MS003456 (gene) Bitter gourd (TR) v1

Overview


Name	MS003456
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Peptidylprolyl isomerase
Location	scaffold234: 2924961 .. 2926365 (-)
RNA-Seq Expression	MS003456
Synteny	MS003456

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGCGATACAGTAGATTTGACGGGGAATGGAGGTGTTGTGAAGACAATTGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACAGATGACCTTCCTCTTGTTGATGGTACTTTTTCTTAGCAAAACTATGGTTTCTTTTCTCACTGACAATGCGTTACTTAGTACTGAGACTAATAGTATATGAGTAAAATTCAAGAGGAAGATTTGGACAAGGTACCTTCGAGCTTCAGTTTGTTAGTGTTTTTGGCTGCTTATTGAGTAGTCAGTGGATAGATAGAAGCTTCCCTTTTGTTATTAACTTAATTTGTGGCAGATACGGATGTGCTATTGATCTAAAGGATTGTGTACCCACCTTTATGAATTCCTACTGTCTATGTCTGATGACCTGACTGTTTAATTATAATTTCATTCAGAATACTGCTTTTTGATGATTGAAGTTCCCATGAGCTAGAATATACAATTGATTAACCCGGTTCCCCGTCATTTAATAGATCTTCCCTGCACCGCATTCTGGCCTCTTCAAACTTGTATTTGTATTAGAACCTTCCTTGTTGATAAAATTTTAAAGCTTGCTTATTCAAAAGTTTCGTTAATTCTTGCCATATGTTGGCGGTTGAGCAGTACATTATGAAGGAACTCTAGCGGAATCTGGGGAAGTATTTGATTCAACTCGTGAAGATAATACTGTCTTCTCTTTTGAGCTTGGAAAAGGATCCGTTATCCAGGCTTGGGAAATTGCTGTGAAGACGATGAAGGTAAAGAAAAAACATGCTTTCCATCAGGAATATCTGGTGCATTTTTCTTTTTGAGTGATGTTCTGTATTGTTCCAACAGGTGGGAGAGGTTGCAAAAATCACTTGCAAACCAGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGATATCCCACCAGAGTAATGTCCTTTCTCTTTCTTCTTCCACTTTTTAAGTATCAAGGTGGCTATCTTGCTGGAAAATTTGCTCATGAAGTATGCTGGCCACTACAATTGCAATGAATTCCTCAATTAAAATGGCTGTTTATTGTCTCGTACGTGCTCCTCTATTTTATGCAGTGCAACGCTTGTTTTCGAGGTGGAATTAGTGGCCTGCAAGCCCCGGAAAGGCTCAAGTCTGGGCAGTGTTTCTGAGGAAAGGGCCAGGCTCGAGTAAGTAATCTACTACTTCAACGATCCACTTTTCTCAAACATTGTTAATGATAATGATCTCTTTCTTACATCAACATTGGTGCATCAGAGAATTGAAAAGACAAAGGGAGGCTGCTGCTGCCGTAAAAGAGGAAGAGAAAAGAAAGAGAGACGAGGCGAAAGCAGCTGCAGCTGCCCGAATTCAAGCCAAGCTAGAGTCTAAGAAGGGCCAGGGAAAGGGGAAGAACAAAGCCAAA

mRNA sequence

ATGGGCGATACAGTAGATTTGACGGGGAATGGAGGTGTTGTGAAGACAATTGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACAGATGACCTTCCTCTTGTTGATGCAGTACATTATGAAGGAACTCTAGCGGAATCTGGGGAAGTATTTGATTCAACTCGTGAAGATAATACTGTCTTCTCTTTTGAGCTTGGAAAAGGATCCGTTATCCAGGCTTGGGAAATTGCTGTGAAGACGATGAAGGTGGGAGAGGTTGCAAAAATCACTTGCAAACCAGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGATATCCCACCAGATGCAACGCTTGTTTTCGAGGTGGAATTAGTGGCCTGCAAGCCCCGGAAAGGCTCAAGTCTGGGCAGTGTTTCTGAGGAAAGGGCCAGGCTCGAAGAATTGAAAAGACAAAGGGAGGCTGCTGCTGCCGTAAAAGAGGAAGAGAAAAGAAAGAGAGACGAGGCGAAAGCAGCTGCAGCTGCCCGAATTCAAGCCAAGCTAGAGTCTAAGAAGGGCCAGGGAAAGGGGAAGAACAAAGCCAAA

Coding sequence (CDS)

ATGGGCGATACAGTAGATTTGACGGGGAATGGAGGTGTTGTGAAGACAATTGTAAGGCATGCCAAAGCCAATGCTGATGCTCCAACAGATGACCTTCCTCTTGTTGATGCAGTACATTATGAAGGAACTCTAGCGGAATCTGGGGAAGTATTTGATTCAACTCGTGAAGATAATACTGTCTTCTCTTTTGAGCTTGGAAAAGGATCCGTTATCCAGGCTTGGGAAATTGCTGTGAAGACGATGAAGGTGGGAGAGGTTGCAAAAATCACTTGCAAACCAGAATATGCTTATGGAAGTGCTGGTTCTCCACCAGATATCCCACCAGATGCAACGCTTGTTTTCGAGGTGGAATTAGTGGCCTGCAAGCCCCGGAAAGGCTCAAGTCTGGGCAGTGTTTCTGAGGAAAGGGCCAGGCTCGAAGAATTGAAAAGACAAAGGGAGGCTGCTGCTGCCGTAAAAGAGGAAGAGAAAAGAAAGAGAGACGAGGCGAAAGCAGCTGCAGCTGCCCGAATTCAAGCCAAGCTAGAGTCTAAGAAGGGCCAGGGAAAGGGGAAGAACAAAGCCAAA

Protein sequence

MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTVFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKGQGKGKNKAK

Homology

[Close]

BLAST of MS003456 vs. NCBI nr
Match: XP_022133782.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133783.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133784.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133785.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia])

HSP 1 Score: 344.4 bits (882), Expect = 6.4e-91
Identity = 187/189 (98.94%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD VHYEGTLAESGEVFDST EDNTV
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD-VHYEGTLAESGEVFDSTLEDNTV 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180

Query: 181 QGKGKNKAK 190
           QGKGKNKAK
Sbjct: 181 QGKGKNKAK 188

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BLAST of MS003456 vs. NCBI nr
Match: XP_038885376.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Benincasa hispida] >XP_038885377.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Benincasa hispida])

HSP 1 Score: 331.6 bits (849), Expect = 4.3e-87
Identity = 180/189 (95.24%), Postives = 185/189 (97.88%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           M DT+DLTGNGGVVKTIVRHAKANA+APTDDLPLVD VHYEGTLAESGEVFDSTREDNTV
Sbjct: 1   MSDTIDLTGNGGVVKTIVRHAKANANAPTDDLPLVD-VHYEGTLAESGEVFDSTREDNTV 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAARIQAKLESKKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAALKEEEKKKRDEAKAAAAARIQAKLESKKG 180

Query: 181 QGKGKNKAK 190
            GKGKNKAK
Sbjct: 181 -GKGKNKAK 187

[Close]

BLAST of MS003456 vs. NCBI nr
Match: XP_022938681.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata] >XP_022938682.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata])

HSP 1 Score: 327.4 bits (838), Expect = 8.1e-86
Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD V YEG LAESGEVFDSTREDNT+
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD-VQYEGVLAESGEVFDSTREDNTI 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPP+ATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAARIQAKL++KKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAAIKEEEKKKRDEAKAAAAARIQAKLDAKKG 180

Query: 181 QGKGKNKAK 190
            GKGKNKAK
Sbjct: 181 -GKGKNKAK 187

[Close]

BLAST of MS003456 vs. NCBI nr
Match: XP_023551050.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita pepo subsp. pepo] >KAG7015975.1 Peptidyl-prolyl cis-trans isomerase FKBP20-1, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 176/189 (93.12%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDT+DLTGNGGVVKTIVRHAKANADAPTDDLPLVD V YEG LAESGEVFDSTREDNT+
Sbjct: 1   MGDTIDLTGNGGVVKTIVRHAKANADAPTDDLPLVD-VQYEGVLAESGEVFDSTREDNTI 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPP+ATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAARIQAKL++KKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAAIKEEEKKKRDEAKAAAAARIQAKLDAKKG 180

Query: 181 QGKGKNKAK 190
            GKGKNKAK
Sbjct: 181 -GKGKNKAK 187

[Close]

BLAST of MS003456 vs. NCBI nr
Match: XP_022992626.1 (peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima] >XP_022992627.1 peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima])

HSP 1 Score: 327.0 bits (837), Expect = 1.1e-85
Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD VHYEG LAESGEVFDSTREDNT+
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD-VHYEGVLAESGEVFDSTREDNTI 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPP+ATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAARIQAKL++KK 
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAAIKEEEKKKRDEAKAAAAARIQAKLDAKK- 180

Query: 181 QGKGKNKAK 190
            GKGKNKAK
Sbjct: 181 CGKGKNKAK 187

[Close]

BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: Q9M2S7 (Peptidyl-prolyl cis-trans isomerase FKBP20-1 OS=Arabidopsis thaliana OX=3702 GN=FKBP20-1 PE=1 SV=1)

HSP 1 Score: 278.9 bits (712), Expect = 4.3e-74
Identity = 146/189 (77.25%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGD +DL+G+GGV+K IVR AK +A +P+DDLP+VD VHYEG LAE  +VFD+TREDN V
Sbjct: 1   MGDAIDLSGDGGVLKKIVRSAKPDAISPSDDLPVVD-VHYEGILAEDEKVFDTTREDNLV 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELG GSVI++W+IA+KTMKVGEVAKITCKPEYAYG AGSPPDIPPDATL+FEVELVA
Sbjct: 61  FSFELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPPDIPPDATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           C+PRKG+S+GSVSEERARLE+LK+QRE AAA KE++K+KR+EAKAAAAARIQAKL++KKG
Sbjct: 121 CRPRKGASVGSVSEERARLEDLKKQREIAAAAKEDDKKKREEAKAAAAARIQAKLDAKKG 180

Query: 181 QGKGKNKAK 190
            GKGK K K
Sbjct: 181 PGKGKGKGK 188

[Close]

BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: Q9QVC8 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4 PE=1 SV=3)

HSP 1 Score: 119.8 bits (299), Expect = 3.4e-26
Identity = 66/111 (59.46%), Postives = 74/111 (66.67%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTVFSFELGKGSVI 71
           GV+K I R       A   D      VHY G L + G  FDS+ +    FSF+LGKG VI
Sbjct: 32  GVLKVIKREGTGTETAMIGDRVF---VHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVI 91

Query: 72  QAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACK 123
           +AW+IAV TMKVGEV  ITCKPEYAYGSAGSPP IPP+ATLVFEVEL   K
Sbjct: 92  KAWDIAVATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: Q02790 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens OX=9606 GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 118.2 bits (295), Expect = 9.8e-26
Identity = 64/114 (56.14%), Postives = 77/114 (67.54%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVD---AVHYEGTLAESGEVFDSTREDNTVFSFELGKG 71
           GV+K I R           ++P++     VHY G L + G  FDS+ +    FSF+LGKG
Sbjct: 32  GVLKVIKREGTGT------EMPMIGDRVFVHYTGWLLD-GTKFDSSLDRKDKFSFDLGKG 91

Query: 72  SVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACK 123
            VI+AW+IA+ TMKVGEV  ITCKPEYAYGSAGSPP IPP+ATLVFEVEL   K
Sbjct: 92  EVIKAWDIAIATMKVGEVCHITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: P27124 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Oryctolagus cuniculus OX=9986 GN=FKBP4 PE=1 SV=3)

HSP 1 Score: 117.9 bits (294), Expect = 1.3e-25
Identity = 64/111 (57.66%), Postives = 74/111 (66.67%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTVFSFELGKGSVI 71
           GV+K I R           D      VHY G L + G  FDS+ +    FSF+LGKG VI
Sbjct: 32  GVLKVIKREGTGTETPMIGDRVF---VHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVI 91

Query: 72  QAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACK 123
           +AW+IAV TMKVGE+ +ITCKPEYAYGSAGSPP IPP+ATLVFEVEL   K
Sbjct: 92  KAWDIAVATMKVGELCRITCKPEYAYGSAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of MS003456 vs. ExPASy Swiss-Prot
Match: P30416 (Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1 SV=5)

HSP 1 Score: 116.7 bits (291), Expect = 2.9e-25
Identity = 64/111 (57.66%), Postives = 73/111 (65.77%), Query Frame = 0


Query: 12  GVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTVFSFELGKGSVI 71
           GV+K I R           D      VHY G L + G  FDS+ +    FSF+LGKG VI
Sbjct: 32  GVLKVIKREGTGTETPMIGDRVF---VHYTGWLLD-GTKFDSSLDRKDKFSFDLGKGEVI 91

Query: 72  QAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVACK 123
           +AW+IAV TMKVGEV  ITCKPEYAYG+AGSPP IPP+ATLVFEVEL   K
Sbjct: 92  KAWDIAVATMKVGEVCHITCKPEYAYGAAGSPPKIPPNATLVFEVELFEFK 138

[Close]

BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A6J1BWZ8 (Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111006266 PE=4 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 3.1e-91
Identity = 187/189 (98.94%), Postives = 187/189 (98.94%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD VHYEGTLAESGEVFDST EDNTV
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD-VHYEGTLAESGEVFDSTLEDNTV 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180

Query: 181 QGKGKNKAK 190
           QGKGKNKAK
Sbjct: 181 QGKGKNKAK 188

[Close]

BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A6J1FDU4 (Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111444833 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 3.9e-86
Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD V YEG LAESGEVFDSTREDNT+
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD-VQYEGVLAESGEVFDSTREDNTI 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPP+ATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAARIQAKL++KKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAAIKEEEKKKRDEAKAAAAARIQAKLDAKKG 180

Query: 181 QGKGKNKAK 190
            GKGKNKAK
Sbjct: 181 -GKGKNKAK 187

[Close]

BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A6J1JQE3 (Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111488915 PE=4 SV=1)

HSP 1 Score: 327.0 bits (837), Expect = 5.1e-86
Identity = 177/189 (93.65%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD VHYEG LAESGEVFDSTREDNT+
Sbjct: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVD-VHYEGVLAESGEVFDSTREDNTI 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPP+ATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPNATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAARIQAKL++KK 
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAAIKEEEKKKRDEAKAAAAARIQAKLDAKK- 180

Query: 181 QGKGKNKAK 190
            GKGKNKAK
Sbjct: 181 CGKGKNKAK 187

[Close]

BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A5A7UL42 (Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold288G001310 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 6.7e-86
Identity = 174/189 (92.06%), Postives = 184/189 (97.35%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGDT+DLTGNGGV+KTIV+HAKA+AD PTDDLPLVDAVHYEGTLAESG VFDSTREDNTV
Sbjct: 1   MGDTIDLTGNGGVLKTIVKHAKADADGPTDDLPLVDAVHYEGTLAESGVVFDSTREDNTV 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYG AGSPPDIPP+ATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGVAGSPPDIPPEATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAAR+QAKLESKKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAALKEEEKKKRDEAKAAAAARMQAKLESKKG 180

Query: 181 QGKGKNKAK 190
            GKGK+KAK
Sbjct: 181 -GKGKSKAK 188

[Close]

BLAST of MS003456 vs. ExPASy TrEMBL
Match: A0A0A0KD69 (Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G008620 PE=4 SV=1)

HSP 1 Score: 325.1 bits (832), Expect = 1.9e-85
Identity = 176/189 (93.12%), Postives = 183/189 (96.83%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           M +T+DLTGNGGV+KTIV+HAKANADAPTDDLPLVD VHYEGTLAESGEVFDSTREDNTV
Sbjct: 1   MSETIDLTGNGGVLKTIVKHAKANADAPTDDLPLVD-VHYEGTLAESGEVFDSTREDNTV 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYG AGSPPDIPPDATL+FEVELVA
Sbjct: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGVAGSPPDIPPDATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           CKPRKGSSLGSVSEERARLEELKRQREA AA+KEEEK+KRDEAKAAAAARIQAKLESKKG
Sbjct: 121 CKPRKGSSLGSVSEERARLEELKRQREATAALKEEEKKKRDEAKAAAAARIQAKLESKKG 180

Query: 181 QGKGKNKAK 190
            GKGK KAK
Sbjct: 181 -GKGKGKAK 187

[Close]

BLAST of MS003456 vs. TAIR 10
Match: AT3G55520.1 (FKBP-like peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 278.9 bits (712), Expect = 3.1e-75
Identity = 146/189 (77.25%), Postives = 172/189 (91.01%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           MGD +DL+G+GGV+K IVR AK +A +P+DDLP+VD VHYEG LAE  +VFD+TREDN V
Sbjct: 1   MGDAIDLSGDGGVLKKIVRSAKPDAISPSDDLPVVD-VHYEGILAEDEKVFDTTREDNLV 60

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           FSFELG GSVI++W+IA+KTMKVGEVAKITCKPEYAYG AGSPPDIPPDATL+FEVELVA
Sbjct: 61  FSFELGTGSVIRSWDIALKTMKVGEVAKITCKPEYAYGRAGSPPDIPPDATLIFEVELVA 120

Query: 121 CKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEKRKRDEAKAAAAARIQAKLESKKG 180
           C+PRKG+S+GSVSEERARLE+LK+QRE AAA KE++K+KR+EAKAAAAARIQAKL++KKG
Sbjct: 121 CRPRKGASVGSVSEERARLEDLKKQREIAAAAKEDDKKKREEAKAAAAARIQAKLDAKKG 180

Query: 181 QGKGKNKAK 190
            GKGK K K
Sbjct: 181 PGKGKGKGK 188

[Close]

BLAST of MS003456 vs. TAIR 10
Match: AT5G48570.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein )

HSP 1 Score: 100.1 bits (248), Expect = 2.0e-21
Identity = 56/125 (44.80%), Postives = 79/125 (63.20%), Query Frame = 0


Query: 1   MGDTVDLTGNGGVVKTIVRHAKANADAPTDDLPLVDAVHYEGTLAESGEVFDSTREDNTV 60
           +G+ +++ G  G+ K +V+  +   D P +   +   VHY GTL + G  FDS+R+  T 
Sbjct: 37  IGEEMEI-GKSGLKKKLVKECE-KWDTPENGDEV--EVHYTGTLLD-GTKFDSSRDRGTP 96

Query: 61  FSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAYGSAGSPPDIPPDATLVFEVELVA 120
           F F LG+G VI+ W++ +KTMK GE A  T  PE AYG  GSPP IPP+ATL F+VEL+A
Sbjct: 97  FKFTLGQGHVIKGWDLGIKTMKKGENAIFTIPPELAYGETGSPPTIPPNATLQFDVELIA 156

Query: 121 CKPRK 126
            +  K
Sbjct: 157 WRSVK 156

[Close]

BLAST of MS003456 vs. TAIR 10
Match: AT3G25230.1 (rotamase FKBP 1 )

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 59/146 (40.41%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 38  VHYEGTLAESGEVFDSTREDNTVFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAY 97
           VHY GTL + G  FDS+R+  T F F LG+G VI+ W+I +KTMK GE A  T   E AY
Sbjct: 62  VHYTGTLLD-GTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAY 121

Query: 98  GSAGSPPDIPPDATLVFEVELVACKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEK 157
           G +GSPP IP +ATL F+VEL+     K  S+  + ++    +++      A   K E  
Sbjct: 122 GESGSPPTIPANATLQFDVELL-----KWDSVKDICKDGGVFKKI-----LAVGEKWENP 181

Query: 158 RKRDEAKAAAAARIQAKLESKKGQGK 184
           +  DE       + +AKLE     GK
Sbjct: 182 KDLDE----VLVKFEAKLEDGTVVGK 192

[Close]

BLAST of MS003456 vs. TAIR 10
Match: AT3G25230.2 (rotamase FKBP 1 )

HSP 1 Score: 80.9 bits (198), Expect = 1.2e-15
Identity = 59/146 (40.41%), Postives = 80/146 (54.79%), Query Frame = 0


Query: 38  VHYEGTLAESGEVFDSTREDNTVFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAY 97
           VHY GTL + G  FDS+R+  T F F LG+G VI+ W+I +KTMK GE A  T   E AY
Sbjct: 62  VHYTGTLLD-GTKFDSSRDRATPFKFTLGQGQVIKGWDIGIKTMKKGENAVFTIPAELAY 121

Query: 98  GSAGSPPDIPPDATLVFEVELVACKPRKGSSLGSVSEERARLEELKRQREAAAAVKEEEK 157
           G +GSPP IP +ATL F+VEL+     K  S+  + ++    +++      A   K E  
Sbjct: 122 GESGSPPTIPANATLQFDVELL-----KWDSVKDICKDGGVFKKI-----LAVGEKWENP 181

Query: 158 RKRDEAKAAAAARIQAKLESKKGQGK 184
           +  DE       + +AKLE     GK
Sbjct: 182 KDLDE----VLVKFEAKLEDGTVVGK 192

[Close]

BLAST of MS003456 vs. TAIR 10
Match: AT5G48580.1 (FK506- and rapamycin-binding protein 15 kD-2 )

HSP 1 Score: 76.6 bits (187), Expect = 2.3e-14
Identity = 42/100 (42.00%), Postives = 55/100 (55.00%), Query Frame = 0


Query: 38  VHYEGTLAESGEVFDSTREDNTVFSFELGKGSVIQAWEIAVKTMKVGEVAKITCKPEYAY 97
           VHY G L + G VFDS+ E    F F+LG G VI+ W+  +    VGE  K+    +  Y
Sbjct: 57  VHYRGKLTD-GTVFDSSFERGDPFEFKLGSGQVIKGWDQGLLGACVGEKRKLKIPAKLGY 116

Query: 98  GSAGSPPDIPPDATLVFEVELVAC--KPRKGSSLGSVSEE 136
           G  GSPP IP  ATL+F+ EL+A   KP  G   G   ++
Sbjct: 117 GEQGSPPTIPGGATLIFDTELIAVNEKPAGGEEYGGDEDD 155

The following BLAST results are available for this feature:

BLAST of MS003456 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133782.1	6.4e-91	98.94	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Momordica charantia] >XP_022133783...	[more]
XP_038885376.1	4.3e-87	95.24	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Benincasa hispida] >XP_038885377.1...	[more]
XP_022938681.1	8.1e-86	93.65	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita moschata] >XP_022938682....	[more]
XP_023551050.1	1.1e-85	93.12	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita pepo subsp. pepo] >KAG70...	[more]
XP_022992626.1	1.1e-85	93.65	peptidyl-prolyl cis-trans isomerase FKBP20-1 [Cucurbita maxima] >XP_022992627.1 ...	[more]

BLAST of MS003456 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M2S7	4.3e-74	77.25	Peptidyl-prolyl cis-trans isomerase FKBP20-1 OS=Arabidopsis thaliana OX=3702 GN=...	[more]
Q9QVC8	3.4e-26	59.46	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Rattus norvegicus OX=10116 GN=Fkbp4...	[more]
Q02790	9.8e-26	56.14	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Homo sapiens OX=9606 GN=FKBP4 PE=1 ...	[more]
P27124	1.3e-25	57.66	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Oryctolagus cuniculus OX=9986 GN=FK...	[more]
P30416	2.9e-25	57.66	Peptidyl-prolyl cis-trans isomerase FKBP4 OS=Mus musculus OX=10090 GN=Fkbp4 PE=1...	[more]

BLAST of MS003456 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BWZ8	3.1e-91	98.94	Peptidylprolyl isomerase OS=Momordica charantia OX=3673 GN=LOC111006266 PE=4 SV=...	[more]
A0A6J1FDU4	3.9e-86	93.65	Peptidylprolyl isomerase OS=Cucurbita moschata OX=3662 GN=LOC111444833 PE=4 SV=1	[more]
A0A6J1JQE3	5.1e-86	93.65	Peptidylprolyl isomerase OS=Cucurbita maxima OX=3661 GN=LOC111488915 PE=4 SV=1	[more]
A0A5A7UL42	6.7e-86	92.06	Peptidylprolyl isomerase OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffol...	[more]
A0A0A0KD69	1.9e-85	93.12	Peptidylprolyl isomerase OS=Cucumis sativus OX=3659 GN=Csa_6G008620 PE=4 SV=1	[more]

BLAST of MS003456 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55520.1	3.1e-75	77.25	FKBP-like peptidyl-prolyl cis-trans isomerase family protein	[more]
AT5G48570.1	2.0e-21	44.80	FKBP-type peptidyl-prolyl cis-trans isomerase family protein	[more]
AT3G25230.1	1.2e-15	40.41	rotamase FKBP 1	[more]
AT3G25230.2	1.2e-15	40.41	rotamase FKBP 1	[more]
AT5G48580.1	2.3e-14	42.00	FK506- and rapamycin-binding protein 15 kD-2	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25

Position :

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IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 132..166
None	No IPR available	GENE3D	3.10.50.40		coord: 2..125 e-value: 4.2E-37 score: 129.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..189
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 149..167
None	No IPR available	PANTHER	PTHR10516	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE	coord: 1..189
None	No IPR available	PANTHER	PTHR10516:SF412	PEPTIDYL-PROLYL CIS-TRANS ISOMERASE FKBP20-1	coord: 1..189
None	No IPR available	SUPERFAMILY	54534	FKBP-like	coord: 38..125
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PFAM	PF00254	FKBP_C	coord: 38..119 e-value: 2.3E-27 score: 95.1
IPR001179	FKBP-type peptidyl-prolyl cis-trans isomerase domain	PROSITE	PS50059	FKBP_PPIASE	coord: 33..122 score: 26.506481

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003456.1	MS003456.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0003755	peptidyl-prolyl cis-trans isomerase activity