MS003501 (gene) Bitter gourd (TR) v1

Overview


Name	MS003501
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ABC transporter-like protein
Location	scaffold234: 3155228 .. 3159286 (+)
RNA-Seq Expression	MS003501
Synteny	MS003501

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

GTTAGGGATTTAAGCTATCGACCTCCAGGGACTGAGCTTGCTCTTCTCGATGCAGTTAATTTTTCCCTTCGAGAGAAAAGGTACAATTTTCTGCTCTCATTTCAAGGTATATATTTTGGTAATATAGTACGACGAAGGGTTCGAATTTCTGCTTGTTAATGAATTGGTTATTAGCGACAAGCTTGACTAGGATTGAGAGGGACGGTTTGATTTAACTCCCTAATAACGAGCATGGACGGGAAAATGGCTTTAGAAGTTGATGAATGAATAAAATACTTTTCTGAGGCCTAAAATTTTCTTCATCTCTAATAATTAAATGAAGCAATTCAGCTTGGCTAACCTCTATTTACTATCAAGGCACTTATGAAGGACTTGTCTGTCCTTCCAGCCGTTTAGGAATAAAGGGTTTTCATTTACATATTTCTAACTTGGACTTCTTCCCTAATATTTCTCTCTCAGTTTATTAATGCACCCGTATACTTCATTACATTTCCCTTATTAGTTTGCTTTTCTGTTGATTATGCAGTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGAAAAACTACTTTATTGCAGGTTAAGCTATTTTCTTAGACTTTTAAGTGAATTTGGCCTTCCCTTACTTTTTCCATGTCTCTTTTATTTACTTATTATTGGTTAGTTGTTTATGGGTATGCTATTCTTTCTTCTTCAACATTCTGTGTATCCTCTTTCTTCTCTAGCTTCTTGCAGGTCTGAGCAAACCAACTTCGGGTTCCATTTACGCCCAAAAATATGATAAAGAGGGAAAACCATGTCAGTCTTCTCAACCATTATCCCCTGAGAGAGTTGGTATTGTCTTTCAATTTCCAGAGAGGTATCGTCTATTTTGGTTGGCCATGTGTTGAAACTAGTGTAGAGTATTATTGAAATATTATTATAAGAAGCATTACAAAAGCTGGGATGCTTTAAATTTTATAGTATACGGGAAACACTTGCATTAATCAATAAAAGTTTGTAGGAAGGCTACTGAATAATGAGCTTATAGATAGACTCTTGAATTGACAATAGACATTCTAGCCCACTTAATGGCCATAAAAATTGGCATTATCTCTAGTGACAAAGTTAATACGAATAGGAGACGAATGGGTGAATCTTAGTGGATCGTGGCAGCAAGGATACTCTTGTTCAATGGTTAATATGTACACCGACTTCTGAAATTGTCAAATTCTAGAACTTTTTAGTTTGTGATGTTTGTTGTCTGTATGTTTAGTTTCCCAAATAATCGAATGGCTCAATTCTGCTCTTATTCTCATACTTTTTCATCATTTATGGTTTATTATACGATAAGTTGCTGAAAATATTCTATTGCTCAACGTAGGTACTTTGTCACGGACAGTGTGCTTGATGAAGTCACATTTGGGTGGCCACGGCAAAAGATTGATTTTCATTTGAAGGAGCAACTTGCTTTGAGACTCCAAAGAGCAATTAATTGGGTACTTGCAATCTGTTTTCAGTATCAGTTGCTTACATTCGTTTCTTCTGTGATCAGAATACATGATTTTCATATCATAGCATAGGATTGCTTTACGCCTTTCTGCTGATGACTGTAGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTAAGTGGTGGCTACAAGCGTCGTCTTGCCTTGGCGATCCAATTGGTAAACCTAATTAACAAATTGAACTCATGTGAGCACCTTCACTTTGTGAAAAAAAAAGGAAAGACATGTTTGAATAAACTTTGGGCATTTTGTTAATCAGGAGTATGAATTGGAGAACAAAATAAACTGGTACTGTACTTTTTATACTAGGTCTAATCTAACAACTTTTAAAGTTAGGATTCTTGTTAAAGCTTAATTTTTTCTCTCTGAATAAAATAACTGATTATTGTTGAAAAATATTATTCAATATTAGGGGGTACTACGCCCCAAGGGCGGGTCTGTTGGCAAGGGCTTGGGGTCTCTGGGTCATATCGACTTAGGGTCTCAAGTTTGAACCTTCAAATGAGCTTAATACAAAAAATCTTTGATGTCTCTTGGGTTTGGGCCTCACGCCTGCCCCCAGAGATAGGGTAGCAAAGCTCCGACTCCCAGTTTTAAAAGAAATAAAAAAATTAAGGGTACTACAATAATAAATGAGCAACATGATTTTTGTTGCTGATGTGAATGGAAAATAACGCTTAATGCTAATATTCTTTCATCTGATTCTAATTCTAAATTAATTTGTTAAAGCATAATTAATATTTGTATTTTAATTCTCCATTATTGACTGTTCATTCTAATTGTGGTCCAGAACAATTCCTCTATGGTCAATGCAGTCTTTACGTTGTACCTTTCAAAATGCTTGTGTACCTGTAGACAGGAATAACATATACATTGAATAAGTAACTTCTTTTGCAGGTGCAAATCCCAGATCTGTTATTACTGGATGAGCCTCTGGCTGGTCTTGGTATGAATCAATTTAACAATCCTTATAAAAATAGTCTTACTGTCTGCTAAAGAAGTTGAGTGTCTTGCAAACTTAGCGATTCAATAAAATTGGACATCCAACTAAGGAAATTCTGGATCACTCAATTCTCGTATTTCTGTTGACTTGATGGCACTTTTATCATTGACAGTTCAGGAATTTAAGGTCTTGATTATGTCATTGATCAAATCAGAAGGCTAGAATGAATAAGCTTATGTTCCAAGTTTTTTTAAGTTATTTAAGCTTGGGTTCTCGTTTGCCCTTGCCTTTCAGTTATTTTTGTCAATATTTTCCCGGAAACAATGGTTTTTTAAAAAGAAAATTTCCATTATTTTTATAAGGATTGATTTCATATTACTTCATTCTTATGTGAATTTTATATTTATGATATATAAGTCTTAGTATATGATGCTTCTTTTCAAAATGTAGGATGTAACTTGGGCTTATGCTTTTTTTTTTAATGCTCCTTAGTTCTTATATGGTAGATTGGAAGGCTCGTGCTGACATTGTGAAGCTCTTAAAGAATCTAAAGAAAGACTTAACTGTACTTGTCGTCAGCCATGATCTCAAGTTAGTCTGCTTTTTCACTCCTTCCAGCTTTGTTTTAACTGTTATTTATATTAGTTTATTCTCTTGTCAAAAGGAAAGGGGGAAAAAGACTATGATTTTTTAAGTTACGTGGCCAGTTTAATTAGATTGGGTTCAGAGAAAGAAATGACAATTTTAAGCTCTCTGATGTTCTATACATGGATTGAATCTCTTCATTCAACTTGACCTCAGATTTGTTACTTTTCTGATAGCTACAGTAATATGGAAAGCTGATGAGACTTTTTTTTTTAATTAATTTTTTAGTAATAACAACATTGATGTAGCATGAAAAATGATCTAGAAAATATCCTCTCCTCAATTTCACCTGTTGCTCACAACGTCAATGACATTCTCAAATCTCAACATTAATTTCCTAGTGAATAATCATAACATTTTAGCCATGTCTTAGCCCTGAATAGTCTTAGACTATTTTCTATGCCAAGTACCTTCAGTTGGGTGATCATCTTGGTGAGTCGTATTCAGTATTCTATGAATAATAATACTTCTCTTTTAAATTTCTGTTCCTCACTTAACTTGGGTGAGAACTTTTAGGTGCGTCTCGATTCTAGACAACCACTAGTTCTCAGCGTGCCAGATCTAGTAAAAACAGTGAAAGACCTTAAAACTTTTTATACATCTCGTTCTGATTAATTTACCATGATGTTGCATCCATATTTGGCAATAAAATAAGCGTTACACTCAATGTGTTGGAAGGGTAGCAAGTTATTCTGAAATTTGATATTTGTTAGAGTCAAGTTTATTGCACTAAATCTAATGCAACTGCATTTCATTTCTTCTACCAACATCTGGTAAAGGTCATTATTGCCACTTTTTTCATTTTGTGTTTAAGCTGTTCTAATTATTTGATAAAGGCGTTCCTGTTCACTTATATAGTTGTGTTCCTTTCAGAGAGTTTGCTGGCTTAGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAAGCTCTACCTATT

mRNA sequence

GTTAGGGATTTAAGCTATCGACCTCCAGGGACTGAGCTTGCTCTTCTCGATGCAGTTAATTTTTCCCTTCGAGAGAAAAGTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGAAAAACTACTTTATTGCAGCTTCTTGCAGGTCTGAGCAAACCAACTTCGGGTTCCATTTACGCCCAAAAATATGATAAAGAGGGAAAACCATGTCAGTCTTCTCAACCATTATCCCCTGAGAGAGTTGGTATTGTCTTTCAATTTCCAGAGAGGTACTTTGTCACGGACAGTGTGCTTGATGAAGTCACATTTGGGTGGCCACGGCAAAAGATTGATTTTCATTTGAAGGAGCAACTTGCTTTGAGACTCCAAAGAGCAATTAATTGGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTAAGTGGTGGCTACAAGCGTCGTCTTGCCTTGGCGATCCAATTGGTGCAAATCCCAGATCTGTTATTACTGGATGAGCCTCTGGCTGGTCTTGATTGGAAGGCTCGTGCTGACATTGTGAAGCTCTTAAAGAATCTAAAGAAAGACTTAACTGTACTTGTCGTCAGCCATGATCTCAAAGAGTTTGCTGGCTTAGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAAGCTCTACCTATT

Coding sequence (CDS)

GTTAGGGATTTAAGCTATCGACCTCCAGGGACTGAGCTTGCTCTTCTCGATGCAGTTAATTTTTCCCTTCGAGAGAAAAGTTTTGGGTTAATTTTTGGACAGAGTGGAAGTGGAAAAACTACTTTATTGCAGCTTCTTGCAGGTCTGAGCAAACCAACTTCGGGTTCCATTTACGCCCAAAAATATGATAAAGAGGGAAAACCATGTCAGTCTTCTCAACCATTATCCCCTGAGAGAGTTGGTATTGTCTTTCAATTTCCAGAGAGGTACTTTGTCACGGACAGTGTGCTTGATGAAGTCACATTTGGGTGGCCACGGCAAAAGATTGATTTTCATTTGAAGGAGCAACTTGCTTTGAGACTCCAAAGAGCAATTAATTGGGTGGGATTAAATGGCATAGCCTTGGACAAAGATCCTCACTCTCTAAGTGGTGGCTACAAGCGTCGTCTTGCCTTGGCGATCCAATTGGTGCAAATCCCAGATCTGTTATTACTGGATGAGCCTCTGGCTGGTCTTGATTGGAAGGCTCGTGCTGACATTGTGAAGCTCTTAAAGAATCTAAAGAAAGACTTAACTGTACTTGTCGTCAGCCATGATCTCAAAGAGTTTGCTGGCTTAGTTGACTATTCATGGAGAATGGAAATGGGCGGTGTTCTTAGAGAAGAAGCTCTACCTATT

Protein sequence

VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADIVKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI

Homology

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BLAST of MS003501 vs. NCBI nr
Match: XP_022134480.1 (ABC transporter I family member 11, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 455.7 bits (1171), Expect = 2.4e-124
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ
Sbjct: 49  VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 108

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR
Sbjct: 109 KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 168

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI
Sbjct: 169 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 228

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI
Sbjct: 229 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 274

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BLAST of MS003501 vs. NCBI nr
Match: XP_038886122.1 (ABC transporter I family member 11, chloroplastic [Benincasa hispida])

HSP 1 Score: 422.9 bits (1086), Expect = 1.7e-114
Identity = 206/226 (91.15%), Postives = 218/226 (96.46%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LL+AVNFSLREKSFGLIFGQSGSGKTTLLQLLAGL+KPTSGSIY Q
Sbjct: 49  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLNKPTSGSIYVQ 108

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KYDK+GKPCQSSQPL+PERVGIVFQFPERYF+TDSVLDEVTFGWPR+K DF LKE L+LR
Sbjct: 109 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLDEVTFGWPRKKSDFRLKENLSLR 168

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGIALDKDP+SLSGGYKRRLALAIQLV+IPDLL+LDEPLAGLDWKAR D+
Sbjct: 169 LQRAINWVGLNGIALDKDPYSLSGGYKRRLALAIQLVEIPDLLILDEPLAGLDWKARTDV 228

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREE L I
Sbjct: 229 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEPLRI 274

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BLAST of MS003501 vs. NCBI nr
Match: XP_008441309.1 (PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis melo] >XP_008441310.1 PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis melo] >TYK02723.1 ABC transporter I family member 11 [Cucumis melo var. makuwa])

HSP 1 Score: 422.2 bits (1084), Expect = 2.9e-114
Identity = 205/226 (90.71%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LL+AVNFSLREKSFGLIFG SGSGKTTLLQLLAGLSKPTSGSI  Q
Sbjct: 48  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQLLAGLSKPTSGSICVQ 107

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KYDK+GKPCQSSQPL+PERVGIVFQFPERYF+TDSVL+EVTFGWPRQ+ DFHLKE LA++
Sbjct: 108 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMK 167

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLL+LDEPLAGLDWKAR D+
Sbjct: 168 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 227

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVL+VSHDLKEFAGLVD SWRMEMGGVLREE LPI
Sbjct: 228 VKLLKNLKKDLTVLIVSHDLKEFAGLVDNSWRMEMGGVLREEPLPI 273

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BLAST of MS003501 vs. NCBI nr
Match: XP_023550676.1 (ABC transporter I family member 11, chloroplastic [Cucurbita pepo subsp. pepo] >XP_023550677.1 ABC transporter I family member 11, chloroplastic [Cucurbita pepo subsp. pepo])

HSP 1 Score: 419.1 bits (1076), Expect = 2.5e-113
Identity = 205/226 (90.71%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LLD VNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIY Q
Sbjct: 50  VRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 109

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KY K+ KPCQSSQPL+ +RVGIVFQFPERYFV D+VLDEVTFGWPRQK D +LK+ LALR
Sbjct: 110 KYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALR 169

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLLLLDEPLAGLDWKARAD+
Sbjct: 170 LQRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADV 229

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALP+
Sbjct: 230 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of MS003501 vs. NCBI nr
Match: KAG6578362.1 (ABC transporter I family member 11, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia] >KAG7015946.1 ABC transporter I family member 11, chloroplastic [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 419.1 bits (1076), Expect = 2.5e-113
Identity = 205/226 (90.71%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LLD VNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIY Q
Sbjct: 50  VRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 109

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KY K+ KPCQSSQPL+ +RVGIVFQFPERYFV D+VLDEVTFGWPRQK D +LK+ LALR
Sbjct: 110 KYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALR 169

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLLLLDEPLAGLDWKARAD+
Sbjct: 170 LQRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADV 229

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALP+
Sbjct: 230 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

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BLAST of MS003501 vs. ExPASy Swiss-Prot
Match: Q8LEF6 (ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=ABCI11 PE=2 SV=1)

HSP 1 Score: 338.2 bits (866), Expect = 7.2e-92
Identity = 167/226 (73.89%), Postives = 187/226 (82.74%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRD+ YRPPGT+L +L+ VNFSLREKSFGLIFG+SGSGKTTLLQLLAGL+KPTSGSI  Q
Sbjct: 53  VRDVCYRPPGTQLNILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQ 112

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
            Y  +G+P      L  E+VGIVFQFPER+FV D+VLDE+TFGWPRQK    LKEQL   
Sbjct: 113 GYGDDGQPKADPDLLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSN 172

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRA NWVGL+ I LDKDP  LSGGYKRRLALAIQLVQ PDLL+LDEPLAGLDWKARAD+
Sbjct: 173 LQRAFNWVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADV 232

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
            KLLK+LKK+LT+LVVSHDL+E A LVD SWRME GGVL  E  P+
Sbjct: 233 AKLLKHLKKELTLLVVSHDLRELAALVDQSWRMETGGVLVAERPPL 278

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BLAST of MS003501 vs. ExPASy Swiss-Prot
Match: A3DJK5 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostridium thermocellum (strain ATCC 27405 / DSM 1237 / JCM 9322 / NBRC 103400 / NCIMB 10682 / NRRL B-4536 / VPI 7372) OX=203119 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 5.8e-33
Identity = 86/216 (39.81%), Postives = 130/216 (60.19%), Query Frame = 0


Query: 12  ELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYDKEGKPCQS 71
           E   LD +N S+    F  I G +GSGK+TL+Q   GL KPTSGS+Y    +  G+  + 
Sbjct: 19  EKKALDNINLSIETGEFVGIIGHTGSGKSTLVQHFNGLLKPTSGSVYINGEELTGQRAKE 78

Query: 72  SQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQRAINWVGLN 131
            +    ++VGIVFQ+PE     ++V  ++ FG  R+  +   K+++  ++++ I  VGL+
Sbjct: 79  LK----KQVGIVFQYPEHQLFEETVYKDIAFGLVRRGEE---KDEIYRKVRKTIRLVGLS 138

Query: 132 GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADIVKLLKNLKKD- 191
              LDK P  LSGG KRR+A+A  LV  P +L+LDEP AGLD K R +I +L+ NL K+ 
Sbjct: 139 EDILDKSPFELSGGQKRRVAMAGILVLEPSILVLDEPAAGLDPKGREEIFELVSNLHKNN 198

Query: 192 -LTVLVVSHDLKEFAG-----LVDYSWRMEMGGVLR 221
            +TV++VSH +++ A      +V    R+EM G +R
Sbjct: 199 KMTVILVSHSMEDVAKYVQRVIVMNQGRIEMCGPVR 227

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BLAST of MS003501 vs. ExPASy Swiss-Prot
Match: Q97EK9 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 / LMG 5710 / VKM B-1787) OX=272562 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 137.1 bits (344), Expect = 2.4e-31
Identity = 85/232 (36.64%), Postives = 135/232 (58.19%), Query Frame = 0


Query: 1   VRDLSYR-PPGT--ELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSI 60
           + +L+Y   PGT  E   LD VN ++ +  F +  G +GSGK+TL+Q + GL KPTSGSI
Sbjct: 5   IENLTYTYMPGTPFEKKALDNVNITIEDGEFAVFIGHTGSGKSTLIQQINGLLKPTSGSI 64

Query: 61  YAQKYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQL 120
           +    D   K  + +     ++VG+VFQ+PE     +++  ++ FG     +    +E++
Sbjct: 65  FIDDVDITDKSVKLND--IRKKVGLVFQYPEYQLFEETIEKDIAFGPRNMGLS---EEEV 124

Query: 121 ALRLQRAINWVGLN-GIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKA 180
           + R+++A+  VGL      DK P  LSGG KRR+A+A  +   P +L+LDEP AGLD K 
Sbjct: 125 STRVKKAMKMVGLEYNDFKDKSPFELSGGQKRRVAIAGVVAMEPKVLILDEPTAGLDPKG 184

Query: 181 RADIVKLLKNLKKD--LTVLVVSHDLKEFAGLVD-----YSWRMEMGGVLRE 222
           R DI+  +K L+K+  +T+++VSH +++ A + D     Y  R  + G L E
Sbjct: 185 RDDILYEIKKLQKEYKMTIILVSHSMEDVAKVADKIFVMYDSRCILSGNLDE 231

[Close]

BLAST of MS003501 vs. ExPASy Swiss-Prot
Match: Q3JYF5 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus agalactiae serotype Ia (strain ATCC 27591 / A909 / CDC SS700) OX=205921 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-30
Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 0


Query: 14  ALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYDKEGKPCQSSQ 73
           AL D VN  + + S+    G +GSGK+T++QLL GL  PT G +    +  +        
Sbjct: 22  ALFD-VNLKIEDASYTAFIGHTGSGKSTIMQLLNGLHIPTKGEVIVDDFSIKAGDKNKEI 81

Query: 74  PLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQRAINWVGLNGI 133
               ++VG+VFQFPE     ++VL +V FG     I     E+LA   +  +  VG++  
Sbjct: 82  KFIRQKVGLVFQFPESQLFEETVLKDVAFGPQNFGISQIEAERLA---EEKLRLVGISED 141

Query: 134 ALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADIVKLLKNL-KKDLT 193
             DK+P  LSGG  RR+A+A  L   P +L+LDEP AGLD K R +++ L KNL KK +T
Sbjct: 142 LFDKNPFELSGGQMRRVAIAGILAMEPKVLVLDEPTAGLDPKGRKELMTLFKNLHKKGMT 201

Query: 194 VLVVSHDLKEFAGLVDYSWRMEMGGV 219
           +++V+H + + A   DY + +E G V
Sbjct: 202 IVLVTHLMDDVADYADYVYVLEAGKV 223

[Close]

BLAST of MS003501 vs. ExPASy Swiss-Prot
Match: Q8E2L3 (Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus agalactiae serotype III (strain NEM316) OX=211110 GN=ecfA2 PE=3 SV=1)

HSP 1 Score: 132.9 bits (333), Expect = 4.6e-30
Identity = 78/206 (37.86%), Postives = 116/206 (56.31%), Query Frame = 0


Query: 14  ALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYDKEGKPCQSSQ 73
           AL D VN  + + S+    G +GSGK+T++QLL GL  PT G +    +  +        
Sbjct: 22  ALFD-VNLKIEDASYTAFIGHTGSGKSTIMQLLNGLHIPTKGEVIVDDFSIKAGDKNKEI 81

Query: 74  PLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQRAINWVGLNGI 133
               ++VG+VFQFPE     ++VL +V FG     I     E+LA   +  +  VG++  
Sbjct: 82  KFIRQKVGLVFQFPESQLFEETVLKDVAFGPQNFGISQIEAERLA---EEKLRLVGISED 141

Query: 134 ALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADIVKLLKNL-KKDLT 193
             DK+P  LSGG  RR+A+A  L   P +L+LDEP AGLD K R +++ L KNL KK +T
Sbjct: 142 LFDKNPFELSGGQMRRVAIAGILAMEPKVLVLDEPTAGLDPKGRKELMTLFKNLHKKGMT 201

Query: 194 VLVVSHDLKEFAGLVDYSWRMEMGGV 219
           +++V+H + + A   DY + +E G V
Sbjct: 202 IVLVTHLMDDVADYADYVYVLEAGKV 223

[Close]

BLAST of MS003501 vs. ExPASy TrEMBL
Match: A0A6J1BYE6 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006715 PE=4 SV=1)

HSP 1 Score: 455.7 bits (1171), Expect = 1.1e-124
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ
Sbjct: 49  VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 108

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR
Sbjct: 109 KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 168

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI
Sbjct: 169 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 228

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI
Sbjct: 229 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 274

[Close]

BLAST of MS003501 vs. ExPASy TrEMBL
Match: A0A1S3B2P1 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucumis melo OX=3656 GN=LOC103485466 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 205/226 (90.71%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LL+AVNFSLREKSFGLIFG SGSGKTTLLQLLAGLSKPTSGSI  Q
Sbjct: 48  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQLLAGLSKPTSGSICVQ 107

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KYDK+GKPCQSSQPL+PERVGIVFQFPERYF+TDSVL+EVTFGWPRQ+ DFHLKE LA++
Sbjct: 108 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMK 167

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLL+LDEPLAGLDWKAR D+
Sbjct: 168 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 227

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVL+VSHDLKEFAGLVD SWRMEMGGVLREE LPI
Sbjct: 228 VKLLKNLKKDLTVLIVSHDLKEFAGLVDNSWRMEMGGVLREEPLPI 273

[Close]

BLAST of MS003501 vs. ExPASy TrEMBL
Match: A0A5D3BSR8 (ABC transporter I family member 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold1154G00210 PE=4 SV=1)

HSP 1 Score: 422.2 bits (1084), Expect = 1.4e-114
Identity = 205/226 (90.71%), Postives = 217/226 (96.02%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LL+AVNFSLREKSFGLIFG SGSGKTTLLQLLAGLSKPTSGSI  Q
Sbjct: 48  VRDLSYRPPGTEHSLLNAVNFSLREKSFGLIFGPSGSGKTTLLQLLAGLSKPTSGSICVQ 107

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KYDK+GKPCQSSQPL+PERVGIVFQFPERYF+TDSVL+EVTFGWPRQ+ DFHLKE LA++
Sbjct: 108 KYDKDGKPCQSSQPLTPERVGIVFQFPERYFITDSVLNEVTFGWPRQRSDFHLKENLAMK 167

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLL+LDEPLAGLDWKAR D+
Sbjct: 168 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLILDEPLAGLDWKARTDV 227

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVL+VSHDLKEFAGLVD SWRMEMGGVLREE LPI
Sbjct: 228 VKLLKNLKKDLTVLIVSHDLKEFAGLVDNSWRMEMGGVLREEPLPI 273

[Close]

BLAST of MS003501 vs. ExPASy TrEMBL
Match: A0A6J1FMX1 (ABC transporter I family member 11, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445651 PE=4 SV=1)

HSP 1 Score: 419.1 bits (1076), Expect = 1.2e-113
Identity = 205/226 (90.71%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LLD VNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIY Q
Sbjct: 50  VRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYVQ 109

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KY K+ KPCQSSQPL+ +RVGIVFQFPERYFV D+VLDEVTFGWPRQK D +LK+ LALR
Sbjct: 110 KYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALR 169

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLLLLDEPLAGLDWKARAD+
Sbjct: 170 LQRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADV 229

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALP+
Sbjct: 230 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of MS003501 vs. ExPASy TrEMBL
Match: A0A6J1JWU1 (ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489049 PE=4 SV=1)

HSP 1 Score: 418.7 bits (1075), Expect = 1.5e-113
Identity = 204/226 (90.27%), Postives = 214/226 (94.69%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRDLSYRPPGTE +LLD VNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGS+Y Q
Sbjct: 50  VRDLSYRPPGTEHSLLDTVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSVYVQ 109

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
           KY K+ KPCQSSQPL+ +RVGIVFQFPERYFV D+VLDEVTFGWPRQK D +LK+ LALR
Sbjct: 110 KYGKDDKPCQSSQPLTTDRVGIVFQFPERYFVADNVLDEVTFGWPRQKSDVYLKQDLALR 169

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRAINWVGLNGI LDKDPHSLSGGYKRRLALAIQLVQ PDLLLLDEPLAGLDWKARAD+
Sbjct: 170 LQRAINWVGLNGIPLDKDPHSLSGGYKRRLALAIQLVQFPDLLLLDEPLAGLDWKARADV 229

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
           VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALP+
Sbjct: 230 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPV 275

[Close]

BLAST of MS003501 vs. TAIR 10
Match: AT5G14100.1 (non-intrinsic ABC protein 14 )

HSP 1 Score: 338.2 bits (866), Expect = 5.1e-93
Identity = 167/226 (73.89%), Postives = 187/226 (82.74%), Query Frame = 0


Query: 1   VRDLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQ 60
           VRD+ YRPPGT+L +L+ VNFSLREKSFGLIFG+SGSGKTTLLQLLAGL+KPTSGSI  Q
Sbjct: 53  VRDVCYRPPGTQLNILNGVNFSLREKSFGLIFGKSGSGKTTLLQLLAGLNKPTSGSICIQ 112

Query: 61  KYDKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALR 120
            Y  +G+P      L  E+VGIVFQFPER+FV D+VLDE+TFGWPRQK    LKEQL   
Sbjct: 113 GYGDDGQPKADPDLLPTEKVGIVFQFPERFFVADNVLDEITFGWPRQKGSLQLKEQLTSN 172

Query: 121 LQRAINWVGLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADI 180
           LQRA NWVGL+ I LDKDP  LSGGYKRRLALAIQLVQ PDLL+LDEPLAGLDWKARAD+
Sbjct: 173 LQRAFNWVGLDSIPLDKDPQLLSGGYKRRLALAIQLVQTPDLLILDEPLAGLDWKARADV 232

Query: 181 VKLLKNLKKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLREEALPI 227
            KLLK+LKK+LT+LVVSHDL+E A LVD SWRME GGVL  E  P+
Sbjct: 233 AKLLKHLKKELTLLVVSHDLRELAALVDQSWRMETGGVLVAERPPL 278

[Close]

BLAST of MS003501 vs. TAIR 10
Match: AT4G33460.1 (ABC transporter family protein )

HSP 1 Score: 88.6 bits (218), Expect = 7.1e-18
Identity = 67/215 (31.16%), Postives = 113/215 (52.56%), Query Frame = 0


Query: 10  GTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYDKEGKPC 69
           G  + +L   +F +      +I G +G GK+TLL++LAG+  P+SG+++ +K        
Sbjct: 54  GISVPILRDCSFRIPSGQLWMILGPNGCGKSTLLKILAGVVNPSSGTVFVEK-------- 113

Query: 70  QSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQRAINWVG 129
                  P+    VFQ P+   V  +V  +V FG  +   D + +E++  R+ +A+  VG
Sbjct: 114 -------PK--NFVFQNPDHQVVMPTVEADVAFGLGKYH-DMN-QEEVKSRVIKALEAVG 173

Query: 130 LNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADIVKLLKNL-- 189
           +    + +   +LSGG K+R+A+A  L +   +LLLDE    LD   +  ++K +K+L  
Sbjct: 174 MRDY-MQRPIQTLSGGQKQRIAIAGALAEACKVLLLDELTTFLDESDQMGVIKAVKDLIN 233

Query: 190 --KKDLTVLVVSHDLKEFAGLVDYSWRMEMGGVLR 221
             K D+T L V+H L+E     D +  ME G V+R
Sbjct: 234 AKKGDVTALWVTHRLEELK-YADGAVYMENGRVVR 247

[Close]

BLAST of MS003501 vs. TAIR 10
Match: AT1G65410.1 (non-intrinsic ABC protein 11 )

HSP 1 Score: 84.3 bits (207), Expect = 1.3e-16
Identity = 69/216 (31.94%), Postives = 110/216 (50.93%), Query Frame = 0


Query: 12  ELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYDKEGKPCQS 71
           E  +L  V+F +R      + G SG+GK+T+L+++AGL  P  G +Y +   + G    S
Sbjct: 96  EKHILKGVSFKIRHGEAVGVIGPSGTGKSTILKIMAGLLAPDKGEVYIRGKKRAG--LIS 155

Query: 72  SQPLSPERVGIVFQFPERYFVTDSVLDEVTF-GWPRQKIDFHLKEQLALRLQRAINWVGL 131
            + +S  R+G+VFQ     F + SV + V F  + R K+    + Q++  + + +  VGL
Sbjct: 156 DEEISGLRIGLVFQ-SAALFDSLSVRENVGFLLYERSKMS---ENQISELVTQTLAAVGL 215

Query: 132 NGIALDKDPHSLSGGYKRRLALAIQL-------VQIPDLLLLDEPLAGLDWKARADIVKL 191
            G+  ++ P  LSGG K+R+ALA  L       V  P++LL DEP AGLD  A   +  L
Sbjct: 216 KGVE-NRLPSELSGGMKKRVALARSLIFDTTKEVIEPEVLLYDEPTAGLDPIASTVVEDL 275

Query: 192 LKNLK-----------KDLTVLVVSHDLKEFAGLVD 209
           ++++            K  + LVV+H        VD
Sbjct: 276 IRSVHMTDEDAVGKPGKIASYLVVTHQHSTIQRAVD 304

[Close]

BLAST of MS003501 vs. TAIR 10
Match: AT5G03910.1 (ABC2 homolog 12 )

HSP 1 Score: 83.6 bits (205), Expect = 2.3e-16
Identity = 62/204 (30.39%), Postives = 106/204 (51.96%), Query Frame = 0


Query: 3   DLSYRPPGTELALLDAVNFSLREKSFGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKY 62
           D+S++     L +LD +N  ++      + G SG GKTTL++LL  L +P+SGSI   K 
Sbjct: 400 DISFKYDENMLPVLDGLNLHIKAGETVALVGPSGGGKTTLIKLLLRLYEPSSGSIIIDKI 459

Query: 63  DKEGKPCQSSQPLSPERVGIVFQFPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQ 122
           D +    +S +    + VG+V Q  +    + ++ D + +      ID   + +LA +  
Sbjct: 460 DIKDIKLESLR----KHVGLVSQ--DTTLFSGTIADNIGYRDLTTGIDMK-RVELAAKTA 519

Query: 123 RAINWV-----GLNGIALDKDPHSLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKAR 182
            A  ++     G N   +     SLSGG K+RLA+A  L Q   +L+LDE  + LD  + 
Sbjct: 520 NADEFIRNLPEGYN-TGVGPRGSSLSGGQKQRLAIARALYQKSSILILDEATSALDSLSE 579

Query: 183 ADIVKLLKNLKKDLTVLVVSHDLK 202
             + + L+ + +D TV+V++H L+
Sbjct: 580 LLVREALERVMQDHTVIVIAHRLE 595

[Close]

BLAST of MS003501 vs. TAIR 10
Match: AT3G47740.1 (ABC2 homolog 2 )

HSP 1 Score: 77.8 bits (190), Expect = 1.2e-14
Identity = 56/188 (29.79%), Postives = 93/188 (49.47%), Query Frame = 0


Query: 28  FGLIFGQSGSGKTTLLQLLAGLSKPTSGSIYAQKYD--KEGKPCQSSQPLSPERVGIVFQ 87
           FG++ G +G+GKT+ + ++ GL KPTSG+ + Q  D  K+     +S  + P+       
Sbjct: 644 FGML-GPNGAGKTSFINMMTGLVKPTSGAAFVQGLDICKDMDRVYTSMGVCPQH------ 703

Query: 88  FPERYFVTDSVLDEVTFGWPRQKIDFHLKEQLALRLQRAI----NWVGL-NGIALDKDPH 147
                     +L E   G         LK    + L +A+      V L +G   DK   
Sbjct: 704 ---------DLLWETLTGREHLLFYGRLKNLKGVDLNQAVEESLRSVNLFHGGVADKPAG 763

Query: 148 SLSGGYKRRLALAIQLVQIPDLLLLDEPLAGLDWKARADIVKLLKNLKKDLTVLVVSHDL 207
             SGG KRRL++AI L+  P ++ +DEP  GLD  +R ++  ++KN K+   +++ +H +
Sbjct: 764 KYSGGMKRRLSVAISLIGNPKVVYMDEPSTGLDPASRKNLWTVIKNAKRHTAIILTTHSM 815

Query: 208 KEFAGLVD 209
           +E   L D
Sbjct: 824 EEAEFLCD 815

The following BLAST results are available for this feature:

BLAST of MS003501 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134480.1	2.4e-124	100.00	ABC transporter I family member 11, chloroplastic isoform X1 [Momordica charanti...	[more]
XP_038886122.1	1.7e-114	91.15	ABC transporter I family member 11, chloroplastic [Benincasa hispida]	[more]
XP_008441309.1	2.9e-114	90.71	PREDICTED: ABC transporter I family member 11, chloroplastic isoform X1 [Cucumis...	[more]
XP_023550676.1	2.5e-113	90.71	ABC transporter I family member 11, chloroplastic [Cucurbita pepo subsp. pepo] >...	[more]
KAG6578362.1	2.5e-113	90.71	ABC transporter I family member 11, chloroplastic, partial [Cucurbita argyrosper...	[more]

BLAST of MS003501 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q8LEF6	7.2e-92	73.89	ABC transporter I family member 11, chloroplastic OS=Arabidopsis thaliana OX=370...	[more]
A3DJK5	5.8e-33	39.81	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Hungateiclostrid...	[more]
Q97EK9	2.4e-31	36.64	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Clostridium acet...	[more]
Q3JYF5	4.6e-30	37.86	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus ag...	[more]
Q8E2L3	4.6e-30	37.86	Energy-coupling factor transporter ATP-binding protein EcfA2 OS=Streptococcus ag...	[more]

BLAST of MS003501 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYE6	1.1e-124	100.00	ABC transporter I family member 11, chloroplastic isoform X1 OS=Momordica charan...	[more]
A0A1S3B2P1	1.4e-114	90.71	ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucumis melo OX=...	[more]
A0A5D3BSR8	1.4e-114	90.71	ABC transporter I family member 11 OS=Cucumis melo var. makuwa OX=1194695 GN=E56...	[more]
A0A6J1FMX1	1.2e-113	90.71	ABC transporter I family member 11, chloroplastic OS=Cucurbita moschata OX=3662 ...	[more]
A0A6J1JWU1	1.5e-113	90.27	ABC transporter I family member 11, chloroplastic isoform X1 OS=Cucurbita maxima...	[more]

BLAST of MS003501 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G14100.1	5.1e-93	73.89	non-intrinsic ABC protein 14	[more]
AT4G33460.1	7.1e-18	31.16	ABC transporter family protein	[more]
AT1G65410.1	1.3e-16	31.94	non-intrinsic ABC protein 11	[more]
AT5G03910.1	2.3e-16	30.39	ABC2 homolog 12	[more]
AT3G47740.1	1.2e-14	29.79	ABC2 homolog 2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

Zoom :

x 1


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 25..217 e-value: 1.6E-6 score: 37.7
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 1..224 e-value: 3.9E-51 score: 176.0
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 1..219
IPR003439	ABC transporter-like, ATP-binding domain	PFAM	PF00005	ABC_tran	coord: 16..170 e-value: 2.6E-24 score: 86.3
IPR003439	ABC transporter-like, ATP-binding domain	PROSITE	PS50893	ABC_TRANSPORTER_2	coord: 1..226 score: 17.160332
None	No IPR available	PANTHER	PTHR43553:SF1	ABC TRANSPORTER I FAMILY MEMBER 11, CHLOROPLASTIC	coord: 1..222
None	No IPR available	PANTHER	PTHR43553	HEAVY METAL TRANSPORTER	coord: 1..222
IPR015856	ABC transporter, CbiO/EcfA subunit	CDD	cd03225	ABC_cobalt_CbiO_domain1	coord: 1..216 e-value: 7.24071E-46 score: 149.54

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003501.1	MS003501.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0055085	transmembrane transport
cellular_component	GO:0016020	membrane
molecular_function	GO:0005524	ATP binding