MS003432 (gene) Bitter gourd (TR) v1

Overview


Name	MS003432
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Maternal effect embryo arrest
Location	scaffold234: 2821981 .. 2822496 (+)
RNA-Seq Expression	MS003432
Synteny	MS003432

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGGCCGGCACCAGCATTCACATTTCAGCCCTTGACGGCATCGTGAACGTCAACTCCATGTTCACTCTCGCCGTCTTCTTGGGCCTGGCCTGGAACCCCAACGATCCCACCAACAATCTCGTCCAAAACCCTAATTGCTTGGCCGCCCCCTCCATCGCCGAGAATCTCGTCGCCTTCCACGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTCGGCCTCAAGCAGGCCATACGGATCTCAAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTCCGCGTCAACAAATCGGCCCTTCGGATCGGGATGCTGATTTCGGGCATCGGATCGGTTTGCGGCTGCGGATTCCTCATGATGGCCCTAATTAACGTCGTCCAGATCAAGCTCGGCACTCTCAGCTGCGGCAGCTCTCAGACTTTCGCGGCGGTGGTTCCGCTCGTGATTTTGGTTCCGATTGCCCTCATTGTTTACATCTGTCTTGTTTCCTACGCTTTTATCAAT

mRNA sequence

ATGCCGGCCGGCACCAGCATTCACATTTCAGCCCTTGACGGCATCGTGAACGTCAACTCCATGTTCACTCTCGCCGTCTTCTTGGGCCTGGCCTGGAACCCCAACGATCCCACCAACAATCTCGTCCAAAACCCTAATTGCTTGGCCGCCCCCTCCATCGCCGAGAATCTCGTCGCCTTCCACGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTCGGCCTCAAGCAGGCCATACGGATCTCAAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTCCGCGTCAACAAATCGGCCCTTCGGATCGGGATGCTGATTTCGGGCATCGGATCGGTTTGCGGCTGCGGATTCCTCATGATGGCCCTAATTAACGTCGTCCAGATCAAGCTCGGCACTCTCAGCTGCGGCAGCTCTCAGACTTTCGCGGCGGTGGTTCCGCTCGTGATTTTGGTTCCGATTGCCCTCATTGTTTACATCTGTCTTGTTTCCTACGCTTTTATCAAT

Coding sequence (CDS)

ATGCCGGCCGGCACCAGCATTCACATTTCAGCCCTTGACGGCATCGTGAACGTCAACTCCATGTTCACTCTCGCCGTCTTCTTGGGCCTGGCCTGGAACCCCAACGATCCCACCAACAATCTCGTCCAAAACCCTAATTGCTTGGCCGCCCCCTCCATCGCCGAGAATCTCGTCGCCTTCCACGTCTACTCCTTCAGCTCCTTCCTCTTCTCCAGCTTAATCGCCCTCGGCCTCAAGCAGGCCATACGGATCTCAAAAAGCCCCTTCTATCACCCGACCGAGTTCTTCGTCCGCGTCAACAAATCGGCCCTTCGGATCGGGATGCTGATTTCGGGCATCGGATCGGTTTGCGGCTGCGGATTCCTCATGATGGCCCTAATTAACGTCGTCCAGATCAAGCTCGGCACTCTCAGCTGCGGCAGCTCTCAGACTTTCGCGGCGGTGGTTCCGCTCGTGATTTTGGTTCCGATTGCCCTCATTGTTTACATCTGTCTTGTTTCCTACGCTTTTATCAAT

Protein sequence

MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN

Homology

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BLAST of MS003432 vs. NCBI nr
Match: XP_022134461.1 (uncharacterized protein LOC111006700 [Momordica charantia])

HSP 1 Score: 328.6 bits (841), Expect = 3.3e-86
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALI+YICLVSYAFIN
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIIYICLVSYAFIN 225

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BLAST of MS003432 vs. NCBI nr
Match: XP_038885575.1 (uncharacterized protein LOC120075905 [Benincasa hispida])

HSP 1 Score: 315.1 bits (806), Expect = 3.8e-82
Identity = 159/172 (92.44%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNL+Q+PNCLA PS+A NLVAF
Sbjct: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLIQSPNCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNK+A+R+GML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKTAVRVGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLG LSCGSSQTFAAVVPLVILVP AL++YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGVLSCGSSQTFAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. NCBI nr
Match: XP_004138443.1 (uncharacterized protein LOC101208865 [Cucumis sativus])

HSP 1 Score: 313.9 bits (803), Expect = 8.4e-82
Identity = 159/172 (92.44%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+PNCLA PS+A NLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNK+ALRIGML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. NCBI nr
Match: XP_022990564.1 (uncharacterized protein LOC111487406 [Cucurbita maxima] >XP_023515774.1 uncharacterized protein LOC111779812 [Cucurbita pepo subsp. pepo] >KAG6602640.1 hypothetical protein SDJN03_07873, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033327.1 hypothetical protein SDJN02_07382, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 313.2 bits (801), Expect = 1.4e-81
Identity = 157/172 (91.28%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MP GT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLAAP++AENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNK+A+RIGML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. NCBI nr
Match: XP_008441411.1 (PREDICTED: uncharacterized protein LOC103485537 [Cucumis melo] >KAA0041472.1 uncharacterized protein E6C27_scaffold6G00540 [Cucumis melo var. makuwa] >TYK24346.1 uncharacterized protein E5676_scaffold205G001250 [Cucumis melo var. makuwa])

HSP 1 Score: 312.0 bits (798), Expect = 3.2e-81
Identity = 159/172 (92.44%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+P+CLA PS+A NLVAF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVNK+ALRIGML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. ExPASy TrEMBL
Match: A0A6J1BXU9 (uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006700 PE=4 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 1.6e-86
Identity = 171/172 (99.42%), Postives = 172/172 (100.00%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF
Sbjct: 54  MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 113

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG
Sbjct: 114 HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 173

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALI+YICLVSYAFIN
Sbjct: 174 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIIYICLVSYAFIN 225

[Close]

BLAST of MS003432 vs. ExPASy TrEMBL
Match: A0A0A0KA88 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1)

HSP 1 Score: 313.9 bits (803), Expect = 4.1e-82
Identity = 159/172 (92.44%), Postives = 168/172 (97.67%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+PNCLA PS+A NLV+F
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPNCLAGPSVAANLVSF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRI+KSPFYHPTEFF+RVNK+ALRIGML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRIAKSPFYHPTEFFIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. ExPASy TrEMBL
Match: A0A6J1JSD7 (uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406 PE=4 SV=1)

HSP 1 Score: 313.2 bits (801), Expect = 7.0e-82
Identity = 157/172 (91.28%), Postives = 170/172 (98.84%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MP GT+IH+SALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLV++PNCLAAP++AENLVAF
Sbjct: 1   MPTGTNIHMSALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVESPNCLAAPNVAENLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISK+PFYHPTEFFVRVNK+A+RIGML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKTPFYHPTEFFVRVNKTAVRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQT+AAVVPLVILVP AL++YICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTYAAVVPLVILVPFALVIYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. ExPASy TrEMBL
Match: A0A5D3DL39 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001250 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81
Identity = 159/172 (92.44%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+P+CLA PS+A NLVAF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVNK+ALRIGML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. ExPASy TrEMBL
Match: A0A1S3B446 (uncharacterized protein LOC103485537 OS=Cucumis melo OX=3656 GN=LOC103485537 PE=4 SV=1)

HSP 1 Score: 312.0 bits (798), Expect = 1.6e-81
Identity = 159/172 (92.44%), Postives = 167/172 (97.09%), Query Frame = 0


Query: 1   MPAGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAF 60
           MP GTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDP NNL+Q+P+CLA PS+A NLVAF
Sbjct: 1   MPTGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPMNNLIQSPSCLAGPSVAANLVAF 60

Query: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCG 120
           HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEF +RVNK+ALRIGML+SGIGSVCGCG
Sbjct: 61  HVYSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFLIRVNKTALRIGMLVSGIGSVCGCG 120

Query: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAFIN 173
           FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIAL+VYICLVSYAFIN
Sbjct: 121 FLMMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALVVYICLVSYAFIN 172

[Close]

BLAST of MS003432 vs. TAIR 10
Match: AT5G05950.1 (maternal effect embryo arrest 60 )

HSP 1 Score: 223.8 bits (569), Expect = 1.1e-58
Identity = 120/173 (69.36%), Postives = 144/173 (83.24%), Query Frame = 0


Query: 5   TSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHVYS 64
           TSIHI+ALDGIVNVNS+FTLAVF+GLAWNP DP N+LV +PNC+    +AENLVAFHVYS
Sbjct: 3   TSIHITALDGIVNVNSLFTLAVFIGLAWNPTDPDNSLVTDPNCVPTARMAENLVAFHVYS 62

Query: 65  FSSFLFSSLIALGLKQAIRISKSPFYH------PTEFFVRVNKSALRIGMLISGIGSVCG 124
           F+SFLFSSLIALGLKQA+R++ +  +H      P  ++  VNK+ALR GM+ SG+GSVCG
Sbjct: 63  FASFLFSSLIALGLKQAMRLNIASSFHISTRIDPVVYY--VNKTALRFGMVTSGLGSVCG 122

Query: 125 CGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLVILVPIALIVYICLVSYAF 171
           CGFLM+ALINVVQIKLGTL CG+S  T+AAVVPLVILVP AL +Y+ L+ YAF
Sbjct: 123 CGFLMLALINVVQIKLGTLGCGASGHTYAAVVPLVILVPSALFIYVSLMLYAF 173

[Close]

BLAST of MS003432 vs. TAIR 10
Match: AT3G46890.1 (BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TAIR:AT5G05950.1); Has 124 Blast hits to 124 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 124; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 144.4 bits (363), Expect = 8.3e-35
Identity = 96/185 (51.89%), Postives = 128/185 (69.19%), Query Frame = 0


Query: 5   TSIHISALDGIVNVNSMFTLAVFLGLAWNPN---DPTNNLVQNPN---CLAA--PSIAEN 64
           T IH++A+DGIVNVNS+F+LA+FLGL  + N     +++  +N +   C++A  P++AE 
Sbjct: 19  TLIHVTAIDGIVNVNSLFSLALFLGLTTSGNITFPVSSSASENHHLRRCISAKGPALAER 78

Query: 65  LVAFHVYSFSSFLFSSLIALGLKQAIRISKSPFYH---PTEFFV------RVNKSALRIG 124
           LV+ HVYSFS FLFSSLIA+ LKQAIR + +         E  V      RVN +ALR+G
Sbjct: 79  LVSSHVYSFSLFLFSSLIAMSLKQAIRTTTTTTNGNCLEEEARVLNAGEGRVNLAALRVG 138

Query: 125 MLISGIGSVCGCGFLMMALINVVQIKLGTLSCGSS-QTFAAVVPLVILVPIALIVYICLV 172
           ++ S + SV GCGFL MAL+++VQIKLG L C  S    AA+VPLV+LVP ALI+Y+ LV
Sbjct: 139 IVASCVASVLGCGFLTMALVDLVQIKLGPLECKRSFHALAAIVPLVVLVPSALIIYVFLV 198

[Close]

BLAST of MS003432 vs. TAIR 10
Match: AT3G07510.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 9.1e-34
Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 3   AGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHV 62
           A TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L Q  +C A+  +A+ L+ F V
Sbjct: 22  ATTSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEV 81

Query: 63  YSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCGFL 122
            SFS FLFSSL+A GLK A+ +  S   +   F   +N   LR GM+ S +GSV GC FL
Sbjct: 82  VSFSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFL 141

Query: 123 MMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF 171
           M++++NV+QI+LG LSCGS     AV  LV LV  AL++YI    YAF
Sbjct: 142 MLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

[Close]

BLAST of MS003432 vs. TAIR 10
Match: AT3G07510.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 22 plant structures; EXPRESSED DURING: 13 growth stages; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G01580.1); Has 133 Blast hits to 133 proteins in 14 species: Archae - 0; Bacteria - 4; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 141.0 bits (354), Expect = 9.1e-34
Identity = 83/168 (49.40%), Postives = 112/168 (66.67%), Query Frame = 0


Query: 3   AGTSIHISALDGIVNVNSMFTLAVFLGLAWNPNDPTNNLVQNPNCLAAPSIAENLVAFHV 62
           A TS+H+SALDG+VNVNS+FT+AVF+GL+       ++L Q  +C A+  +A+ L+ F V
Sbjct: 22  ATTSVHVSALDGLVNVNSLFTIAVFVGLSL-ATPGQHSLEQRSSCDASADVAKKLLVFEV 81

Query: 63  YSFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCGFL 122
            SFS FLFSSL+A GLK A+ +  S   +   F   +N   LR GM+ S +GSV GC FL
Sbjct: 82  VSFSFFLFSSLVAQGLKLALNLLNSKDVNEI-FRAHINIKVLRWGMMASAVGSVMGCLFL 141

Query: 123 MMALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF 171
           M++++NV+QI+LG LSCGS     AV  LV LV  AL++YI    YAF
Sbjct: 142 MLSMVNVIQIRLGLLSCGSKSAAQAVATLVTLVSSALLIYISTAIYAF 187

[Close]

BLAST of MS003432 vs. TAIR 10
Match: AT2G01580.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G07510.2); Has 129 Blast hits to 129 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 129; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 124.8 bits (312), Expect = 6.8e-29
Identity = 73/167 (43.71%), Postives = 111/167 (66.47%), Query Frame = 0


Query: 5   TSIHISALDGIVNVNSMFTLAVFLGLAWN-PNDPTNNLVQNPNCLAAPSIAENLVAFHVY 64
           TS+H++ALDGIV+ NS+FT+AVF+G++++ P+D T  L     C A   +  +LV F V 
Sbjct: 26  TSVHVTALDGIVSANSLFTVAVFVGISFDQPSDLT--LTDRTECSAGRDVERDLVVFEVI 85

Query: 65  SFSSFLFSSLIALGLKQAIRISKSPFYHPTEFFVRVNKSALRIGMLISGIGSVCGCGFLM 124
           SF+ FLFSSL+A G+K AI +  S       F   +N+  LR G++ +  GS+ GC FL+
Sbjct: 86  SFAFFLFSSLVAQGMKLAINLLNSKETDEV-FKANINRDVLRFGVVGAAGGSILGCVFLL 145

Query: 125 MALINVVQIKLGTLSCGSSQTFAAVVPLVILVPIALIVYICLVSYAF 171
           +++++V+Q++LG LSCG++     V+ LV+LV  AL VYI  V Y+F
Sbjct: 146 LSIVDVIQLRLGLLSCGNALAIHTVLVLVVLVSSALSVYIFTVFYSF 189

The following BLAST results are available for this feature:

BLAST of MS003432 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134461.1	3.3e-86	99.42	uncharacterized protein LOC111006700 [Momordica charantia]	[more]
XP_038885575.1	3.8e-82	92.44	uncharacterized protein LOC120075905 [Benincasa hispida]	[more]
XP_004138443.1	8.4e-82	92.44	uncharacterized protein LOC101208865 [Cucumis sativus]	[more]
XP_022990564.1	1.4e-81	91.28	uncharacterized protein LOC111487406 [Cucurbita maxima] >XP_023515774.1 uncharac...	[more]
XP_008441411.1	3.2e-81	92.44	PREDICTED: uncharacterized protein LOC103485537 [Cucumis melo] >KAA0041472.1 unc...	[more]

BLAST of MS003432 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS003432 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BXU9	1.6e-86	99.42	uncharacterized protein LOC111006700 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A0A0KA88	4.1e-82	92.44	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G008850 PE=4 SV=1	[more]
A0A6J1JSD7	7.0e-82	91.28	uncharacterized protein LOC111487406 OS=Cucurbita maxima OX=3661 GN=LOC111487406...	[more]
A0A5D3DL39	1.6e-81	92.44	Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold...	[more]
A0A1S3B446	1.6e-81	92.44	uncharacterized protein LOC103485537 OS=Cucumis melo OX=3656 GN=LOC103485537 PE=...	[more]

BLAST of MS003432 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G05950.1	1.1e-58	69.36	maternal effect embryo arrest 60	[more]
AT3G46890.1	8.3e-35	51.89	BEST Arabidopsis thaliana protein match is: maternal effect embryo arrest 60 (TA...	[more]
AT3G07510.1	9.1e-34	49.40	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]
AT3G07510.2	9.1e-34	49.40	unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic...	[more]
AT2G01580.1	6.8e-29	43.71	unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR33430	MATERNAL EFFECT EMBRYO ARREST PROTEIN	coord: 3..171
None	No IPR available	PANTHER	PTHR33430:SF7	OS07G0240400 PROTEIN	coord: 3..171

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003432.1	MS003432.1	mRNA