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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. GTGGAAGGCGACGAGATTCTCGGCGATGGAGGGGGCGGCCAAGCAATTAGGGTTTTGGACGAGATTGTTGGTGGGATCGTTGGGGTTCCAGGCCAGGCCCAAGAAGACGGCGAGAGTGAACATGGAGTTGACGTTCACGATGCCGTCAAGGGC mRNA sequence GTGGAAGGCGACGAGATTCTCGGCGATGGAGGGGGCGGCCAAGCAATTAGGGTTTTGGACGAGATTGTTGGTGGGATCGTTGGGGTTCCAGGCCAGGCCCAAGAAGACGGCGAGAGTGAACATGGAGTTGACGTTCACGATGCCGTCAAGGGC Coding sequence (CDS) GTGGAAGGCGACGAGATTCTCGGCGATGGAGGGGGCGGCCAAGCAATTAGGGTTTTGGACGAGATTGTTGGTGGGATCGTTGGGGTTCCAGGCCAGGCCCAAGAAGACGGCGAGAGTGAACATGGAGTTGACGTTCACGATGCCGTCAAGGGC Protein sequence VEGDEILGDGGGGQAIRVLDEIVGGIVGVPGQAQEDGESEHGVDVHDAVKG
Homology
BLAST of MS003433 vs. NCBI nr
Match: QHO02878.1 (uncharacterized protein DS421_13g427550 [Arachis hypogaea]) HSP 1 Score: 65.1 bits (157), Expect = 2.0e-07 Identity = 33/50 (66.00%), Postives = 40/50 (80.00%), Query Frame = 0
Query: 1 VEGDEILGDGGGGQAIRVLDEIVGGIVGVPGQAQEDGESEHGVDVHDAVK 51
VEGDEILGDGGGG+A + E+V G+VGVP +A EDGE E GV VHD+V+
Sbjct: 90 VEGDEILGDGGGGRAGWIGVEVVRGVVGVPREADEDGEGEEGVHVHDSVQ 139
BLAST of MS003433 vs. NCBI nr
Match: QHO59029.1 (uncharacterized protein DS421_3g95610 [Arachis hypogaea]) HSP 1 Score: 63.5 bits (153), Expect = 5.9e-07 Identity = 32/50 (64.00%), Postives = 39/50 (78.00%), Query Frame = 0
Query: 1 VEGDEILGDGGGGQAIRVLDEIVGGIVGVPGQAQEDGESEHGVDVHDAVK 51
VEGD+ILGDGGGG+A + E+V G+VGVP +A EDGE E GV VHD V+
Sbjct: 141 VEGDDILGDGGGGRAGWIGVEVVRGVVGVPREADEDGEGEEGVHVHDGVQ 190
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| QHO02878.1 | 2.0e-07 | 66.00 | uncharacterized protein DS421_13g427550 [Arachis hypogaea] | [more] |
| QHO59029.1 | 5.9e-07 | 64.00 | uncharacterized protein DS421_3g95610 [Arachis hypogaea] | [more] |
| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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| Match Name | E-value | Identity | Description | |
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InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
| IPR Term | IPR Description | Source | Source Term | Source Description | Alignment |
|---|
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 37..51 |
| None | No IPR available | MOBIDB_LITE | mobidb-lite | disorder_prediction | coord: 30..51 |
Relationships
The following mRNA feature(s) are a part of this gene:
| Feature Name | Unique Name | Type |
|---|
| MS003433.1 | MS003433.1 | mRNA |
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