
MS003456 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCGATACAGTAGATTTGACGGGGAATGGAGGTGTTGTGAAGACAATTGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACAGATGACCTTCCTCTTGTTGATGGTACTTTTTCTTAGCAAAACTATGGTTTCTTTTCTCACTGACAATGCGTTACTTAGTACTGAGACTAATAGTATATGAGTAAAATTCAAGAGGAAGATTTGGACAAGGTACCTTCGAGCTTCAGTTTGTTAGTGTTTTTGGCTGCTTATTGAGTAGTCAGTGGATAGATAGAAGCTTCCCTTTTGTTATTAACTTAATTTGTGGCAGATACGGATGTGCTATTGATCTAAAGGATTGTGTACCCACCTTTATGAATTCCTACTGTCTATGTCTGATGACCTGACTGTTTAATTATAATTTCATTCAGAATACTGCTTTTTGATGATTGAAGTTCCCATGAGCTAGAATATACAATTGATTAACCCGGTTCCCCGTCATTTAATAGATCTTCCCTGCACCGCATTCTGGCCTCTTCAAACTTGTATTTGTATTAGAACCTTCCTTGTTGATAAAATTTTAAAGCTTGCTTATTCAAAAGTTTCGTTAATTCTTGCCATATGTTGGCGGTTGAGCAGTACATTATGAAGGAACTCTAGCGGAATCTGGGGAAGTATTTGATTCAACTCGTGAAGATAATACTGTCTTCTCTTTTGAGCTTGGAAAAGGATCCGTTATCCAGGCTTGGGAAATTGCTGTGAAGACGATGAAGGTAAAGAAAAAACATGCTTTCCATCAGGAATATCTGGTGCATTTTTCTTTTTGAGTGATGTTCTGTATTGTTCCAACAGGTGGGAGAGGTTGCAAAAATCACTTGCAAACCAGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGATATCCCACCAGAGTAATGTCCTTTCTCTTTCTTCTTCCACTTTTTAAGTATCAAGGTGGCTATCTTGCTGGAAAATTTGCTCATGAAGTATGCTGGCCACTACAATTGCAATGAATTCCTCAATTAAAATGGCTGTTTATTGTCTCGTACGTGCTCCTCTATTTTATGCAGTGCAACGCTTGTTTTCGAGGTGGAATTAGTGGCCTGCAAGCCCCGGAAAGGCTCAAGTCTGGGCAGTGTTTCTGAGGAAAGGGCCAGGCTCGAGTAAGTAATCTACTACTTCAACGATCCACTTTTCTCAAACATTGTTAATGATAATGATCTCTTTCTTACATCAACATTGGTGCATCAGAGAATTGAAAAGACAAAGGGAGGCTGCTGCTGCCGTAAAAGAGGAAGAGAAAAGAAAGAGAGACGAGGCGAAAGCAGCTGCAGCTGCCCGAATTCAAGCCAAGCTAGAGTCTAAGAAGGGCCAGGGAAAGGGGAAGAACAAAGCCAAA ATGGGCGATACAGTAGATTTGACGGGGAATGGAGGTGTTGTGAAGACAATTGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACAGATGACCTTCCTCTTGTTGATGCAGTACATTATGAAGGAACTCTAGCGGAATCTGGGGAAGTATTTGATTCAACTCGTGAAGATAATACTGTCTTCTCTTTTGAGCTTGGAAAAGGATCCGTTATCCAGGCTTGGGAAATTGCTGTGAAGACGATGAAGGTGGGAGAGGTTGCAAAAATCACTTGCAAACCAGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGATATCCCACCAGATGCAACGCTTGTTTTCGAGGTGGAATTAGTGGCCTGCAAGCCCCGGAAAGGCTCAAGTCTGGGCAGTGTTTCTGAGGAAAGGGCCAGGCTCGAAGAATTGAAAAGACAAAGGGAGGCTGCTGCTGCCGTAAAAGAGGAAGAGAAAAGAAAGAGAGACGAGGCGAAAGCAGCTGCAGCTGCCCGAATTCAAGCCAAGCTAGAGTCTAAGAAGGGCCAGGGAAAGGGGAAGAACAAAGCCAAA ATGGGCGATACAGTAGATTTGACGGGGAATGGAGGTGTTGTGAAGACAATTGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACAGATGACCTTCCTCTTGTTGATGCAGTACATTATGAAGGAACTCTAGCGGAATCTGGGGAAGTATTTGATTCAACTCGTGAAGATAATACTGTCTTCTCTTTTGAGCTTGGAAAAGGATCCGTTATCCAGGCTTGGGAAATTGCTGTGAAGACGATGAAGGTGGGAGAGGTTGCAAAAATCACTTGCAAACCAGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGATATCCCACCAGATGCAACGCTTGTTTTCGAGGTGGAATTAGTGGCCTGCAAGCCCCGGAAAGGCTCAAGTCTGGGCAGTGTTTCTGAGGAAAGGGCCAGGCTCGAAGAATTGAAAAGACAAAGGGAGGCTGCTGCTGCCGTAAAAGAGGAAGAGAAAAGAAAGAGAGACGAGGCGAAAGCAGCTGCAGCTGCCCGAATTCAAGCCAAGCTAGAGTCTAAGAAGGGCCAGGGAAAGGGGAAGAACAAAGCCAAA MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTVFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKGQGKGKNKAK Homology
BLAST of MS003456 vs. NCBI nr
Match: XP_022133782.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133783.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133784.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133785.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia]) HSP 1 Score: 344.4 bits (882), Expect = 6.4e-91 Identity = 187/189 (98.94%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of MS003456 vs. NCBI nr
Match: XP_038885376.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Benincasa hispida] >XP_038885377.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Benincasa hispida]) HSP 1 Score: 331.6 bits (849), Expect = 4.3e-87 Identity = 180/189 (95.24%), Postives = 185/189 (97.88%), Query Frame = 0
BLAST of MS003456 vs. NCBI nr
Match: XP_022938681.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata] >XP_022938682.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata]) HSP 1 Score: 327.4 bits (838), Expect = 8.1e-86 Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of MS003456 vs. NCBI nr
Match: XP_023551050.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita pepo subsp. pepo] >KAG7015975.1 Peptidyl-prolyl cis-trans isomerase FKBP20-1, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85 Identity = 176/189 (93.12%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of MS003456 vs. NCBI nr
Match: XP_022992626.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima] >XP_022992627.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima]) HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85 Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: Q9M2S7 (Peptidyl-prolyl cis-trans isomerase FKBP20-1 OS=Arabidopsis thaliana OX=3702 GN=FKBP20-1 PE=1 SV=1) HSP 1 Score: 278.9 bits (712), Expect = 4.3e-74 Identity = 146/189 (77.25%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: Q9QVC8 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3) HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26 Identity = 66/111 (59.46%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: Q02790 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens OX=9606 GN=FKBP4 PE=1 SV=3) HSP 1 Score: 118.2 bits (295), Expect = 9.8e-26 Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 0
BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: P27124 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Oryctolagus cuniculus OX=9986 GN=FKBP4 PE=1 SV=3) HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25 Identity = 64/111 (57.66%), Postives = 74/111 (66.67%), Query Frame = 0
BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: P30416 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5) HSP 1 Score: 116.7 bits (291), Expect = 2.9e-25 Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 0
BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A6J1BWZ8 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111006266 PE=4 SV=1) HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91 Identity = 187/189 (98.94%), Postives = 187/189 (98.94%), Query Frame = 0
BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A6J1FDU4 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111444833 PE=4 SV=1) HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86 Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A6J1JQE3 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111488915 PE=4 SV=1) HSP 1 Score: 327.0 bits (837), Expect = 5.1e-86 Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A5A7UL42 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001310 PE=4 SV=1) HSP 1 Score: 326.6 bits (836), Expect = 6.7e-86 Identity = 174/189 (92.06%), Postives = 184/189 (97.35%), Query Frame = 0
BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A0A0KD69 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G008620 PE=4 SV=1) HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85 Identity = 176/189 (93.12%), Postives = 183/189 (96.83%), Query Frame = 0
BLAST of MS003456 vs. TAIR 10
Match: AT3G55520.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 278.9 bits (712), Expect = 3.1e-75 Identity = 146/189 (77.25%), Postives = 172/189 (91.01%), Query Frame = 0
BLAST of MS003456 vs. TAIR 10
Match: AT5G48570.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein ) HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21 Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 0
BLAST of MS003456 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 ) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15 Identity = 59/146 (40.41%), Postives = 80/146 (54.79%), Query Frame = 0
BLAST of MS003456 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 ) HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15 Identity = 59/146 (40.41%), Postives = 80/146 (54.79%), Query Frame = 0
BLAST of MS003456 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 ) HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14 Identity = 42/100 (42.00%), Postives = 55/100 (55.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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