MS003478 (gene) Bitter gourd (TR) v1

Overview


Name	MS003478
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Ribulose-phosphate 3-epimerase
Location	scaffold234: 3065913 .. 3069411 (-)
RNA-Seq Expression	MS003478
Synteny	MS003478

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCCGATTTTGCCAATTTAGCTTCGGAGGCCGATCGAATGCTTAAACTTGGCGCGGATTGGCTTCACATGGATATTATGGTACACACACACACACACTCTCTCTCTCTCTCTGTTTCCTTTTTCACAGATTGTTATTTCTCTTCAGACTTCAGTTATAGTTTGGTGAAATACTTTTTGTTTGTTGCTCCCATTTTGTTCATTTTAATCCTAATTTTTATCTTCCGAGTCTGAGTTCCTACCATTCAGTTCTAATTTACTTTAATTGGTTCGGAATCTACTTGGCTTTAATGGTTTGAATCATATGATTTGTCTATGCTTTTCTGGGTCTTAAAACAATATTATATCAACACTATTTTAGAACCTTATTCCTAGTTCTAGTGGAAGGTATTCCATGGATTCTTTCAAGTATATTAACCCATTTACGACGACTGCATTTTTACCATCACTATCATTCCCTAATGTGGACTTTAAAGGATGAAGATTTTTGATCTTGTAGAAGTAATATGCCTTTCTCATGTATACTTGTACTCGTTAATTGGTTGATGAGAGTGTAGAGAAAGGAGCATGGAGGTGCATAATCAAACTAGTGATCTTATAATGACATGCTTACGAAGACGGGGTAGTGTAAAATTCTTCTCAAGTTGACGTGGGTCGTACAAACTGCAATTTCTGTGCACATTATGCTGATAAATTTATATGCCATCACATCTGATGTATCTTGTTGCTTTATTTGCAGGATGGGTAGGTTGATGCTTTGCTCATATCATACTCCTGTTGCCCTGCAATGTGCTTCATGTGAATTGGTTTGATTACTGTGGTTAATCTAACACCCGATCACTTGTTAAAAATAGGATTAAATTTTACCTGGAAATAACTTGACCTTGATCTTTTTGGTGTTGATTGCTTTTGGCATCAACTTTCTATCCAAATGTCACTGCTTATTTATTTGTAAATATTTGCTGAAGAAACTTGAGAAGCATCTAGTTTTTTAAAAGGCCTCAAACAGCGCGTGCTTAGGCATTGGTGAGATGCCTTGCCTTGTTGAGCGTGGACTTCTTGCTAAAATGCGATGCTTTTACTAGGGTCAATTTAAATTTTTAGAAAAGGGTTAACTTGAACAAAAGTCGTCTTGTACTACCTTGATAGGGATTTAAAAACTATTTTGATTGCCTTTAAGATCACAATGGACTTTTGTCTCACGTAATCAGAAGTCCTGTGTAACACTGAAAGATTCAATCAAGGTCTTCTTAGGGCATGCCTTTTCCATTCATTTTACATTATCACTTTTATAAGAGTTAAATGTATATTTTTATCTTAAAGTTTCCCATTTGGCACTATATATTGTTGACTTTGGTAATCTATTATGATATGTAATGTAAGGTATCTCATAATGTGCTTCTGTTCATGGAGATTAAAGGGTGCTTCTGTTGAAACTTGCATGGTGGCAGGGCTGTGAATCAGAAAAGTCAAAACTAATTAACTATTGTTAAAAAATATGAAGGCTATAGGATTTGATGTCTCGTGCCACGTTATCAACTGTCATTTTGGGAAGGATCAATGTCATTTTCTTGGTGGAACTGCTAATCTAATATTCTGCAGAAGATCTAGATGGGTCTACATTTATTTTTTGATGTAGCGTTTTATTTTGTATCAGTAATCTGTTGAACCTTTCTACTTCAGTTTAAGATTAACGACCATTAATTATCAAGAAAGTCTCAAAGTTATTTATTATTAATTTTTAAATACACCAATATGGTGTCCCCATGAGAATTTATTCATGATCATTTGGTTGAATTCACCCTGTAGCAGGAATATGCATTATTTCTTGGTGGTGTGATTTGTGCATGATCTGGATTACACAATTTTGGCTCGCTTTTCTCACTCTTAAAGTTTACATTGGGTTTATTTCCTGTCCCTAGCTAGCAAAGTGATTATTTTGTTGTCTATGCATTTACCACAGGCATTTTGTTCCAAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTGAGAAAACACACGAAGTAATATCATTGCTTATTCAGTTTCATGAATTTGATCTGAACTCCTTTTTTGCTAGTCAATTGTTAGAAGTTGGTGACATTACCATGACTTATTGAAGAATTATTTCTTTGTCATGCAGGGCATATCTAGATTGCCACCTTATGGTTACGAATCCACTTGATTACGTTGAACCCATGGCAAAAGCTGGTGCATCAGGTTTTACATTTCATGTTGAAGTATCCAAAGGTACATTTTGTTTTTGGACTTAAGATTTGTTCTAGTTCTATTACACAAAAATTTTCACTTTTTCTTTCCCTCTTTTCTCTTGTAGACAATTGGCAACAACTAATCCAAGAAATTAAGTCAAAGGGCATGAAGTCTGGGGTGGCGCTAAAACCTAAAACACCCATTGAAGAAGTTTATCCTCTGGTATGCAATTGATTTTCTAATTTACTCTCGATTTCATATCTTTCATTTACGTAAATGTTATATTTCAATGATGGGTTGTAAGATCCTATTCATCTGCATAACAAGGAAAGTGTTAATGGCTTTGTGCAAATGCTGCTACACCAAACTTTTGATCCTTGTTAATCGTTATTTCTTCAATCTTCAGGTAGAAAGTGACAATCCTGTAGAAATGGTCCTTGTTATGACAGTTGAACCTGGCTTTGGTGGGCAGAAGTTCATGCCAGAGACGATGGATAAGGTACCATTTTTGACATTTTCATAACTTGAGCAATGTTTGATTGACATCTCTTGTTGAATCTCCTTACCGATTTTCACTCATCCAGGTGCGGAAATTAAGACAGAAGTACCCATCTCTTGACATTGAGGTATCTCTCTCACTTTCTCCATATTTCTTTTAATTTTCTGCAACCTTCTAATGCATGTTTCTTTAAATTATTGGTTCCGTCAAAAAGTTCCCCTCACCCACCATATTATGAAACACGGAAAAATGTAGCCCCTCATTGGCATGCATACTTTTGTCGTCCAAAAAACTCTGCAAGCTGGAGACGAACTTGTTCATATATTTTCTTTGGTTCTATTTCATTCAATAGTAATTTGATATAAGAAGTCACTTCGGTACGAGCATCGTTTCAATCACCAGTCTTTTAACTTTTTAAGTCTTCATAGATTTTCCCCCATGTTCAAAACTTTGTTGAAAAGATTAAACTTATCTAGCAAATAGACTTTGGATGCGAACTCGATATAGTGTACTTGTTGTTCGTTGTAGTTCCAATTCAGTGTACAGATGGCTGTATGAGGGACAGTGTCAACTCAGTCATTTTTGGTTTGTTTGCCAGGTGGATGGCGGATTGGGACCTTCAACCATAGATGCAGCAGCTTCTGCTGGGGCGAATTGCATTGTTGCAGGAAGTTCTGTGTTCGGAGCTCCCGAGCCTTCCAAAGTTATCTCCATTCTGAGGAAAAGTGTTGAGGAGGCCCAACAAAATTGT

mRNA sequence

ATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCCGATTTTGCCAATTTAGCTTCGGAGGCCGATCGAATGCTTAAACTTGGCGCGGATTGGCTTCACATGGATATTATGGATGGGCATTTTGTTCCAAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTGAGAAAACACACGAAGGCATATCTAGATTGCCACCTTATGGTTACGAATCCACTTGATTACGTTGAACCCATGGCAAAAGCTGGTGCATCAGGTTTTACATTTCATGTTGAAGTATCCAAAGACAATTGGCAACAACTAATCCAAGAAATTAAGTCAAAGGGCATGAAGTCTGGGGTGGCGCTAAAACCTAAAACACCCATTGAAGAAGTTTATCCTCTGGTAGAAAGTGACAATCCTGTAGAAATGGTCCTTGTTATGACAGTTGAACCTGGCTTTGGTGGGCAGAAGTTCATGCCAGAGACGATGGATAAGGTGCGGAAATTAAGACAGAAGTACCCATCTCTTGACATTGAGGTGGATGGCGGATTGGGACCTTCAACCATAGATGCAGCAGCTTCTGCTGGGGCGAATTGCATTGTTGCAGGAAGTTCTGTGTTCGGAGCTCCCGAGCCTTCCAAAGTTATCTCCATTCTGAGGAAAAGTGTTGAGGAGGCCCAACAAAATTGT

Coding sequence (CDS)

ATGGGAGTAGCTGCGAAAATCGCACCGTCAATGCTATCCTCCGATTTTGCCAATTTAGCTTCGGAGGCCGATCGAATGCTTAAACTTGGCGCGGATTGGCTTCACATGGATATTATGGATGGGCATTTTGTTCCAAATCTGACAATTGGTGCTCCAGTCATCGAGAGTTTGAGAAAACACACGAAGGCATATCTAGATTGCCACCTTATGGTTACGAATCCACTTGATTACGTTGAACCCATGGCAAAAGCTGGTGCATCAGGTTTTACATTTCATGTTGAAGTATCCAAAGACAATTGGCAACAACTAATCCAAGAAATTAAGTCAAAGGGCATGAAGTCTGGGGTGGCGCTAAAACCTAAAACACCCATTGAAGAAGTTTATCCTCTGGTAGAAAGTGACAATCCTGTAGAAATGGTCCTTGTTATGACAGTTGAACCTGGCTTTGGTGGGCAGAAGTTCATGCCAGAGACGATGGATAAGGTGCGGAAATTAAGACAGAAGTACCCATCTCTTGACATTGAGGTGGATGGCGGATTGGGACCTTCAACCATAGATGCAGCAGCTTCTGCTGGGGCGAATTGCATTGTTGCAGGAAGTTCTGTGTTCGGAGCTCCCGAGCCTTCCAAAGTTATCTCCATTCTGAGGAAAAGTGTTGAGGAGGCCCAACAAAATTGT

Protein sequence

MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPKTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQNC

Homology

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BLAST of MS003478 vs. NCBI nr
Match: XP_022134370.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform [Momordica charantia])

HSP 1 Score: 452.2 bits (1162), Expect = 2.6e-123
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
           KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL
Sbjct: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQNC 227
           GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQNC
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQNC 226

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BLAST of MS003478 vs. NCBI nr
Match: XP_022939918.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita moschata])

HSP 1 Score: 438.7 bits (1127), Expect = 3.0e-119
Identity = 219/225 (97.33%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RMLK GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEP+AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TPIEEVYPLVES+NPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL
Sbjct: 121 GTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQN 226
           GPSTIDAAASAGANCIVAGSSVFGAPEPS+VISILRKSVEEAQQN
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSEVISILRKSVEEAQQN 225

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BLAST of MS003478 vs. NCBI nr
Match: XP_022992624.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita maxima] >KAG6578373.1 Ribulose-phosphate 3-epimerase, cytoplasmic isoform, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 438.0 bits (1125), Expect = 5.1e-119
Identity = 219/225 (97.33%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RMLK GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TPIEEVYPLVES+NPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL
Sbjct: 121 GTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQN 226
           GPSTIDAAASAGANCIVAGSSVFGAPEPS+VISILRKSVEEAQQN
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSEVISILRKSVEEAQQN 225

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BLAST of MS003478 vs. NCBI nr
Match: XP_023551616.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 434.5 bits (1116), Expect = 5.6e-118
Identity = 217/225 (96.44%), Postives = 221/225 (98.22%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RML+ GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLRFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TPIEEVYPLVES+NPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL
Sbjct: 121 GTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQN 226
           GPSTIDAAASAGANCIVAGSSVFGAPEPS+VI ILRKSVEEAQQN
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSEVIFILRKSVEEAQQN 225

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BLAST of MS003478 vs. NCBI nr
Match: XP_038884765.1 (ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [Benincasa hispida])

HSP 1 Score: 432.2 bits (1110), Expect = 2.8e-117
Identity = 214/225 (95.11%), Postives = 220/225 (97.78%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RMLK GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDY+EP+AKAGASGFTFHVEVSKDNWQQLI EIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYIEPLAKAGASGFTFHVEVSKDNWQQLIHEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TPIEEVYPLVES+NPVEMVLVMTVEPGFGGQKFMPETMDKVR LRQ+YPSLDIEVDGGL
Sbjct: 121 GTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRNLRQRYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQN 226
           GPSTID AASAGANCIVAGSSVFGAPEPSKVISILRKSVE+AQQN
Sbjct: 181 GPSTIDVAASAGANCIVAGSSVFGAPEPSKVISILRKSVEDAQQN 225

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BLAST of MS003478 vs. ExPASy Swiss-Prot
Match: Q9SE42 (Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japonica OX=39947 GN=Os09g0505700 PE=1 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 2.7e-107
Identity = 187/220 (85.00%), Postives = 209/220 (95.00%), Query Frame = 0


Query: 4   AAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKA 63
           AAKIAPSMLSSDFANLA+EADRM++LGADWLHMDIMDGHFVPNLTIGAPVI+SLRKHTKA
Sbjct: 6   AAKIAPSMLSSDFANLAAEADRMVRLGADWLHMDIMDGHFVPNLTIGAPVIQSLRKHTKA 65

Query: 64  YLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPKTP 123
           YLDCHLMVTNP DYVEP+AKAGASGFTFH+EVS+DNWQ+LIQ IK+KGM+ GV+L+P TP
Sbjct: 66  YLDCHLMVTNPSDYVEPLAKAGASGFTFHIEVSRDNWQELIQSIKAKGMRPGVSLRPGTP 125

Query: 124 IEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGPS 183
           +EEV+PLVE++NPVE+VLVMTVEPGFGGQKFMPE M+KVR LR+KYPSLDIEVDGGLGPS
Sbjct: 126 VEEVFPLVEAENPVELVLVMTVEPGFGGQKFMPEMMEKVRALRKKYPSLDIEVDGGLGPS 185

Query: 184 TIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQ 224
           TID AASAGANCIVAGSS+FGA EP +VIS LRKSVE +Q
Sbjct: 186 TIDVAASAGANCIVAGSSIFGAAEPGEVISALRKSVEGSQ 225

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BLAST of MS003478 vs. ExPASy Swiss-Prot
Match: O14105 (Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) OX=284812 GN=SPAC31G5.05c PE=3 SV=1)

HSP 1 Score: 246.9 bits (629), Expect = 2.2e-64
Identity = 128/225 (56.89%), Postives = 163/225 (72.44%), Query Frame = 0


Query: 3   VAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH-- 62
           V AKIAPS+L+ DFANL  E  RMLK G+DWLH+D+MD  FVPNLTIG  V++++R H  
Sbjct: 2   VQAKIAPSLLAGDFANLEKEVGRMLKYGSDWLHVDVMDAQFVPNLTIGPIVVKAMRNHYT 61

Query: 63  -TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALK 122
             +A+ DCHLMV  P  Y++ +A AGAS F FH E ++ + +++I     KGM  G ALK
Sbjct: 62  KEEAFFDCHLMVIEPERYIDQLADAGASLFCFHYEATEKH-EEIISRAHEKGMLVGCALK 121

Query: 123 PKTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGG 182
           PKTP+E + P VE    ++MVLVMTVEPG GGQ FMPE + KV  LR+KYP+L++EVDGG
Sbjct: 122 PKTPVEVILPFVEK---LDMVLVMTVEPGKGGQSFMPECLPKVEFLRKKYPTLNVEVDGG 181

Query: 183 LGPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQ 225
           L   T+DAAA AGAN IVAG++VF A  P +VIS LR SV +AQ+
Sbjct: 182 LSLKTVDAAADAGANVIVAGTAVFHAQSPEEVISGLRNSVMKAQE 222

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BLAST of MS003478 vs. ExPASy Swiss-Prot
Match: Q96AT9 (Ribulose-phosphate 3-epimerase OS=Homo sapiens OX=9606 GN=RPE PE=1 SV=1)

HSP 1 Score: 233.8 bits (595), Expect = 1.9e-60
Identity = 120/226 (53.10%), Postives = 159/226 (70.35%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           M    KI PS+L+SD ANL +E  RML  GAD+LH+D+MDGHFVPN+T G PV+ESLRK 
Sbjct: 1   MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60

Query: 61  --TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVAL 120
                + D H+MV+ P  +V+PMA AGA+ +TFH+E + +N   LI++I+  GMK G+A+
Sbjct: 61  LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYTFHLEAT-ENPGALIKDIRENGMKVGLAI 120

Query: 121 KPKTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDG 180
           KP T +E + P     N ++M LVMTVEPGFGGQKFM + M KV  LR ++PSLDIEVDG
Sbjct: 121 KPGTSVEYLAPWA---NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDG 180

Query: 181 GLGPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQ 225
           G+GP T+   A AGAN IV+GS++  + +P  VI++LR    EA Q
Sbjct: 181 GVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQ 222

[Close]

BLAST of MS003478 vs. ExPASy Swiss-Prot
Match: Q8VEE0 (Ribulose-phosphate 3-epimerase OS=Mus musculus OX=10090 GN=Rpe PE=1 SV=1)

HSP 1 Score: 232.6 bits (592), Expect = 4.3e-60
Identity = 119/226 (52.65%), Postives = 159/226 (70.35%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           M    KI PS+L+SD ANL +E  RML  GAD+LH+D+MDGHFVPN+T G PV+ESLRK 
Sbjct: 1   MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60

Query: 61  --TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVAL 120
                + D H+MV+ P  +V+PMA AGA+ +TFH+E + +N   LI++I+  GMK G+A+
Sbjct: 61  LGQDPFFDMHMMVSRPEQWVKPMAVAGANQYTFHLEAT-ENPGALIKDIRENGMKVGLAI 120

Query: 121 KPKTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDG 180
           KP T +E + P     N ++M LVMTVEPGFGGQKFM + M KV  LR ++P+LDIEVDG
Sbjct: 121 KPGTTVEYLAPWA---NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPTLDIEVDG 180

Query: 181 GLGPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQ 225
           G+GP T+   A AGAN IV+GS++  + +P  VI++LR    EA Q
Sbjct: 181 GVGPDTVQKCAEAGANMIVSGSAIMRSDDPRAVINLLRNVCSEAAQ 222

[Close]

BLAST of MS003478 vs. ExPASy Swiss-Prot
Match: Q5R5Y2 (Ribulose-phosphate 3-epimerase OS=Pongo abelii OX=9601 GN=RPE PE=2 SV=1)

HSP 1 Score: 231.9 bits (590), Expect = 7.3e-60
Identity = 119/226 (52.65%), Postives = 158/226 (69.91%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           M    KI PS+L+SD ANL +E  RML  GAD+LH+D+MDGHFVPN+T G PV+ESLRK 
Sbjct: 1   MASGCKIGPSILNSDLANLGAECLRMLDSGADYLHLDVMDGHFVPNITFGHPVVESLRKQ 60

Query: 61  --TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVAL 120
                + D H+MV+ P  +V+PMA AGA+ + FH+E + +N   LI++I+  GMK G+A+
Sbjct: 61  LGQDPFFDMHMMVSKPEQWVKPMAVAGANQYAFHLEAT-ENPGALIKDIRENGMKVGLAI 120

Query: 121 KPKTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDG 180
           KP T +E + P     N ++M LVMTVEPGFGGQKFM + M KV  LR ++PSLDIEVDG
Sbjct: 121 KPGTSVEYLAPWA---NQIDMALVMTVEPGFGGQKFMEDMMPKVHWLRTQFPSLDIEVDG 180

Query: 181 GLGPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQ 225
           G+GP T+   A AGAN IV+GS++  + +P  VI++LR    EA Q
Sbjct: 181 GVGPDTVHKCAEAGANMIVSGSAIMRSEDPRSVINLLRNVCSEAAQ 222

[Close]

BLAST of MS003478 vs. ExPASy TrEMBL
Match: A0A6J1BY48 (Ribulose-phosphate 3-epimerase OS=Momordica charantia OX=3673 GN=LOC111006649 PE=3 SV=1)

HSP 1 Score: 452.2 bits (1162), Expect = 1.3e-123
Identity = 226/226 (100.00%), Postives = 226/226 (100.00%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
           KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL
Sbjct: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQNC 227
           GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQNC
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQNC 226

[Close]

BLAST of MS003478 vs. ExPASy TrEMBL
Match: A0A6J1FMW0 (Ribulose-phosphate 3-epimerase OS=Cucurbita moschata OX=3662 GN=LOC111445640 PE=3 SV=1)

HSP 1 Score: 438.7 bits (1127), Expect = 1.4e-119
Identity = 219/225 (97.33%), Postives = 223/225 (99.11%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RMLK GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEP+AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TPIEEVYPLVES+NPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL
Sbjct: 121 GTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQN 226
           GPSTIDAAASAGANCIVAGSSVFGAPEPS+VISILRKSVEEAQQN
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSEVISILRKSVEEAQQN 225

[Close]

BLAST of MS003478 vs. ExPASy TrEMBL
Match: A0A6J1JY19 (Ribulose-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111488913 PE=3 SV=1)

HSP 1 Score: 438.0 bits (1125), Expect = 2.5e-119
Identity = 219/225 (97.33%), Postives = 222/225 (98.67%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RMLK GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEP AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPFAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TPIEEVYPLVES+NPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL
Sbjct: 121 GTPIEEVYPLVESENPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQN 226
           GPSTIDAAASAGANCIVAGSSVFGAPEPS+VISILRKSVEEAQQN
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSEVISILRKSVEEAQQN 225

[Close]

BLAST of MS003478 vs. ExPASy TrEMBL
Match: A0A1S3B391 (Ribulose-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103485491 PE=3 SV=1)

HSP 1 Score: 431.4 bits (1108), Expect = 2.3e-117
Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RMLK GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEP+AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TP+EEVYPLVES+NPVE+VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLDIEVDGGL
Sbjct: 121 GTPVEEVYPLVESENPVELVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQ 225
           GPSTIDAA SAGANCIVAGSSVFGAPEPS+VISILRKSVEEAQQ
Sbjct: 181 GPSTIDAATSAGANCIVAGSSVFGAPEPSEVISILRKSVEEAQQ 224

[Close]

BLAST of MS003478 vs. ExPASy TrEMBL
Match: A0A0A0LMZ3 (Ribulose-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G406760 PE=3 SV=1)

HSP 1 Score: 430.3 bits (1105), Expect = 5.1e-117
Identity = 214/224 (95.54%), Postives = 220/224 (98.21%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           MGVAAKIAPSMLSSDFANLASEA+RMLK GADWLHMDIMDGHFVPNLTIGAPVIESLRKH
Sbjct: 1   MGVAAKIAPSMLSSDFANLASEAERMLKFGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           TKAYLDCHLMVTNPLDYVEP+AKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP
Sbjct: 61  TKAYLDCHLMVTNPLDYVEPLAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TPIEEVYPLVES+NPV++VLVMTVEPGFGGQKFMPETMDKVR LRQKYPSLDIEVDGGL
Sbjct: 121 GTPIEEVYPLVESENPVDLVLVMTVEPGFGGQKFMPETMDKVRNLRQKYPSLDIEVDGGL 180

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQQ 225
           GPSTIDAAASAGANCIVAGSSVFGAPEPS+VISILR SVEEAQQ
Sbjct: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSEVISILRNSVEEAQQ 224

[Close]

BLAST of MS003478 vs. TAIR 10
Match: AT3G01850.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-105
Identity = 184/221 (83.26%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 3   VAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTK 62
           V+ KIAPSMLSSDFANLA+EA+RM+ LGA+WLHMDIMDGHFVPNLTIGAPVIESLRKHT 
Sbjct: 2   VSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTN 61

Query: 63  AYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPKT 122
           AYLDCHLMVTNP+DYV  MAKAGASGFTFHVEV++DNWQQL+++IKS GM+ GVALKP T
Sbjct: 62  AYLDCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGT 121

Query: 123 PIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGP 182
           P+E+VYPLVE   PVEMVLVMTVEPGFGGQKFMP+ MDKVR LRQKYP+LDI+VDGGLGP
Sbjct: 122 PVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALRQKYPTLDIQVDGGLGP 181

Query: 183 STIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQ 224
           STID AA+AGANCIVAGSSVFGAPEP  VIS+LR SVE+AQ
Sbjct: 182 STIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKAQ 222

[Close]

BLAST of MS003478 vs. TAIR 10
Match: AT3G01850.2 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 379.8 bits (974), Expect = 1.5e-105
Identity = 184/221 (83.26%), Postives = 204/221 (92.31%), Query Frame = 0


Query: 3   VAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTK 62
           V+ KIAPSMLSSDFANLA+EA+RM+ LGA+WLHMDIMDGHFVPNLTIGAPVIESLRKHT 
Sbjct: 2   VSPKIAPSMLSSDFANLAAEANRMIDLGANWLHMDIMDGHFVPNLTIGAPVIESLRKHTN 61

Query: 63  AYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKPKT 122
           AYLDCHLMVTNP+DYV  MAKAGASGFTFHVEV++DNWQQL+++IKS GM+ GVALKP T
Sbjct: 62  AYLDCHLMVTNPMDYVAQMAKAGASGFTFHVEVAQDNWQQLVEKIKSTGMRPGVALKPGT 121

Query: 123 PIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGLGP 182
           P+E+VYPLVE   PVEMVLVMTVEPGFGGQKFMP+ MDKVR LRQKYP+LDI+VDGGLGP
Sbjct: 122 PVEQVYPLVEGTTPVEMVLVMTVEPGFGGQKFMPDMMDKVRALRQKYPTLDIQVDGGLGP 181

Query: 183 STIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQ 224
           STID AA+AGANCIVAGSSVFGAPEP  VIS+LR SVE+AQ
Sbjct: 182 STIDTAAAAGANCIVAGSSVFGAPEPGDVISLLRTSVEKAQ 222

[Close]

BLAST of MS003478 vs. TAIR 10
Match: AT1G63290.1 (Aldolase-type TIM barrel family protein )

HSP 1 Score: 376.3 bits (965), Expect = 1.7e-104
Identity = 182/223 (81.61%), Postives = 205/223 (91.93%), Query Frame = 0


Query: 1   MGVAAKIAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKH 60
           +GV+ KIAPSMLSSDFANLA+EA RM+ LGA+WLHMDIMDGHFV NLTIGAPVIESLRKH
Sbjct: 2   VGVSPKIAPSMLSSDFANLAAEAKRMIDLGANWLHMDIMDGHFVSNLTIGAPVIESLRKH 61

Query: 61  TKAYLDCHLMVTNPLDYVEPMAKAGASGFTFHVEVSKDNWQQLIQEIKSKGMKSGVALKP 120
           T AYLDCHLMVTNP+DYV+ MAKAGASGFTFHVEV+++NWQ+L+++IK+ GM+ GVALKP
Sbjct: 62  TNAYLDCHLMVTNPMDYVDQMAKAGASGFTFHVEVAQENWQELVKKIKAAGMRPGVALKP 121

Query: 121 KTPIEEVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLRQKYPSLDIEVDGGL 180
            TP+E+VYPLVE  NPVEMVLVMTVEPGFGGQKFMP  MDKVR LR KYP+LDIEVDGGL
Sbjct: 122 GTPVEQVYPLVEGTNPVEMVLVMTVEPGFGGQKFMPSMMDKVRALRNKYPTLDIEVDGGL 181

Query: 181 GPSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEAQ 224
           GPSTIDAAA+AGANCIVAGSSVFGAP+P  VIS+LR SVE+AQ
Sbjct: 182 GPSTIDAAAAAGANCIVAGSSVFGAPKPGDVISLLRASVEKAQ 224

[Close]

BLAST of MS003478 vs. TAIR 10
Match: AT5G61410.1 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-39
Identity = 89/221 (40.27%), Postives = 133/221 (60.18%), Query Frame = 0


Query: 7   IAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLD 66
           ++PS+LS++FA L  +   +   G DW+H+D+MDG FVPN+TIG  V+++LR  T   LD
Sbjct: 60  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 119

Query: 67  CHLMVTNPLDYVEPMAKAGASGFTFHVE-VSKDNWQQLIQEIKSKGMKSGVALKPKTPIE 126
            HLM+  P   V    KAGA   + H E  S  +  + + +IKS G K+GV L P TP+ 
Sbjct: 120 VHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLS 179

Query: 127 EVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLR----QKYPSLDIEVDGGLG 186
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR    +K  +  IEVDGG+ 
Sbjct: 180 AIEYVLDM---VDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVT 239

Query: 187 PSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEA 223
           P+       AGAN +VAGS+VFGA + ++ I  ++ S   A
Sbjct: 240 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPA 277

[Close]

BLAST of MS003478 vs. TAIR 10
Match: AT5G61410.2 (D-ribulose-5-phosphate-3-epimerase )

HSP 1 Score: 159.8 bits (403), Expect = 2.5e-39
Identity = 89/221 (40.27%), Postives = 133/221 (60.18%), Query Frame = 0


Query: 7   IAPSMLSSDFANLASEADRMLKLGADWLHMDIMDGHFVPNLTIGAPVIESLRKHTKAYLD 66
           ++PS+LS++FA L  +   +   G DW+H+D+MDG FVPN+TIG  V+++LR  T   LD
Sbjct: 60  VSPSILSANFAKLGEQVKAVELAGCDWIHVDVMDGRFVPNITIGPLVVDALRPVTDLPLD 119

Query: 67  CHLMVTNPLDYVEPMAKAGASGFTFHVE-VSKDNWQQLIQEIKSKGMKSGVALKPKTPIE 126
            HLM+  P   V    KAGA   + H E  S  +  + + +IKS G K+GV L P TP+ 
Sbjct: 120 VHLMIVEPEQRVPDFIKAGADIVSVHCEQQSTIHLHRTVNQIKSLGAKAGVVLNPGTPLS 179

Query: 127 EVYPLVESDNPVEMVLVMTVEPGFGGQKFMPETMDKVRKLR----QKYPSLDIEVDGGLG 186
            +  +++    V++VL+M+V PGFGGQ F+   + K+  LR    +K  +  IEVDGG+ 
Sbjct: 180 AIEYVLDM---VDLVLIMSVNPGFGGQSFIESQVKKISDLRKMCAEKGVNPWIEVDGGVT 239

Query: 187 PSTIDAAASAGANCIVAGSSVFGAPEPSKVISILRKSVEEA 223
           P+       AGAN +VAGS+VFGA + ++ I  ++ S   A
Sbjct: 240 PANAYKVIEAGANALVAGSAVFGAKDYAEAIKGIKASKRPA 277

The following BLAST results are available for this feature:

BLAST of MS003478 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134370.1	2.6e-123	100.00	ribulose-phosphate 3-epimerase, cytoplasmic isoform [Momordica charantia]	[more]
XP_022939918.1	3.0e-119	97.33	ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita moschata]	[more]
XP_022992624.1	5.1e-119	97.33	ribulose-phosphate 3-epimerase, cytoplasmic isoform [Cucurbita maxima] >KAG65783...	[more]
XP_023551616.1	5.6e-118	96.44	ribulose-phosphate 3-epimerase, cytoplasmic isoform-like [Cucurbita pepo subsp. ...	[more]
XP_038884765.1	2.8e-117	95.11	ribulose-phosphate 3-epimerase, cytoplasmic isoform isoform X1 [Benincasa hispid...	[more]

BLAST of MS003478 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SE42	2.7e-107	85.00	Ribulose-phosphate 3-epimerase, cytoplasmic isoform OS=Oryza sativa subsp. japon...	[more]
O14105	2.2e-64	56.89	Ribulose-phosphate 3-epimerase OS=Schizosaccharomyces pombe (strain 972 / ATCC 2...	[more]
Q96AT9	1.9e-60	53.10	Ribulose-phosphate 3-epimerase OS=Homo sapiens OX=9606 GN=RPE PE=1 SV=1	[more]
Q8VEE0	4.3e-60	52.65	Ribulose-phosphate 3-epimerase OS=Mus musculus OX=10090 GN=Rpe PE=1 SV=1	[more]
Q5R5Y2	7.3e-60	52.65	Ribulose-phosphate 3-epimerase OS=Pongo abelii OX=9601 GN=RPE PE=2 SV=1	[more]

BLAST of MS003478 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BY48	1.3e-123	100.00	Ribulose-phosphate 3-epimerase OS=Momordica charantia OX=3673 GN=LOC111006649 PE...	[more]
A0A6J1FMW0	1.4e-119	97.33	Ribulose-phosphate 3-epimerase OS=Cucurbita moschata OX=3662 GN=LOC111445640 PE=...	[more]
A0A6J1JY19	2.5e-119	97.33	Ribulose-phosphate 3-epimerase OS=Cucurbita maxima OX=3661 GN=LOC111488913 PE=3 ...	[more]
A0A1S3B391	2.3e-117	95.54	Ribulose-phosphate 3-epimerase OS=Cucumis melo OX=3656 GN=LOC103485491 PE=3 SV=1	[more]
A0A0A0LMZ3	5.1e-117	95.54	Ribulose-phosphate 3-epimerase OS=Cucumis sativus OX=3659 GN=Csa_2G406760 PE=3 S...	[more]

BLAST of MS003478 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G01850.1	1.5e-105	83.26	Aldolase-type TIM barrel family protein	[more]
AT3G01850.2	1.5e-105	83.26	Aldolase-type TIM barrel family protein	[more]
AT1G63290.1	1.7e-104	81.61	Aldolase-type TIM barrel family protein	[more]
AT5G61410.1	2.5e-39	40.27	D-ribulose-5-phosphate-3-epimerase	[more]
AT5G61410.2	2.5e-39	40.27	D-ribulose-5-phosphate-3-epimerase	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000056	Ribulose-phosphate 3-epimerase-like	PFAM	PF00834	Ribul_P_3_epim	coord: 6..203 e-value: 1.8E-72 score: 242.9
IPR000056	Ribulose-phosphate 3-epimerase-like	PANTHER	PTHR11749	RIBULOSE-5-PHOSPHATE-3-EPIMERASE	coord: 1..225
IPR000056	Ribulose-phosphate 3-epimerase-like	PROSITE	PS01085	RIBUL_P_3_EPIMER_1	coord: 34..48
IPR000056	Ribulose-phosphate 3-epimerase-like	PROSITE	PS01086	RIBUL_P_3_EPIMER_2	coord: 140..162
IPR000056	Ribulose-phosphate 3-epimerase-like	CDD	cd00429	RPE	coord: 6..216 e-value: 1.1046E-121 score: 342.152
IPR013785	Aldolase-type TIM barrel	GENE3D	3.20.20.70	Aldolase class I	coord: 2..226 e-value: 2.4E-100 score: 336.2
IPR026019	Ribulose-phosphate 3-epimerase	PIRSF	PIRSF001461	RPE	coord: 1..226 e-value: 1.8E-85 score: 283.6
IPR026019	Ribulose-phosphate 3-epimerase	TIGRFAM	TIGR01163	TIGR01163	coord: 6..216 e-value: 2.8E-72 score: 240.5
IPR026019	Ribulose-phosphate 3-epimerase	HAMAP	MF_02227	RPE	coord: 4..218 score: 51.789021
None	No IPR available	PIRSR	PIRSR001461-2	PIRSR001461-2	coord: 6..222 e-value: 3.2E-80 score: 266.1
None	No IPR available	PIRSR	PIRSR001461-3	PIRSR001461-3	coord: 6..222 e-value: 3.5E-81 score: 269.3
None	No IPR available	PIRSR	PIRSR001461-1	PIRSR001461-1	coord: 6..222 e-value: 3.5E-81 score: 269.3
None	No IPR available	PANTHER	PTHR11749:SF3	RIBULOSE-PHOSPHATE 3-EPIMERASE	coord: 1..225
IPR011060	Ribulose-phosphate binding barrel	SUPERFAMILY	51366	Ribulose-phoshate binding barrel	coord: 5..221

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003478.1	MS003478.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0005975	carbohydrate metabolic process
biological_process	GO:0006098	pentose-phosphate shunt
molecular_function	GO:0003824	catalytic activity
molecular_function	GO:0016857	racemase and epimerase activity, acting on carbohydrates and derivatives
molecular_function	GO:0004750	ribulose-phosphate 3-epimerase activity