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MS003340 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TTTTTCAATAGTGATCAAGAAGACCAGGGCGAGGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTACATCAATGGAGACGTGGGAGGCGAAGCTCTTGGAAGCAACCAAAGATGGCAAGATTGTAAGTTTCTCCTACAGTGTTGTTTCCTTAATGGCAGGATAGGGACTAAATTTCTAGCTTGTTTATTCATTGTGTTCGACATTTAACAAATTCAAGACTTTTTTCATTTATCTAAGTGAATAGTGAAGAAAAATCTACAGTGAGAGAATTGTTTTACCTCAAAACTATGCAACAGGTTATTGCAAATTTCTGTGCACCATGGTGTAGACCCAGTAAATCCATGACAGCAGGGTATTGTGAGCTTGCTGATAAGTATACCTCCATGGTATTTTTGGCCATTGACGTCGACGAGCTGGCTGTAAGTAAAAGCACTTTCCCATATTTATAGAACTTCATTATCTATGACTCTACCTTTCAATTTTAACAGTTAGGCATGTATATCTAGATTTTATTGTTTCCAAAAATTCTATACAATTTCAGATGAGAAATGAGAAATAAAAGAACAATTATCAAATACTTGTGTTTTTAGAACGTTGAAAACAAAGAATAGGGTGTAGTTTATTGTTTTATAATGTGGTTTGAATGGAAATTTCTTACACTGAGGTGTGGGGTGTGCAGGAGCTTAGTACGTCGTGGGAGATCAAAGCGACTCCAACGTTCGTGTTCCTTAAAGATGGACGCCAATTAGATAAATTAGTAGGGGCTAACAAGTCAGATCTGCAACAGAAGCTAGCTGCTATGGAAGATGTAACCAAATCTCAGAGC TTTTTCAATAGTGATCAAGAAGACCAGGGCGAGGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTACATCAATGGAGACGTGGGAGGCGAAGCTCTTGGAAGCAACCAAAGATGGCAAGATTGTTATTGCAAATTTCTGTGCACCATGGTGTAGACCCAGTAAATCCATGACAGCAGGGTATTGTGAGCTTGCTGATAAGTATACCTCCATGGTATTTTTGGCCATTGACGTCGACGAGCTGGCTGAGCTTAGTACGTCGTGGGAGATCAAAGCGACTCCAACGTTCGTGTTCCTTAAAGATGGACGCCAATTAGATAAATTAGTAGGGGCTAACAAGTCAGATCTGCAACAGAAGCTAGCTGCTATGGAAGATGTAACCAAATCTCAGAGC TTTTTCAATAGTGATCAAGAAGACCAGGGCGAGGTCCAGAATGTTGATAGCAAAAACGTACATCTCATTACATCAATGGAGACGTGGGAGGCGAAGCTCTTGGAAGCAACCAAAGATGGCAAGATTGTTATTGCAAATTTCTGTGCACCATGGTGTAGACCCAGTAAATCCATGACAGCAGGGTATTGTGAGCTTGCTGATAAGTATACCTCCATGGTATTTTTGGCCATTGACGTCGACGAGCTGGCTGAGCTTAGTACGTCGTGGGAGATCAAAGCGACTCCAACGTTCGTGTTCCTTAAAGATGGACGCCAATTAGATAAATTAGTAGGGGCTAACAAGTCAGATCTGCAACAGAAGCTAGCTGCTATGGAAGATGTAACCAAATCTCAGAGC FFNSDQEDQGEVQNVDSKNVHLITSMETWEAKLLEATKDGKIVIANFCAPWCRPSKSMTAGYCELADKYTSMVFLAIDVDELAELSTSWEIKATPTFVFLKDGRQLDKLVGANKSDLQQKLAAMEDVTKSQS Homology
BLAST of MS003340 vs. NCBI nr
Match: XP_022134270.1 (thioredoxin H4-1-like [Momordica charantia]) HSP 1 Score: 266.2 bits (679), Expect = 1.6e-67 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS003340 vs. NCBI nr
Match: XP_038890472.1 (thioredoxin H4-1-like isoform X2 [Benincasa hispida]) HSP 1 Score: 229.9 bits (585), Expect = 1.2e-56 Identity = 117/133 (87.97%), Postives = 121/133 (90.98%), Query Frame = 0
BLAST of MS003340 vs. NCBI nr
Match: XP_038890471.1 (thioredoxin H4-1-like isoform X1 [Benincasa hispida]) HSP 1 Score: 223.0 bits (567), Expect = 1.5e-54 Identity = 114/130 (87.69%), Postives = 118/130 (90.77%), Query Frame = 0
BLAST of MS003340 vs. NCBI nr
Match: XP_011656041.1 (thioredoxin H-type isoform X2 [Cucumis sativus]) HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of MS003340 vs. NCBI nr
Match: XP_004141512.2 (thioredoxin H4-1 isoform X1 [Cucumis sativus] >KGN52589.1 hypothetical protein Csa_008226 [Cucumis sativus]) HSP 1 Score: 219.9 bits (559), Expect = 1.3e-53 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of MS003340 vs. ExPASy Swiss-Prot
Match: P85801 (Thioredoxin H-type OS=Populus jackii OX=640484 PE=1 SV=1) HSP 1 Score: 145.2 bits (365), Expect = 5.2e-34 Identity = 69/124 (55.65%), Postives = 90/124 (72.58%), Query Frame = 0
BLAST of MS003340 vs. ExPASy Swiss-Prot
Match: Q9C9Y6 (Thioredoxin H9 OS=Arabidopsis thaliana OX=3702 GN=TRX9 PE=1 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 9.9e-33 Identity = 66/121 (54.55%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of MS003340 vs. ExPASy Swiss-Prot
Match: Q9AS75 (Thioredoxin H4-1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os01g0168200 PE=2 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 6.4e-32 Identity = 67/125 (53.60%), Postives = 91/125 (72.80%), Query Frame = 0
BLAST of MS003340 vs. ExPASy Swiss-Prot
Match: Q0DKF1 (Thioredoxin H4-2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os05g0169000 PE=2 SV=1) HSP 1 Score: 132.1 bits (331), Expect = 4.6e-30 Identity = 58/108 (53.70%), Postives = 82/108 (75.93%), Query Frame = 0
BLAST of MS003340 vs. ExPASy Swiss-Prot
Match: Q9LXZ8 (Putative thioredoxin H10 OS=Arabidopsis thaliana OX=3702 GN=At3g56420 PE=3 SV=2) HSP 1 Score: 131.7 bits (330), Expect = 6.0e-30 Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of MS003340 vs. ExPASy TrEMBL
Match: A0A6J1BXU2 (thioredoxin H4-1-like OS=Momordica charantia OX=3673 GN=LOC111006572 PE=4 SV=1) HSP 1 Score: 266.2 bits (679), Expect = 7.5e-68 Identity = 132/132 (100.00%), Postives = 132/132 (100.00%), Query Frame = 0
BLAST of MS003340 vs. ExPASy TrEMBL
Match: A0A0A0KUM3 (Thioredoxin domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G645140 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 6.2e-54 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of MS003340 vs. ExPASy TrEMBL
Match: A0A1S3CBI4 (thioredoxin H-type OS=Cucumis melo OX=3656 GN=LOC103498606 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.4e-53 Identity = 108/125 (86.40%), Postives = 115/125 (92.00%), Query Frame = 0
BLAST of MS003340 vs. ExPASy TrEMBL
Match: A0A6J1JH67 (thioredoxin H4-1-like OS=Cucurbita maxima OX=3661 GN=LOC111486972 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.9e-51 Identity = 104/125 (83.20%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of MS003340 vs. ExPASy TrEMBL
Match: A0A6J1H8J4 (thioredoxin H4-1-like OS=Cucurbita moschata OX=3662 GN=LOC111461044 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.9e-51 Identity = 104/125 (83.20%), Postives = 112/125 (89.60%), Query Frame = 0
BLAST of MS003340 vs. TAIR 10
Match: AT3G08710.1 (thioredoxin H-type 9 ) HSP 1 Score: 141.0 bits (354), Expect = 7.0e-34 Identity = 66/121 (54.55%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of MS003340 vs. TAIR 10
Match: AT3G08710.2 (thioredoxin H-type 9 ) HSP 1 Score: 141.0 bits (354), Expect = 7.0e-34 Identity = 66/121 (54.55%), Postives = 93/121 (76.86%), Query Frame = 0
BLAST of MS003340 vs. TAIR 10
Match: AT3G56420.1 (Thioredoxin superfamily protein ) HSP 1 Score: 131.7 bits (330), Expect = 4.3e-31 Identity = 61/125 (48.80%), Postives = 84/125 (67.20%), Query Frame = 0
BLAST of MS003340 vs. TAIR 10
Match: AT2G40790.1 (C-terminal cysteine residue is changed to a serine 2 ) HSP 1 Score: 130.2 bits (326), Expect = 1.2e-30 Identity = 62/113 (54.87%), Postives = 80/113 (70.80%), Query Frame = 0
BLAST of MS003340 vs. TAIR 10
Match: AT3G51030.1 (thioredoxin H-type 1 ) HSP 1 Score: 94.4 bits (233), Expect = 7.5e-20 Identity = 40/98 (40.82%), Postives = 66/98 (67.35%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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