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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. CGGCCGGCGAGATTCTCCAGAACGATACCATCGGAGGCGGCGAAGAAGGCCAGAACGTGGGAGATGAAATGCTTTTCGTCGGCCGTGAGGCCTTCCCAATGGCGGAGGTCCTGTGAGAGGTCGACCTCCTCAGCGGTCCAGAACGAGGCCATGGCTTTCTTGTACATTTCCCATATC mRNA sequence CGGCCGGCGAGATTCTCCAGAACGATACCATCGGAGGCGGCGAAGAAGGCCAGAACGTGGGAGATGAAATGCTTTTCGTCGGCCGTGAGGCCTTCCCAATGGCGGAGGTCCTGTGAGAGGTCGACCTCCTCAGCGGTCCAGAACGAGGCCATGGCTTTCTTGTACATTTCCCATATC Coding sequence (CDS) CGGCCGGCGAGATTCTCCAGAACGATACCATCGGAGGCGGCGAAGAAGGCCAGAACGTGGGAGATGAAATGCTTTTCGTCGGCCGTGAGGCCTTCCCAATGGCGGAGGTCCTGTGAGAGGTCGACCTCCTCAGCGGTCCAGAACGAGGCCATGGCTTTCTTGTACATTTCCCATATC Protein sequence RPARFSRTIPSEAAKKARTWEMKCFSSAVRPSQWRRSCERSTSSAVQNEAMAFLYISHI
Homology
BLAST of MS003488 vs. ExPASy TrEMBL
Match: A0A0A0KP12 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524680 PE=4 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 5.4e-10 Identity = 44/60 (73.33%), Postives = 47/60 (78.33%), Query Frame = 0
Query: 1 RPARFSRTIPSEAAKK-ARTWEMKCFSSAVRPSQWRRSCERSTSSAVQNEAMAFLYISHI 60
R ARFS+TI SEAAKK ART MKCFSS ++ SQ RRS ERSTSS VQ EA AFLYIS I
Sbjct: 50 RSARFSKTIASEAAKKEARTCVMKCFSSELKQSQSRRSYERSTSSVVQKEAWAFLYISQI 109
BLAST of MS003488 vs. ExPASy TrEMBL
Match: A0A0A9IFI0 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 4.6e-09 Identity = 41/55 (74.55%), Postives = 42/55 (76.36%), Query Frame = 0
Query: 1 RPARFSRTIPSEAAKKARTWEMKCFSSA-VRPSQWRRSCERSTSSAVQNEAMAFL 55
R ARFS T+PSEAAKKARTWEMK SS SQWR S ERSTSSAVQ EA AFL
Sbjct: 3 REARFSSTMPSEAAKKARTWEMKWRSSGESASSQWRASAERSTSSAVQKEATAFL 57
BLAST of MS003488 vs. ExPASy TrEMBL
Match: A0A0A9I3F8 (Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1) HSP 1 Score: 67.4 bits (163), Expect = 2.3e-08 Identity = 40/55 (72.73%), Postives = 41/55 (74.55%), Query Frame = 0
Query: 1 RPARFSRTIPSEAAKKARTWEMKCFSSA-VRPSQWRRSCERSTSSAVQNEAMAFL 55
R ARFS T+PSEAAKKA TWEMK SS SQWR S ERSTSSAVQ EA AFL
Sbjct: 3 REARFSSTMPSEAAKKASTWEMKWRSSGESASSQWRASAERSTSSAVQKEATAFL 57
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| A0A0A0KP12 | 5.4e-10 | 73.33 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G524680 PE=4 SV=1 | [more] |
| A0A0A9IFI0 | 4.6e-09 | 74.55 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
| A0A0A9I3F8 | 2.3e-08 | 72.73 | Uncharacterized protein OS=Arundo donax OX=35708 PE=4 SV=1 | [more] |
| Match Name | E-value | Identity | Description | |
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Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
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| MS003488.1 | MS003488.1 | mRNA |
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