCRLLRRSWRPVLVTIPE 157

[Close]

BLAST of MS003520 vs. TAIR 10
Match: AT5G16200.1 (50S ribosomal protein-related )

HSP 1 Score: 81.3 bits (199), Expect = 7.9e-16
Identity = 68/168 (40.48%), Postives = 90/168 (53.57%), Query Frame = 0


Query: 1   MATLHKFKLLAS----QCTVAGSPTRSPTASPVIHLRRRRRKTLRMLLNRT--DRRRFPY 60
           ++ LHKFKL A+    + + AGSPT SPT SPV +L  RRRKTLRML +++   RRR   
Sbjct: 3   LSRLHKFKLFAAHRSLEASTAGSPTMSPTKSPVFNL--RRRKTLRMLFDKSSDSRRRNLR 62

Query: 61  QDNSADPQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVS--SPPGDDKVSDRRIEEQEG 120
           Q     P      E D N   +K       RRKL++L V+  SPP   +     I E+  
Sbjct: 63  QILEESP------ESDGNSGNKKRGNHRATRRKLRELLVTSPSPPYKGREDIDGIGEERS 122

Query: 121 LLTASNTSAAGIGTSTTRRSLRPISS--TFRYRFLRRAWRPVLVAIPE 159
            ++  N ++ G G   T R      S  +FR R LR+ WRPVLV+IPE
Sbjct: 123 EISPLNVTSNGDGRELTARRFGSSGSVQSFRLRILRKPWRPVLVSIPE 162

[Close]

BLAST of MS003520 vs. TAIR 10
Match: AT1G68430.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 21 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT1G66890.1); Has 35 Blast hits to 35 proteins in 6 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 35; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 58.2 bits (139), Expect = 7.2e-09
Identity = 58/167 (34.73%), Postives = 82/167 (49.10%), Query Frame = 0


Query: 1   MATLHKFKLLASQCTVAG-SPTRSPT--ASPVIHLRRRRRKTLRMLLNRTDRRRFPYQDN 60
           MATL +FK L +QC VA  SPTRSP+   SP++ L RR++ TL+MLL+     R      
Sbjct: 1   MATLQRFKFLGTQCGVAAQSPTRSPSPRTSPLVQL-RRKKTTLKMLLSLASPSR------ 60

Query: 61  SADPQDVDDEEDDENMIPEKNEKEVRARRKLKDLFVSSPPG------DDKVSDRRIEEQE 120
                       ++  +   + K+V A RKLKDLFVSS         D++   +  EE  
Sbjct: 61  -----------REQQPLIHHHHKDV-AGRKLKDLFVSSSSAEEEQEEDERPKGKTKEEVL 120

Query: 121 GLLTASNTSAAGIGTSTTRRSLRPISSTFRYRFLRRAWRPVLVAIPE 159
             + A   +A+ +   +      P+   F  R L+RAWRP L  I E
Sbjct: 121 AAMAAKLNAASRLQCESA--DAAPVWFGFSKRLLQRAWRPKLGTIHE 146

The following BLAST results are available for this feature:

BLAST of MS003520 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134107.1	5.2e-78	100.00	uncharacterized protein LOC111006461 [Momordica charantia]	[more]
XP_023546418.1	1.4e-70	92.45	uncharacterized protein LOC111805523 [Cucurbita pepo subsp. pepo]	[more]
XP_022990769.1	3.1e-70	92.45	uncharacterized protein LOC111487551 [Cucurbita maxima]	[more]
XP_022960038.1	4.0e-70	91.82	uncharacterized protein LOC111460905 [Cucurbita moschata]	[more]
KAG6602699.1	5.2e-70	91.82	hypothetical protein SDJN03_07932, partial [Cucurbita argyrosperma subsp. sorori...	[more]

BLAST of MS003520 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS003520 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYN1	2.5e-78	100.00	uncharacterized protein LOC111006461 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1JSX9	1.5e-70	92.45	uncharacterized protein LOC111487551 OS=Cucurbita maxima OX=3661 GN=LOC111487551...	[more]
A0A6J1H7N8	1.9e-70	91.82	uncharacterized protein LOC111460905 OS=Cucurbita moschata OX=3662 GN=LOC1114609...	[more]
A0A6J1JYC4	2.0e-67	88.75	uncharacterized protein LOC111489414 OS=Cucurbita maxima OX=3661 GN=LOC111489414...	[more]
A0A6J1FG66	7.6e-67	88.13	uncharacterized protein LOC111445119 OS=Cucurbita moschata OX=3662 GN=LOC1114451...	[more]

BLAST of MS003520 vs. TAIR 10


Match Name	E-value	Identity	Description
AT1G66890.1	2.4e-20	45.66	FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknow...	[more]
AT5G16200.1	7.9e-16	40.48	50S ribosomal protein-related	[more]
AT1G68430.1	7.2e-09	34.73	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 112..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 75..111
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 46..129
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 60..74
None	No IPR available	PANTHER	PTHR34542	OS08G0359900 PROTEIN	coord: 1..158
None	No IPR available	PANTHER	PTHR34542:SF6	50S RIBOSOMAL-LIKE PROTEIN	coord: 1..158

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003520.1	MS003520.1	mRNA