MS003414 (gene) Bitter gourd (TR) v1

Overview


Name	MS003414
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	GATA type zinc finger transcription factor family protein
Location	scaffold234: 2733891 .. 2735560 (+)
RNA-Seq Expression	MS003414
Synteny	MS003414

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTCTTTCACTGGCACACTAATAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAGTTATCTATCATAAGTCTTGCTTCAAATGCACCCATTGCAAAGGAACTCTAAAGGTATATTGCACTTTGTTTATAAGATTTCTTAATCACCTCTAATCTCAAAAGTTTATGTTGAGAAGCTATGGTGCATTTTATTGTTTTATATGTATTCTTAACATAAGATCCGATGAGTGACTATTATATTAATTTGGAAGGAAGGAGATGACGTTATTGGAGTTTGAGTTCAGAAGCTCTGATACCGTATTAAATTACCACTTAATCCAAAAACACTTAAGTTGATAAGTTATGGTCTATTTAATTATTTATACTGTATTCTTAACAAAGATACATCTATCTTGAGTTTTTGCTTTCTGCCCAATTTACAGGGAATATAATGTATCTTGCCAAACTATTTGTAAAGGATGTTTAAAATTTGGTATCAACTTGTGTCTCAAGTGTCCATCTGCTGGTATATCACAAGTAAACACAACAAAGTATAGGAGTTACATCAAAGGTTTCAAATTATGGTTACAATTGGGACATGGCAATTAAACAATAAATAGGAGCTAAAAAATCTAATTTAACGACTTTCGGTCTTGTACCGGATGATTGCGAGTTTTTCTGGAAGGATTGAAAGGTTGTTTTTGTTATGAAGATTGGAATCTATCTTACTGTTTGACCTTGTTCTTTGCTTGCCTTCAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACAGGAAACTTCAACAAGAACTTCCAATCACGTACGTTCTTGTCTTCTTTCCGGAAAACTTGATGTTTCACTTCACAAAAAATTTTGCTTTATGTTTAATTGTTTTTGAGTTTTGTTTTCAACAGCTGCAAAGTCAGCCGACAAGTTAACCCCAGAGCTGGTAATTTCCTGCTGTAATTTGTTATGATTCGATCTTGAGGAAATTTCTCCACAAGGACATAAAATTATGCTGTGTATTGCAACTGATTCTTGTAACCAATAATTGGTTTCAGACTAGATCACCTAGCAAAGCTGCTGGCATGTTTTCTGGGACTCAAGACAAATGTACTACTTGTGGTAAAACTGTTTATCCACTGGAGAAGGTAAACCACTTAGTGAGATCTTGACAAATAACAAATTTTTGCTCGATGGATATATTTGAAACGGTTATGAAAGTTCAAGGATAGTATTGAAACTTTTGAAAGGATAGAGGTATTTTAGATATCAGTTTTGGCGTGCGCTACCATTTTTCCAACAACCCCACATCAAAAGAGAAAAAAAAATGCGTCAAATCCATGGCTATTGATTCATAAATTTGATATTTGCAAAGTGTAGAGCATTTTAGATGAATTCGTTATTACAAATACTTGCAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTGCTGTTTCAAGTGCTCTCATGGAGGGTGTGCTATATCCCCATCAAATTATGCAGCTCTAGAGGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTACCGCTGCCTCTGTTCCCGAAGCT

mRNA sequence

ATGTCTTTCACTGGCACACTAATAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAGTTATCTATCATAAGTCTTGCTTCAAATGCACCCATTGCAAAGGAACTCTAAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACAGGAAACTTCAACAAGAACTTCCAATCACCTGCAAAGTCAGCCGACAAGTTAACCCCAGAGCTGACTAGATCACCTAGCAAAGCTGCTGGCATGTTTTCTGGGACTCAAGACAAATGTACTACTTGTGGTAAAACTGTTTATCCACTGGAGAAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTGCTGTTTCAAGTGCTCTCATGGAGGGTGTGCTATATCCCCATCAAATTATGCAGCTCTAGAGGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTACCGCTGCCTCTGTTCCCGAAGCT

Coding sequence (CDS)

ATGTCTTTCACTGGCACACTAATAAAGTGCAAGGCCTGTGAGAAGACTGTCTACCCTGTGGAGCAGCTCTCTGCCGATGGAGTTATCTATCATAAGTCTTGCTTCAAATGCACCCATTGCAAAGGAACTCTAAAGCTGAGCAATTATTCTTCAATGGAAGGTGTTCTGTACTGCAAGCCTCATTTCGAGCAGCTCTTCAAAGAGACAGGAAACTTCAACAAGAACTTCCAATCACCTGCAAAGTCAGCCGACAAGTTAACCCCAGAGCTGACTAGATCACCTAGCAAAGCTGCTGGCATGTTTTCTGGGACTCAAGACAAATGTACTACTTGTGGTAAAACTGTTTATCCACTGGAGAAGGTAACAGTTGAAAGCCAATGCTTTCACAAGTGCTGTTTCAAGTGCTCTCATGGAGGGTGTGCTATATCCCCATCAAATTATGCAGCTCTAGAGGGTATTCTATATTGCAAACACCACTTCTCCCAGCTTTTCAAGGAAAAGGGAAGCTACAACCACCTGATCAAGTCTGCATCCATGAAGCGTACCGCTGCCTCTGTTCCCGAAGCT

Protein sequence

MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKPHFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEKVTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMKRTAASVPEA

Homology

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BLAST of MS003414 vs. NCBI nr
Match: XP_022134482.1 (LIM domain-containing protein WLIM2b-like [Momordica charantia])

HSP 1 Score: 401.4 bits (1030), Expect = 4.4e-108
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           RTAASVPEA
Sbjct: 181 RTAASVPEA 189

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BLAST of MS003414 vs. NCBI nr
Match: XP_038884117.1 (LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM domain-containing protein WLIM2b [Benincasa hispida])

HSP 1 Score: 376.3 bits (965), Expect = 1.5e-100
Identity = 177/189 (93.65%), Postives = 182/189 (96.30%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVYPVEQLSADG+ YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYPVEQLSADGISYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

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BLAST of MS003414 vs. NCBI nr
Match: XP_004138434.1 (LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_008441431.1 PREDICTED: LIM domain-containing protein WLIM2b [Cucumis melo] >XP_011656401.1 LIM domain-containing protein WLIM2b [Cucumis sativus] >KGN45769.1 hypothetical protein Csa_005194 [Cucumis sativus])

HSP 1 Score: 373.6 bits (958), Expect = 9.9e-100
Identity = 176/189 (93.12%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

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BLAST of MS003414 vs. NCBI nr
Match: XP_010067487.1 (LIM domain-containing protein WLIM2b [Eucalyptus grandis] >XP_010067488.1 LIM domain-containing protein WLIM2b [Eucalyptus grandis] >XP_010067489.1 LIM domain-containing protein WLIM2b [Eucalyptus grandis] >KCW65631.1 hypothetical protein EUGRSUZ_G03023 [Eucalyptus grandis])

HSP 1 Score: 373.6 bits (958), Expect = 9.9e-100
Identity = 174/189 (92.06%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT +KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQVKCKACEKTVYPVEQLSADGVAYHKSCFKCSHCKGTLKLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPEL RSPSKAAGMFSGTQDKC TCGKT YPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELARSPSKAAGMFSGTQDKCATCGKTAYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC I+PSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R AAS+PEA
Sbjct: 181 RAAASIPEA 189

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BLAST of MS003414 vs. NCBI nr
Match: XP_023550254.1 (LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo])

HSP 1 Score: 372.9 bits (956), Expect = 1.7e-99
Identity = 176/189 (93.12%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLS DGV YHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

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BLAST of MS003414 vs. ExPASy Swiss-Prot
Match: Q9M047 (LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B PE=1 SV=1)

HSP 1 Score: 337.4 bits (864), Expect = 1.0e-91
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

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BLAST of MS003414 vs. ExPASy Swiss-Prot
Match: O04193 (LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A PE=1 SV=1)

HSP 1 Score: 329.3 bits (843), Expect = 2.8e-89
Identity = 152/190 (80.00%), Postives = 169/190 (88.95%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KC+ACEKTVYPVE LSADG+ YHK+CFKC+HCK  L+LSNYSSMEGV+YC+P
Sbjct: 1   MSFTGTQQKCRACEKTVYPVELLSADGISYHKACFKCSHCKSRLQLSNYSSMEGVVYCRP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKS-ADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLE 120
           HFEQLFKE+G+F+KNFQSPAK   DK TPEL R+PS+ AGMFSGTQDKC TC KTVYP+E
Sbjct: 61  HFEQLFKESGSFSKNFQSPAKPLTDKPTPELNRTPSRLAGMFSGTQDKCATCTKTVYPIE 120

Query: 121 KVTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASM 180
           KVTVESQC+HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+
Sbjct: 121 KVTVESQCYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASI 180

Query: 181 KRTAASVPEA 190
           KR  A+   A
Sbjct: 181 KRATAAATAA 190

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BLAST of MS003414 vs. ExPASy Swiss-Prot
Match: Q1ECF5 (LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 272.3 bits (695), Expect = 4.1e-72
Identity = 119/184 (64.67%), Postives = 154/184 (83.70%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTL KC  C+KTVY V+ LS +G+ YHKSCF+CTHCKGTL++SNYSSM+GVLYCK 
Sbjct: 1   MSFTGTLDKCNVCDKTVYVVDMLSIEGMPYHKSCFRCTHCKGTLQMSNYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GNF+KNFQ P K+     PELTR+PSK + +F GTQDKC  C KTVYPLEK
Sbjct: 61  HFEQLFKESGNFSKNFQ-PGKTE---KPELTRTPSKISSIFCGTQDKCAACEKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           + +E +CFHK CF+C+HGGC ++ S+YA+L+ +LYC+HHF+QLF EKG+Y H++++A+ +
Sbjct: 121 IQMEGECFHKTCFRCAHGGCTLTHSSYASLDSVLYCRHHFNQLFMEKGNYAHVLQAANHR 180

Query: 181 RTAA 185
           RTA+
Sbjct: 181 RTAS 180

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BLAST of MS003414 vs. ExPASy Swiss-Prot
Match: O80839 (LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A PE=1 SV=1)

HSP 1 Score: 267.7 bits (683), Expect = 1.0e-70
Identity = 121/185 (65.41%), Postives = 151/185 (81.62%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTL KCKAC+KTVY ++ L+ +G  YHKSCF+CTHCKGTL +SNYSSM+GVLYCKP
Sbjct: 1   MSFTGTLDKCKACDKTVYVMDLLTLEGNTYHKSCFRCTHCKGTLVISNYSSMDGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GN++KNFQ  A   +K    LTR+PSK +  FSGTQDKC TC KTVYPLEK
Sbjct: 61  HFEQLFKESGNYSKNFQ--AGKTEKPNDHLTRTPSKLSSFFSGTQDKCATCKKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VT+E + +HK CF+C+H GC ++ S+YA+L G+LYCK HF+QLF EKGSYNH+ ++A+  
Sbjct: 121 VTMEGESYHKTCFRCTHSGCPLTHSSYASLNGVLYCKVHFNQLFLEKGSYNHVHQAAANH 180

Query: 181 RTAAS 186
           R +AS
Sbjct: 181 RRSAS 183

[Close]

BLAST of MS003414 vs. ExPASy Swiss-Prot
Match: Q7F9R9 (LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN=PLIM2B PE=1 SV=1)

HSP 1 Score: 255.4 bits (651), Expect = 5.1e-67
Identity = 120/189 (63.49%), Postives = 144/189 (76.19%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KC AC+KTV+ ++ L+ADGV YHK+CFKC+HCKG L + +YSSM+GVLYCK 
Sbjct: 1   MSFTGTQDKCTACDKTVHFIDLLTADGVPYHKTCFKCSHCKGILSMCSYSSMDGVLYCKT 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETG+F+K F    +S DK   EL R+PSK    FSGTQDKC  C KTVYPLEK
Sbjct: 61  HFEQLFKETGSFSKKFAPGCRSTDK---ELARAPSKICSAFSGTQDKCAACQKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHL-IKSASM 180
           +T+E + +HK CFKCSHGGC ++ S+YAAL G+LYCK HF QLF EKGSYNH+  KS S 
Sbjct: 121 LTLEGESYHKSCFKCSHGGCILTTSSYAALNGVLYCKIHFGQLFMEKGSYNHMKKKSESQ 180

Query: 181 KRTAASVPE 189
           +     VPE
Sbjct: 181 EVLPEVVPE 186

[Close]

BLAST of MS003414 vs. ExPASy TrEMBL
Match: A0A6J1BZQ6 (LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC111006716 PE=4 SV=1)

HSP 1 Score: 401.4 bits (1030), Expect = 2.1e-108
Identity = 189/189 (100.00%), Postives = 189/189 (100.00%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           RTAASVPEA
Sbjct: 181 RTAASVPEA 189

[Close]

BLAST of MS003414 vs. ExPASy TrEMBL
Match: A0A1S3B3E4 (LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.8e-100
Identity = 176/189 (93.12%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of MS003414 vs. ExPASy TrEMBL
Match: A0A059BIA9 (Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G03023 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.8e-100
Identity = 174/189 (92.06%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT +KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQVKCKACEKTVYPVEQLSADGVAYHKSCFKCSHCKGTLKLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSADKLTPEL RSPSKAAGMFSGTQDKC TCGKT YPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELARSPSKAAGMFSGTQDKCATCGKTAYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC I+PSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCPITPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R AAS+PEA
Sbjct: 181 RAAASIPEA 189

[Close]

BLAST of MS003414 vs. ExPASy TrEMBL
Match: A0A0A0KAA4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1)

HSP 1 Score: 373.6 bits (958), Expect = 4.8e-100
Identity = 176/189 (93.12%), Postives = 181/189 (95.77%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLSADGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSADGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKETGNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKETGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGCA+SPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCALSPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R+AA VPEA
Sbjct: 181 RSAAPVPEA 189

[Close]

BLAST of MS003414 vs. ExPASy TrEMBL
Match: A0A6J1K140 (LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197 PE=4 SV=1)

HSP 1 Score: 371.3 bits (952), Expect = 2.4e-99
Identity = 175/189 (92.59%), Postives = 180/189 (95.24%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSF GT  KCKACEKTVYPVEQLS DGV YHKSCFKC+HCKGTLKLSNYSSMEGVLYCKP
Sbjct: 1   MSFIGTQQKCKACEKTVYPVEQLSVDGVSYHKSCFKCSHCKGTLKLSNYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+GNFNKNFQSPAKSA+KLTPELTRSPSKAAGMFSGTQDKC TCGKTVYPLEK
Sbjct: 61  HFEQLFKESGNFNKNFQSPAKSAEKLTPELTRSPSKAAGMFSGTQDKCATCGKTVYPLEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC+ISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK
Sbjct: 121 VTVESQSYHKSCFKCSHGGCSISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180

Query: 181 RTAASVPEA 190
           R AASVPEA
Sbjct: 181 RPAASVPEA 189

[Close]

BLAST of MS003414 vs. TAIR 10
Match: AT3G55770.1 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MS003414 vs. TAIR 10
Match: AT3G55770.2 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MS003414 vs. TAIR 10
Match: AT3G55770.3 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MS003414 vs. TAIR 10
Match: AT3G55770.4 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

[Close]

BLAST of MS003414 vs. TAIR 10
Match: AT3G55770.5 (GATA type zinc finger transcription factor family protein )

HSP 1 Score: 337.4 bits (864), Expect = 7.3e-93
Identity = 158/189 (83.60%), Postives = 171/189 (90.48%), Query Frame = 0


Query: 1   MSFTGTLIKCKACEKTVYPVEQLSADGVIYHKSCFKCTHCKGTLKLSNYSSMEGVLYCKP 60
           MSFTGT  KCKACEKTVY VE LSADGV YHKSCFKCTHCK  L+LS+YSSMEGVLYCKP
Sbjct: 1   MSFTGTQQKCKACEKTVYAVELLSADGVGYHKSCFKCTHCKSRLQLSSYSSMEGVLYCKP 60

Query: 61  HFEQLFKETGNFNKNFQSPAKSADKLTPELTRSPSKAAGMFSGTQDKCTTCGKTVYPLEK 120
           HFEQLFKE+G+FNKNFQSPAKSADK TPELTR+PS+ AG FSGTQ+KC TC KTVYP+EK
Sbjct: 61  HFEQLFKESGSFNKNFQSPAKSADKSTPELTRTPSRVAGRFSGTQEKCATCSKTVYPIEK 120

Query: 121 VTVESQCFHKCCFKCSHGGCAISPSNYAALEGILYCKHHFSQLFKEKGSYNHLIKSASMK 180
           VTVESQ +HK CFKCSHGGC ISPSNYAALEGILYCKHHF+QLFKEKGSYNHLIKSAS+K
Sbjct: 121 VTVESQTYHKSCFKCSHGGCPISPSNYAALEGILYCKHHFAQLFKEKGSYNHLIKSASIK 180

Query: 181 RTAASVPEA 190
           R+AA+   A
Sbjct: 181 RSAAAAVAA 189

The following BLAST results are available for this feature:

BLAST of MS003414 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134482.1	4.4e-108	100.00	LIM domain-containing protein WLIM2b-like [Momordica charantia]	[more]
XP_038884117.1	1.5e-100	93.65	LIM domain-containing protein WLIM2b [Benincasa hispida] >XP_038884118.1 LIM dom...	[more]
XP_004138434.1	9.9e-100	93.12	LIM domain-containing protein WLIM2b [Cucumis sativus] >XP_008441430.1 PREDICTED...	[more]
XP_010067487.1	9.9e-100	92.06	LIM domain-containing protein WLIM2b [Eucalyptus grandis] >XP_010067488.1 LIM do...	[more]
XP_023550254.1	1.7e-99	93.12	LIM domain-containing protein WLIM2b [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS003414 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M047	1.0e-91	83.60	LIM domain-containing protein WLIM2b OS=Arabidopsis thaliana OX=3702 GN=WLIM2B P...	[more]
O04193	2.8e-89	80.00	LIM domain-containing protein WLIM2a OS=Arabidopsis thaliana OX=3702 GN=WLIN2A P...	[more]
Q1ECF5	4.1e-72	64.67	LIM domain-containing protein PLIM2b OS=Arabidopsis thaliana OX=3702 GN=PLIM2B P...	[more]
O80839	1.0e-70	65.41	LIM domain-containing protein PLIM2a OS=Arabidopsis thaliana OX=3702 GN=PLIM2A P...	[more]
Q7F9R9	5.1e-67	63.49	LIM domain-containing protein PLIM2b OS=Oryza sativa subsp. japonica OX=39947 GN...	[more]

BLAST of MS003414 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZQ6	2.1e-108	100.00	LIM domain-containing protein WLIM2b-like OS=Momordica charantia OX=3673 GN=LOC1...	[more]
A0A1S3B3E4	4.8e-100	93.12	LIM domain-containing protein WLIM2b OS=Cucumis melo OX=3656 GN=LOC103485550 PE=...	[more]
A0A059BIA9	4.8e-100	92.06	Uncharacterized protein OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_G03023 PE=4 SV...	[more]
A0A0A0KAA4	4.8e-100	93.12	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G009480 PE=4 SV=1	[more]
A0A6J1K140	2.4e-99	92.59	LIM domain-containing protein WLIM2b OS=Cucurbita maxima OX=3661 GN=LOC111489197...	[more]

BLAST of MS003414 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G55770.1	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.2	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.3	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.4	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]
AT3G55770.5	7.3e-93	83.60	GATA type zinc finger transcription factor family protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR001781	Zinc finger, LIM-type	SMART	SM00132	lim_4	coord: 9..61 e-value: 8.5E-13 score: 58.5 coord: 107..159 e-value: 5.7E-8 score: 42.5
IPR001781	Zinc finger, LIM-type	PFAM	PF00412	LIM	coord: 108..163 e-value: 4.4E-8 score: 33.2 coord: 10..65 e-value: 1.0E-11 score: 44.8
IPR001781	Zinc finger, LIM-type	PROSITE	PS00478	LIM_DOMAIN_1	coord: 10..44
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 106..166 score: 11.8009
IPR001781	Zinc finger, LIM-type	PROSITE	PS50023	LIM_DOMAIN_2	coord: 8..68 score: 13.4542
None	No IPR available	GENE3D	2.10.110.10	Cysteine Rich Protein	coord: 102..172 e-value: 2.2E-17 score: 65.0 coord: 8..74 e-value: 1.6E-20 score: 75.0
None	No IPR available	PANTHER	PTHR24206:SF94	LIM DOMAIN-CONTAINING PROTEIN WLIM2B	coord: 1..189
None	No IPR available	PANTHER	PTHR24206	OS06G0237300 PROTEIN	coord: 1..189
None	No IPR available	CDD	cd09440	LIM1_SF3	coord: 6..68 e-value: 1.72749E-39 score: 127.196
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 134..173
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 36..76
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 100..133
None	No IPR available	SUPERFAMILY	57716	Glucocorticoid receptor-like (DNA-binding domain)	coord: 5..35

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003414.1	MS003414.1	mRNA