MS003381 (gene) Bitter gourd (TR) v1

Overview


Name	MS003381
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Lipoyl-binding domain-containing protein
Location	scaffold234: 2455939 .. 2458401 (-)
RNA-Seq Expression	MS003381
Synteny	MS003381

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

GGTTCACGTCTCCAGTTAATTGAGAAACCTTGTAAAATTTCTGTGTCTAATGTTAATACGTCGTGCATTCAAGGACTATCAGTTTTTGGTAAGCCCGCCCATACTCCAACAAACCAGAAGAGAACAGTGGTATTGTGCACAAAGACGCCTGAAGTTACTGAAACTGCAAAACCCAGTGGTAAGATTTATTGTAGTTGAAGTTTCATTATGGTTGTGTTCTGTGAGTAAATTCTGTTCTTCCTCTGACTTGACAGGCGCTAGCTGTTCTTATCCATTATAGTTAATTTATCACAATAAGGTTTGGGCTAAATGTTGTTTGTAACTTGTGTAGTTTAGGTGCCAAAAGTAGACTAAATCTTAATTTCTACAACATGGATCAATAAGTTTTCCTGCAAATATTATGCTTTCTAATGCTAGATACTGGTGTGGCAATTTGTTTAATCATATGCATCCTATTCGTTAGTTTATAAACTTATACCGTTAGGCTCAGTTGGGTAAAATAGCGTCCATATTTCTATTGCATTAAGGAAAAAACTAGAGGTATAAACTGGTTTTAAGAACAATTATAGGCAGGAAATTGAAGTCATGCTGTCTCCCCCATCCAAGACTAGATTCTCCCTAACAACCCTTGTCACTTCCCTCCCCTCTTGTACAGAATTCTCTGTCTCTAACTAGCTCCTTATTCTAGGGCTCGGTCTCATTCTAAGAAATCCATGCAGGCAAATACAAAATTGCCCCTCCAAAATTAACCTGGCCTTACTAAATATTCATATACTTCTTTGTCAGGTATGTCAAACGCACCAAGTGCTAAGGACGAACTCCTACTTAAGTAGAATGAAACCATACCCTTACTGAAGATGACTTTAATAGTAAATCATGTGTTTCATCCTTGGTGAACATCTTGGTCTTTTAGTTGTAATTTTACTATTCTTCTTTTAACTACAACTATTGATGGTTCTGTATATTTTGCACTGAAAACATATATAGGCATTGATCAACTATTCAGGTAGATTCTTTATTGGCTTTTAAACCTTCAACTTGATATCAACAGATAGCGTACTCCAAAGTTCAGTACAGAAGAAGCCTGCAACAAATGCAACATTTCCTAATGGATTTGAAGTGAGTTCAAATTTAATCTTGTGTTCCCGTTTTTTTCCTAATGAATAGCAGACAGTTTTCATTGGGTTTCCATTAGTAACCAGTAGAACTTCATCTGAAACTATAATGACAAGAAACTTGCTGAAATTCATATGTTATGCACTTCTCCTTCATGGTTTATATACACATGTGATGAACCTTGCAATATGGTACTGAATTAGAGTGTCGTGGCCATCTGCTGAATGGAAAAGGCCTTGGAATTATGCCCATTATATCAAAAAAGGGTTTTCTTTTTCTTGCTGAGTGTATTTGTCAGTAATTTCCGAAGGACATTCTTAGAGTTTGTGAAGTTCGAATATTCTTTTCCAGCAGTTGGTTAGTTAAATGTTGCAGTTGAAATCTGATGATATCATTTAAAATTTGTTTCTTAATAGTAATATTGTCTTTGAACAATTACATTCGATCATTCCAAATCAAACTGACTTATCTACTGTTTGAAATCATCAGGCATTGGTACTGGAGGTCTGTGATGAGACAGAGATCGCTGAACTAAAACTAAAGGTGTAGTACAATGCTTTTAAATATTTAGACAGCCATGCAGTGCCAAGAGTTTTTTCAGTTTATCTTTCACCTGATATCATAATTTTCAAAAGAATGAAAAGAACACGAAGCGGAGTTGATGAGTCTTCTTCTTCTTCCTCAGCATCGCTCCTTCTTCAATTCCCACTTACAGTATACCAATCTAAAAAAAAGAATGAAAAGAACACTGTACAAGAGACTCTTAGAATGACATTTACATTACATGGTTGTTCAACCAATGAAAAAACAGATGCATTTTGAATTGGTTGAATTCTCTTGGACTAAGTTTCTGGGACATAAAGATGTAGTTTATTCATTTTTTACTTGTATCGATTTGTCTTCTGTTATCTATTATAGGTTGGAGAGTTTGAAATGCATTTGAAGCGTAATATTGGAGTCGTAAAAGCTCCCATGTCTGCCATTTCTCCAACAATACCCCCACCAATTCCATCTAAACCCATGGTTGAGTCTGCTCCTACTGCACCTGCACCTCCAAAATCTTCTCCAGAGAAAAAAACTCCTTTCGCCAATTTTCCCTTTGAGAAGTCATCAAAGCTAGCAGCTCTGGAGGCATCTGGATCAAAAGGATATATTCTAGTATCTTCTCCTACGGTATGTAATGCATTAATGTGTACGGTTATGCTTCATCTAAAAAGAAAGAAGAGGAAAATCTGAGAAACCCTGGCATTATTTTAACACAAATTTTGCTTGTCCTTTCACTAGGTCGGAACATTCCGAAGGGGCAGGACAGTTAAAGGAAAGAAGCAGCCTCCTATCTGCAAAGAG

mRNA sequence

GGTTCACGTCTCCAGTTAATTGAGAAACCTTGTAAAATTTCTGTGTCTAATGTTAATACGTCGTGCATTCAAGGACTATCAGTTTTTGGTAAGCCCGCCCATACTCCAACAAACCAGAAGAGAACAGTGGTATTGTGCACAAAGACGCCTGAAGTTACTGAAACTGCAAAACCCAATAGCGTACTCCAAAGTTCAGTACAGAAGAAGCCTGCAACAAATGCAACATTTCCTAATGGATTTGAAGCATTGGTACTGGAGGTCTGTGATGAGACAGAGATCGCTGAACTAAAACTAAAGGTTGGAGAGTTTGAAATGCATTTGAAGCGTAATATTGGAGTCGTAAAAGCTCCCATGTCTGCCATTTCTCCAACAATACCCCCACCAATTCCATCTAAACCCATGGTTGAGTCTGCTCCTACTGCACCTGCACCTCCAAAATCTTCTCCAGAGAAAAAAACTCCTTTCGCCAATTTTCCCTTTGAGAAGTCATCAAAGCTAGCAGCTCTGGAGGCATCTGGATCAAAAGGATATATTCTAGTATCTTCTCCTACGGTCGGAACATTCCGAAGGGGCAGGACAGTTAAAGGAAAGAAGCAGCCTCCTATCTGCAAAGAG

Coding sequence (CDS)

GGTTCACGTCTCCAGTTAATTGAGAAACCTTGTAAAATTTCTGTGTCTAATGTTAATACGTCGTGCATTCAAGGACTATCAGTTTTTGGTAAGCCCGCCCATACTCCAACAAACCAGAAGAGAACAGTGGTATTGTGCACAAAGACGCCTGAAGTTACTGAAACTGCAAAACCCAATAGCGTACTCCAAAGTTCAGTACAGAAGAAGCCTGCAACAAATGCAACATTTCCTAATGGATTTGAAGCATTGGTACTGGAGGTCTGTGATGAGACAGAGATCGCTGAACTAAAACTAAAGGTTGGAGAGTTTGAAATGCATTTGAAGCGTAATATTGGAGTCGTAAAAGCTCCCATGTCTGCCATTTCTCCAACAATACCCCCACCAATTCCATCTAAACCCATGGTTGAGTCTGCTCCTACTGCACCTGCACCTCCAAAATCTTCTCCAGAGAAAAAAACTCCTTTCGCCAATTTTCCCTTTGAGAAGTCATCAAAGCTAGCAGCTCTGGAGGCATCTGGATCAAAAGGATATATTCTAGTATCTTCTCCTACGGTCGGAACATTCCGAAGGGGCAGGACAGTTAAAGGAAAGAAGCAGCCTCCTATCTGCAAAGAG

Protein sequence

GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPNSVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMSAISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYILVSSPTVGTFRRGRTVKGKKQPPICKE

Homology

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BLAST of MS003381 vs. NCBI nr
Match: XP_022134353.1 (uncharacterized protein LOC111006634 [Momordica charantia])

HSP 1 Score: 389.4 bits (999), Expect = 1.9e-104
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKP-N 60
           GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKP +
Sbjct: 16  GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPSD 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS
Sbjct: 76  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL
Sbjct: 136 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVGTFRRGRTVKGKKQPPICKE
Sbjct: 196 VSSPTVGTFRRGRTVKGKKQPPICKE 221

[Close]

BLAST of MS003381 vs. NCBI nr
Match: XP_038886728.1 (biotin carboxyl carrier protein of acetyl-CoA carboxylase [Benincasa hispida])

HSP 1 Score: 335.9 bits (860), Expect = 2.5e-88
Identity = 175/205 (85.37%), Postives = 183/205 (89.27%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPNS 60
           GSRLQLIEKP K+ VSN N S IQG S+FGKP HT TN KRTVV CTKTPEVTETAKP  
Sbjct: 16  GSRLQLIEKPSKMYVSNTNKSSIQGPSIFGKPIHTLTNLKRTVVSCTKTPEVTETAKPKD 75

Query: 61  VLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMSA 120
            +Q SVQKKPA NATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVV+AP+SA
Sbjct: 76  SVQGSVQKKPAANATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVRAPLSA 135

Query: 121 ISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYILV 180
           ISPT+PPPIPSKPMVESAPT PAPPK S EK TPF N P EKSSKLAALEASGSKGY+LV
Sbjct: 136 ISPTVPPPIPSKPMVESAPTLPAPPKPSSEKTTPFTNVPLEKSSKLAALEASGSKGYVLV 195

Query: 181 SSPTVGTFRRGRTVKGKKQPPICKE 206
           SSPTVG+FRRGRTVKGKKQPPICKE
Sbjct: 196 SSPTVGSFRRGRTVKGKKQPPICKE 220

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BLAST of MS003381 vs. NCBI nr
Match: XP_023549572.1 (uncharacterized protein LOC111808032 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 330.5 bits (846), Expect = 1.0e-86
Identity = 171/206 (83.01%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPN- 60
           GSR+QLIEKP KI +SN N SCIQGLS FGKP H PTNQKRT + CTK P+VTETAKPN 
Sbjct: 16  GSRMQLIEKPSKIYMSNTNKSCIQGLSNFGKPIHVPTNQKRTGLSCTKVPKVTETAKPND 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVL  SV KKPA NATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVV+AP+S
Sbjct: 76  SVLDGSVLKKPAANATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVRAPLS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPTIPPPIPSKPM+ESAPTA APP + PEK TPF N P EKSSK+AALEASGSKGY+L
Sbjct: 136 AISPTIPPPIPSKPMIESAPTASAPPNNLPEKTTPFTNVPLEKSSKIAALEASGSKGYVL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVG+FRRGRT+KGK+QPPICKE
Sbjct: 196 VSSPTVGSFRRGRTIKGKQQPPICKE 221

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BLAST of MS003381 vs. NCBI nr
Match: XP_022993708.1 (uncharacterized protein LOC111489625 [Cucurbita maxima])

HSP 1 Score: 329.7 bits (844), Expect = 1.8e-86
Identity = 172/206 (83.50%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPN- 60
           GSRLQLIEKP K+ +SN N SCIQGLS FGKP H PTNQKRT + CTK P+VTETAKPN 
Sbjct: 16  GSRLQLIEKPSKMYMSNTNKSCIQGLSNFGKPIHIPTNQKRTGLSCTKVPKVTETAKPND 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVL  SV KKPA NATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVV+AP+S
Sbjct: 76  SVLDGSVLKKPAANATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVRAPLS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPTIPPPIPSKPMVESAPTA APP + PEK TPF N P EKSSK+AALEASGSKGY+L
Sbjct: 136 AISPTIPPPIPSKPMVESAPTASAPPNNFPEKTTPFINVPLEKSSKIAALEASGSKGYVL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVG+FRRGRT+KGK+QPPICKE
Sbjct: 196 VSSPTVGSFRRGRTIKGKQQPPICKE 221

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BLAST of MS003381 vs. NCBI nr
Match: KAG6578462.1 (Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subsp. sororia])

HSP 1 Score: 327.4 bits (838), Expect = 8.8e-86
Identity = 171/206 (83.01%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPN- 60
           GSRLQLIEKP KI +SN N SCIQGLS FGKP H  TNQKRT + CTK P+VTETAKPN 
Sbjct: 16  GSRLQLIEKPSKIYMSNTNKSCIQGLSNFGKPIHVSTNQKRTGLSCTKVPKVTETAKPND 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVL  SV KKPA NATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVV+AP+S
Sbjct: 76  SVLDGSVLKKPAANATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVRAPLS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPTIPPPIPSKPM+ESAPTA APP + PEK TPF N P EKSSK+AALEASGSKGY+L
Sbjct: 136 AISPTIPPPIPSKPMIESAPTASAPPNNLPEKITPFTNVPLEKSSKIAALEASGSKGYVL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVG+FRRGRT+KGK+QPPICKE
Sbjct: 196 VSSPTVGSFRRGRTIKGKQQPPICKE 221

[Close]

BLAST of MS003381 vs. ExPASy TrEMBL
Match: A0A6J1C1S0 (uncharacterized protein LOC111006634 OS=Momordica charantia OX=3673 GN=LOC111006634 PE=4 SV=1)

HSP 1 Score: 389.4 bits (999), Expect = 9.1e-105
Identity = 204/206 (99.03%), Postives = 205/206 (99.51%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKP-N 60
           GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKP +
Sbjct: 16  GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPSD 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS
Sbjct: 76  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL
Sbjct: 136 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVGTFRRGRTVKGKKQPPICKE
Sbjct: 196 VSSPTVGTFRRGRTVKGKKQPPICKE 221

[Close]

BLAST of MS003381 vs. ExPASy TrEMBL
Match: A0A6J1K337 (uncharacterized protein LOC111489625 OS=Cucurbita maxima OX=3661 GN=LOC111489625 PE=4 SV=1)

HSP 1 Score: 329.7 bits (844), Expect = 8.6e-87
Identity = 172/206 (83.50%), Postives = 184/206 (89.32%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPN- 60
           GSRLQLIEKP K+ +SN N SCIQGLS FGKP H PTNQKRT + CTK P+VTETAKPN 
Sbjct: 16  GSRLQLIEKPSKMYMSNTNKSCIQGLSNFGKPIHIPTNQKRTGLSCTKVPKVTETAKPND 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVL  SV KKPA NATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVV+AP+S
Sbjct: 76  SVLDGSVLKKPAANATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVRAPLS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPTIPPPIPSKPMVESAPTA APP + PEK TPF N P EKSSK+AALEASGSKGY+L
Sbjct: 136 AISPTIPPPIPSKPMVESAPTASAPPNNFPEKTTPFINVPLEKSSKIAALEASGSKGYVL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVG+FRRGRT+KGK+QPPICKE
Sbjct: 196 VSSPTVGSFRRGRTIKGKQQPPICKE 221

[Close]

BLAST of MS003381 vs. ExPASy TrEMBL
Match: A0A6J1FI89 (uncharacterized protein LOC111445655 OS=Cucurbita moschata OX=3662 GN=LOC111445655 PE=4 SV=1)

HSP 1 Score: 325.9 bits (834), Expect = 1.2e-85
Identity = 170/206 (82.52%), Postives = 182/206 (88.35%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPN- 60
           GSRLQLIEKP KI +SN N SCIQGLS FGKP H  TNQKRT + CTK P+VTETAKPN 
Sbjct: 16  GSRLQLIEKPSKIYMSNTNKSCIQGLSNFGKPIHVSTNQKRTGLSCTKVPKVTETAKPND 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVL  SV KKPA N TFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVV+AP+S
Sbjct: 76  SVLDGSVLKKPAANVTFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVRAPLS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPTIPPPIPSKPM+ESAPTA APP + PEK TPF N P EKSSK+AALEASGSKGY+L
Sbjct: 136 AISPTIPPPIPSKPMIESAPTASAPPNNLPEKITPFTNVPLEKSSKIAALEASGSKGYVL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVG+FRRGRT+KGK+QPPICKE
Sbjct: 196 VSSPTVGSFRRGRTIKGKQQPPICKE 221

[Close]

BLAST of MS003381 vs. ExPASy TrEMBL
Match: A0A6J1E5I5 (uncharacterized protein LOC111430775 OS=Cucurbita moschata OX=3662 GN=LOC111430775 PE=4 SV=1)

HSP 1 Score: 323.6 bits (828), Expect = 6.2e-85
Identity = 169/206 (82.04%), Postives = 183/206 (88.83%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPN- 60
           GSRLQLIEKP KISV N+  SCIQGLSVFGKP + PTNQKRTVVLCTKTP+V+ETAKPN 
Sbjct: 16  GSRLQLIEKPSKISVCNIKKSCIQGLSVFGKPIYIPTNQKRTVVLCTKTPDVSETAKPND 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVL+ S QK PA NATFP+G EALVLEVCDETEIAELKLKVGEFEMHLKRN+GVVKAP+S
Sbjct: 76  SVLRRSAQKTPAANATFPDGLEALVLEVCDETEIAELKLKVGEFEMHLKRNLGVVKAPLS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           AISPT+PPPIPS+PMVESA TAP P K SPEK TPF N P EKS KLAALEASG+KGY+L
Sbjct: 136 AISPTVPPPIPSEPMVESAATAPEPLKPSPEKTTPFTNVPMEKSLKLAALEASGTKGYVL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVG+F  GRT+KGKKQPPICKE
Sbjct: 196 VSSPTVGSFLTGRTIKGKKQPPICKE 221

[Close]

BLAST of MS003381 vs. ExPASy TrEMBL
Match: A0A6J1JUK7 (uncharacterized protein LOC111487634 OS=Cucurbita maxima OX=3661 GN=LOC111487634 PE=4 SV=1)

HSP 1 Score: 316.6 bits (810), Expect = 7.5e-83
Identity = 165/206 (80.10%), Postives = 181/206 (87.86%), Query Frame = 0


Query: 1   GSRLQLIEKPCKISVSNVNTSCIQGLSVFGKPAHTPTNQKRTVVLCTKTPEVTETAKPN- 60
           GSRLQLIEKP KISV N+N SCI+GLSVFGKP + PTNQKRTVVLCTKTP+V+ETAKPN 
Sbjct: 16  GSRLQLIEKPSKISVCNINKSCIRGLSVFGKPIYIPTNQKRTVVLCTKTPDVSETAKPND 75

Query: 61  SVLQSSVQKKPATNATFPNGFEALVLEVCDETEIAELKLKVGEFEMHLKRNIGVVKAPMS 120
           SVL+ S QKKPA N TFP+G EALVLEVCDETEIAELKLKVGEFEMHLKRN+GVVK P+S
Sbjct: 76  SVLRGSAQKKPAANTTFPDGLEALVLEVCDETEIAELKLKVGEFEMHLKRNLGVVKTPLS 135

Query: 121 AISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSKLAALEASGSKGYIL 180
           A+SP +PPPIPS+PMVESA TA  P K SPEK TPF N P EKS KLAALEASG+KGY+L
Sbjct: 136 ALSPIVPPPIPSEPMVESAATALEPLKPSPEKTTPFTNVPVEKSLKLAALEASGTKGYVL 195

Query: 181 VSSPTVGTFRRGRTVKGKKQPPICKE 206
           VSSPTVG+F  GRT+KGKKQPPICKE
Sbjct: 196 VSSPTVGSFLTGRTIKGKKQPPICKE 221

[Close]

BLAST of MS003381 vs. TAIR 10
Match: AT3G56130.1 (biotin/lipoyl attachment domain-containing protein )

HSP 1 Score: 148.7 bits (374), Expect = 5.2e-36
Identity = 91/174 (52.30%), Postives = 116/174 (66.67%), Query Frame = 0


Query: 38  NQKRTVVLCTKTPEVTETAKPNSVLQSSVQ--KKPATNATFPNGFEALVLEVCDETEIAE 97
           N    +VL  K  + + T   +    +SV   KK     TFP   EALV E+CDETE+A 
Sbjct: 48  NSNYRLVLRAKAAKSSTTTISDGSSDASVSDGKKTVRRITFPKEVEALVHEMCDETEVAV 107

Query: 98  LKLKVGEFEMHLKRNIGVV--KAPMSAISPTIPPPIPSKPMVESAPTAPAPPKSSP--EK 157
           L+LKVG+FEM+LKR IG      P++ ISPT+ PPIPS+PM +SA +AP+P ++ P  EK
Sbjct: 108 LQLKVGDFEMNLKRKIGAATNPIPVADISPTVAPPIPSEPMNKSASSAPSPSQAKPSSEK 167

Query: 158 KTPFANFPFEKSSKLAALEASGSKGYILVSSPTVGTFRRGRTVKGKKQPPICKE 206
            +PF N  + K +KLAALEASGS  Y+LV+SP VG F+R RTVKGKKQ P CKE
Sbjct: 168 VSPFKNTSYGKPAKLAALEASGSTNYVLVTSPAVGKFQRSRTVKGKKQSPSCKE 221

[Close]

BLAST of MS003381 vs. TAIR 10
Match: AT3G56130.2 (biotin/lipoyl attachment domain-containing protein )

HSP 1 Score: 139.8 bits (351), Expect = 2.4e-33
Identity = 78/129 (60.47%), Postives = 99/129 (76.74%), Query Frame = 0


Query: 81  EALVLEVCDETEIAELKLKVGEFEMHLKRNIGVV--KAPMSAISPTIPPPIPSKPMVESA 140
           +ALV E+CDETE+A L+LKVG+FEM+LKR IG      P++ ISPT+ PPIPS+PM +SA
Sbjct: 17  QALVHEMCDETEVAVLQLKVGDFEMNLKRKIGAATNPIPVADISPTVAPPIPSEPMNKSA 76

Query: 141 PTAPAPPKSSP--EKKTPFANFPFEKSSKLAALEASGSKGYILVSSPTVGTFRRGRTVKG 200
            +AP+P ++ P  EK +PF N  + K +KLAALEASGS  Y+LV+SP VG F+R RTVKG
Sbjct: 77  SSAPSPSQAKPSSEKVSPFKNTSYGKPAKLAALEASGSTNYVLVTSPAVGKFQRSRTVKG 136

Query: 201 KKQPPICKE 206
           KKQ P CKE
Sbjct: 137 KKQSPSCKE 145

[Close]

BLAST of MS003381 vs. TAIR 10
Match: AT3G56130.4 (biotin/lipoyl attachment domain-containing protein )

HSP 1 Score: 134.8 bits (338), Expect = 7.8e-32
Identity = 87/174 (50.00%), Postives = 110/174 (63.22%), Query Frame = 0


Query: 38  NQKRTVVLCTKTPEVTETAKPNSVLQSSVQ--KKPATNATFPNGFEALVLEVCDETEIAE 97
           N    +VL  K  + + T   +    +SV   KK     TFP   EALV E+CDETE   
Sbjct: 48  NSNYRLVLRAKAAKSSTTTISDGSSDASVSDGKKTVRRITFPKEVEALVHEMCDETE--- 107

Query: 98  LKLKVGEFEMHLKRNIGVV--KAPMSAISPTIPPPIPSKPMVESAPTAPAPPKSSP--EK 157
               VG+FEM+LKR IG      P++ ISPT+ PPIPS+PM +SA +AP+P ++ P  EK
Sbjct: 108 ----VGDFEMNLKRKIGAATNPIPVADISPTVAPPIPSEPMNKSASSAPSPSQAKPSSEK 167

Query: 158 KTPFANFPFEKSSKLAALEASGSKGYILVSSPTVGTFRRGRTVKGKKQPPICKE 206
            +PF N  + K +KLAALEASGS  Y+LV+SP VG F+R RTVKGKKQ P CKE
Sbjct: 168 VSPFKNTSYGKPAKLAALEASGSTNYVLVTSPAVGKFQRSRTVKGKKQSPSCKE 214

[Close]

BLAST of MS003381 vs. TAIR 10
Match: AT3G56130.3 (biotin/lipoyl attachment domain-containing protein )

HSP 1 Score: 115.2 bits (287), Expect = 6.4e-26
Identity = 65/111 (58.56%), Postives = 83/111 (74.77%), Query Frame = 0


Query: 99  KVGEFEMHLKRNIGVV--KAPMSAISPTIPPPIPSKPMVESAPTAPAPPKSSP--EKKTP 158
           +VG+FEM+LKR IG      P++ ISPT+ PPIPS+PM +SA +AP+P ++ P  EK +P
Sbjct: 24  QVGDFEMNLKRKIGAATNPIPVADISPTVAPPIPSEPMNKSASSAPSPSQAKPSSEKVSP 83

Query: 159 FANFPFEKSSKLAALEASGSKGYILVSSPTVGTFRRGRTVKGKKQPPICKE 206
           F N  + K +KLAALEASGS  Y+LV+SP VG F+R RTVKGKKQ P CKE
Sbjct: 84  FKNTSYGKPAKLAALEASGSTNYVLVTSPAVGKFQRSRTVKGKKQSPSCKE 134

[Close]

BLAST of MS003381 vs. TAIR 10
Match: AT3G15690.1 (Single hybrid motif superfamily protein )

HSP 1 Score: 65.5 bits (158), Expect = 5.8e-11
Identity = 56/160 (35.00%), Postives = 81/160 (50.62%), Query Frame = 0


Query: 49  TPEVTETAKPNSVLQSSVQKKPATNATF---PNGFEALVLEVCDETEIAELKLKVGEFEM 108
           T    ET+    V  S   K    NA     P+  EALV E+CD + IAE +LK+G F +
Sbjct: 60  TVPTAETSATIEVKDSKEIKSSRLNAQLVPKPSEVEALVTEICDSSSIAEFELKLGGFRL 119

Query: 109 HLKRNIGVVKAPMSAISPTIPPPIPSKPMVESAPTAPAPPKSSPEKKTPFANFPFEKSSK 168
           ++ RNI    A  S++    PPP P+  +  S  T  +P  +     T  A       SK
Sbjct: 120 YVARNI----ADNSSLQ---PPPTPA--VTASNATTESPESNGSASSTSLA------ISK 179

Query: 169 LAALEASGSKGYILVSSPTVGTFRRGRTVKGKKQPPICKE 206
            A+  ++  +G +++ SP VG FRR +T+KGK+ P  CKE
Sbjct: 180 PAS--SAADQGLMILQSPKVGFFRRSKTIKGKRLPSSCKE 202

The following BLAST results are available for this feature:

BLAST of MS003381 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134353.1	1.9e-104	99.03	uncharacterized protein LOC111006634 [Momordica charantia]	[more]
XP_038886728.1	2.5e-88	85.37	biotin carboxyl carrier protein of acetyl-CoA carboxylase [Benincasa hispida]	[more]
XP_023549572.1	1.0e-86	83.01	uncharacterized protein LOC111808032 [Cucurbita pepo subsp. pepo]	[more]
XP_022993708.1	1.8e-86	83.50	uncharacterized protein LOC111489625 [Cucurbita maxima]	[more]
KAG6578462.1	8.8e-86	83.01	Protein EARLY RESPONSIVE TO DEHYDRATION 15, partial [Cucurbita argyrosperma subs...	[more]

BLAST of MS003381 vs. NCBI nr


Match Name	E-value	Identity	Description

BLAST of MS003381 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1C1S0	9.1e-105	99.03	uncharacterized protein LOC111006634 OS=Momordica charantia OX=3673 GN=LOC111006...	[more]
A0A6J1K337	8.6e-87	83.50	uncharacterized protein LOC111489625 OS=Cucurbita maxima OX=3661 GN=LOC111489625...	[more]
A0A6J1FI89	1.2e-85	82.52	uncharacterized protein LOC111445655 OS=Cucurbita moschata OX=3662 GN=LOC1114456...	[more]
A0A6J1E5I5	6.2e-85	82.04	uncharacterized protein LOC111430775 OS=Cucurbita moschata OX=3662 GN=LOC1114307...	[more]
A0A6J1JUK7	7.5e-83	80.10	uncharacterized protein LOC111487634 OS=Cucurbita maxima OX=3661 GN=LOC111487634...	[more]

BLAST of MS003381 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G56130.1	5.2e-36	52.30	biotin/lipoyl attachment domain-containing protein	[more]
AT3G56130.2	2.4e-33	60.47	biotin/lipoyl attachment domain-containing protein	[more]
AT3G56130.4	7.8e-32	50.00	biotin/lipoyl attachment domain-containing protein	[more]
AT3G56130.3	6.4e-26	58.56	biotin/lipoyl attachment domain-containing protein	[more]
AT3G15690.1	5.8e-11	35.00	Single hybrid motif superfamily protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..156
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 128..149
None	No IPR available	PANTHER	PTHR47597:SF2	BIOTIN/LIPOYL ATTACHMENT DOMAIN PROTEIN	coord: 10..205
None	No IPR available	PANTHER	PTHR47597	IS A MEMBER OF THE PF\|00364 BIOTIN-REQUIRING ENZYMES FAMILY-RELATED	coord: 10..205

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003381.1	MS003381.1	mRNA