MS003321 (gene) Bitter gourd (TR) v1

Overview


Name	MS003321
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	cyclin-B1-2-like
Location	scaffold234: 2049970 .. 2052595 (-)
RNA-Seq Expression	MS003321
Synteny	MS003321

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGAGTCTTCGAAGACGATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGTCTTCAAGGCGTTAAGAGCGACCTCGTCGGATCTCATCCTGTCGAATCCCTTTACGAAACTGTAATTTCCTCTCTCTCTCTCTCTCTCTCTTTCTCTCGCGATTTTAGACAATGCAGAAAAGTAAAGTGGAAGTAAATTTCTTCAATCTGAGTTGCCCTATTTGATTTCTATATAGATTCCTCTGTTTAGTCATTGCAGTTACACAAGATTGTTATTGGGAATAGAATCTAGGTTGGATAGAACTGATGAACCACTGTTTGCCTGAGTTGCTTGAATTAGGAACTTGTGATTTGAAGTTCTATTTCCTGTCTACCGGTCAATTTTCTACTTTTACCTCCCTTCTTTTAAATTTATGAGAGCCCCATCTTATAAAATTTTGTAAATATCTCATCTTGTAGTTCATTTCTTCACTCAGAAATGTGCGTGACGGAGGGATTTATCCCATGTGCCATTTGACCCTTATATAGGAAAAACCTTCTGAGAATTCCATTTTGAGTTTTTCTGGTTAAGGACACCGGGGCAAATAGGTTATGATCTCAATAAGATTGCTATGAAGAGGACTAGGAGCATCCATAATATTATTAACCCTATCGGGACTTGGAAGTAGTGACCATTCACTAGTCATTATGAACCTGTTAGCACACTTGAGGAAGGGACCAAGCTTAAGAAAAGCACCAGAAAGTCTCTTTTGTCTTTTATACAGGGTTGGGATGCTTCTCCCTTTGCATTTTTCTTCTTCATTTGCTAATAGACTTCTTTCTTCCCCAGTCTAACATGAAATAAAATTCCATGCAACATCAGAAAACATTGGGCTTTGCTTTGCCCCAGATTAGTTATGAGCTGAACTCTTAAATTTTTCGGATAATTTTAAGACGTTGAAGTTGGTTTAGTTGCTAAAAGACCATGATGCATCCACCGAGCAAGGTGTATCAACCACTATTTTCTTTTTAACACGTGAAATAAAAAAAGCAAAGCTTGATTATTGAACTAGTAGGTCAGGTTAGAATAATTTCTTTCAATTTGATAGATGTATACTTTTTTTTTTTTCTTGATTTAGACAAGGAGAACAGACGAGGAGATGAAGAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAAATGGATTTGGACAGGCAAATTCTTTCTCGGTATGGTTATTCTCCTTGCATAGATGTTGTATCTCTTCTGGTGTAGTCTAAATCGAGAACTTGTTAAAAATAAATATTACACCGAAATTTGCAGTTTTGTTATGGACCATTTTTTAACTATAATCACTTCTCTAATTGTTGTTTTTATAATGATTGAGTGCAGAAAAAAGGTTACACCTAACTTCATTGACTCTTCTACCTCCTGTGATTTCCTCTTCTTATGCATGTGAAATCTATACTTTCTAGCCCCAAGTATATCAGTATATGGCATGAACGACATATATTAAACCATTGGATGCAGTAAACGGATCTCTTTGTTATTTTCTTGTGGGAAATTCATTAGACCACTGTAATGTGAATGTTTGCAATAACTGGAGATGTGGTGGGAGCACTTTTCCCCCTCATTCCATGATATGCTAGTGGGTGCCATGAAAATAGGATGTGCCTTGTGGAGATGATGTTTGATGTGCATGAATTTCATTGGGGATGCTCCGTTCTGACCTCTTCATTTTTTTTTTCTTTTTCGCCAACATCTCTACCTGTGATGCCCAAGTCAGGCTAATTTAAGCTGTTTGTCTAGTTGGGACTTAGCAGTCATTTGTTAATATAATTTCAATTCTAACTTAAAGCTATTGCAGATTTCAGAGGCCTCCAGGAGCTATTCCATCTTCCATGCTGGGTTTGGAGGCTCTTACAGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGGTAAGATGAGTATTCTTCAAGTCACCAAGATCCTAATGACTTGTCTGATTCGGTTGTTCTCTATATTGGCATCATTAGTGAGAGTTTTCAATTAATTTAAATATTTCTTTTGATCTTGATAAATTCTTTTATGACTCATAGTAATTTGTCCGACATTGATGGGATAACTAGATCCATGAAGTATGTTCAAACATTGATTACCCCTATTCCTTGAATCTTTCTTGTCTATGAATTTGAGATTTGAATATTTAAGGAGTTTCTTCCTCATTCTCAACTTTTAAGCATCCATCCTAATACTCCGTTTGATGAAGTTCTTAAGACTTTCAGCCACTTCTGATATGCAATATGTTGTAATTTTCTTCCTTCTAGTCCGTATTCTCGAATCTTGATTGCAGGCACCTATACGCTGAGGGGGTGAATTTCTTTAGCCTTCCCTTTTCACTTTTCTATTAAACTAACATAGAACTCTTGTTGATTTGCTTTTACACGATCCTGTCGAATGCACATTTTTTATAGTAGTCTCTGGTGGTGTTTCATTTACAAGTTGTTGTGTGAATGTTATTTGCAGACCCAAGAGAGAGTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAGGTCCGCCTTGGGCTGTCCAAAGGACCAGTTTGCCCAAGTTTCATG

mRNA sequence

ATGGAGTCTTCGAAGACGATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGTCTTCAAGGCGTTAAGAGCGACCTCGTCGGATCTCATCCTGTCGAATCCCTTTACGAAACTACAAGGAGAACAGACGAGGAGATGAAGAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAAATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAGAGGCCTCCAGGAGCTATTCCATCTTCCATGCTGGGTTTGGAGGCTCTTACAGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGAGAGAGTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAGGTCCGCCTTGGGCTGTCCAAAGGACCAGTTTGCCCAAGTTTCATG

Coding sequence (CDS)

ATGGAGTCTTCGAAGACGATAGCCCATGAAATCGGAGGGATCCAGAACGATGCGCTTCGATTCGGTCTTCAAGGCGTTAAGAGCGACCTCGTCGGATCTCATCCTGTCGAATCCCTTTACGAAACTACAAGGAGAACAGACGAGGAGATGAAGAGGAAAATTCTTGTGAATACATATGGATCTGCTTTTCCACTGAAAATGGATTTGGACAGGCAAATTCTTTCTCGATTTCAGAGGCCTCCAGGAGCTATTCCATCTTCCATGCTGGGTTTGGAGGCTCTTACAGGAAGCTTGGATGACTTTGGCTTTGAAGATTATCTAAATGACCCAAGAGAGAGTGAATCTTTGAGGCCATTGGACATGCACCATGGAATGGAGGTCCGCCTTGGGCTGTCCAAAGGACCAGTTTGCCCAAGTTTCATG

Protein sequence

MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLSKGPVCPSFM

Homology

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BLAST of MS003321 vs. NCBI nr
Match: XP_022134554.1 (cyclin-B1-2-like [Momordica charantia])

HSP 1 Score: 289.7 bits (740), Expect = 1.4e-74
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of MS003321 vs. NCBI nr
Match: KAG7033243.1 (Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 286.2 bits (731), Expect = 1.5e-73
Identity = 139/141 (98.58%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of MS003321 vs. NCBI nr
Match: XP_022956483.1 (cyclin-B1-2-like [Cucurbita moschata])

HSP 1 Score: 284.6 bits (727), Expect = 4.5e-73
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSFM
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

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BLAST of MS003321 vs. NCBI nr
Match: XP_022989933.1 (cyclin-B1-2-like [Cucurbita maxima])

HSP 1 Score: 284.6 bits (727), Expect = 4.5e-73
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of MS003321 vs. NCBI nr
Match: XP_023541108.1 (cyclin-B1-2-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 284.6 bits (727), Expect = 4.5e-73
Identity = 138/141 (97.87%), Postives = 139/141 (98.58%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTG LDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGGLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

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BLAST of MS003321 vs. ExPASy Swiss-Prot
Match: Q0DWQ7 (Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1)

HSP 1 Score: 114.0 bits (284), Expect = 1.4e-24
Identity = 62/115 (53.91%), Postives = 75/115 (65.22%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGL-QGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTY 60
           M S   +  EIGG  +D +RFG+   VK DL   HP+++      +   + KR      Y
Sbjct: 1   MASGGVVKKEIGG-NHDVVRFGVNDSVKGDLAPPHPLQASVHKEAKFWADKKRFGAEAIY 60

Query: 61  GSAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESE 115
           GSAF ++ DLD QILS+FQRPPGA+PSSMLG EALTGSLDDFGFEDYLN    SE
Sbjct: 61  GSAFNIRKDLDAQILSKFQRPPGALPSSMLGYEALTGSLDDFGFEDYLNYAAASE 114

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BLAST of MS003321 vs. ExPASy Swiss-Prot
Match: Q55G18 (Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=pomp PE=3 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 2.4e-13
Identity = 43/111 (38.74%), Postives = 69/111 (62.16%), Query Frame = 0


Query: 23  LQGVKSDLVG-SHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILSRFQRPP 82
           L+   S++ G SHPVES+     +T+ ++K   + N +G+   +  ++++QI S+F+R P
Sbjct: 14  LRNESSNVKGLSHPVESIQLDQGKTEIKLKNFAMKNVFGTHMVMNNEIEKQIYSQFKRLP 73

Query: 83  GAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGLS 133
             + SSM+GLE + G  +DF F DYL DP  SE+  P  +H  ME RLG++
Sbjct: 74  -TLQSSMVGLETILGLDEDFDFGDYLCDPATSEAPLP-QLHTSMEHRLGMT 122

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BLAST of MS003321 vs. ExPASy Swiss-Prot
Match: Q3SZV5 (Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 3.5e-12
Identity = 43/116 (37.07%), Postives = 67/116 (57.76%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   +  +   ++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLP-FLPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHLMVEYKLGL 140

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BLAST of MS003321 vs. ExPASy Swiss-Prot
Match: Q9Y244 (Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-11
Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   +  +   ++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           + QR P  + SS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVQRLP-FLSSSNLSLDVLRGNDETIGFEDILNDPSQSEVMG--EPHLMVEYKLGL 140

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BLAST of MS003321 vs. ExPASy Swiss-Prot
Match: Q9CQT5 (Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1)

HSP 1 Score: 70.1 bits (170), Expect = 2.3e-11
Identity = 42/116 (36.21%), Postives = 66/116 (56.90%), Query Frame = 0


Query: 16  NDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYGSAFPLKMDLDRQILS 75
           +D LR G   VK++L+ SHP+E   +  +   ++M    L N  G   PLK+ ++ + + 
Sbjct: 28  HDLLRKGFSCVKNELLPSHPLELSEKNFQLNQDKMNFSTLRNIQGLFAPLKLQMEFKAVQ 87

Query: 76  RFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLDMHHGMEVRLGL 132
           +  R P  +PSS L L+ L G+ +  GFED LNDP +SE +   + H  +E +LGL
Sbjct: 88  QVHRLP-FLPSSNLSLDILRGNDETIGFEDILNDPSQSELMG--EPHVMVEHKLGL 140

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BLAST of MS003321 vs. ExPASy TrEMBL
Match: A0A6J1BZ23 (cyclin-B1-2-like OS=Momordica charantia OX=3673 GN=LOC111006772 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 6.8e-75
Identity = 141/141 (100.00%), Postives = 141/141 (100.00%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of MS003321 vs. ExPASy TrEMBL
Match: A0A6J1JRS1 (cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYE+TRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYESTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of MS003321 vs. ExPASy TrEMBL
Match: A0A6J1GWZ3 (cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1)

HSP 1 Score: 284.6 bits (727), Expect = 2.2e-73
Identity = 138/141 (97.87%), Postives = 140/141 (99.29%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT+EEMKRKILVNTYG
Sbjct: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTEEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHG+EVRLGLSKGPVCPSFM
Sbjct: 121 MHHGIEVRLGLSKGPVCPSFM 141

[Close]

BLAST of MS003321 vs. ExPASy TrEMBL
Match: A0A0A0KUK6 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1)

HSP 1 Score: 281.2 bits (718), Expect = 2.4e-72
Identity = 136/141 (96.45%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MESSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT EEMKRK+LVNTYG
Sbjct: 1   MESSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKVLVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of MS003321 vs. ExPASy TrEMBL
Match: A0A5D3BR37 (Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 PE=4 SV=1)

HSP 1 Score: 280.4 bits (716), Expect = 4.1e-72
Identity = 136/141 (96.45%), Postives = 137/141 (97.16%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           M+SSK I HEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRT EEMKRKILVNTYG
Sbjct: 1   MDSSKAIPHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTQEEMKRKILVNTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           SAFPLKMDLDRQILSRFQRPPG IPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD
Sbjct: 61  SAFPLKMDLDRQILSRFQRPPGPIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
           MHHGMEVRLGLSKGPVCPSFM
Sbjct: 121 MHHGMEVRLGLSKGPVCPSFM 141

[Close]

BLAST of MS003321 vs. TAIR 10
Match: AT5G38650.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61
Identity = 106/141 (75.18%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ +++ EEMKR+++ +TYG
Sbjct: 1   MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPG IPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 61  AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 121 FHHGMEVRLGLSKGPASPSFM 141

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BLAST of MS003321 vs. TAIR 10
Match: AT5G38660.2 (acclimation of photosynthesis to environment )

HSP 1 Score: 232.6 bits (592), Expect = 1.9e-61
Identity = 106/141 (75.18%), Postives = 126/141 (89.36%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKSD++ SHP+E+ YE+ +++ EEMKR+++ +TYG
Sbjct: 291 MESQKKIAHEIGGMKNDALRFGLHGVKSDILRSHPLETAYESGKQSQEEMKRRVITHTYG 350

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMDLDRQILSRFQRPPG IPSSMLGLE  TG+LD+FGFEDYLNDPRESE+L+P+D
Sbjct: 351 AALPLKMDLDRQILSRFQRPPGPIPSSMLGLEVYTGALDNFGFEDYLNDPRESETLKPVD 410

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLGLSKGP  PSFM
Sbjct: 411 FHHGMEVRLGLSKGPASPSFM 431

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BLAST of MS003321 vs. TAIR 10
Match: AT1G67250.1 (Proteasome maturation factor UMP1 )

HSP 1 Score: 227.3 bits (578), Expect = 7.9e-60
Identity = 100/141 (70.92%), Postives = 124/141 (87.94%), Query Frame = 0


Query: 1   MESSKTIAHEIGGIQNDALRFGLQGVKSDLVGSHPVESLYETTRRTDEEMKRKILVNTYG 60
           MES K IAHEIGG++NDALRFGL GVKS+++GSHP+ES YE+ +++ E +KR ++ + YG
Sbjct: 1   MESEKKIAHEIGGVKNDALRFGLHGVKSNIIGSHPLESSYESEKKSKEALKRTVIAHAYG 60

Query: 61  SAFPLKMDLDRQILSRFQRPPGAIPSSMLGLEALTGSLDDFGFEDYLNDPRESESLRPLD 120
           +A PLKMD+DRQILSRFQRPPG IPSSMLGLE  TG++DDFGFEDYLNDPR+SE+ +P+D
Sbjct: 61  TALPLKMDMDRQILSRFQRPPGPIPSSMLGLEVYTGAVDDFGFEDYLNDPRDSETFKPVD 120

Query: 121 MHHGMEVRLGLSKGPVCPSFM 142
            HHGMEVRLG+SKGP+ PSFM
Sbjct: 121 FHHGMEVRLGISKGPIYPSFM 141

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BLAST of MS003321 vs. TAIR 10
Match: AT1G62920.1 (CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR008012); BEST Arabidopsis thaliana protein match is: Proteasome maturation factor UMP1 (TAIR:AT1G67250.1); Has 70 Blast hits to 70 proteins in 15 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 70; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 57.8 bits (138), Expect = 8.3e-09
Identity = 33/71 (46.48%), Postives = 36/71 (50.70%), Query Frame = 0


Query: 62  AFPLKMDLDRQILSRF------------------------QRPPGAIPSSMLGLEALTGS 109
           A PLKMDLDR IL R+                         RP G IPS ML LE  TG+
Sbjct: 4   ALPLKMDLDRPILPRYGMLDQYHYEIIPLNSDAYSAIRYENRPTGPIPSLMLDLEVYTGA 63

The following BLAST results are available for this feature:

BLAST of MS003321 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134554.1	1.4e-74	100.00	cyclin-B1-2-like [Momordica charantia]	[more]
KAG7033243.1	1.5e-73	98.58	Cyclin-B1-2 [Cucurbita argyrosperma subsp. argyrosperma]	[more]
XP_022956483.1	4.5e-73	97.87	cyclin-B1-2-like [Cucurbita moschata]	[more]
XP_022989933.1	4.5e-73	97.87	cyclin-B1-2-like [Cucurbita maxima]	[more]
XP_023541108.1	4.5e-73	97.87	cyclin-B1-2-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of MS003321 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q0DWQ7	1.4e-24	53.91	Cyclin-B1-2 OS=Oryza sativa subsp. japonica OX=39947 GN=CYCB1-2 PE=3 SV=1	[more]
Q55G18	2.4e-13	38.74	Proteasome maturation protein homolog OS=Dictyostelium discoideum OX=44689 GN=po...	[more]
Q3SZV5	3.5e-12	37.07	Proteasome maturation protein OS=Bos taurus OX=9913 GN=POMP PE=2 SV=1	[more]
Q9Y244	2.3e-11	36.21	Proteasome maturation protein OS=Homo sapiens OX=9606 GN=POMP PE=1 SV=1	[more]
Q9CQT5	2.3e-11	36.21	Proteasome maturation protein OS=Mus musculus OX=10090 GN=Pomp PE=1 SV=1	[more]

BLAST of MS003321 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BZ23	6.8e-75	100.00	cyclin-B1-2-like OS=Momordica charantia OX=3673 GN=LOC111006772 PE=4 SV=1	[more]
A0A6J1JRS1	2.2e-73	97.87	cyclin-B1-2-like OS=Cucurbita maxima OX=3661 GN=LOC111486973 PE=4 SV=1	[more]
A0A6J1GWZ3	2.2e-73	97.87	cyclin-B1-2-like OS=Cucurbita moschata OX=3662 GN=LOC111458201 PE=4 SV=1	[more]
A0A0A0KUK6	2.4e-72	96.45	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643970 PE=4 SV=1	[more]
A0A5D3BR37	4.1e-72	96.45	Cyclin-B1-2 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G001840 P...	[more]

BLAST of MS003321 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G38650.1	1.9e-61	75.18	Proteasome maturation factor UMP1	[more]
AT5G38660.2	1.9e-61	75.18	acclimation of photosynthesis to environment	[more]
AT1G67250.1	7.9e-60	70.92	Proteasome maturation factor UMP1	[more]
AT1G62920.1	8.3e-09	46.48	CONTAINS InterPro DOMAIN/s: Proteasome maturation factor UMP1 (InterPro:IPR00801...	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR008012	Proteasome maturation factor Ump1	PFAM	PF05348	UMP1	coord: 15..129 e-value: 3.8E-34 score: 117.3
IPR008012	Proteasome maturation factor Ump1	PANTHER	PTHR12828	PROTEASOME MATURATION PROTEIN UMP1	coord: 1..141
None	No IPR available	PANTHER	PTHR12828:SF8	BNAA07G25120D PROTEIN	coord: 1..141

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003321.1	MS003321.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0043248	proteasome assembly