MS003421 (gene) Bitter gourd (TR) v1

Overview


Name	MS003421
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Lectin_legB domain-containing protein
Location	scaffold234: 2757472 .. 2758437 (-)
RNA-Seq Expression	MS003421
Synteny	MS003421

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

CTCAACTTGTGCGGAATAATGGTTAATTTGCCTTCTCACCTCCTAATCTTCCTCTTCTTTTACTACTTTCTCCACCCCGTTTCTTCATTCACGCTTCCAACCCTCTCCAACAACCCCAATTTCGATCCCCACATTGCCCTCATCGGAGACGCCGCGGTCGTCCACGCCGACGCCGACGCCGACGATTCTTTCGTCAAGTTAACCCGCCCCGTCGCATCCAGCTTCGGCCTTGTACTCAACGCTAAACCCTTGAGGCTTCATGATTCGTCGTCGTTTTCTACCCAATTCGCGTTCTGGGTCTCGCCGGACAACGGGGATGGCCTCGTTCTTTCGCTCTTCCCCGGAAGCTTTGAGCTCTCACGGGAAAAGTGGATACATGCCATCGAATTTGTCTCCGCCAATGTGAGTAATTTGAGTGGAGGGTATCTGAAGACGGAGAGGGGGGTTCTCGTTCCGACCATTGGGGGAAAATTGACATCGTGGGTCGATTTCGATTCGAGCTCCAAAATGGTAGAAATCAGGTTGAGTAAATTTGGGGATTCGCGGCCTTACGATCCCTCATTTGCGTACCCAATTGATCTGGCGAGTAAATGCGAGGGGGAGGAAGTATTTGTGGGATTAAGCTCGTGGAATAGCAAGCCATCTCAGTGGAGCAGAGTTTTCTCGTGGCGGTTCGGTCTGAGAAATATCCCCAAGGGGATGCATTCGCTGCCGGTGGATCCACGGCGGCGTTCTGAGAAACAGGGCGAGGAGTTGCAGAAGAATCATCTTCTGCCTCTTACGATATTTGCTGGGCTGATCTTCGCAACCGGTTGTGGGGCGTTAATGGCGTTTGTGGTGCTGTTCATGTGGGTAATTGCGGCCAATAGAAACGCCATCTTTGCGGCGGAGCCCCAATCTGTGGATTTCCAGTACCAAAAGGTTAGTGTAGTGGTTGTAGAGGAGGGATCGAAAGATGTCAGCACG

mRNA sequence

CTCAACTTGTGCGGAATAATGGTTAATTTGCCTTCTCACCTCCTAATCTTCCTCTTCTTTTACTACTTTCTCCACCCCGTTTCTTCATTCACGCTTCCAACCCTCTCCAACAACCCCAATTTCGATCCCCACATTGCCCTCATCGGAGACGCCGCGGTCGTCCACGCCGACGCCGACGCCGACGATTCTTTCGTCAAGTTAACCCGCCCCGTCGCATCCAGCTTCGGCCTTGTACTCAACGCTAAACCCTTGAGGCTTCATGATTCGTCGTCGTTTTCTACCCAATTCGCGTTCTGGGTCTCGCCGGACAACGGGGATGGCCTCGTTCTTTCGCTCTTCCCCGGAAGCTTTGAGCTCTCACGGGAAAAGTGGATACATGCCATCGAATTTGTCTCCGCCAATGTGAGTAATTTGAGTGGAGGGTATCTGAAGACGGAGAGGGGGGTTCTCGTTCCGACCATTGGGGGAAAATTGACATCGTGGGTCGATTTCGATTCGAGCTCCAAAATGGTAGAAATCAGGTTGAGTAAATTTGGGGATTCGCGGCCTTACGATCCCTCATTTGCGTACCCAATTGATCTGGCGAGTAAATGCGAGGGGGAGGAAGTATTTGTGGGATTAAGCTCGTGGAATAGCAAGCCATCTCAGTGGAGCAGAGTTTTCTCGTGGCGGTTCGGTCTGAGAAATATCCCCAAGGGGATGCATTCGCTGCCGGTGGATCCACGGCGGCGTTCTGAGAAACAGGGCGAGGAGTTGCAGAAGAATCATCTTCTGCCTCTTACGATATTTGCTGGGCTGATCTTCGCAACCGGTTGTGGGGCGTTAATGGCGTTTGTGGTGCTGTTCATGTGGGTAATTGCGGCCAATAGAAACGCCATCTTTGCGGCGGAGCCCCAATCTGTGGATTTCCAGTACCAAAAGGTTAGTGTAGTGGTTGTAGAGGAGGGATCGAAAGATGTCAGCACG

Coding sequence (CDS)

CTCAACTTGTGCGGAATAATGGTTAATTTGCCTTCTCACCTCCTAATCTTCCTCTTCTTTTACTACTTTCTCCACCCCGTTTCTTCATTCACGCTTCCAACCCTCTCCAACAACCCCAATTTCGATCCCCACATTGCCCTCATCGGAGACGCCGCGGTCGTCCACGCCGACGCCGACGCCGACGATTCTTTCGTCAAGTTAACCCGCCCCGTCGCATCCAGCTTCGGCCTTGTACTCAACGCTAAACCCTTGAGGCTTCATGATTCGTCGTCGTTTTCTACCCAATTCGCGTTCTGGGTCTCGCCGGACAACGGGGATGGCCTCGTTCTTTCGCTCTTCCCCGGAAGCTTTGAGCTCTCACGGGAAAAGTGGATACATGCCATCGAATTTGTCTCCGCCAATGTGAGTAATTTGAGTGGAGGGTATCTGAAGACGGAGAGGGGGGTTCTCGTTCCGACCATTGGGGGAAAATTGACATCGTGGGTCGATTTCGATTCGAGCTCCAAAATGGTAGAAATCAGGTTGAGTAAATTTGGGGATTCGCGGCCTTACGATCCCTCATTTGCGTACCCAATTGATCTGGCGAGTAAATGCGAGGGGGAGGAAGTATTTGTGGGATTAAGCTCGTGGAATAGCAAGCCATCTCAGTGGAGCAGAGTTTTCTCGTGGCGGTTCGGTCTGAGAAATATCCCCAAGGGGATGCATTCGCTGCCGGTGGATCCACGGCGGCGTTCTGAGAAACAGGGCGAGGAGTTGCAGAAGAATCATCTTCTGCCTCTTACGATATTTGCTGGGCTGATCTTCGCAACCGGTTGTGGGGCGTTAATGGCGTTTGTGGTGCTGTTCATGTGGGTAATTGCGGCCAATAGAAACGCCATCTTTGCGGCGGAGCCCCAATCTGTGGATTTCCAGTACCAAAAGGTTAGTGTAGTGGTTGTAGAGGAGGGATCGAAAGATGTCAGCACG

Protein sequence

LNLCGIMVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADADDSFVKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSFELSREKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDPRRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSVDFQYQKVSVVVVEEGSKDVST

Homology

[Close]

BLAST of MS003421 vs. NCBI nr
Match: XP_022133454.1 (uncharacterized protein LOC111006026 [Momordica charantia])

HSP 1 Score: 631.3 bits (1627), Expect = 4.5e-177
Identity = 313/316 (99.05%), Postives = 315/316 (99.68%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADADDSFVK 66
           MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPH+ALIGDAAVVHADADADDSFVK
Sbjct: 1   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHVALIGDAAVVHADADADDSFVK 60

Query: 67  LTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSFELSREKWIH 126
           LTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSFELSREKWIH
Sbjct: 61  LTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSFELSREKWIH 120

Query: 127 AIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDP 186
           AIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDP
Sbjct: 121 AIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDP 180

Query: 187 SFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDPRRRSE 246
           SFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP+RRSE
Sbjct: 181 SFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDPQRRSE 240

Query: 247 KQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSVDFQYQ 306
           KQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSVDFQYQ
Sbjct: 241 KQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSVDFQYQ 300

Query: 307 KVSVVVVEEGSKDVST 323
           KVSVVVVEEG KDVST
Sbjct: 301 KVSVVVVEEGLKDVST 316

[Close]

BLAST of MS003421 vs. NCBI nr
Match: XP_023553507.1 (uncharacterized protein LOC111810901 [Cucurbita pepo subsp. pepo] >XP_023553516.1 uncharacterized protein LOC111810901 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 451.8 bits (1161), Expect = 4.9e-123
Identity = 233/321 (72.59%), Postives = 260/321 (81.00%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHAD--ADADDSF 66
           MV+  S  L  +FF+ FLHP+SSF L  L   PNFDPHIALIGDA +V  D   D  DSF
Sbjct: 1   MVDFSSPFLFSVFFFSFLHPISSFNLRALPKEPNFDPHIALIGDAVLVDGDGHGDCGDSF 60

Query: 67  VKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGS---FELSR 126
           VKLTRPVASSFGL+L+ KPL+LH S+SF+TQF F VSPDNGDGLVLSLF G     ++S 
Sbjct: 61  VKLTRPVASSFGLLLHNKPLKLHGSTSFNTQFTFAVSPDNGDGLVLSLFRGGDFPHKISP 120

Query: 127 EKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDS 186
           EKW+H IEFVS N SNL+GG LK E+G++VP  GGKLTSWVD+DSS K VEIRLSKFG+S
Sbjct: 121 EKWLHRIEFVSGNGSNLNGGILKMEKGIVVPNNGGKLTSWVDYDSSLKTVEIRLSKFGES 180

Query: 187 RPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP 246
           RPYDP  AYPIDL+SKCEG  VFVGLSS NSK S+WSRVFSWRFGLRN+PK MHS+PVDP
Sbjct: 181 RPYDPLLAYPIDLSSKCEGRGVFVGLSSGNSKSSEWSRVFSWRFGLRNVPKWMHSMPVDP 240

Query: 247 RRRSEKQGEE-LQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQS 306
           RR S KQ EE  QKNHL PLTI AGLIFATGCGALMAF+VLF+W IA NRNAIF AEPQS
Sbjct: 241 RRPSLKQDEEGSQKNHLRPLTIVAGLIFATGCGALMAFLVLFVWAIAGNRNAIFVAEPQS 300

Query: 307 VDFQYQKVSVVVVEEGSKDVS 322
           VDFQY+KVS+VV  EGSKD S
Sbjct: 301 VDFQYEKVSLVVEVEGSKDDS 321

[Close]

BLAST of MS003421 vs. NCBI nr
Match: XP_022961282.1 (uncharacterized protein LOC111461824 [Cucurbita moschata])

HSP 1 Score: 451.4 bits (1160), Expect = 6.3e-123
Identity = 234/319 (73.35%), Postives = 260/319 (81.50%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADAD--DSF 66
           MV+  S LL  +F + FLHP+SSF L +L   PNFDPHIALIGDA +V  D   D  DSF
Sbjct: 1   MVDFSSPLLFSVFLFSFLHPISSFNLRSLPKQPNFDPHIALIGDAVLVDGDGHGDFGDSF 60

Query: 67  VKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGS---FELSR 126
           VKLTRPVASSFGL+L+ KPL+LH S+SF TQF F VSPDNGDG+VLSLFPG     E+S 
Sbjct: 61  VKLTRPVASSFGLLLHNKPLKLHGSTSFYTQFTFAVSPDNGDGIVLSLFPGGGFPDEISP 120

Query: 127 EKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDS 186
           EKW+H I FVS N SNLSGG LK E+G++VP  GGKLTSWVD+DSSSK VEIRLSKFG+S
Sbjct: 121 EKWLHRIGFVSGNGSNLSGGILKMEKGIVVPNNGGKLTSWVDYDSSSKTVEIRLSKFGES 180

Query: 187 RPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP 246
           RPYDP  AYPIDL+SKCEG EVFVGLSS NSK S+WSRVFSWRFGLRN+PK MHS+PVDP
Sbjct: 181 RPYDPLLAYPIDLSSKCEGREVFVGLSSGNSKSSEWSRVFSWRFGLRNVPKWMHSMPVDP 240

Query: 247 RRRSEKQGEE-LQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQS 306
           RR S KQ EE  QKNHL PLTI AGLIFATGCGALMAF+VLF+W IA NRNAI  AEPQS
Sbjct: 241 RRPSLKQDEEGSQKNHLRPLTIVAGLIFATGCGALMAFLVLFVWAIAGNRNAISVAEPQS 300

Query: 307 VDFQYQKVSVVVVEEGSKD 320
           VDFQY+KVS +V EEGSKD
Sbjct: 301 VDFQYEKVS-LVAEEGSKD 318

[Close]

BLAST of MS003421 vs. NCBI nr
Match: XP_038885984.1 (uncharacterized protein LOC120076289 [Benincasa hispida])

HSP 1 Score: 417.2 bits (1071), Expect = 1.3e-112
Identity = 220/319 (68.97%), Postives = 255/319 (79.94%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADADD--SF 66
           MVNL S +L  +F + FL P+SSFT P     PNFDP I+LIGDAA V +D DA    SF
Sbjct: 1   MVNLSSQILFSIFLFQFLRPISSFTFP---KQPNFDPQISLIGDAAFVDSDGDAQGGASF 60

Query: 67  VKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFP-GSF--ELSR 126
           VKLTRPVASSFGL+L  KPL++HDS+SF+TQF F VSPDNGDGLVL L P G F  E+S 
Sbjct: 61  VKLTRPVASSFGLLLFNKPLKIHDSTSFNTQFTFSVSPDNGDGLVLLLVPEGVFPGEVSP 120

Query: 127 EKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDS 186
           ++W+H+IEF+SA   NLSGGY+K+E+G+L+P  GGK TSWVD+D  SK++EIRLSKFG+S
Sbjct: 121 DRWVHSIEFISA---NLSGGYVKSEKGILLPDNGGKFTSWVDYD--SKIMEIRLSKFGES 180

Query: 187 RPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP 246
           RPYDPS  YPIDL+ KC G EVFVGLSSWNSK S+WSRVFSWRFGLRN+ K MHSLPVDP
Sbjct: 181 RPYDPSLVYPIDLSIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGLRNVAKWMHSLPVDP 240

Query: 247 RRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSV 306
           R+RS++Q      NH  PLTIFA LIF TGCG L+AF+VLFMW IA NRNAIF AEPQSV
Sbjct: 241 RQRSDEQ------NHSHPLTIFAWLIFGTGCGGLIAFLVLFMWAIAGNRNAIFEAEPQSV 300

Query: 307 DFQYQKVSVVVVEEGSKDV 321
           DFQY+KVS VVVEEG KDV
Sbjct: 301 DFQYEKVS-VVVEEGFKDV 304

[Close]

BLAST of MS003421 vs. NCBI nr
Match: XP_004138574.2 (uncharacterized protein LOC101219233 [Cucumis sativus] >KGN45764.1 hypothetical protein Csa_005767 [Cucumis sativus])

HSP 1 Score: 409.8 bits (1052), Expect = 2.1e-110
Identity = 215/325 (66.15%), Postives = 249/325 (76.62%), Query Frame = 0


Query: 1   LNLCGIMVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADA-- 60
           L    IMV+  S  L+ +F + FLHP+SSFT P     PNFDP ++LIGDAA V  DA  
Sbjct: 17  LTFFAIMVHFSSQFLLSIFLFQFLHPISSFTFP---KQPNFDPQLSLIGDAAFVSTDAHL 76

Query: 61  DADDSFVKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSF- 120
               SFVKLTRP+ASSFGL+L+ KPL +H+S+SF+T F F VSP+NGDGL+LSLFPG   
Sbjct: 77  HGGASFVKLTRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLILSLFPGGVF 136

Query: 121 --ELSREKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRL 180
             E+S EKW+H+I+FVSA   NLS GY+K ERG+L+P  GGK TSWVD+D  SKMVEIRL
Sbjct: 137 PDEVSPEKWVHSIQFVSA---NLSDGYVKPERGILLPNNGGKFTSWVDYD--SKMVEIRL 196

Query: 181 SKFGDSRPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMH 240
           SK+G+SRPYD    YPIDL  KC G EVFVGLSSWNSK S+WSRVFSWRFG+RN+ K MH
Sbjct: 197 SKYGESRPYDSLLEYPIDLGIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKWMH 256

Query: 241 SLPVDPRRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFA 300
           SLPVDPRR S++Q      NH  PLTIFA +IF TGCGALMAF+VLFMW IA NRNAIF 
Sbjct: 257 SLPVDPRRGSDEQ------NHSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFG 316

Query: 301 AEPQSVDFQYQKVSVVVVEEGSKDV 321
            EPQSVDFQY+KVS VVVEEG KDV
Sbjct: 317 GEPQSVDFQYEKVS-VVVEEGLKDV 326

[Close]

BLAST of MS003421 vs. ExPASy TrEMBL
Match: A0A6J1BW10 (uncharacterized protein LOC111006026 OS=Momordica charantia OX=3673 GN=LOC111006026 PE=3 SV=1)

HSP 1 Score: 631.3 bits (1627), Expect = 2.2e-177
Identity = 313/316 (99.05%), Postives = 315/316 (99.68%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADADDSFVK 66
           MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPH+ALIGDAAVVHADADADDSFVK
Sbjct: 1   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHVALIGDAAVVHADADADDSFVK 60

Query: 67  LTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSFELSREKWIH 126
           LTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSFELSREKWIH
Sbjct: 61  LTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSFELSREKWIH 120

Query: 127 AIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDP 186
           AIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDP
Sbjct: 121 AIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDP 180

Query: 187 SFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDPRRRSE 246
           SFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP+RRSE
Sbjct: 181 SFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDPQRRSE 240

Query: 247 KQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSVDFQYQ 306
           KQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSVDFQYQ
Sbjct: 241 KQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSVDFQYQ 300

Query: 307 KVSVVVVEEGSKDVST 323
           KVSVVVVEEG KDVST
Sbjct: 301 KVSVVVVEEGLKDVST 316

[Close]

BLAST of MS003421 vs. ExPASy TrEMBL
Match: A0A6J1H9S2 (uncharacterized protein LOC111461824 OS=Cucurbita moschata OX=3662 GN=LOC111461824 PE=3 SV=1)

HSP 1 Score: 451.4 bits (1160), Expect = 3.1e-123
Identity = 234/319 (73.35%), Postives = 260/319 (81.50%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADAD--DSF 66
           MV+  S LL  +F + FLHP+SSF L +L   PNFDPHIALIGDA +V  D   D  DSF
Sbjct: 1   MVDFSSPLLFSVFLFSFLHPISSFNLRSLPKQPNFDPHIALIGDAVLVDGDGHGDFGDSF 60

Query: 67  VKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGS---FELSR 126
           VKLTRPVASSFGL+L+ KPL+LH S+SF TQF F VSPDNGDG+VLSLFPG     E+S 
Sbjct: 61  VKLTRPVASSFGLLLHNKPLKLHGSTSFYTQFTFAVSPDNGDGIVLSLFPGGGFPDEISP 120

Query: 127 EKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDS 186
           EKW+H I FVS N SNLSGG LK E+G++VP  GGKLTSWVD+DSSSK VEIRLSKFG+S
Sbjct: 121 EKWLHRIGFVSGNGSNLSGGILKMEKGIVVPNNGGKLTSWVDYDSSSKTVEIRLSKFGES 180

Query: 187 RPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP 246
           RPYDP  AYPIDL+SKCEG EVFVGLSS NSK S+WSRVFSWRFGLRN+PK MHS+PVDP
Sbjct: 181 RPYDPLLAYPIDLSSKCEGREVFVGLSSGNSKSSEWSRVFSWRFGLRNVPKWMHSMPVDP 240

Query: 247 RRRSEKQGEE-LQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQS 306
           RR S KQ EE  QKNHL PLTI AGLIFATGCGALMAF+VLF+W IA NRNAI  AEPQS
Sbjct: 241 RRPSLKQDEEGSQKNHLRPLTIVAGLIFATGCGALMAFLVLFVWAIAGNRNAISVAEPQS 300

Query: 307 VDFQYQKVSVVVVEEGSKD 320
           VDFQY+KVS +V EEGSKD
Sbjct: 301 VDFQYEKVS-LVAEEGSKD 318

[Close]

BLAST of MS003421 vs. ExPASy TrEMBL
Match: A0A0A0KA99 (Lectin_legB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009430 PE=3 SV=1)

HSP 1 Score: 409.8 bits (1052), Expect = 1.0e-110
Identity = 215/325 (66.15%), Postives = 249/325 (76.62%), Query Frame = 0


Query: 1   LNLCGIMVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADA-- 60
           L    IMV+  S  L+ +F + FLHP+SSFT P     PNFDP ++LIGDAA V  DA  
Sbjct: 17  LTFFAIMVHFSSQFLLSIFLFQFLHPISSFTFP---KQPNFDPQLSLIGDAAFVSTDAHL 76

Query: 61  DADDSFVKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSF- 120
               SFVKLTRP+ASSFGL+L+ KPL +H+S+SF+T F F VSP+NGDGL+LSLFPG   
Sbjct: 77  HGGASFVKLTRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLILSLFPGGVF 136

Query: 121 --ELSREKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRL 180
             E+S EKW+H+I+FVSA   NLS GY+K ERG+L+P  GGK TSWVD+D  SKMVEIRL
Sbjct: 137 PDEVSPEKWVHSIQFVSA---NLSDGYVKPERGILLPNNGGKFTSWVDYD--SKMVEIRL 196

Query: 181 SKFGDSRPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMH 240
           SK+G+SRPYD    YPIDL  KC G EVFVGLSSWNSK S+WSRVFSWRFG+RN+ K MH
Sbjct: 197 SKYGESRPYDSLLEYPIDLGIKCGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKWMH 256

Query: 241 SLPVDPRRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFA 300
           SLPVDPRR S++Q      NH  PLTIFA +IF TGCGALMAF+VLFMW IA NRNAIF 
Sbjct: 257 SLPVDPRRGSDEQ------NHSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFG 316

Query: 301 AEPQSVDFQYQKVSVVVVEEGSKDV 321
            EPQSVDFQY+KVS VVVEEG KDV
Sbjct: 317 GEPQSVDFQYEKVS-VVVEEGLKDV 326

[Close]

BLAST of MS003421 vs. ExPASy TrEMBL
Match: A0A5A7TDM9 (L-type lectin-domain containing receptor kinase VIII.1-like OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold205G001810 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 9.6e-109
Identity = 211/319 (66.14%), Postives = 247/319 (77.43%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADADD--SF 66
           MVN  S  L  +F + FLHP+SSFT P     PNFDP ++LIGDAA V  DA  +   SF
Sbjct: 1   MVNFSSQFLFSIFLFQFLHPISSFTFP---KQPNFDPQLSLIGDAAFVSTDAHVNGGASF 60

Query: 67  VKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSF---ELSR 126
           VKLTRP+ASSFGL+L+ KPL +H+S+SF+T F F VSP+NGDGLVLSLFPG     E+S 
Sbjct: 61  VKLTRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLVLSLFPGGIFPDEVSP 120

Query: 127 EKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDS 186
           EKW+H+I+FVSA   NLS GY+K E+G+L+P  GGK TSWVD+D  SKMVEIRL K+G+S
Sbjct: 121 EKWVHSIQFVSA---NLSDGYVKPEKGILLPNNGGKFTSWVDYD--SKMVEIRLGKYGES 180

Query: 187 RPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP 246
           RPYDP   YPIDLA K  G EVFVGLSSWNSK S+WSRVFSWRFG+RN+ K MHSLPVDP
Sbjct: 181 RPYDPLLEYPIDLAIKSGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKLMHSLPVDP 240

Query: 247 RRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSV 306
           RR S++Q      +H  PLTIFA +IF TGCGALMAF+VLFMW IA NRNAIF  EPQSV
Sbjct: 241 RRGSDEQ------DHSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFGGEPQSV 300

Query: 307 DFQYQKVSVVVVEEGSKDV 321
           +FQY+KV+ VVVEEG KDV
Sbjct: 301 NFQYEKVN-VVVEEGFKDV 304

[Close]

BLAST of MS003421 vs. ExPASy TrEMBL
Match: A0A1S3B3V6 (uncharacterized protein LOC103485717 OS=Cucumis melo OX=3656 GN=LOC103485717 PE=3 SV=1)

HSP 1 Score: 403.3 bits (1035), Expect = 9.6e-109
Identity = 211/319 (66.14%), Postives = 247/319 (77.43%), Query Frame = 0


Query: 7   MVNLPSHLLIFLFFYYFLHPVSSFTLPTLSNNPNFDPHIALIGDAAVVHADADADD--SF 66
           MVN  S  L  +F + FLHP+SSFT P     PNFDP ++LIGDAA V  DA  +   SF
Sbjct: 1   MVNFSSQFLFSIFLFQFLHPISSFTFP---KQPNFDPQLSLIGDAAFVSTDAHVNGGASF 60

Query: 67  VKLTRPVASSFGLVLNAKPLRLHDSSSFSTQFAFWVSPDNGDGLVLSLFPGSF---ELSR 126
           VKLTRP+ASSFGL+L+ KPL +H+S+SF+T F F VSP+NGDGLVLSLFPG     E+S 
Sbjct: 61  VKLTRPIASSFGLLLHNKPLTIHESTSFNTHFTFSVSPENGDGLVLSLFPGGIFPDEVSP 120

Query: 127 EKWIHAIEFVSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDS 186
           EKW+H+I+FVSA   NLS GY+K E+G+L+P  GGK TSWVD+D  SKMVEIRL K+G+S
Sbjct: 121 EKWVHSIQFVSA---NLSDGYVKPEKGILLPNNGGKFTSWVDYD--SKMVEIRLGKYGES 180

Query: 187 RPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPVDP 246
           RPYDP   YPIDLA K  G EVFVGLSSWNSK S+WSRVFSWRFG+RN+ K MHSLPVDP
Sbjct: 181 RPYDPLLEYPIDLAIKSGGREVFVGLSSWNSKSSEWSRVFSWRFGVRNVHKLMHSLPVDP 240

Query: 247 RRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQSV 306
           RR S++Q      +H  PLTIFA +IF TGCGALMAF+VLFMW IA NRNAIF  EPQSV
Sbjct: 241 RRGSDEQ------DHSYPLTIFAWVIFGTGCGALMAFLVLFMWAIAGNRNAIFGGEPQSV 300

Query: 307 DFQYQKVSVVVVEEGSKDV 321
           +FQY+KV+ VVVEEG KDV
Sbjct: 301 NFQYEKVN-VVVEEGFKDV 304

[Close]

BLAST of MS003421 vs. TAIR 10
Match: AT5G01090.1 (Concanavalin A-like lectin family protein )

HSP 1 Score: 123.6 bits (309), Expect = 2.8e-28
Identity = 99/331 (29.91%), Postives = 148/331 (44.71%), Query Frame = 0


Query: 28  SSFTLPTLSNNPNFDPHIALIGDAAVVHADADADDSFVKLTRPVASSFGLVLNAKPLRLH 87
           SSF+       P+FD ++AL GD+ +VH         ++LT  V+ S G V+  KP+RL 
Sbjct: 28  SSFSFNGFVKAPSFDNNVALFGDSKLVHGGPS-----IQLTDSVSRSEGRVIYKKPIRLF 87

Query: 88  D------SSSFSTQFAFWVSPDNGDGLVLSLFPGSFELS----------------REKWI 147
                  S SFST F+F +S + G  L   + P   +L                  +  +
Sbjct: 88  QGKERNFSGSFSTSFSFSMSDEIGSVLAFIMVPRGLDLRLFGRKGNNSSSGLGFLLKHKV 147

Query: 148 HAIEFVSANVSNLSGGYLKTERGVLVPTIGG---------KLTSWVDFDSSSKMVEIRLS 207
            A+EF  +   N  G  +       V  +           +L  W+D+++SSK +E+RLS
Sbjct: 148 VAVEFGISKRGNHVGILVGRPESGKVRKLSSFGHHFNEEKRLNCWIDYEASSKRIEVRLS 207

Query: 208 KFGDSRPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHS 267
                +P DP  +Y +DLA   +  +  VGL+S N   S+   + SW F LR+    +HS
Sbjct: 208 LSAALKPVDPFVSYSVDLAKLWKDGKFMVGLTSANGNTSKPVYLHSWSFKLRHPSMRIHS 267

Query: 268 LPVDPR--RRSEKQGE---ELQKNHLLPLTIFAGLIFATGCGALMAFVVLFMWVIAANRN 319
            P+DP    ++ K+GE   E++        I   L+    CG L A   L++W I  NR 
Sbjct: 268 QPLDPNDVSKTVKEGEKTVEVKGKGKCIWRILGALVLGAVCGTLGAMFALYLWTICGNRQ 327

[Close]

BLAST of MS003421 vs. TAIR 10
Match: AT3G09035.1 (Concanavalin A-like lectin family protein )

HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26
Identity = 96/310 (30.97%), Postives = 148/310 (47.74%), Query Frame = 0


Query: 28  SSFTLPTLSNNPNFDPHIALIGDAAVVHADADADDSFVKLTRPVASSFGLVLNAKPLRL- 87
           S F+      +P+FD  +AL GD+ +V+     D S ++LT  V  S G V+  KP+ L 
Sbjct: 27  SLFSFNGFVKSPSFDKRVALFGDSKLVN-----DSSLIQLTDSVTRSVGRVVYKKPINLF 86

Query: 88  ----HDSSSFSTQFAF-WVSPDNGDG-LVLSLFPGSFELS-------------------R 147
                +S SFST F+F  +S + GD  L   + P S +LS                   +
Sbjct: 87  KGKQRNSRSFSTHFSFSSMSNEIGDDVLAFVMVPSSLDLSLFGKKDNSSSALGFLSQYAK 146

Query: 148 EKWIHAIEF----------------VSANVSNLSGGYLKTERGVLVPTIGGKLTSWVDFD 207
            + + A+EF                 SA + NLS        G L+   G  L+  ++++
Sbjct: 147 NETVVAVEFGISRTGNSARILVGRPESAEIRNLS------FVGDLMMDNGRTLSCMIEYE 206

Query: 208 SSSKMVEIRLSKFGDSRPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQWSR-VFSWR 267
           +SSK + +R  K G  + +DP F++ +DLA   +G EV VGLSS N   S  +  + SWR
Sbjct: 207 ASSKRMMVRFRKSGSVKLFDPFFSFSVDLAKLWKGGEVTVGLSSANGNSSSKAHFLHSWR 266

Query: 268 FGLRN-IPKGMHSLPVDPRRRSEKQGEELQKNHLLPLTIFAGLIFATGCGALMAFVVLFM 294
           F +R+  P  MHS+P++P   S K+ E  +        +   LIF   CGAL A + L++
Sbjct: 267 FEIRHPPPMWMHSVPLEPNEVS-KEEENGRGRSECTRKMLGALIFGAACGALGALLGLYL 324

[Close]

BLAST of MS003421 vs. TAIR 10
Match: AT3G54080.1 (Concanavalin A-like lectin family protein )

HSP 1 Score: 60.1 bits (144), Expect = 3.8e-09
Identity = 72/323 (22.29%), Postives = 132/323 (40.87%), Query Frame = 0


Query: 28  SSFTLPTLSNNPNFDPH-IALIGDAAVVHADADADDSFVKLTRPVASSFGLVLNAKPLRL 87
           SSF+  +   N +F+    AL GDA +V        S ++LT  V+   G V+  KP+  
Sbjct: 31  SSFSFTSSGKNASFESEDFALYGDAKLVDG-----GSSIQLTDSVSHGGGRVIYKKPIES 90

Query: 88  HDS------SSFSTQFAFWVSPDNGDGLVLSLFP-------GSFELSREKWIHAIEFVSA 147
            ++      + FST F+F +SP  G  L   +FP         F++  + +    +   +
Sbjct: 91  MNNIKFEYFTGFSTFFSFSISPSRGGRLGFVVFPVNETFDHSLFQVKFDTFDSFTQIGDS 150

Query: 148 NVSNLSGGYLKTER------GVLVPTIGGKLTSWVDFDSSSKMVEIRLSKFGDSRPYDPS 207
           NV+ +  G   +ER        L  T    L +W+++ +  K +E+RLSK        P 
Sbjct: 151 NVAVIVDGATVSERIRNFTIANLEKTEKVLLYAWINYQAGGKFLEVRLSKSKSFESVLPL 210

Query: 208 FAYPIDLASKCEGEEVF-VGLSSWNSKPSQWSRVFSWRFGLRNIPKGMHSLPV----DPR 267
               IDL+     E+ F V ++S++   +    + SW   +R+        PV      R
Sbjct: 211 MFDQIDLSQMLRDEDEFMVAVNSYSGNVN----LHSWSLEVRHSEYEHSWAPVLLEEQLR 270

Query: 268 RRSEKQGEELQKNHLLP--LTIFAGLIFATGCGALMAFVVLFMWVIAANRNAIFAAEPQ- 320
           +  + + EE  K         +    +   G   L+ F ++ ++      N     + + 
Sbjct: 271 KEEQLRKEEAAKKRTSDRMWEVVTCFVMTFGSTGLVFFAMMHIYAAFKRNNLAMVMQEEC 330

[Close]

BLAST of MS003421 vs. TAIR 10
Match: AT4G02420.1 (Concanavalin A-like lectin protein kinase family protein )

HSP 1 Score: 44.7 bits (104), Expect = 1.7e-04
Identity = 24/84 (28.57%), Postives = 42/84 (50.00%), Query Frame = 0


Query: 157 KLTSWVDFDSSSKMVEIRLSKFGDSRPYDPSFAYPIDLASKCEGEEVFVGLSSWNSKPSQ 216
           ++  WVDFD  + ++++ ++ FG+ +P  P  +   DL+S    +++FVG SS       
Sbjct: 193 RMQVWVDFDGPTHLIDVTMAPFGEVKPRKPLVSIVRDLSSVLL-QDMFVGFSSATGNIVS 252

Query: 217 WSRVFSWRFGLRN--IPKGMHSLP 239
              V  W FG+     P  +  LP
Sbjct: 253 EIFVLGWSFGVNGEAQPLALSKLP 275

The following BLAST results are available for this feature:

BLAST of MS003421 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022133454.1	4.5e-177	99.05	uncharacterized protein LOC111006026 [Momordica charantia]	[more]
XP_023553507.1	4.9e-123	72.59	uncharacterized protein LOC111810901 [Cucurbita pepo subsp. pepo] >XP_023553516....	[more]
XP_022961282.1	6.3e-123	73.35	uncharacterized protein LOC111461824 [Cucurbita moschata]	[more]
XP_038885984.1	1.3e-112	68.97	uncharacterized protein LOC120076289 [Benincasa hispida]	[more]
XP_004138574.2	2.1e-110	66.15	uncharacterized protein LOC101219233 [Cucumis sativus] >KGN45764.1 hypothetical ...	[more]

BLAST of MS003421 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS003421 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BW10	2.2e-177	99.05	uncharacterized protein LOC111006026 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1H9S2	3.1e-123	73.35	uncharacterized protein LOC111461824 OS=Cucurbita moschata OX=3662 GN=LOC1114618...	[more]
A0A0A0KA99	1.0e-110	66.15	Lectin_legB domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_6G009430...	[more]
A0A5A7TDM9	9.6e-109	66.14	L-type lectin-domain containing receptor kinase VIII.1-like OS=Cucumis melo var....	[more]
A0A1S3B3V6	9.6e-109	66.14	uncharacterized protein LOC103485717 OS=Cucumis melo OX=3656 GN=LOC103485717 PE=...	[more]

BLAST of MS003421 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G01090.1	2.8e-28	29.91	Concanavalin A-like lectin family protein	[more]
AT3G09035.1	1.5e-26	30.97	Concanavalin A-like lectin family protein	[more]
AT3G54080.1	3.8e-09	22.29	Concanavalin A-like lectin family protein	[more]
AT4G02420.1	1.7e-04	28.57	Concanavalin A-like lectin protein kinase family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	GENE3D	2.60.120.200		coord: 28..227 e-value: 5.9E-20 score: 73.9
None	No IPR available	PANTHER	PTHR32401:SF15	LEGUME LECTIN BETA DOMAIN PROTEIN	coord: 13..319
None	No IPR available	PANTHER	PTHR32401	CONCANAVALIN A-LIKE LECTIN FAMILY PROTEIN	coord: 13..319
IPR001220	Legume lectin domain	PFAM	PF00139	Lectin_legB	coord: 155..231 e-value: 1.1E-10 score: 41.5
IPR013320	Concanavalin A-like lectin/glucanase domain superfamily	SUPERFAMILY	49899	Concanavalin A-like lectins/glucanases	coord: 28..230

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003421.1	MS003421.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
molecular_function	GO:0030246	carbohydrate binding