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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. TTCATCAACCCTGCTCGCCAGACGCCGCCACAGCGGACCGATGGTTTTCGTGCCCTTTTTACTCCCGCCAAATCCCGCAACCGGTTATCGCCG mRNA sequence TTCATCAACCCTGCTCGCCAGACGCCGCCACAGCGGACCGATGGTTTTCGTGCCCTTTTTACTCCCGCCAAATCCCGCAACCGGTTATCGCCG Coding sequence (CDS) TTCATCAACCCTGCTCGCCAGACGCCGCCACAGCGGACCGATGGTTTTCGTGCCCTTTTTACTCCCGCCAAATCCCGCAACCGGTTATCGCCG Protein sequence FINPARQTPPQRTDGFRALFTPAKSRNRLSP
Homology
BLAST of MS003507 vs. ExPASy TrEMBL
Match: A0A5D3BUS4 (Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00400 PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.9e-04 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query: 2 INPARQTPPQRTDGFRALFTPAKSRNRLSP 32
I+ AR TPPQ+TD FRAL TPAKSRNRLSP
Sbjct: 5 IDSARHTPPQQTDDFRALTTPAKSRNRLSP 34
BLAST of MS003507 vs. ExPASy TrEMBL
Match: A0A5A7U5C5 (Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold511G00060 PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.9e-04 Identity = 24/30 (80.00%), Postives = 26/30 (86.67%), Query Frame = 0
Query: 2 INPARQTPPQRTDGFRALFTPAKSRNRLSP 32
I+ AR TPPQ+TD FRAL TPAKSRNRLSP
Sbjct: 5 IDSARHTPPQQTDDFRALTTPAKSRNRLSP 34
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| Match Name | E-value | Identity | Description | |
|---|
| A0A5D3BUS4 | 8.9e-04 | 80.00 | Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E5676... | [more] |
| A0A5A7U5C5 | 8.9e-04 | 80.00 | Putative histone chaperone ASF1A OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 1..31 |
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS003507.1 | MS003507.1 | mRNA |
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