Homology
BLAST of MS003319 vs. NCBI nr
Match:
XP_022133458.1 (protein CROWDED NUCLEI 1 [Momordica charantia])
HSP 1 Score: 2118.2 bits (5487), Expect = 0.0e+00
Identity = 1176/1195 (98.41%), Postives = 1180/1195 (98.74%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR
Sbjct: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
Query: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA
Sbjct: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
Query: 121 KDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
KDTLKREQMAHMIAISD+EKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK
Sbjct: 121 KDTLKREQMAHMIAISDSEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
Query: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF
Sbjct: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
Query: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL
Sbjct: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
Query: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEEKLSARE 360
EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ ++KEKELLALEEKLSARE
Sbjct: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQESDALKVTLEMKEKELLALEEKLSARE 360
Query: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK
Sbjct: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
Query: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE
Sbjct: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
Query: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL
Sbjct: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
Query: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRRE 600
KQQRETFEREWEDLDDKRAQVEKEQKALMLQKE+FEKRTFSEEERLKNERLATENYIRRE
Sbjct: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEEFEKRTFSEEERLKNERLATENYIRRE 600
Query: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR
Sbjct: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
Query: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIR 720
EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAE NKEHLERQGIEIR
Sbjct: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEANKEHLERQGIEIR 720
Query: 721 KDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN 780
KDIEELLELSNKLKDQRER VRERDRFISFVDKHRSCKNCGEI SEFVLSDLHHLDGIEN
Sbjct: 721 KDIEELLELSNKLKDQRERXVRERDRFISFVDKHRSCKNCGEIASEFVLSDLHHLDGIEN 780
Query: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP 840
AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP
Sbjct: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP 840
Query: 841 AFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPS 900
AFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPS
Sbjct: 841 AFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPS 900
Query: 901 QNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTKISRTRSVLAVVEDAKAII 960
QNLSTDDQSNINSKAPEVPVDSQPSDLRGNQ GLRPRKGKTKISRTRSVLAVVEDAKAII
Sbjct: 901 QNLSTDDQSNINSKAPEVPVDSQPSDLRGNQRGLRPRKGKTKISRTRSVLAVVEDAKAII 960
Query: 961 GELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDD 1020
GELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDD
Sbjct: 961 GELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDD 1020
Query: 1021 SEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKR 1080
SEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKR
Sbjct: 1021 SEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKR 1080
Query: 1081 TEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVN 1140
TEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVN
Sbjct: 1081 TEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVN 1140
Query: 1141 GTPEVAGKYGNRGEYKSESCEVVGDEDG--DDDDEEAEHPGEASIGKKLWTFFTT 1186
GTPEVAGKYGNRGEYKSESCEVVGDEDG DDDDEEAEHPGEASIGKKLWTFFTT
Sbjct: 1141 GTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDDDEEAEHPGEASIGKKLWTFFTT 1195
BLAST of MS003319 vs. NCBI nr
Match:
ADN34280.1 (nuclear matrix constituent-like protein 1 [Cucumis melo subsp. melo])
HSP 1 Score: 1766.5 bits (4574), Expect = 0.0e+00
Identity = 999/1207 (82.77%), Postives = 1082/1207 (89.64%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSV------TPLSD 60
MFTPQ+V SGWPLTPKTG QK GAGSA+NP+SVTP+LSRRGDGIKGK+V TPLS
Sbjct: 1 MFTPQKVWSGWPLTPKTGAQKTGAGSASNPNSVTPNLSRRGDGIKGKTVAFGETTTPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
+LVEN EMFVGSAEAAALDQEGL EKIS+LENELFEYQYNMGLLLIEKKDWT KYEEL
Sbjct: 61 ALVENGGEMFVGSAEAAALDQEGLDEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L E KDTLKREQMAHMIA+SDAEK+EENLKKALGVEKECVLDLEKALREMRAENAEIK
Sbjct: 121 QALAETKDTLKREQMAHMIAMSDAEKQEENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALVTSIEEKSLEVEA+LRAADAKLAEVSRKNSEVERKLQDLEAREGALR
Sbjct: 181 FTGDSKLAEANALVTSIEEKSLEVEARLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAERE+HEATL+KQRDDLREWE++LQDAEERLAKGQTI+NQREERANENDRMVK
Sbjct: 241 RDRLSFNAERESHEATLSKQRDDLREWERKLQDAEERLAKGQTILNQREERANENDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQAKIKEKELLALEEKLSARERV 360
QKEKDLEE+QKKIDS+ L LKRKEEDI SRLA IALKEQAKIKEKELL LEEKL+ARE+V
Sbjct: 301 QKEKDLEELQKKIDSSNLALKRKEEDIGSRLANIALKEQAKIKEKELLVLEEKLTAREKV 360
Query: 361 EIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGKRE 420
EIQ+LLDEHNAILD KK+EFELEI+QKRKSLDEELK K +EVEKKEAEIKHMEEK+GKRE
Sbjct: 361 EIQQLLDEHNAILDAKKIEFELEIDQKRKSLDEELKNKVSEVEKKEAEIKHMEEKLGKRE 420
Query: 421 QALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAEVE 480
QALEKRTEK K+KEADYD KFKALKQREKS++ EEKN+EAE+KQLL D E+LI LKAEVE
Sbjct: 421 QALEKRTEKFKEKEADYDAKFKALKQREKSLKLEEKNLEAEKKQLLADTEELICLKAEVE 480
Query: 481 KIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDLKQ 540
KIRAENEAQLLKL EER SL+VSE+ERSDF RLQSELKQEIE YR QKELLLKEAEDLKQ
Sbjct: 481 KIRAENEAQLLKLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLLKEAEDLKQ 540
Query: 541 QRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRREQE 600
Q+ETFEREWE+LD+KRAQVEKEQK L+LQKE+FEKR FSEEERLKNER TE YI REQE
Sbjct: 541 QKETFEREWEELDEKRAQVEKEQKTLLLQKEEFEKRIFSEEERLKNERSETEAYIHREQE 600
Query: 601 DLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFREK 660
+LKL +ESFAASMEHEKSAIAEKAQS+RSQM+HDF+LQKRELESAMQNRV+EMER FREK
Sbjct: 601 NLKLAQESFAASMEHEKSAIAEKAQSDRSQMMHDFDLQKRELESAMQNRVEEMERGFREK 660
Query: 661 EKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIRKD 720
EKLFKEE+ERELENI +LRD+AR+EMD+LKLERLKTEKE+QEAE NKEHLERQ IEIRKD
Sbjct: 661 EKLFKEEKERELENIKFLRDVARREMDELKLERLKTEKEKQEAEANKEHLERQRIEIRKD 720
Query: 721 IEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIENAG 780
IEELLELSNKLKDQRERLV ERDRFIS+ DKHR+CKNCGEI SEFVLSDL LDG ENA
Sbjct: 721 IEELLELSNKLKDQRERLVAERDRFISYADKHRTCKNCGEIASEFVLSDLQSLDGFENAD 780
Query: 781 VLN---LPDRYLEFQGLQ------------RNGELTPGVAGPKSPISGGTISWLRKCTSK 840
VLN LPD+Y+E QGLQ RNGELTPG+AG KSPIS GTISWLRKCTSK
Sbjct: 781 VLNLPGLPDKYMEIQGLQVSSGGNMGISDVRNGELTPGLAGQKSPISAGTISWLRKCTSK 840
Query: 841 IFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKR 900
IFKFSPGKKI SPAFE+ D EA + D+HD+ AEPSKR+SA EDEAELSLAIASDSLDD+R
Sbjct: 841 IFKFSPGKKIASPAFEKQDDEAPVSDEHDDLAEPSKRMSAGEDEAELSLAIASDSLDDRR 900
Query: 901 IQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTKISRTR 960
IQSD+SGR+VEPSQNLS D+QSNI SKAPEV VDSQPSD+R N+ RP++GK KI+RTR
Sbjct: 901 IQSDVSGRDVEPSQNLSIDNQSNIISKAPEVAVDSQPSDVRENK-RQRPKRGKPKINRTR 960
Query: 961 SVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRA 1020
SV AVVEDAKAIIGEL T Q EYPNGNAEDSSQLNNESRDESSLA KGTQR +RKRTRA
Sbjct: 961 SVKAVVEDAKAIIGELQSTQQAEYPNGNAEDSSQLNNESRDESSLAGKGTQRNLRKRTRA 1020
Query: 1021 NSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQ 1080
NSS+ MGEND DDSEVRSGSVVEGQPRKRRQ+A AV+ PEKRYNLR VG A+K PS
Sbjct: 1021 NSSQIMGENDHDDSEVRSGSVVEGQPRKRRQKAAPAVRAPEKRYNLRRKVVG-ASKEPSN 1080
Query: 1081 VSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSK 1140
VSKE+ EDA VKRTEED HYS+ PT SMGV SDNAGS HLVRC TV DNQDDG+AGTSK
Sbjct: 1081 VSKELEEDATVKRTEEDVHYSRVRPTQSMGVASDNAGSTHLVRCGTVQDNQDDGVAGTSK 1140
Query: 1141 NSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDD-EEAEHPGEASIGKK 1186
SID+VS SEEVNG+PE AGKY ++GEY+SESCE VG+ED DDDD EE+ HPGE SIGKK
Sbjct: 1141 ISIDMVSQSEEVNGSPENAGKYEDQGEYRSESCEEVGNEDDDDDDEEESAHPGEVSIGKK 1200
BLAST of MS003319 vs. NCBI nr
Match:
XP_038891058.1 (protein CROWDED NUCLEI 1 [Benincasa hispida])
HSP 1 Score: 1762.3 bits (4563), Expect = 0.0e+00
Identity = 1005/1214 (82.78%), Postives = 1081/1214 (89.04%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSV------TPLSD 60
MFTPQ+V SGWPLTPKTG QK GAGSA+NP+SVTP+LSRRGDGIKGK+V TPLS
Sbjct: 1 MFTPQKVWSGWPLTPKTGTQKTGAGSASNPNSVTPNLSRRGDGIKGKTVAFGETATPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
+LVEN EMFVGSAEAAALDQEGLAEKIS+LENELFEYQYNMGLLLIEKKDWT KYEEL
Sbjct: 61 TLVENGGEMFVGSAEAAALDQEGLAEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L +AKDTLKREQMAHMIAISDAEK+EENLKKALGVEKECVLDLEKAL EMRAENAEIK
Sbjct: 121 QALADAKDTLKREQMAHMIAISDAEKQEENLKKALGVEKECVLDLEKALHEMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALV SIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR
Sbjct: 181 FTGDSKLAEANALVASIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAEREAHEAT++KQRD+LREWE++LQDAEERLAKGQTI+NQREERANENDRMVK
Sbjct: 241 RDRLSFNAEREAHEATMSKQRDELREWERKLQDAEERLAKGQTILNQREERANENDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEE 360
QKEKDLEE+QKKIDSA L LKRKEEDISSRLA IALKEQ +IKEKELL LEE
Sbjct: 301 QKEKDLEELQKKIDSANLALKRKEEDISSRLANIALKEQESDSLKVSLEIKEKELLVLEE 360
Query: 361 KLSARERVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHM 420
KLSARERVEIQKLLDEHNAILD KKVEFELEI+QKRKSLDEELK K +EVEKKEAEIKHM
Sbjct: 361 KLSARERVEIQKLLDEHNAILDAKKVEFELEIDQKRKSLDEELKNKVSEVEKKEAEIKHM 420
Query: 421 EEKVGKREQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDL 480
EEKVGKREQALEKRTEK K+KEADYDTKFKALKQREKS++SEEKN+EAE+K LL DKEDL
Sbjct: 421 EEKVGKREQALEKRTEKFKEKEADYDTKFKALKQREKSMKSEEKNLEAEKKLLLADKEDL 480
Query: 481 ISLKAEVEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLL 540
ISLKAEVEKIRAENEAQLLKL EER SL+VSE+ERSDF RLQSELKQEIE YR QKELLL
Sbjct: 481 ISLKAEVEKIRAENEAQLLKLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLL 540
Query: 541 KEAEDLKQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATE 600
KEAEDLKQQ+ETFEREWE+LD+KR QVEKEQK L+LQKE+FEKR FSEEERLKNER TE
Sbjct: 541 KEAEDLKQQKETFEREWEELDEKRVQVEKEQKNLLLQKEEFEKRIFSEEERLKNERTETE 600
Query: 601 NYIRREQEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDE 660
YI REQ++LKL +ESFAASMEHEKSA+AEKAQSERS+M+HDFELQKRELESAMQ RV+E
Sbjct: 601 AYIHREQDNLKLAQESFAASMEHEKSAVAEKAQSERSKMMHDFELQKRELESAMQIRVEE 660
Query: 661 MEREFREKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLER 720
MEREFREKEK FKEE+ERELENI +LRD+AR+EMD+LKLERLKTEKE+QEAE NKEHLER
Sbjct: 661 MEREFREKEKSFKEEKERELENIKFLRDVARREMDELKLERLKTEKEKQEAEANKEHLER 720
Query: 721 QGIEIRKDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHH 780
Q IEIRKDIEEL ELSNKLKDQRERLV ERDRFIS+VDKH +CKNCGEI SEFVLSDL
Sbjct: 721 QRIEIRKDIEELFELSNKLKDQRERLVAERDRFISYVDKHMTCKNCGEIASEFVLSDLQS 780
Query: 781 LDGIENAGVLNLPDRYLEFQGLQ------------RNGELTPGVAGPKSPISGGTISWLR 840
LDGIENA VL LPDRY+E QGLQ RNGE TPG+AG KSPIS GTISWLR
Sbjct: 781 LDGIENAYVLGLPDRYMEIQGLQVSPGGNLGISDVRNGEQTPGIAGQKSPISAGTISWLR 840
Query: 841 KCTSKIFKFSPGKKITSPAFEEVDGE--ASILDKHDNRAEPSKRISAVEDEAELSLAIAS 900
KCTSKIF+FSPGKKI SPAFE+ D E A D+HD+ AEPSKR+SA EDEAELSLAIAS
Sbjct: 841 KCTSKIFRFSPGKKIASPAFEKQDDEAPAPASDEHDDLAEPSKRMSAGEDEAELSLAIAS 900
Query: 901 DSLDDKRIQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGK 960
DSLDDKRIQSD+SGREVEPSQN STD+ SNINSKAPE+ VDS+PSD R Q RP++G+
Sbjct: 901 DSLDDKRIQSDVSGREVEPSQNFSTDNLSNINSKAPEIAVDSRPSDAREKQRKPRPKRGQ 960
Query: 961 TKISRTRSVLAVVEDAKAIIGELPQTHQVEYPNGN-AEDSSQLNNESRDESSLADKGTQR 1020
KI+RTRSV AVVEDAKAIIGEL +T QV+YPNGN AEDSSQLNNESRDESSLA KG QR
Sbjct: 961 PKINRTRSVKAVVEDAKAIIGELQETQQVDYPNGNAAEDSSQLNNESRDESSLAGKGRQR 1020
Query: 1021 TVRKRTRANSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVG 1080
+RKRTRANSS+ MGEND+DDSEVRSGSVVEGQPRKRRQRAV A PEKRYNLR +KV
Sbjct: 1021 NLRKRTRANSSQIMGENDNDDSEVRSGSVVEGQPRKRRQRAVPAA-VPEKRYNLRRTKVV 1080
Query: 1081 AAAKGPSQVSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQD 1140
A+K PS VSKE EDAPV RTEEDAHYS+ PTPSMGV SDNAGS HLVRC TVGDNQD
Sbjct: 1081 GASKDPSNVSKENEEDAPVNRTEEDAHYSRVRPTPSMGVASDNAGSTHLVRCGTVGDNQD 1140
Query: 1141 DGIAGTSKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEHPG 1186
DGIAGTSK SID+VS+SEEVNG+PE A KYG R EY+SESCE V +ED +DDDEE+EHPG
Sbjct: 1141 DGIAGTSKISIDMVSLSEEVNGSPENASKYGGRSEYRSESCEEVENED-EDDDEESEHPG 1200
BLAST of MS003319 vs. NCBI nr
Match:
XP_008459421.1 (PREDICTED: protein CROWDED NUCLEI 1 [Cucumis melo])
HSP 1 Score: 1755.7 bits (4546), Expect = 0.0e+00
Identity = 997/1215 (82.06%), Postives = 1081/1215 (88.97%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSV------TPLSD 60
MFTPQ+V SGWPLTPKTG QK GAGSA+NP+SVTP+LSRRGDGIKGK+V TPLS
Sbjct: 1 MFTPQKVWSGWPLTPKTGAQKTGAGSASNPNSVTPNLSRRGDGIKGKTVAFGETTTPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
+LVEN EMFVGSAEAAALDQEGL EKIS+LENELFEYQYNMGLLLIEKKDWT KYEEL
Sbjct: 61 ALVENGGEMFVGSAEAAALDQEGLDEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L E KDTLKREQMAHMIA+SDAEK+EENLKKALGVEKECVLDLEKALREMRAENAEIK
Sbjct: 121 QALAETKDTLKREQMAHMIAMSDAEKQEENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALVTSIEEKSLEVEA+LRAADAKLAEVSRKNSEVERKLQDLEAREGALR
Sbjct: 181 FTGDSKLAEANALVTSIEEKSLEVEARLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAERE+HEATL+KQRDDLREWE++LQDAEERLAKGQTI+NQREERANENDRMVK
Sbjct: 241 RDRLSFNAERESHEATLSKQRDDLREWERKLQDAEERLAKGQTILNQREERANENDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEE 360
QKEKDLEE+QKKIDS+ L LKRKEEDI SRLA IALKEQ +IKEKELL LEE
Sbjct: 301 QKEKDLEELQKKIDSSNLALKRKEEDIGSRLANIALKEQESDSLKVSLEIKEKELLVLEE 360
Query: 361 KLSARERVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHM 420
KL+ARE+VEIQ+LLDEHNAILD KK+EFELEI+QKRKSLDEELK K +EVEKKEAEIKHM
Sbjct: 361 KLTAREKVEIQQLLDEHNAILDAKKIEFELEIDQKRKSLDEELKNKVSEVEKKEAEIKHM 420
Query: 421 EEKVGKREQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDL 480
EEK+GKREQALEKRTEK K+KEADYD KFKALKQREKS++ EEKN+EAE+KQLL D E+L
Sbjct: 421 EEKLGKREQALEKRTEKFKEKEADYDAKFKALKQREKSLKLEEKNLEAEKKQLLADTEEL 480
Query: 481 ISLKAEVEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLL 540
I LKAEVEKIRAENEAQLLKL EER SL+VSE+ERSDF RLQSELKQEIE YR QKELLL
Sbjct: 481 ICLKAEVEKIRAENEAQLLKLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLL 540
Query: 541 KEAEDLKQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATE 600
KEAEDLKQQ+ETFEREWE+LD+KRAQVEKEQK L+LQKE+FEKR FSEEERLKNER TE
Sbjct: 541 KEAEDLKQQKETFEREWEELDEKRAQVEKEQKTLLLQKEEFEKRIFSEEERLKNERSETE 600
Query: 601 NYIRREQEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDE 660
YI REQE+LKL +ESFAASMEHEKSAIAEKAQS+RSQM+HDF+LQKRELESAMQNRV+E
Sbjct: 601 AYIHREQENLKLAQESFAASMEHEKSAIAEKAQSDRSQMMHDFDLQKRELESAMQNRVEE 660
Query: 661 MEREFREKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLER 720
MER FREKEKLFKEE+ERELENI +LRD+AR+EMD+LKLERLKTEKE+QEAE NKEHLER
Sbjct: 661 MERGFREKEKLFKEEKERELENIKFLRDVARREMDELKLERLKTEKEKQEAEANKEHLER 720
Query: 721 QGIEIRKDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHH 780
Q IEIRKDIEELLELSNKLKDQRERLV ERDRFIS+ DKHR+CKNCGEI SEFVLSDL
Sbjct: 721 QRIEIRKDIEELLELSNKLKDQRERLVAERDRFISYADKHRTCKNCGEIASEFVLSDLQS 780
Query: 781 LDGIENAGVLN---LPDRYLEFQGLQ------------RNGELTPGVAGPKSPISGGTIS 840
LDG ENA VLN LPD+Y+E QGLQ RNGELTPG+AG KSPIS GTIS
Sbjct: 781 LDGFENADVLNLPGLPDKYMEIQGLQVSSGGNMGISDVRNGELTPGLAGQKSPISAGTIS 840
Query: 841 WLRKCTSKIFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIA 900
WLRKCTSKIFKFSPGKKI SPAFE+ D EA + D+HD+ AEPSKR+SA EDEAELSLAIA
Sbjct: 841 WLRKCTSKIFKFSPGKKIASPAFEKQDDEAPVSDEHDDLAEPSKRMSAGEDEAELSLAIA 900
Query: 901 SDSLDDKRIQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKG 960
SDSLDD+RIQSD+SGR+VEPSQNLS D+QSNI SKAPEV VDSQPSD+R N+ RP++G
Sbjct: 901 SDSLDDRRIQSDVSGRDVEPSQNLSIDNQSNIISKAPEVAVDSQPSDVRENK-RQRPKRG 960
Query: 961 KTKISRTRSVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQR 1020
K KI+RTRSV AVVEDAKAIIGEL T Q EYPNGNAEDSSQLNNESRDESSLA KGTQR
Sbjct: 961 KPKINRTRSVKAVVEDAKAIIGELQSTQQAEYPNGNAEDSSQLNNESRDESSLAGKGTQR 1020
Query: 1021 TVRKRTRANSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVG 1080
+RKRTRANSS+ MGEND DDSEVRSGSVVEGQPRKRRQ+A AV+ PEKRYNLR VG
Sbjct: 1021 NLRKRTRANSSQIMGENDHDDSEVRSGSVVEGQPRKRRQKAAPAVRAPEKRYNLRRKVVG 1080
Query: 1081 AAAKGPSQVSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQD 1140
A+K PS VSKE+ EDA VKRTEED HYS+ PT SMGV SDNAGS HLVRC TV DNQD
Sbjct: 1081 -ASKEPSNVSKELEEDATVKRTEEDVHYSRVRPTQSMGVASDNAGSTHLVRCGTVQDNQD 1140
Query: 1141 DGIAGTSKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDD-EEAEHP 1186
DG+AGTSK SID+VS SEEVNG+PE AGKY ++GEY+SESCE VG+ED DDDD EE+ HP
Sbjct: 1141 DGVAGTSKISIDMVSQSEEVNGSPENAGKYEDQGEYRSESCEEVGNEDDDDDDEEESAHP 1200
BLAST of MS003319 vs. NCBI nr
Match:
XP_011656032.1 (protein CROWDED NUCLEI 1 [Cucumis sativus])
HSP 1 Score: 1749.6 bits (4530), Expect = 0.0e+00
Identity = 993/1216 (81.66%), Postives = 1076/1216 (88.49%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSV------TPLSD 60
MFTPQ+V SGWPLTPKTG QK GAGSA+NP+SVTP+LSR+GDGIKGK+V TPLS
Sbjct: 1 MFTPQKVWSGWPLTPKTGAQKTGAGSASNPNSVTPNLSRKGDGIKGKTVAFGETTTPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
+LVEN EMFVGSAEAAALDQEGLAEKIS+LENELFEYQYNMGLLLIEKKDWT KYEEL
Sbjct: 61 ALVENGGEMFVGSAEAAALDQEGLAEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L E KDTLKREQMAHMIAISDAEK+EENLKKALGVEKECVLDLEKALREMRAENAEIK
Sbjct: 121 QALAETKDTLKREQMAHMIAISDAEKQEENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALVTSIEEKSLEVEA+LRAADAKLAEVSRKNSEVERKLQDLEAREGALR
Sbjct: 181 FTGDSKLAEANALVTSIEEKSLEVEARLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAERE+HEATL+KQRDDLREWE++LQDAEERLAKGQTI+NQREERANE+DRMVK
Sbjct: 241 RDRLSFNAERESHEATLSKQRDDLREWERKLQDAEERLAKGQTILNQREERANESDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEE 360
QKEKDLEE+QKKIDS+ L LKRKEEDI SRLA IALKEQ +IKEKELL LEE
Sbjct: 301 QKEKDLEELQKKIDSSNLALKRKEEDIGSRLANIALKEQESDSLKVSLEIKEKELLVLEE 360
Query: 361 KLSARERVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHM 420
KLSARE+VEIQKLLDEHNAILD KK+EFELEI+QKRKSLDEELK K +EVEKKEAEIKHM
Sbjct: 361 KLSAREKVEIQKLLDEHNAILDAKKIEFELEIDQKRKSLDEELKSKVSEVEKKEAEIKHM 420
Query: 421 EEKVGKREQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDL 480
EEKVGKREQALEKRTEK K+KE DYD KFKALKQREKS++ EEKN+EAE+KQLL D E+L
Sbjct: 421 EEKVGKREQALEKRTEKFKEKEGDYDAKFKALKQREKSLKLEEKNLEAEKKQLLADTEEL 480
Query: 481 ISLKAEVEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLL 540
ISLKAEVEKIRAENEAQLLKL EER SL+VSE+ERSDF RLQSELKQEIE YR QKELLL
Sbjct: 481 ISLKAEVEKIRAENEAQLLKLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLL 540
Query: 541 KEAEDLKQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATE 600
KEAEDLKQQ+ETFEREWE+LD+KRAQVEKEQK L+LQKE+FEKR FSEEERLK+ERL TE
Sbjct: 541 KEAEDLKQQKETFEREWEELDEKRAQVEKEQKTLLLQKEEFEKRIFSEEERLKSERLETE 600
Query: 601 NYIRREQEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDE 660
YI REQE+LKL +ESFAASMEHEKSAIAEKAQS+RSQM+HDF+LQKRELESAMQNRV+E
Sbjct: 601 AYIHREQENLKLAQESFAASMEHEKSAIAEKAQSDRSQMMHDFDLQKRELESAMQNRVEE 660
Query: 661 MEREFREKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLER 720
MER FREK+KLFKEE+ERELENI +LRD+AR+EMD+LKLERLKTEKERQEAE NKEHLER
Sbjct: 661 MERGFREKDKLFKEEKERELENIKFLRDVARREMDELKLERLKTEKERQEAEANKEHLER 720
Query: 721 QGIEIRKDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHH 780
Q IEIRKDIEELLELSNKLKDQRERLV ERDRFIS+VDKH +CKNCGEI SEFVLSDL +
Sbjct: 721 QRIEIRKDIEELLELSNKLKDQRERLVAERDRFISYVDKHVTCKNCGEIASEFVLSDLQY 780
Query: 781 LDGIENAGVLN---LPDRYLEFQGLQ--------------RNGELTPGVAGPKSPISGGT 840
LDG ENA VLN LPD+Y+E QGLQ +NGELTPG AG KSPIS GT
Sbjct: 781 LDGFENADVLNLPGLPDKYMEIQGLQVSVSPGGNLGISDVKNGELTPGGAGQKSPISAGT 840
Query: 841 ISWLRKCTSKIFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLA 900
ISWLRKCTSKIFKFSPGKKI SPAFE+ D EA + D+HD+ AEPSKR+S EDE ELSLA
Sbjct: 841 ISWLRKCTSKIFKFSPGKKIVSPAFEKQDDEAPVSDEHDDLAEPSKRMSVGEDEVELSLA 900
Query: 901 IASDSLDDKRIQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPR 960
IASDSLDD+RIQSD+SGR+VEPSQNLS D+QSNI SK PEV VDSQPSD+R N+ RP+
Sbjct: 901 IASDSLDDRRIQSDVSGRDVEPSQNLSIDNQSNIVSKVPEVAVDSQPSDVRENK--KRPK 960
Query: 961 KGKTKISRTRSVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGT 1020
+GK KI+RTRSV AVVEDAKAIIGEL T Q EYPNGNAEDSSQLNNESRDESSLA KGT
Sbjct: 961 RGKPKINRTRSVKAVVEDAKAIIGELQPTQQAEYPNGNAEDSSQLNNESRDESSLAGKGT 1020
Query: 1021 QRTVRKRTRANSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSK 1080
QR +RKRTRANSS+ MGEND DDSEVRSGSVVEGQPRKRRQRA AV+ PEKRYNLR
Sbjct: 1021 QRNLRKRTRANSSQIMGENDHDDSEVRSGSVVEGQPRKRRQRAAPAVRAPEKRYNLRRKV 1080
Query: 1081 VGAAAKGPSQVSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDN 1140
VG A+K PS +SKE E V R EED HYS+ PTPSMGV SDNAGSAHLVRC TV DN
Sbjct: 1081 VG-ASKEPSNISKEHEEVGTVNRREEDVHYSRVRPTPSMGVASDNAGSAHLVRCGTVQDN 1140
Query: 1141 QDDGIAGTSKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEH 1186
QDDG+AGTSK SID+VS SEEVNG+PE AGKY + GEY+SESCE VG+ED DDD+EE+ H
Sbjct: 1141 QDDGVAGTSKISIDMVSQSEEVNGSPENAGKYEDHGEYRSESCEEVGNEDDDDDEEESAH 1200
BLAST of MS003319 vs. ExPASy Swiss-Prot
Match:
F4HRT5 (Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana OX=3702 GN=CRWN1 PE=1 SV=1)
HSP 1 Score: 869.0 bits (2244), Expect = 6.2e-251
Identity = 576/1201 (47.96%), Postives = 804/1201 (66.94%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
M TP +V W K A NP S + S G G+ VTP+S + E +
Sbjct: 1 MSTPLKVWQRWSTPTK----------ATNPDS---NGSSHGTGL--DMVTPVSGRVSEIQ 60
Query: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
+ D L EKIS+LE ELFEYQ++MGLLLIEKK+W+S+YE L Q E
Sbjct: 61 FD-----------DPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEV 120
Query: 121 KDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
+ LK+E+ AH+IAI+D EKREE L+KALG+EK+C LDLEKAL+E+RAENAEIKFT DSK
Sbjct: 121 NECLKQERNAHLIAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSK 180
Query: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
L EANALV S+EEKSLEVEAKLRA DAKLAEVSRK+S+VERK +++EARE +L+R+R S+
Sbjct: 181 LTEANALVRSVEEKSLEVEAKLRAVDAKLAEVSRKSSDVERKAKEVEARESSLQRERFSY 240
Query: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
AEREA EATL+KQR+DLREWE++LQ+ EER+AK Q I+ QRE+RANE+D+++KQK K+L
Sbjct: 241 IAEREADEATLSKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKEL 300
Query: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEEKLSARE 360
EE QKKID+A L +K+ E+D+SSR+ +AL+EQ + K +EL AL+EKL ARE
Sbjct: 301 EEAQKKIDAANLAVKKLEDDVSSRIKDLALREQETDVLKKSIETKARELQALQEKLEARE 360
Query: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
++ +Q+L+DEH A LD + EFELE+EQKRKS+D+ LK K AEVEK+EAE KHMEEKV K
Sbjct: 361 KMAVQQLVDEHQAKLDSTQREFELEMEQKRKSIDDSLKSKVAEVEKREAEWKHMEEKVAK 420
Query: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
REQAL+++ EK K+KE D+D + K + REK+++SEEK +E E+K+LL DKE +++LKA
Sbjct: 421 REQALDRKLEKHKEKENDFDLRLKGISGREKALKSEEKALETEKKKLLEDKEIILNLKAL 480
Query: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
VEK+ EN+AQL ++ +E++ L V+E ERS++ RLQ+ELK++IE R Q+ELL KEAEDL
Sbjct: 481 VEKVSGENQAQLSEINKEKDELRVTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDL 540
Query: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRRE 600
K QRE+FE+EWE+LD+++A++ E K + QKEK E+ EEERLK E+ A + RE
Sbjct: 541 KAQRESFEKEWEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERE 600
Query: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
E L++ K SFA +ME+E+S +++KA+SERSQ+LHD E++KR+LES MQ ++E ERE +
Sbjct: 601 LETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKERELQ 660
Query: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIR 720
K+KLF+EE+E+EL NINYLRD+AR+EM D++ ER + EKE+ E + +K HLE Q EIR
Sbjct: 661 AKKKLFEEEREKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNHLEEQQTEIR 720
Query: 721 KDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN 780
KD+++L+ L+ KLK+QRE+ + ER RF+S ++ +R+C CGE+ SE VL ++ +L+
Sbjct: 721 KDVDDLVALTKKLKEQREQFISERSRFLSSMESNRNCSRCGELLSELVLPEIDNLEMPNM 780
Query: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP 840
+ + N+ D Q ++ +++P AG P++GG +SW RKCTSK+ K SP K+T P
Sbjct: 781 SKLANILDNEAPRQEMR---DISPTAAGLGLPVTGGKVSWFRKCTSKMLKLSP-IKMTEP 840
Query: 841 A--FEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVE 900
+ + D E ++ N PS + A + S D ++ +S+ +EVE
Sbjct: 841 SVTWNLADQEPQSTEQ-ANVGGPSTTVQAA----------TTYSFDVQKAESETGTKEVE 900
Query: 901 PSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTKISRTRSVLAVVEDAKA 960
+ S DQS+INSKA EV DS S+L + KGK + RTRSV VV+DAKA
Sbjct: 901 VTNVNSDGDQSDINSKAQEVAADSL-SNLDVDGQSRMKGKGKARTRRTRSVKDVVDDAKA 960
Query: 961 IIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSK-FMGEND 1020
+ GE ++ PN + E+ S E+ +DK + RKR R S + E D
Sbjct: 961 LYGESINLYE---PNDSTENVDDSTKASTGETGRSDKAISKNGRKRGRVGSLRTCTTEQD 1020
Query: 1021 DDDSEVRSGSVVEGQPRKRRQRAVRAVQTPE---KRYNL-RPSKVGAAAKGPSQVSKEIG 1080
++S+ +S SV G +++R++ V + Q E +RYNL RP +V G +SK+
Sbjct: 1021 GNESDGKSDSVTGGAHQRKRRQKVASEQQGEVVGQRYNLRRPRRV----TGEPALSKK-N 1080
Query: 1081 EDAPVKRTEEDAHYSKALPTPSMGV-TSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDI 1140
ED + EE H ++A T S+GV SDN S ++V+ D++D AG+ K + +
Sbjct: 1081 EDIGGVQQEEGIHCTQATATASVGVAVSDNGVSTNVVQHEATADSEDTD-AGSPKRTDES 1132
Query: 1141 VSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEHPGEASIGKKLWTFFT 1186
++SE+VN TP + D DG+DD+ +AEHPG+ SIGKKLWTF T
Sbjct: 1141 EAMSEDVNKTP------------------LRADSDGEDDESDAEHPGKVSIGKKLWTFLT 1132
BLAST of MS003319 vs. ExPASy Swiss-Prot
Match:
A0A166B1A6 (Nuclear matrix constituent protein 1 OS=Daucus carota subsp. sativus OX=79200 GN=NMCP1 PE=1 SV=2)
HSP 1 Score: 863.2 bits (2229), Expect = 3.4e-249
Identity = 562/1143 (49.17%), Postives = 775/1143 (67.80%), Query Frame = 0
Query: 73 LDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEAKDTLKREQMAHM 132
++ GL K+ KLE ELF+YQYNMGLLLIEKK+WTSK+EEL Q E KD LK+EQ AH+
Sbjct: 4 VEDMGLNAKLMKLETELFDYQYNMGLLLIEKKEWTSKFEELQQVYTETKDALKQEQEAHL 63
Query: 133 IAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSKLAEANALVTSIE 192
IAISDAEKREENL KALGVEK+CVLDLEKALR+MR++ AEIKFT DSKLAEA+AL+T +E
Sbjct: 64 IAISDAEKREENLTKALGVEKQCVLDLEKALRDMRSDYAEIKFTSDSKLAEASALITKVE 123
Query: 193 EKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSFNAEREAHEATLA 252
EKSLEVE+KL +ADAKLAE+SRK S++ERK +LEARE ALRR+RL+ NAEREA ++
Sbjct: 124 EKSLEVESKLHSADAKLAELSRKGSDIERKSHELEARESALRRERLALNAEREALTDNIS 183
Query: 253 KQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDLEEIQKKIDSAIL 312
+QR+DLREWE++LQ+ EERLA+ + ++NQREERANENDR+ +QK+ +L+ QKKI+ ++
Sbjct: 184 RQREDLREWERKLQEDEERLAEVRRLLNQREERANENDRLYQQKQSELDGEQKKIEIIMV 243
Query: 313 DLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEEKLSARERVEIQKLLDEHN 372
LK KE+DISSR+A + +KE+ ++KEK+L E+KL+ARE+ EIQKLLDEH
Sbjct: 244 SLKNKEDDISSRIAKLNIKEKEADAVKHSLEVKEKDLTEFEQKLNAREQSEIQKLLDEHK 303
Query: 373 AILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGKREQALEKRTEKL 432
AIL+ KK FE+E+++++ + +L+ +A EVEKKE E+KH+E K+ KRE AL+++ EKL
Sbjct: 304 AILEVKKQSFEMEMDKRKNDFENDLQNRAVEVEKKEVEVKHLEAKLAKREHALDQKHEKL 363
Query: 433 KDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAEVEKIRAENEAQL 492
K+KE +K + L +REKS++ EE IE ER QLL+DK++++ LKAE+EK RA E Q
Sbjct: 364 KEKEQYLASKLQDLNEREKSMKLEENKIEDERNQLLSDKQEMLCLKAEIEKDRASTEEQR 423
Query: 493 LKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDLKQQRETFEREWE 552
LKL EE L+++E ER + RLQSELKQEIEN R Q+ELLLKE ++LKQ++ FE+EWE
Sbjct: 424 LKLSEEIERLKITEEERLELARLQSELKQEIENCRHQRELLLKEEDELKQEKMRFEKEWE 483
Query: 553 DLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRREQEDLKLVKESFA 612
DLD++R + K+ K + +QKE FEK SEE+RL N++L TE+Y+++E + L+L K+SFA
Sbjct: 484 DLDERRTALMKDLKDITVQKENFEKLKHSEEDRLNNKKLDTESYVQKELDALRLTKDSFA 543
Query: 613 ASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFREKEKLFKEEQER 672
A+MEHEK+ +AE+ SE+ QML+DFEL KRELE+ + N ++ME R +EK F EE+E+
Sbjct: 544 ATMEHEKAVLAERTSSEKKQMLNDFELWKRELETKLFNEREDMENALRLREKQFDEEREK 603
Query: 673 ELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIRKDIEELLELSNK 732
EL NINY++++ KE +D+KLER + KE+QE ++++HL+ Q + ++KDI +L+ LS K
Sbjct: 604 ELNNINYIKEVISKEREDIKLERSRIAKEKQEILMHQKHLDEQHVVMQKDIGQLVSLSEK 663
Query: 733 LKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIENAGVLNLP---DR 792
LKDQRE+ +ER+ FI FV+ +SCKNCGE+TSEFV+SDL L +EN L++P +
Sbjct: 664 LKDQREQFFKERECFIRFVESQKSCKNCGEMTSEFVVSDLQSLAELENLKALSVPQLAEN 723
Query: 793 YL--EFQGL--QRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSPAFEEV 852
YL + QG + +TPG G SP SGGT SWL+KCTSKIF FS KK SP
Sbjct: 724 YLRQDLQGTPDKNLSTVTPGAVGLGSPASGGTKSWLQKCTSKIFIFSASKKNNSP----- 783
Query: 853 DGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPSQNLST 912
+ + + A P+K ++ E EL +A ++L+ + +Q S RE+E + NLS
Sbjct: 784 --DQNTSRRLHVEASPNKLLN-TEVIPELPSGVAGETLEMQNMQVSNSNREMESNLNLSG 843
Query: 913 DDQSNINSKAPEVPVDSQPSDLR-GNQWGLRP-RKGKTKISRTRSVLAVVEDAKAIIGEL 972
+QSNI+SKA +V DSQ SD+R GN+ +P ++ K ++ R RS V E+AK ++ +
Sbjct: 844 TEQSNIDSKALDVE-DSQQSDVRAGNR---KPGKRAKGRVRRKRSAKEVAEEAKTVLADP 903
Query: 973 PQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDDSEV 1032
+ ++ E+ NG A S NESR +SSL K T R RKR + S+ + DSE
Sbjct: 904 IELNENEHSNGLA---SAYTNESRGDSSLVGKRT-RNSRKRNPSQPSQSAAGDVGADSEG 963
Query: 1033 RSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGA------AAKGPSQVSKE------ 1092
S SV G +KRR++ V AVQ P RYNLR K A A P++ ++
Sbjct: 964 HSDSVTAGGRQKRRRKVVPAVQAPTGRYNLRRHKTAAPLVANGALSDPNKGKEKEIDDGG 1023
Query: 1093 -IGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSI 1152
IGE+ P + + H + + SA ++QD A +
Sbjct: 1024 GIGEEIP-DEVDGNTHLVQVTTLKKRINVVNEFSSAGFHGINATSESQDRDAA---NQLV 1083
Query: 1153 DIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEHPGEASIGKKLWTF 1186
+SEEVNGTPE + Y N+G + G E D+D +E EHPGE S+ KK+W F
Sbjct: 1084 SDTMLSEEVNGTPEQSRGYQNQG-------DTSGAEGEDEDGDEVEHPGEVSMRKKVWKF 1119
BLAST of MS003319 vs. ExPASy Swiss-Prot
Match:
I0J0E7 (Nuclear matrix constituent protein 1 OS=Allium cepa OX=4679 GN=NMCP1 PE=2 SV=1)
HSP 1 Score: 619.8 bits (1597), Expect = 6.5e-176
Identity = 490/1242 (39.45%), Postives = 725/1242 (58.37%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQK---GGAGSAAN-PSSVTP----SLSRRGDGIKGKSVTPL 60
M TPQ RS W L K +K G G N S+ TP L GD +G
Sbjct: 1 MLTPQ--RSAWSLKSKVSSEKPRSKGKGITKNLDSAATPFPPLGLLNGGDLDRGGED--- 60
Query: 61 SDSLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEE 120
++ + E + + D+E LA +I +LE +L EYQYNMGLLLIEKK+W+S +EE
Sbjct: 61 MEAWKRFKDEGLLDESICYKKDRESLASRIIELEKDLHEYQYNMGLLLIEKKEWSSHFEE 120
Query: 121 LSQGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAE 180
+ L EA++ LKREQ AH+IA++++EKRE+NL+KALGVEK+CV DLEKALREMR+E AE
Sbjct: 121 MKMRLAEAEEILKREQAAHIIALTESEKREDNLRKALGVEKQCVTDLEKALREMRSEIAE 180
Query: 181 IKFTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGA 240
+K+T + K+ EA AL SIEEK L+ E KL +ADAKLAE SRK+SE+ RKL+D+E RE
Sbjct: 181 VKYTAEKKMTEAFALEASIEEKRLDTERKLHSADAKLAEASRKSSEINRKLEDVEDRERK 240
Query: 241 LRRDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRM 300
++R+ S N+ER+A E +++Q++ LREWEK+LQD + RL GQ IN+REER NE +
Sbjct: 241 VQRELNSINSERKALEKDISEQKEHLREWEKKLQDGQNRLLDGQRHINEREERINEAEGG 300
Query: 301 VKQKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLAL 360
+K+KE++LEE ++ I+ LKRKEED+ RL ++ KE+ + KEK+L +
Sbjct: 301 LKKKEEELEEAKRSIEGTRNTLKRKEEDLDVRLRSLVSKEKEIELKMKNLQKKEKDLHEI 360
Query: 361 EEKLSARERVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIK 420
EKL RER EIQKLLDEH A LD KK EFELE+E KRKS+DEELK K A V K E E+
Sbjct: 361 AEKLDHREREEIQKLLDEHRATLDTKKREFELELESKRKSVDEELKSKFAAVNKAEKEVN 420
Query: 421 HMEEKVGKREQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKE 480
+ + + E+ LE + +K+K KE D +TK KALK+ E+S++S+EK + AE+ Q++ D
Sbjct: 421 RKQGLISEGEKELESKMDKIKIKEKDLETKSKALKKWEESLKSDEKKLVAEKDQIMKDTH 480
Query: 481 DLISLKAEVEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKEL 540
+L E+E +R A+ ++ EER LE+S+ ER + + QSELKQEIE YR +E
Sbjct: 481 ELKVSINELESLRDALNAEQHQIAEEREKLEISKEEREQYIQKQSELKQEIEKYRNMQEE 540
Query: 541 LLKEAEDLKQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLA 600
L K E L+++RE FE+EWE LD+K+ +++E K + +KEK EK ++ERL+NE
Sbjct: 541 LSKGIESLREEREKFEKEWESLDEKKITLQRETKKIHEEKEKLEKWHHKDQERLRNEEAN 600
Query: 601 TENYIRREQEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRV 660
+ I R+ ED+KL KE+F +M+HE+ E+ + + + EL+K +LE MQ +
Sbjct: 601 AKADIERQLEDIKLQKEAFENTMKHERLMAQEEVARRLADVTRELELRKHDLEMNMQKKQ 660
Query: 661 DEMEREFREKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHL 720
+E+ER+ + KE+ F+ +E EL I L ++ ++ L++E+ + ++E++E E+ K+ L
Sbjct: 661 EEIERKLQGKEREFETRKEAELSRITSLINLNNSKLQKLRIEQDRLDREKEEVELQKKKL 720
Query: 721 ERQGIEIRKDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEF-VLSD 780
+ EI++D++ L +LS LK+QR ++E++ F++ ++ ++C+NCG SE ++
Sbjct: 721 QEDQSEIQRDVDTLRQLSKNLKNQRAEFIKEKECFLAAAERCKTCQNCGVSISELEMVGI 780
Query: 781 LHHLDGIENAGVL--NLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIF 840
+ IENA ++ +L D ++E + +T G + SG +L+KCT KIF
Sbjct: 781 IQSSAEIENADIVLPSLTDDHIEQHMKNKGSHVTSPQTGSRVFGSG----FLQKCT-KIF 840
Query: 841 KFSPGKKITSPAF-------EEVDGEAS--ILDKHDNRAEPSKRI----SAVEDEAELSL 900
KFSPGK + A EE+D AS +N A +R+ S V E +
Sbjct: 841 KFSPGKNAETSATTTPLVFGEELDIAASEDAAANDNNPAADVERVTVNPSLVFGEQLDTA 900
Query: 901 AIASDSLDDKRIQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRP 960
A + +D +D+ V P + N ++ P + P RG + R
Sbjct: 901 ASEDAAANDNNPAADVERVTVNPPPLAPVATEQNETEESSLPPENDSPPKQRGGRQSTRR 960
Query: 961 RKGKTKISRTRSVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKG 1020
+G + RTR++ AVV+DAKAI+G+ T VE A++SSQ N+E +S+ G
Sbjct: 961 GRGGKTVRRTRTMEAVVDDAKAILGD---TLIVE----EAKESSQQNDEQSQGASVHTGG 1020
Query: 1021 TQRTVRKRTRANSSKFM-GENDDDDSEVRSGSVV--EGQPRKRRQRAVRAVQTP--EKRY 1080
T T +KR RA +S+ E+D ++SE +S S+ G+ +KR+ A VQ P E+RY
Sbjct: 1021 TSNTRQKRRRAPASEMTNSEHDVEESESQSQSISIGRGRRKKRQTSAASEVQAPVVERRY 1080
Query: 1081 NLRPSKVGAAAKGPSQVSKEIGEDAPV--KRTEEDAHYSKALPTPSMGVTSDNAGS---A 1140
NLR S V AK + + + A V K + + +H + + SMG GS
Sbjct: 1081 NLRHSTV---AKNSVAATLAVSDQAKVQTKASHQASHDNNQI---SMGDDPALEGSHKVT 1140
Query: 1141 HLVRCRTVGD----NQDDGIAGTSKNSIDI--VSVSE---------EVNGTPEVAGKYGN 1186
H V+ T + + T + +I + V +SE EV G P +A +
Sbjct: 1141 HTVQKTTTASVMEVSSKPAMEETHEENIVVRSVEISEMSASEEAEGEVQGVPPIAEEPAT 1200
BLAST of MS003319 vs. ExPASy Swiss-Prot
Match:
Q9SAF6 (Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana OX=3702 GN=CRWN2 PE=1 SV=1)
HSP 1 Score: 565.5 bits (1456), Expect = 1.5e-159
Identity = 430/1133 (37.95%), Postives = 650/1133 (57.37%), Query Frame = 0
Query: 74 DQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEAKDTLKREQMAHMI 133
DQE L EKIS LE EL+ YQ+NMGLLL+E K+ SK+E+L+Q EA++ LKREQ +H+
Sbjct: 81 DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 140
Query: 134 AISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSKLAEANALVTSIEE 193
A++ E+REENL+KALG+EK+CV +LEKALRE++ EN++I+ + ++KL EANALV S+
Sbjct: 141 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 200
Query: 194 KSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSFNAEREAHEATLAK 253
+S +VE K+ +A++KLAE +RK+SE++ +L+++E RE L+++RLSF ERE++E T K
Sbjct: 201 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 260
Query: 254 QRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDLEEIQKKIDSAILD 313
QR+ L EWEK+LQ EE + + + +NQREE+ NE ++ +K KEK+LEE +K+D ++
Sbjct: 261 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 320
Query: 314 LKRKEEDISSRLAAIALKEQAK--------IKEKELLALEEKLSARERVEIQKLLDEHNA 373
K EEDI+ RL + KE+ KE EL A EEKL ARE EIQKL+D+
Sbjct: 321 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGTEIQKLIDDQKE 380
Query: 374 ILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGKREQALEKRTEKLK 433
+L K +EFELE E+ RKSLD+EL+ K E+E+++ EI H EEK+ KR QA+ K+ +++
Sbjct: 381 VLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVEIDHSEEKLEKRNQAMNKKFDRVN 440
Query: 434 DKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAEVEKIRAENEAQLL 493
+KE D + K K +K+REK +++EEK + E++QLL+DKE L L+ E+EKIRAE +
Sbjct: 441 EKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKEE 500
Query: 494 KLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDLKQQRETFEREWED 553
+ EE SLE+ + ER ++ RLQSELK +IE R +E L KE E+LKQ++E FE+EWE
Sbjct: 501 MIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEI 560
Query: 554 LDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRREQEDLKLVKESFAA 613
LD+K+A KE+ + +KEKFE+ E ERLK E A I +E +D++L +ESF A
Sbjct: 561 LDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESALRVQIMQELDDIRLQRESFEA 620
Query: 614 SMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFREKEKLFKEEQERE 673
+MEHE+SA+ EK + E+S+++ D E+ +R LE +Q R ++ E++ ++ F++++ E
Sbjct: 621 NMEHERSALQEKVKLEQSKVIDDLEMMRRNLEIELQERKEQDEKDLLDRMAQFEDKRMAE 680
Query: 674 LENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIRKDIEELLELSNKL 733
L +IN+ + +EM+++ +R +KE +E +K+ L+ Q +E+ DI EL LS L
Sbjct: 681 LSDINHQKQALNREMEEMMSKRSALQKESEEIAKHKDKLKEQQVEMHNDISELSTLSINL 740
Query: 734 KDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIENA-----GVLN-LP 793
K +RE RER RF++FV K + C +CG++ ++FVLSDL E A GVLN LP
Sbjct: 741 KKRREVFGRERSRFLAFVQKLKDCGSCGQLVNDFVLSDLQLPSNDEVAILPPIGVLNDLP 800
Query: 794 DRYLEFQGLQRNGELTPGVAGPKSPISGG----TISWLRKCTSKIFKFSPGKKITSPAFE 853
L +G SGG ++S L+KCTS I FSP K++
Sbjct: 801 GSSNASDSCNIKKSLDGDASG-----SGGSRRPSMSILQKCTSII--FSPSKRV------ 860
Query: 854 EVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPSQNL 913
+ + +P +R+S+ S+A+ ++ +K + D+ R S ++
Sbjct: 861 ---------EHGIDTGKPEQRLSS-------SVAVGMETKGEKPLPVDLRLR--PSSSSI 920
Query: 914 STDDQSNINSKAPEVPVDSQPSDLRGNQWGL-RPRKGKTKISRTRSVLAVVEDAKAIIGE 973
+D+ +S+ E SQ S+ + ++ G RPRK K ++ T SV
Sbjct: 921 PEEDEEYTDSRVQETSEGSQLSEFQSSRRGRGRPRKAKPALNPTSSV------------- 980
Query: 974 LPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDDSE 1033
+ L S+DE S G K+T + DD
Sbjct: 981 ---------------KHASLEESSKDELS----GHVSVTSKKTTGGGGRKRQHIDD---- 1040
Query: 1034 VRSGSVVEGQPRKRRQRAVRAVQTP-EKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKRT 1093
G R+R+Q QTP ++ YNLR K QV ++ ++A
Sbjct: 1041 -----TATGGKRRRQQTVAVLPQTPGQRHYNLRRKKT------VDQVPADVEDNAAAGED 1100
Query: 1094 EEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVNG 1153
+ D A PS + +R R + N D ++ + + + +V VN
Sbjct: 1101 DADI----AASAPSKDTVEETV--VETLRARRIETNA-DVVSAENNGDVPVANVEPTVNE 1128
Query: 1154 TPEVAGKYGNRGEYKSESCEVVGDEDGDD-DDEEAEHPGEASIGKKLWTFFTT 1186
G ++ E D+D DD DD+ + PGE SI KKLWTF TT
Sbjct: 1161 DTNEDGDEEEDEAQDDDNEENQDDDDDDDGDDDGSPRPGEGSIRKKLWTFLTT 1128
BLAST of MS003319 vs. ExPASy Swiss-Prot
Match:
Q9CA42 (Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana OX=3702 GN=CRWN3 PE=1 SV=1)
HSP 1 Score: 557.8 bits (1436), Expect = 3.0e-157
Identity = 459/1209 (37.97%), Postives = 671/1209 (55.50%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
MFTPQR R WP T + G + P L D K K V L ++ +E +
Sbjct: 1 MFTPQRNR--WPETDRKGKAIAFSDEIITPPPQRVLLREDDDWQKFKEVGLLDEASLERK 60
Query: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
D++ L EKI KLE ELF+YQ+NMGLLLIEKK WTS EL Q EA
Sbjct: 61 -------------DRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNELQQAYDEA 120
Query: 121 KDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
+ LKRE+ ++ I +++A+KREENL+KAL EK+ V +LE L+ + E++ +K T ++K
Sbjct: 121 MEMLKREKTSNAITLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVVKSTSEAK 180
Query: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
L EANALV ++EK+LEV+ + A+ K + ++RK+SE+ERKL+++E RE +R+ LS
Sbjct: 181 LEEANALVIGMKEKALEVDRERAIAEEKFSVMNRKSSELERKLKEVETREKVHQREHLSL 240
Query: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
EREAHEA KQR+DL+EWEK+L E+RL++ + IN REER EN+R +++KEK L
Sbjct: 241 VTEREAHEAVFYKQREDLQEWEKKLTLEEDRLSEVKRSINHREERVMENERTIEKKEKIL 300
Query: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKE--------QAKIKEKELLALEEKLSARE 360
E +Q+KI A +L KEE I +L I+LKE + IKEKEL EE L RE
Sbjct: 301 ENLQQKISVAKSELTEKEESIKIKLNDISLKEKDFEAMKAKVDIKEKELHEFEENLIERE 360
Query: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
++EI KLLD+ A+LD ++ EFE+E+EQ R+SLDEEL+ K AE+E+ + EI H EEK+ K
Sbjct: 361 QMEIGKLLDDQKAVLDSRRREFEMELEQMRRSLDEELEGKKAEIEQLQVEISHKEEKLAK 420
Query: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
RE ALEK+ E +K KE D D + K +K++EK++++EEK + E ++LL DKE L LK E
Sbjct: 421 REAALEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKKLHMENERLLEDKECLRKLKDE 480
Query: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
+E+I E Q ++REE SL +++ ER +F RLQSELKQ+I+ + ++ELLLKE E+L
Sbjct: 481 IEEIGTETTKQESRIREEHESLRITKEERVEFLRLQSELKQQIDKVKQEEELLLKEREEL 540
Query: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRRE 600
KQ +E FE+EWE LD KRA + +EQ + + EK SE+ RLK E + + + ++RE
Sbjct: 541 KQDKERFEKEWEALDKKRANITREQNEVAEENEKLRNLQISEKHRLKREEMTSRDNLKRE 600
Query: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
+ +K+ KESF A ME D E+QKR L+ Q + + ER+F
Sbjct: 601 LDGVKMQKESFEADME-------------------DLEMQKRNLDMEFQRQEEAGERDFN 660
Query: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIR 720
E+ + +++ + EL+NINY + +A++EM++++ E+L E+ER++ V K+ L+ Q E+
Sbjct: 661 ERARTYEKRSQEELDNINYTKKLAQREMEEMQYEKLALEREREQISVRKKLLKEQEAEMH 720
Query: 721 KDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN 780
KDI EL L + LK++R+ + ER+RF+ F++K +SC +CGEIT FVLSDL L +E+
Sbjct: 721 KDITELDVLRSSLKEKRKEFICERERFLVFLEKLKSCSSCGEITENFVLSDL-RLPDVED 780
Query: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSP-GK--KI 840
D+ Q L+ L P + S T S L K SK+ SP GK K+
Sbjct: 781 G------DKRFGKQKLKAEEALN---ISPSAENSKRT-SLLGKIASKLLSISPIGKTDKV 840
Query: 841 TSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREV 900
T + I K ++P DSLD +SG +
Sbjct: 841 T---------DLGITVKLPESSQP------------------DDSLD------RVSGEDH 900
Query: 901 EPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTK-ISRTRSVLAVVEDA 960
EP S +QS +S+ E P S S+++ + +PR+G+ + R +SV +
Sbjct: 901 EP----SATEQSFTDSRIQEGPEGSLQSEMKSD----KPRRGRGRGRGRGKSVRGRSQAT 960
Query: 961 KAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFM-GE 1020
KA+ + DS + E T RKR R +S+ E
Sbjct: 961 KAV----------------SRDSKPSDGE--------------TPRKRQREQTSRITESE 1020
Query: 1021 NDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTP-EKRYNLRPSKVGAAAKGPSQVSKEIGE 1080
DS+ S+ G RK+RQ AV QTP + RY LR + + +Q SK G
Sbjct: 1021 QAAGDSDEGVDSITTGGRRKKRQIAVPVSQTPGQTRYQLRRHRNVGTEEDKAQASK--GA 1080
Query: 1081 DAPVKRTEEDAH---YSKALPTPSMGVTSDNAGSAHLV------RCRTVGDNQDDGIAGT 1140
+R +D K TP G +N + LV TV + T
Sbjct: 1081 TEKQERVNDDIRKVPSPKETRTPPEGENRENGKAEVLVETVTHEEIVTVETETVFKVNNT 1085
Query: 1141 SKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEHPG-EASIG 1186
KN ++ + EV G+ E+ GE E+ ++ +E+ +++EE E G +ASIG
Sbjct: 1141 GKNPVEDPQL--EVGGSGEIR----EHGEEDDENISMIEEENEGEEEEETERQGNDASIG 1085
BLAST of MS003319 vs. ExPASy TrEMBL
Match:
A0A6J1BZ66 (protein CROWDED NUCLEI 1 OS=Momordica charantia OX=3673 GN=LOC111006029 PE=3 SV=1)
HSP 1 Score: 2118.2 bits (5487), Expect = 0.0e+00
Identity = 1176/1195 (98.41%), Postives = 1180/1195 (98.74%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR
Sbjct: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
Query: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA
Sbjct: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
Query: 121 KDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
KDTLKREQMAHMIAISD+EKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK
Sbjct: 121 KDTLKREQMAHMIAISDSEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
Query: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF
Sbjct: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
Query: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL
Sbjct: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
Query: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEEKLSARE 360
EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ ++KEKELLALEEKLSARE
Sbjct: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQESDALKVTLEMKEKELLALEEKLSARE 360
Query: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK
Sbjct: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
Query: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE
Sbjct: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
Query: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL
Sbjct: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
Query: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRRE 600
KQQRETFEREWEDLDDKRAQVEKEQKALMLQKE+FEKRTFSEEERLKNERLATENYIRRE
Sbjct: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEEFEKRTFSEEERLKNERLATENYIRRE 600
Query: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR
Sbjct: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
Query: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIR 720
EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAE NKEHLERQGIEIR
Sbjct: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEANKEHLERQGIEIR 720
Query: 721 KDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN 780
KDIEELLELSNKLKDQRER VRERDRFISFVDKHRSCKNCGEI SEFVLSDLHHLDGIEN
Sbjct: 721 KDIEELLELSNKLKDQRERXVRERDRFISFVDKHRSCKNCGEIASEFVLSDLHHLDGIEN 780
Query: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP 840
AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP
Sbjct: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP 840
Query: 841 AFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPS 900
AFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPS
Sbjct: 841 AFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPS 900
Query: 901 QNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTKISRTRSVLAVVEDAKAII 960
QNLSTDDQSNINSKAPEVPVDSQPSDLRGNQ GLRPRKGKTKISRTRSVLAVVEDAKAII
Sbjct: 901 QNLSTDDQSNINSKAPEVPVDSQPSDLRGNQRGLRPRKGKTKISRTRSVLAVVEDAKAII 960
Query: 961 GELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDD 1020
GELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDD
Sbjct: 961 GELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDD 1020
Query: 1021 SEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKR 1080
SEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKR
Sbjct: 1021 SEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKR 1080
Query: 1081 TEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVN 1140
TEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVN
Sbjct: 1081 TEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVN 1140
Query: 1141 GTPEVAGKYGNRGEYKSESCEVVGDEDG--DDDDEEAEHPGEASIGKKLWTFFTT 1186
GTPEVAGKYGNRGEYKSESCEVVGDEDG DDDDEEAEHPGEASIGKKLWTFFTT
Sbjct: 1141 GTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDDDEEAEHPGEASIGKKLWTFFTT 1195
BLAST of MS003319 vs. ExPASy TrEMBL
Match:
E5GCT1 (Nuclear matrix constituent-like protein 1 OS=Cucumis melo subsp. melo OX=412675 PE=3 SV=1)
HSP 1 Score: 1766.5 bits (4574), Expect = 0.0e+00
Identity = 999/1207 (82.77%), Postives = 1082/1207 (89.64%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSV------TPLSD 60
MFTPQ+V SGWPLTPKTG QK GAGSA+NP+SVTP+LSRRGDGIKGK+V TPLS
Sbjct: 1 MFTPQKVWSGWPLTPKTGAQKTGAGSASNPNSVTPNLSRRGDGIKGKTVAFGETTTPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
+LVEN EMFVGSAEAAALDQEGL EKIS+LENELFEYQYNMGLLLIEKKDWT KYEEL
Sbjct: 61 ALVENGGEMFVGSAEAAALDQEGLDEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L E KDTLKREQMAHMIA+SDAEK+EENLKKALGVEKECVLDLEKALREMRAENAEIK
Sbjct: 121 QALAETKDTLKREQMAHMIAMSDAEKQEENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALVTSIEEKSLEVEA+LRAADAKLAEVSRKNSEVERKLQDLEAREGALR
Sbjct: 181 FTGDSKLAEANALVTSIEEKSLEVEARLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAERE+HEATL+KQRDDLREWE++LQDAEERLAKGQTI+NQREERANENDRMVK
Sbjct: 241 RDRLSFNAERESHEATLSKQRDDLREWERKLQDAEERLAKGQTILNQREERANENDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQAKIKEKELLALEEKLSARERV 360
QKEKDLEE+QKKIDS+ L LKRKEEDI SRLA IALKEQAKIKEKELL LEEKL+ARE+V
Sbjct: 301 QKEKDLEELQKKIDSSNLALKRKEEDIGSRLANIALKEQAKIKEKELLVLEEKLTAREKV 360
Query: 361 EIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGKRE 420
EIQ+LLDEHNAILD KK+EFELEI+QKRKSLDEELK K +EVEKKEAEIKHMEEK+GKRE
Sbjct: 361 EIQQLLDEHNAILDAKKIEFELEIDQKRKSLDEELKNKVSEVEKKEAEIKHMEEKLGKRE 420
Query: 421 QALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAEVE 480
QALEKRTEK K+KEADYD KFKALKQREKS++ EEKN+EAE+KQLL D E+LI LKAEVE
Sbjct: 421 QALEKRTEKFKEKEADYDAKFKALKQREKSLKLEEKNLEAEKKQLLADTEELICLKAEVE 480
Query: 481 KIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDLKQ 540
KIRAENEAQLLKL EER SL+VSE+ERSDF RLQSELKQEIE YR QKELLLKEAEDLKQ
Sbjct: 481 KIRAENEAQLLKLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLLKEAEDLKQ 540
Query: 541 QRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRREQE 600
Q+ETFEREWE+LD+KRAQVEKEQK L+LQKE+FEKR FSEEERLKNER TE YI REQE
Sbjct: 541 QKETFEREWEELDEKRAQVEKEQKTLLLQKEEFEKRIFSEEERLKNERSETEAYIHREQE 600
Query: 601 DLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFREK 660
+LKL +ESFAASMEHEKSAIAEKAQS+RSQM+HDF+LQKRELESAMQNRV+EMER FREK
Sbjct: 601 NLKLAQESFAASMEHEKSAIAEKAQSDRSQMMHDFDLQKRELESAMQNRVEEMERGFREK 660
Query: 661 EKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIRKD 720
EKLFKEE+ERELENI +LRD+AR+EMD+LKLERLKTEKE+QEAE NKEHLERQ IEIRKD
Sbjct: 661 EKLFKEEKERELENIKFLRDVARREMDELKLERLKTEKEKQEAEANKEHLERQRIEIRKD 720
Query: 721 IEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIENAG 780
IEELLELSNKLKDQRERLV ERDRFIS+ DKHR+CKNCGEI SEFVLSDL LDG ENA
Sbjct: 721 IEELLELSNKLKDQRERLVAERDRFISYADKHRTCKNCGEIASEFVLSDLQSLDGFENAD 780
Query: 781 VLN---LPDRYLEFQGLQ------------RNGELTPGVAGPKSPISGGTISWLRKCTSK 840
VLN LPD+Y+E QGLQ RNGELTPG+AG KSPIS GTISWLRKCTSK
Sbjct: 781 VLNLPGLPDKYMEIQGLQVSSGGNMGISDVRNGELTPGLAGQKSPISAGTISWLRKCTSK 840
Query: 841 IFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKR 900
IFKFSPGKKI SPAFE+ D EA + D+HD+ AEPSKR+SA EDEAELSLAIASDSLDD+R
Sbjct: 841 IFKFSPGKKIASPAFEKQDDEAPVSDEHDDLAEPSKRMSAGEDEAELSLAIASDSLDDRR 900
Query: 901 IQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTKISRTR 960
IQSD+SGR+VEPSQNLS D+QSNI SKAPEV VDSQPSD+R N+ RP++GK KI+RTR
Sbjct: 901 IQSDVSGRDVEPSQNLSIDNQSNIISKAPEVAVDSQPSDVRENK-RQRPKRGKPKINRTR 960
Query: 961 SVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRA 1020
SV AVVEDAKAIIGEL T Q EYPNGNAEDSSQLNNESRDESSLA KGTQR +RKRTRA
Sbjct: 961 SVKAVVEDAKAIIGELQSTQQAEYPNGNAEDSSQLNNESRDESSLAGKGTQRNLRKRTRA 1020
Query: 1021 NSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVGAAAKGPSQ 1080
NSS+ MGEND DDSEVRSGSVVEGQPRKRRQ+A AV+ PEKRYNLR VG A+K PS
Sbjct: 1021 NSSQIMGENDHDDSEVRSGSVVEGQPRKRRQKAAPAVRAPEKRYNLRRKVVG-ASKEPSN 1080
Query: 1081 VSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSK 1140
VSKE+ EDA VKRTEED HYS+ PT SMGV SDNAGS HLVRC TV DNQDDG+AGTSK
Sbjct: 1081 VSKELEEDATVKRTEEDVHYSRVRPTQSMGVASDNAGSTHLVRCGTVQDNQDDGVAGTSK 1140
Query: 1141 NSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDD-EEAEHPGEASIGKK 1186
SID+VS SEEVNG+PE AGKY ++GEY+SESCE VG+ED DDDD EE+ HPGE SIGKK
Sbjct: 1141 ISIDMVSQSEEVNGSPENAGKYEDQGEYRSESCEEVGNEDDDDDDEEESAHPGEVSIGKK 1200
BLAST of MS003319 vs. ExPASy TrEMBL
Match:
A0A1S3CA47 (protein CROWDED NUCLEI 1 OS=Cucumis melo OX=3656 GN=LOC103498563 PE=3 SV=1)
HSP 1 Score: 1755.7 bits (4546), Expect = 0.0e+00
Identity = 997/1215 (82.06%), Postives = 1081/1215 (88.97%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSV------TPLSD 60
MFTPQ+V SGWPLTPKTG QK GAGSA+NP+SVTP+LSRRGDGIKGK+V TPLS
Sbjct: 1 MFTPQKVWSGWPLTPKTGAQKTGAGSASNPNSVTPNLSRRGDGIKGKTVAFGETTTPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
+LVEN EMFVGSAEAAALDQEGL EKIS+LENELFEYQYNMGLLLIEKKDWT KYEEL
Sbjct: 61 ALVENGGEMFVGSAEAAALDQEGLDEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L E KDTLKREQMAHMIA+SDAEK+EENLKKALGVEKECVLDLEKALREMRAENAEIK
Sbjct: 121 QALAETKDTLKREQMAHMIAMSDAEKQEENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALVTSIEEKSLEVEA+LRAADAKLAEVSRKNSEVERKLQDLEAREGALR
Sbjct: 181 FTGDSKLAEANALVTSIEEKSLEVEARLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAERE+HEATL+KQRDDLREWE++LQDAEERLAKGQTI+NQREERANENDRMVK
Sbjct: 241 RDRLSFNAERESHEATLSKQRDDLREWERKLQDAEERLAKGQTILNQREERANENDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEE 360
QKEKDLEE+QKKIDS+ L LKRKEEDI SRLA IALKEQ +IKEKELL LEE
Sbjct: 301 QKEKDLEELQKKIDSSNLALKRKEEDIGSRLANIALKEQESDSLKVSLEIKEKELLVLEE 360
Query: 361 KLSARERVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHM 420
KL+ARE+VEIQ+LLDEHNAILD KK+EFELEI+QKRKSLDEELK K +EVEKKEAEIKHM
Sbjct: 361 KLTAREKVEIQQLLDEHNAILDAKKIEFELEIDQKRKSLDEELKNKVSEVEKKEAEIKHM 420
Query: 421 EEKVGKREQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDL 480
EEK+GKREQALEKRTEK K+KEADYD KFKALKQREKS++ EEKN+EAE+KQLL D E+L
Sbjct: 421 EEKLGKREQALEKRTEKFKEKEADYDAKFKALKQREKSLKLEEKNLEAEKKQLLADTEEL 480
Query: 481 ISLKAEVEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLL 540
I LKAEVEKIRAENEAQLLKL EER SL+VSE+ERSDF RLQSELKQEIE YR QKELLL
Sbjct: 481 ICLKAEVEKIRAENEAQLLKLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLL 540
Query: 541 KEAEDLKQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATE 600
KEAEDLKQQ+ETFEREWE+LD+KRAQVEKEQK L+LQKE+FEKR FSEEERLKNER TE
Sbjct: 541 KEAEDLKQQKETFEREWEELDEKRAQVEKEQKTLLLQKEEFEKRIFSEEERLKNERSETE 600
Query: 601 NYIRREQEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDE 660
YI REQE+LKL +ESFAASMEHEKSAIAEKAQS+RSQM+HDF+LQKRELESAMQNRV+E
Sbjct: 601 AYIHREQENLKLAQESFAASMEHEKSAIAEKAQSDRSQMMHDFDLQKRELESAMQNRVEE 660
Query: 661 MEREFREKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLER 720
MER FREKEKLFKEE+ERELENI +LRD+AR+EMD+LKLERLKTEKE+QEAE NKEHLER
Sbjct: 661 MERGFREKEKLFKEEKERELENIKFLRDVARREMDELKLERLKTEKEKQEAEANKEHLER 720
Query: 721 QGIEIRKDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHH 780
Q IEIRKDIEELLELSNKLKDQRERLV ERDRFIS+ DKHR+CKNCGEI SEFVLSDL
Sbjct: 721 QRIEIRKDIEELLELSNKLKDQRERLVAERDRFISYADKHRTCKNCGEIASEFVLSDLQS 780
Query: 781 LDGIENAGVLN---LPDRYLEFQGLQ------------RNGELTPGVAGPKSPISGGTIS 840
LDG ENA VLN LPD+Y+E QGLQ RNGELTPG+AG KSPIS GTIS
Sbjct: 781 LDGFENADVLNLPGLPDKYMEIQGLQVSSGGNMGISDVRNGELTPGLAGQKSPISAGTIS 840
Query: 841 WLRKCTSKIFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIA 900
WLRKCTSKIFKFSPGKKI SPAFE+ D EA + D+HD+ AEPSKR+SA EDEAELSLAIA
Sbjct: 841 WLRKCTSKIFKFSPGKKIASPAFEKQDDEAPVSDEHDDLAEPSKRMSAGEDEAELSLAIA 900
Query: 901 SDSLDDKRIQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKG 960
SDSLDD+RIQSD+SGR+VEPSQNLS D+QSNI SKAPEV VDSQPSD+R N+ RP++G
Sbjct: 901 SDSLDDRRIQSDVSGRDVEPSQNLSIDNQSNIISKAPEVAVDSQPSDVRENK-RQRPKRG 960
Query: 961 KTKISRTRSVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQR 1020
K KI+RTRSV AVVEDAKAIIGEL T Q EYPNGNAEDSSQLNNESRDESSLA KGTQR
Sbjct: 961 KPKINRTRSVKAVVEDAKAIIGELQSTQQAEYPNGNAEDSSQLNNESRDESSLAGKGTQR 1020
Query: 1021 TVRKRTRANSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSKVG 1080
+RKRTRANSS+ MGEND DDSEVRSGSVVEGQPRKRRQ+A AV+ PEKRYNLR VG
Sbjct: 1021 NLRKRTRANSSQIMGENDHDDSEVRSGSVVEGQPRKRRQKAAPAVRAPEKRYNLRRKVVG 1080
Query: 1081 AAAKGPSQVSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQD 1140
A+K PS VSKE+ EDA VKRTEED HYS+ PT SMGV SDNAGS HLVRC TV DNQD
Sbjct: 1081 -ASKEPSNVSKELEEDATVKRTEEDVHYSRVRPTQSMGVASDNAGSTHLVRCGTVQDNQD 1140
Query: 1141 DGIAGTSKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDD-EEAEHP 1186
DG+AGTSK SID+VS SEEVNG+PE AGKY ++GEY+SESCE VG+ED DDDD EE+ HP
Sbjct: 1141 DGVAGTSKISIDMVSQSEEVNGSPENAGKYEDQGEYRSESCEEVGNEDDDDDDEEESAHP 1200
BLAST of MS003319 vs. ExPASy TrEMBL
Match:
A0A0A0KXP5 (DNA double-strand break repair rad50 ATPase OS=Cucumis sativus OX=3659 GN=Csa_5G643940 PE=3 SV=1)
HSP 1 Score: 1749.6 bits (4530), Expect = 0.0e+00
Identity = 993/1216 (81.66%), Postives = 1076/1216 (88.49%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSV------TPLSD 60
MFTPQ+V SGWPLTPKTG QK GAGSA+NP+SVTP+LSR+GDGIKGK+V TPLS
Sbjct: 1 MFTPQKVWSGWPLTPKTGAQKTGAGSASNPNSVTPNLSRKGDGIKGKTVAFGETTTPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
+LVEN EMFVGSAEAAALDQEGLAEKIS+LENELFEYQYNMGLLLIEKKDWT KYEEL
Sbjct: 61 ALVENGGEMFVGSAEAAALDQEGLAEKISRLENELFEYQYNMGLLLIEKKDWTLKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L E KDTLKREQMAHMIAISDAEK+EENLKKALGVEKECVLDLEKALREMRAENAEIK
Sbjct: 121 QALAETKDTLKREQMAHMIAISDAEKQEENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALVTSIEEKSLEVEA+LRAADAKLAEVSRKNSEVERKLQDLEAREGALR
Sbjct: 181 FTGDSKLAEANALVTSIEEKSLEVEARLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAERE+HEATL+KQRDDLREWE++LQDAEERLAKGQTI+NQREERANE+DRMVK
Sbjct: 241 RDRLSFNAERESHEATLSKQRDDLREWERKLQDAEERLAKGQTILNQREERANESDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEE 360
QKEKDLEE+QKKIDS+ L LKRKEEDI SRLA IALKEQ +IKEKELL LEE
Sbjct: 301 QKEKDLEELQKKIDSSNLALKRKEEDIGSRLANIALKEQESDSLKVSLEIKEKELLVLEE 360
Query: 361 KLSARERVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHM 420
KLSARE+VEIQKLLDEHNAILD KK+EFELEI+QKRKSLDEELK K +EVEKKEAEIKHM
Sbjct: 361 KLSAREKVEIQKLLDEHNAILDAKKIEFELEIDQKRKSLDEELKSKVSEVEKKEAEIKHM 420
Query: 421 EEKVGKREQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDL 480
EEKVGKREQALEKRTEK K+KE DYD KFKALKQREKS++ EEKN+EAE+KQLL D E+L
Sbjct: 421 EEKVGKREQALEKRTEKFKEKEGDYDAKFKALKQREKSLKLEEKNLEAEKKQLLADTEEL 480
Query: 481 ISLKAEVEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLL 540
ISLKAEVEKIRAENEAQLLKL EER SL+VSE+ERSDF RLQSELKQEIE YR QKELLL
Sbjct: 481 ISLKAEVEKIRAENEAQLLKLHEERESLKVSETERSDFLRLQSELKQEIEKYRQQKELLL 540
Query: 541 KEAEDLKQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATE 600
KEAEDLKQQ+ETFEREWE+LD+KRAQVEKEQK L+LQKE+FEKR FSEEERLK+ERL TE
Sbjct: 541 KEAEDLKQQKETFEREWEELDEKRAQVEKEQKTLLLQKEEFEKRIFSEEERLKSERLETE 600
Query: 601 NYIRREQEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDE 660
YI REQE+LKL +ESFAASMEHEKSAIAEKAQS+RSQM+HDF+LQKRELESAMQNRV+E
Sbjct: 601 AYIHREQENLKLAQESFAASMEHEKSAIAEKAQSDRSQMMHDFDLQKRELESAMQNRVEE 660
Query: 661 MEREFREKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLER 720
MER FREK+KLFKEE+ERELENI +LRD+AR+EMD+LKLERLKTEKERQEAE NKEHLER
Sbjct: 661 MERGFREKDKLFKEEKERELENIKFLRDVARREMDELKLERLKTEKERQEAEANKEHLER 720
Query: 721 QGIEIRKDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHH 780
Q IEIRKDIEELLELSNKLKDQRERLV ERDRFIS+VDKH +CKNCGEI SEFVLSDL +
Sbjct: 721 QRIEIRKDIEELLELSNKLKDQRERLVAERDRFISYVDKHVTCKNCGEIASEFVLSDLQY 780
Query: 781 LDGIENAGVLN---LPDRYLEFQGLQ--------------RNGELTPGVAGPKSPISGGT 840
LDG ENA VLN LPD+Y+E QGLQ +NGELTPG AG KSPIS GT
Sbjct: 781 LDGFENADVLNLPGLPDKYMEIQGLQVSVSPGGNLGISDVKNGELTPGGAGQKSPISAGT 840
Query: 841 ISWLRKCTSKIFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLA 900
ISWLRKCTSKIFKFSPGKKI SPAFE+ D EA + D+HD+ AEPSKR+S EDE ELSLA
Sbjct: 841 ISWLRKCTSKIFKFSPGKKIVSPAFEKQDDEAPVSDEHDDLAEPSKRMSVGEDEVELSLA 900
Query: 901 IASDSLDDKRIQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPR 960
IASDSLDD+RIQSD+SGR+VEPSQNLS D+QSNI SK PEV VDSQPSD+R N+ RP+
Sbjct: 901 IASDSLDDRRIQSDVSGRDVEPSQNLSIDNQSNIVSKVPEVAVDSQPSDVRENK--KRPK 960
Query: 961 KGKTKISRTRSVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGT 1020
+GK KI+RTRSV AVVEDAKAIIGEL T Q EYPNGNAEDSSQLNNESRDESSLA KGT
Sbjct: 961 RGKPKINRTRSVKAVVEDAKAIIGELQPTQQAEYPNGNAEDSSQLNNESRDESSLAGKGT 1020
Query: 1021 QRTVRKRTRANSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSK 1080
QR +RKRTRANSS+ MGEND DDSEVRSGSVVEGQPRKRRQRA AV+ PEKRYNLR
Sbjct: 1021 QRNLRKRTRANSSQIMGENDHDDSEVRSGSVVEGQPRKRRQRAAPAVRAPEKRYNLRRKV 1080
Query: 1081 VGAAAKGPSQVSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDN 1140
VG A+K PS +SKE E V R EED HYS+ PTPSMGV SDNAGSAHLVRC TV DN
Sbjct: 1081 VG-ASKEPSNISKEHEEVGTVNRREEDVHYSRVRPTPSMGVASDNAGSAHLVRCGTVQDN 1140
Query: 1141 QDDGIAGTSKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEH 1186
QDDG+AGTSK SID+VS SEEVNG+PE AGKY + GEY+SESCE VG+ED DDD+EE+ H
Sbjct: 1141 QDDGVAGTSKISIDMVSQSEEVNGSPENAGKYEDHGEYRSESCEEVGNEDDDDDEEESAH 1200
BLAST of MS003319 vs. ExPASy TrEMBL
Match:
A0A6J1JVM2 (protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489283 PE=3 SV=1)
HSP 1 Score: 1723.0 bits (4461), Expect = 0.0e+00
Identity = 984/1216 (80.92%), Postives = 1068/1216 (87.83%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGK------SVTPLSD 60
MFTPQ+ SGWPLTPKTG QKGGAGSA+NP+SVTPSLSRRGDGIKGK + TPLS
Sbjct: 1 MFTPQKAWSGWPLTPKTGAQKGGAGSASNPNSVTPSLSRRGDGIKGKTAAFGETATPLSG 60
Query: 61 SLVENRAEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELS 120
++VEN MFVGSAEAAALDQEG AEKIS+LENELFEYQYNMGLLLIEKKDW KYEEL
Sbjct: 61 TVVENGRNMFVGSAEAAALDQEGFAEKISRLENELFEYQYNMGLLLIEKKDWALKYEELK 120
Query: 121 QGLVEAKDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIK 180
Q L EA DT+KREQMAHMIAISDAEK+EE+LKKALGVEKECVLDLEKALREMRAENAEIK
Sbjct: 121 QALAEANDTIKREQMAHMIAISDAEKQEESLKKALGVEKECVLDLEKALREMRAENAEIK 180
Query: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALR 240
FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGA R
Sbjct: 181 FTGDSKLAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGAFR 240
Query: 241 RDRLSFNAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVK 300
RDRLSFNAEREA EATL+KQRDDLREWE++ QDAEERLAKGQTI+NQREERANENDRMVK
Sbjct: 241 RDRLSFNAEREALEATLSKQRDDLREWERKQQDAEERLAKGQTILNQREERANENDRMVK 300
Query: 301 QKEKDLEEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEE 360
QKE+DLEE QKKI+SA L LKRKEEDISSRLA IALKEQ +IKEKELL LEE
Sbjct: 301 QKERDLEETQKKIESANLALKRKEEDISSRLANIALKEQESDALKVTLEIKEKELLVLEE 360
Query: 361 KLSARERVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHM 420
KLSARE+V IQKLLDEHNAILD KKVEFELEI+QKRKSLDEELK K +EVEKKEAEIKHM
Sbjct: 361 KLSAREKVGIQKLLDEHNAILDAKKVEFELEIDQKRKSLDEELKNKVSEVEKKEAEIKHM 420
Query: 421 EEKVGKREQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDL 480
EEKV KREQALEKRTEK K+KEADYDTK KALK+REKS+++EEK +EAE+KQLLTDKEDL
Sbjct: 421 EEKVAKREQALEKRTEKFKEKEADYDTKLKALKEREKSMKTEEKKLEAEKKQLLTDKEDL 480
Query: 481 ISLKAEVEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLL 540
ISL AEVE IRAENEAQLLKL EE+ SL+VSE+E+SDF RLQSELKQEIE YR QKELLL
Sbjct: 481 ISLMAEVENIRAENEAQLLKLHEEKESLKVSETEKSDFLRLQSELKQEIEKYREQKELLL 540
Query: 541 KEAEDLKQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATE 600
KEAEDLKQQ+ETFEREWE+LD+KRAQVEKEQK L+ QKE+FEKR F+EEERL+NER TE
Sbjct: 541 KEAEDLKQQKETFEREWEELDEKRAQVEKEQKTLLQQKEEFEKRIFAEEERLRNERSETE 600
Query: 601 NYIRREQEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDE 660
YI REQEDLKL +ESFAASMEHEKSAIAEKAQS+RSQM+HDFELQKRELES+MQNRV+E
Sbjct: 601 AYIHREQEDLKLARESFAASMEHEKSAIAEKAQSDRSQMMHDFELQKRELESSMQNRVEE 660
Query: 661 MEREFREKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLER 720
MEREFREKEKLFKEE+ERELENI +LRD+AR++M++LKLERLKT+KE+QEAE NKEHLE+
Sbjct: 661 MEREFREKEKLFKEEKERELENIKFLRDVARRDMEELKLERLKTDKEKQEAEANKEHLEK 720
Query: 721 QGIEIRKDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHH 780
Q IEIRKDIEELLELSNKLK QRE+LV ERDRFIS+VDK +CKNCGE SEFVLSDL
Sbjct: 721 QRIEIRKDIEELLELSNKLKSQREQLVEERDRFISYVDKLMTCKNCGETASEFVLSDLQS 780
Query: 781 LDGIENAGVLN---LPDRYLEFQGLQ------------RNGELTPGVAGPKSPISGGTIS 840
L GIENA VLN LPDRY+E QGL RNGELTPGVAGP S S GTIS
Sbjct: 781 LGGIENADVLNLPGLPDRYMEIQGLHVSPGGTLGTSDVRNGELTPGVAGPTSHTSSGTIS 840
Query: 841 WLRKCTSKIFKFSPGKKITSPAFE-EVDGEASILDKHDNRAEPSKRISAVEDEAELSLAI 900
WLRKCTSKIFKFSPGKKI SPAFE + D EA I D+HD AEPSKR+SA E+EAELSLAI
Sbjct: 841 WLRKCTSKIFKFSPGKKIASPAFEKQDDDEAPISDEHDVPAEPSKRVSASEEEAELSLAI 900
Query: 901 ASDSLDDKRIQSDISGREVEPSQNLSTDDQSNINSKAPEVPVDSQPSDLR-GNQWGLRPR 960
ASDSLDDKR+QSD+SGREVEPS NLSTDDQSN+NSKAPEV VDSQPSD R NQ LRPR
Sbjct: 901 ASDSLDDKRVQSDVSGREVEPSLNLSTDDQSNVNSKAPEVAVDSQPSDTRVVNQRKLRPR 960
Query: 961 KGKTKISRTRSVLAVVEDAKAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGT 1020
+ K KISRTRSV AVVE++KAII EL QT VEYPNGNAEDSSQLNNESRDESSLA KGT
Sbjct: 961 REKPKISRTRSVKAVVEESKAIIVELQQTQLVEYPNGNAEDSSQLNNESRDESSLAGKGT 1020
Query: 1021 QRTVRKRTRANSSKFMGENDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTPEKRYNLRPSK 1080
+R +RKRT ANSS+ MGEND+DDSEVRSGS VEGQPRKRRQRAV AV+ PEKRYNLR +K
Sbjct: 1021 RRNLRKRTHANSSQIMGENDNDDSEVRSGSAVEGQPRKRRQRAVPAVRAPEKRYNLRRTK 1080
Query: 1081 VGAAAKGPSQVSKEIGEDAPVKRTEEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDN 1140
A+K PS +SK EDAPV RTEED HYSKA PTPSMGV SDNAGS +LVRC TVGDN
Sbjct: 1081 AAGASKDPSNISKGNEEDAPVNRTEEDVHYSKARPTPSMGVASDNAGSTYLVRCGTVGDN 1140
Query: 1141 QDDGIAGTSKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEH 1186
QD IAGTSKNS D+VS+SEEVNG+PE+AGKYG+RG+YKSESC DED DDD+EE+EH
Sbjct: 1141 QDVTIAGTSKNSTDMVSLSEEVNGSPEIAGKYGDRGKYKSESC----DEDEDDDEEESEH 1200
BLAST of MS003319 vs. TAIR 10
Match:
AT1G67230.1 (little nuclei1 )
HSP 1 Score: 869.0 bits (2244), Expect = 4.4e-252
Identity = 576/1201 (47.96%), Postives = 804/1201 (66.94%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
M TP +V W K A NP S + S G G+ VTP+S + E +
Sbjct: 1 MSTPLKVWQRWSTPTK----------ATNPDS---NGSSHGTGL--DMVTPVSGRVSEIQ 60
Query: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
+ D L EKIS+LE ELFEYQ++MGLLLIEKK+W+S+YE L Q E
Sbjct: 61 FD-----------DPRILPEKISELEKELFEYQHSMGLLLIEKKEWSSQYEALQQAFEEV 120
Query: 121 KDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
+ LK+E+ AH+IAI+D EKREE L+KALG+EK+C LDLEKAL+E+RAENAEIKFT DSK
Sbjct: 121 NECLKQERNAHLIAIADVEKREEGLRKALGIEKQCALDLEKALKELRAENAEIKFTADSK 180
Query: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
L EANALV S+EEKSLEVEAKLRA DAKLAEVSRK+S+VERK +++EARE +L+R+R S+
Sbjct: 181 LTEANALVRSVEEKSLEVEAKLRAVDAKLAEVSRKSSDVERKAKEVEARESSLQRERFSY 240
Query: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
AEREA EATL+KQR+DLREWE++LQ+ EER+AK Q I+ QRE+RANE+D+++KQK K+L
Sbjct: 241 IAEREADEATLSKQREDLREWERKLQEGEERVAKSQMIVKQREDRANESDKIIKQKGKEL 300
Query: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKEQ--------AKIKEKELLALEEKLSARE 360
EE QKKID+A L +K+ E+D+SSR+ +AL+EQ + K +EL AL+EKL ARE
Sbjct: 301 EEAQKKIDAANLAVKKLEDDVSSRIKDLALREQETDVLKKSIETKARELQALQEKLEARE 360
Query: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
++ +Q+L+DEH A LD + EFELE+EQKRKS+D+ LK K AEVEK+EAE KHMEEKV K
Sbjct: 361 KMAVQQLVDEHQAKLDSTQREFELEMEQKRKSIDDSLKSKVAEVEKREAEWKHMEEKVAK 420
Query: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
REQAL+++ EK K+KE D+D + K + REK+++SEEK +E E+K+LL DKE +++LKA
Sbjct: 421 REQALDRKLEKHKEKENDFDLRLKGISGREKALKSEEKALETEKKKLLEDKEIILNLKAL 480
Query: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
VEK+ EN+AQL ++ +E++ L V+E ERS++ RLQ+ELK++IE R Q+ELL KEAEDL
Sbjct: 481 VEKVSGENQAQLSEINKEKDELRVTEEERSEYLRLQTELKEQIEKCRSQQELLQKEAEDL 540
Query: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRRE 600
K QRE+FE+EWE+LD+++A++ E K + QKEK E+ EEERLK E+ A + RE
Sbjct: 541 KAQRESFEKEWEELDERKAKIGNELKNITDQKEKLERHIHLEEERLKKEKQAANENMERE 600
Query: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
E L++ K SFA +ME+E+S +++KA+SERSQ+LHD E++KR+LES MQ ++E ERE +
Sbjct: 601 LETLEVAKASFAETMEYERSMLSKKAESERSQLLHDIEMRKRKLESDMQTILEEKERELQ 660
Query: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIR 720
K+KLF+EE+E+EL NINYLRD+AR+EM D++ ER + EKE+ E + +K HLE Q EIR
Sbjct: 661 AKKKLFEEEREKELSNINYLRDVARREMMDMQNERQRIEKEKLEVDSSKNHLEEQQTEIR 720
Query: 721 KDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN 780
KD+++L+ L+ KLK+QRE+ + ER RF+S ++ +R+C CGE+ SE VL ++ +L+
Sbjct: 721 KDVDDLVALTKKLKEQREQFISERSRFLSSMESNRNCSRCGELLSELVLPEIDNLEMPNM 780
Query: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSPGKKITSP 840
+ + N+ D Q ++ +++P AG P++GG +SW RKCTSK+ K SP K+T P
Sbjct: 781 SKLANILDNEAPRQEMR---DISPTAAGLGLPVTGGKVSWFRKCTSKMLKLSP-IKMTEP 840
Query: 841 A--FEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVE 900
+ + D E ++ N PS + A + S D ++ +S+ +EVE
Sbjct: 841 SVTWNLADQEPQSTEQ-ANVGGPSTTVQAA----------TTYSFDVQKAESETGTKEVE 900
Query: 901 PSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTKISRTRSVLAVVEDAKA 960
+ S DQS+INSKA EV DS S+L + KGK + RTRSV VV+DAKA
Sbjct: 901 VTNVNSDGDQSDINSKAQEVAADSL-SNLDVDGQSRMKGKGKARTRRTRSVKDVVDDAKA 960
Query: 961 IIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSK-FMGEND 1020
+ GE ++ PN + E+ S E+ +DK + RKR R S + E D
Sbjct: 961 LYGESINLYE---PNDSTENVDDSTKASTGETGRSDKAISKNGRKRGRVGSLRTCTTEQD 1020
Query: 1021 DDDSEVRSGSVVEGQPRKRRQRAVRAVQTPE---KRYNL-RPSKVGAAAKGPSQVSKEIG 1080
++S+ +S SV G +++R++ V + Q E +RYNL RP +V G +SK+
Sbjct: 1021 GNESDGKSDSVTGGAHQRKRRQKVASEQQGEVVGQRYNLRRPRRV----TGEPALSKK-N 1080
Query: 1081 EDAPVKRTEEDAHYSKALPTPSMGV-TSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDI 1140
ED + EE H ++A T S+GV SDN S ++V+ D++D AG+ K + +
Sbjct: 1081 EDIGGVQQEEGIHCTQATATASVGVAVSDNGVSTNVVQHEATADSEDTD-AGSPKRTDES 1132
Query: 1141 VSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEHPGEASIGKKLWTFFT 1186
++SE+VN TP + D DG+DD+ +AEHPG+ SIGKKLWTF T
Sbjct: 1141 EAMSEDVNKTP------------------LRADSDGEDDESDAEHPGKVSIGKKLWTFLT 1132
BLAST of MS003319 vs. TAIR 10
Match:
AT1G13220.2 (nuclear matrix constituent protein-related )
HSP 1 Score: 565.5 bits (1456), Expect = 1.0e-160
Identity = 430/1133 (37.95%), Postives = 650/1133 (57.37%), Query Frame = 0
Query: 74 DQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEAKDTLKREQMAHMI 133
DQE L EKIS LE EL+ YQ+NMGLLL+E K+ SK+E+L+Q EA++ LKREQ +H+
Sbjct: 81 DQEALLEKISTLEKELYGYQHNMGLLLMENKELVSKHEQLNQAFQEAQEILKREQSSHLY 140
Query: 134 AISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSKLAEANALVTSIEE 193
A++ E+REENL+KALG+EK+CV +LEKALRE++ EN++I+ + ++KL EANALV S+
Sbjct: 141 ALTTVEQREENLRKALGLEKQCVQELEKALREIQEENSKIRLSSEAKLVEANALVASVNG 200
Query: 194 KSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSFNAEREAHEATLAK 253
+S +VE K+ +A++KLAE +RK+SE++ +L+++E RE L+++RLSF ERE++E T K
Sbjct: 201 RSSDVENKIYSAESKLAEATRKSSELKLRLKEVETRESVLQQERLSFTKERESYEGTFQK 260
Query: 254 QRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDLEEIQKKIDSAILD 313
QR+ L EWEK+LQ EE + + + +NQREE+ NE ++ +K KEK+LEE +K+D ++
Sbjct: 261 QREYLNEWEKKLQGKEESITEQKRNLNQREEKVNEIEKKLKLKEKELEEWNRKVDLSMSK 320
Query: 314 LKRKEEDISSRLAAIALKEQAK--------IKEKELLALEEKLSARERVEIQKLLDEHNA 373
K EEDI+ RL + KE+ KE EL A EEKL ARE EIQKL+D+
Sbjct: 321 SKETEEDITKRLEELTTKEKEAHTLQITLLAKENELRAFEEKLIAREGTEIQKLIDDQKE 380
Query: 374 ILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGKREQALEKRTEKLK 433
+L K +EFELE E+ RKSLD+EL+ K E+E+++ EI H EEK+ KR QA+ K+ +++
Sbjct: 381 VLGSKMLEFELECEEIRKSLDKELQRKIEELERQKVEIDHSEEKLEKRNQAMNKKFDRVN 440
Query: 434 DKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAEVEKIRAENEAQLL 493
+KE D + K K +K+REK +++EEK + E++QLL+DKE L L+ E+EKIRAE +
Sbjct: 441 EKEMDLEAKLKTIKEREKIIQAEEKRLSLEKQQLLSDKESLEDLQQEIEKIRAEMTKKEE 500
Query: 494 KLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDLKQQRETFEREWED 553
+ EE SLE+ + ER ++ RLQSELK +IE R +E L KE E+LKQ++E FE+EWE
Sbjct: 501 MIEEECKSLEIKKEEREEYLRLQSELKSQIEKSRVHEEFLSKEVENLKQEKERFEKEWEI 560
Query: 554 LDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRREQEDLKLVKESFAA 613
LD+K+A KE+ + +KEKFE+ E ERLK E A I +E +D++L +ESF A
Sbjct: 561 LDEKQAVYNKERIRISEEKEKFERFQLLEGERLKKEESALRVQIMQELDDIRLQRESFEA 620
Query: 614 SMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFREKEKLFKEEQERE 673
+MEHE+SA+ EK + E+S+++ D E+ +R LE +Q R ++ E++ ++ F++++ E
Sbjct: 621 NMEHERSALQEKVKLEQSKVIDDLEMMRRNLEIELQERKEQDEKDLLDRMAQFEDKRMAE 680
Query: 674 LENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIRKDIEELLELSNKL 733
L +IN+ + +EM+++ +R +KE +E +K+ L+ Q +E+ DI EL LS L
Sbjct: 681 LSDINHQKQALNREMEEMMSKRSALQKESEEIAKHKDKLKEQQVEMHNDISELSTLSINL 740
Query: 734 KDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIENA-----GVLN-LP 793
K +RE RER RF++FV K + C +CG++ ++FVLSDL E A GVLN LP
Sbjct: 741 KKRREVFGRERSRFLAFVQKLKDCGSCGQLVNDFVLSDLQLPSNDEVAILPPIGVLNDLP 800
Query: 794 DRYLEFQGLQRNGELTPGVAGPKSPISGG----TISWLRKCTSKIFKFSPGKKITSPAFE 853
L +G SGG ++S L+KCTS I FSP K++
Sbjct: 801 GSSNASDSCNIKKSLDGDASG-----SGGSRRPSMSILQKCTSII--FSPSKRV------ 860
Query: 854 EVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREVEPSQNL 913
+ + +P +R+S+ S+A+ ++ +K + D+ R S ++
Sbjct: 861 ---------EHGIDTGKPEQRLSS-------SVAVGMETKGEKPLPVDLRLR--PSSSSI 920
Query: 914 STDDQSNINSKAPEVPVDSQPSDLRGNQWGL-RPRKGKTKISRTRSVLAVVEDAKAIIGE 973
+D+ +S+ E SQ S+ + ++ G RPRK K ++ T SV
Sbjct: 921 PEEDEEYTDSRVQETSEGSQLSEFQSSRRGRGRPRKAKPALNPTSSV------------- 980
Query: 974 LPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFMGENDDDDSE 1033
+ L S+DE S G K+T + DD
Sbjct: 981 ---------------KHASLEESSKDELS----GHVSVTSKKTTGGGGRKRQHIDD---- 1040
Query: 1034 VRSGSVVEGQPRKRRQRAVRAVQTP-EKRYNLRPSKVGAAAKGPSQVSKEIGEDAPVKRT 1093
G R+R+Q QTP ++ YNLR K QV ++ ++A
Sbjct: 1041 -----TATGGKRRRQQTVAVLPQTPGQRHYNLRRKKT------VDQVPADVEDNAAAGED 1100
Query: 1094 EEDAHYSKALPTPSMGVTSDNAGSAHLVRCRTVGDNQDDGIAGTSKNSIDIVSVSEEVNG 1153
+ D A PS + +R R + N D ++ + + + +V VN
Sbjct: 1101 DADI----AASAPSKDTVEETV--VETLRARRIETNA-DVVSAENNGDVPVANVEPTVNE 1128
Query: 1154 TPEVAGKYGNRGEYKSESCEVVGDEDGDD-DDEEAEHPGEASIGKKLWTFFTT 1186
G ++ E D+D DD DD+ + PGE SI KKLWTF TT
Sbjct: 1161 DTNEDGDEEEDEAQDDDNEENQDDDDDDDGDDDGSPRPGEGSIRKKLWTFLTT 1128
BLAST of MS003319 vs. TAIR 10
Match:
AT1G68790.1 (little nuclei3 )
HSP 1 Score: 557.8 bits (1436), Expect = 2.2e-158
Identity = 459/1209 (37.97%), Postives = 671/1209 (55.50%), Query Frame = 0
Query: 1 MFTPQRVRSGWPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR 60
MFTPQR R WP T + G + P L D K K V L ++ +E +
Sbjct: 1 MFTPQRNR--WPETDRKGKAIAFSDEIITPPPQRVLLREDDDWQKFKEVGLLDEASLERK 60
Query: 61 AEMFVGSAEAAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEA 120
D++ L EKI KLE ELF+YQ+NMGLLLIEKK WTS EL Q EA
Sbjct: 61 -------------DRDALIEKILKLEKELFDYQHNMGLLLIEKKQWTSTNNELQQAYDEA 120
Query: 121 KDTLKREQMAHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSK 180
+ LKRE+ ++ I +++A+KREENL+KAL EK+ V +LE L+ + E++ +K T ++K
Sbjct: 121 MEMLKREKTSNAITLNEADKREENLRKALIDEKQFVAELENDLKYWQREHSVVKSTSEAK 180
Query: 181 LAEANALVTSIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSF 240
L EANALV ++EK+LEV+ + A+ K + ++RK+SE+ERKL+++E RE +R+ LS
Sbjct: 181 LEEANALVIGMKEKALEVDRERAIAEEKFSVMNRKSSELERKLKEVETREKVHQREHLSL 240
Query: 241 NAEREAHEATLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDL 300
EREAHEA KQR+DL+EWEK+L E+RL++ + IN REER EN+R +++KEK L
Sbjct: 241 VTEREAHEAVFYKQREDLQEWEKKLTLEEDRLSEVKRSINHREERVMENERTIEKKEKIL 300
Query: 301 EEIQKKIDSAILDLKRKEEDISSRLAAIALKE--------QAKIKEKELLALEEKLSARE 360
E +Q+KI A +L KEE I +L I+LKE + IKEKEL EE L RE
Sbjct: 301 ENLQQKISVAKSELTEKEESIKIKLNDISLKEKDFEAMKAKVDIKEKELHEFEENLIERE 360
Query: 361 RVEIQKLLDEHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGK 420
++EI KLLD+ A+LD ++ EFE+E+EQ R+SLDEEL+ K AE+E+ + EI H EEK+ K
Sbjct: 361 QMEIGKLLDDQKAVLDSRRREFEMELEQMRRSLDEELEGKKAEIEQLQVEISHKEEKLAK 420
Query: 421 REQALEKRTEKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAE 480
RE ALEK+ E +K KE D D + K +K++EK++++EEK + E ++LL DKE L LK E
Sbjct: 421 REAALEKKEEGVKKKEKDLDARLKTVKEKEKALKAEEKKLHMENERLLEDKECLRKLKDE 480
Query: 481 VEKIRAENEAQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDL 540
+E+I E Q ++REE SL +++ ER +F RLQSELKQ+I+ + ++ELLLKE E+L
Sbjct: 481 IEEIGTETTKQESRIREEHESLRITKEERVEFLRLQSELKQQIDKVKQEEELLLKEREEL 540
Query: 541 KQQRETFEREWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRRE 600
KQ +E FE+EWE LD KRA + +EQ + + EK SE+ RLK E + + + ++RE
Sbjct: 541 KQDKERFEKEWEALDKKRANITREQNEVAEENEKLRNLQISEKHRLKREEMTSRDNLKRE 600
Query: 601 QEDLKLVKESFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFR 660
+ +K+ KESF A ME D E+QKR L+ Q + + ER+F
Sbjct: 601 LDGVKMQKESFEADME-------------------DLEMQKRNLDMEFQRQEEAGERDFN 660
Query: 661 EKEKLFKEEQERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIR 720
E+ + +++ + EL+NINY + +A++EM++++ E+L E+ER++ V K+ L+ Q E+
Sbjct: 661 ERARTYEKRSQEELDNINYTKKLAQREMEEMQYEKLALEREREQISVRKKLLKEQEAEMH 720
Query: 721 KDIEELLELSNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN 780
KDI EL L + LK++R+ + ER+RF+ F++K +SC +CGEIT FVLSDL L +E+
Sbjct: 721 KDITELDVLRSSLKEKRKEFICERERFLVFLEKLKSCSSCGEITENFVLSDL-RLPDVED 780
Query: 781 AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKCTSKIFKFSP-GK--KI 840
D+ Q L+ L P + S T S L K SK+ SP GK K+
Sbjct: 781 G------DKRFGKQKLKAEEALN---ISPSAENSKRT-SLLGKIASKLLSISPIGKTDKV 840
Query: 841 TSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLDDKRIQSDISGREV 900
T + I K ++P DSLD +SG +
Sbjct: 841 T---------DLGITVKLPESSQP------------------DDSLD------RVSGEDH 900
Query: 901 EPSQNLSTDDQSNINSKAPEVPVDSQPSDLRGNQWGLRPRKGKTK-ISRTRSVLAVVEDA 960
EP S +QS +S+ E P S S+++ + +PR+G+ + R +SV +
Sbjct: 901 EP----SATEQSFTDSRIQEGPEGSLQSEMKSD----KPRRGRGRGRGRGKSVRGRSQAT 960
Query: 961 KAIIGELPQTHQVEYPNGNAEDSSQLNNESRDESSLADKGTQRTVRKRTRANSSKFM-GE 1020
KA+ + DS + E T RKR R +S+ E
Sbjct: 961 KAV----------------SRDSKPSDGE--------------TPRKRQREQTSRITESE 1020
Query: 1021 NDDDDSEVRSGSVVEGQPRKRRQRAVRAVQTP-EKRYNLRPSKVGAAAKGPSQVSKEIGE 1080
DS+ S+ G RK+RQ AV QTP + RY LR + + +Q SK G
Sbjct: 1021 QAAGDSDEGVDSITTGGRRKKRQIAVPVSQTPGQTRYQLRRHRNVGTEEDKAQASK--GA 1080
Query: 1081 DAPVKRTEEDAH---YSKALPTPSMGVTSDNAGSAHLV------RCRTVGDNQDDGIAGT 1140
+R +D K TP G +N + LV TV + T
Sbjct: 1081 TEKQERVNDDIRKVPSPKETRTPPEGENRENGKAEVLVETVTHEEIVTVETETVFKVNNT 1085
Query: 1141 SKNSIDIVSVSEEVNGTPEVAGKYGNRGEYKSESCEVVGDEDGDDDDEEAEHPG-EASIG 1186
KN ++ + EV G+ E+ GE E+ ++ +E+ +++EE E G +ASIG
Sbjct: 1141 GKNPVEDPQL--EVGGSGEIR----EHGEEDDENISMIEEENEGEEEEETERQGNDASIG 1085
BLAST of MS003319 vs. TAIR 10
Match:
AT5G65770.1 (little nuclei4 )
HSP 1 Score: 324.7 bits (831), Expect = 3.1e-88
Identity = 295/919 (32.10%), Postives = 480/919 (52.23%), Query Frame = 0
Query: 11 WPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR-AEMFVGSAE 70
+P+TP T +A N ++TP+ +PL++ ++ R +
Sbjct: 10 FPITPST--------AATNRLTITPN--------SRVLKSPLTEEIMWKRLKDAGFDEQS 69
Query: 71 AAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEAKDTLKREQM 130
D+ L I+KLE+E+++YQ+NMGLLL+EK + +S+YEE+ + E+ T RE+
Sbjct: 70 IKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMREKS 129
Query: 131 AHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSKLAEANALVT 190
A++ A+++A+KREE+LKK +G+ KEC+ LEK L EMRAE AE K + S ++EA+ ++
Sbjct: 130 AYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSEAHVMIE 189
Query: 191 SIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSFNAEREAHEA 250
+K + EAK+RAA+A AE +R + ERKL+++E+RE L R SF +E E E
Sbjct: 190 DALKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSECETKEN 249
Query: 251 TLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDLEEIQKKIDS 310
+ +R L E K LQ ERL Q +NQRE+ + + + EK L+ + +
Sbjct: 250 EMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEE 309
Query: 311 AILDLKRKEEDISSRLAAIALKEQAKI--------KEKELLALEEKLSARERVEIQKLLD 370
+ K+ ++ LA A +E+A KE+ELL EEK++++E IQ +L
Sbjct: 310 ERKAFEDKKSNLEIALALCAKREEAVSERESSLLKKEQELLVAEEKIASKESELIQNVLA 369
Query: 371 EHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGKREQALEKRT 430
IL +K + E E+E K KS++ E++ K E +E +IK E+ VG++E LE ++
Sbjct: 370 NQEVILRKRKSDVEAELECKSKSVEVEIESKRRAWELREVDIKQREDLVGEKEHDLEVQS 429
Query: 431 EKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAEVEKIRAENE 490
L +KE D K L ++EK++ + E++I + L +KE L L E+++ E
Sbjct: 430 RALAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLE 489
Query: 491 AQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDLKQQRETFER 550
+ ++ LE +SE S+ L+ +LK+E+++ R QK +L EA+ LK ++ FE
Sbjct: 490 DKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEA 549
Query: 551 EWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRREQEDLKLVKE 610
EWE +D KR ++ KE + + Q+E F E + +K ER A N + + E L +E
Sbjct: 550 EWEHIDVKREELRKEAEYITRQREAFSMYLKDERDNIKEERDALRNQHKNDVESLNRERE 609
Query: 611 SFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFREKEKLFKEE 670
F M E S K Q ER+ L E+QKRELE ++N+ +E+E R++EK F++E
Sbjct: 610 EFMNKMVEEHSEWLSKIQRERADFLLGIEMQKRELEYCIENKREELENSSRDREKAFEQE 669
Query: 671 QERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIRKDIEELLEL 730
++ E E I L+++A KE++ +++E + + ER E ++++E ER+ E++ +EEL
Sbjct: 670 KKLEEERIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSVEELKVQ 729
Query: 731 SNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN--------- 790
KL+ QR L ERD +++ + +N + ++ + L +E
Sbjct: 730 REKLETQRHMLRAERDEIRHEIEELKKLENLKVALDDMSMAKM-QLSNLERSWEKVSALK 789
Query: 791 ----------------AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKC 850
+ V N D Y ++R LTP A P SW+++C
Sbjct: 790 QKVVSRDDELDLQNGVSTVSNSEDGY--NSSMERQNGLTPSSATP--------FSWIKRC 849
Query: 851 TSKIFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLD 895
T+ IFK SP K +EE G S + E S+R E LS+A+
Sbjct: 850 TNLIFKTSPEKSTLMHHYEEEGGVPS----EKLKLESSRREEKAYTEG-LSIAVERLEAG 895
BLAST of MS003319 vs. TAIR 10
Match:
AT5G65770.3 (little nuclei4 )
HSP 1 Score: 324.7 bits (831), Expect = 3.1e-88
Identity = 295/919 (32.10%), Postives = 480/919 (52.23%), Query Frame = 0
Query: 11 WPLTPKTGGQKGGAGSAANPSSVTPSLSRRGDGIKGKSVTPLSDSLVENR-AEMFVGSAE 70
+P+TP T +A N ++TP+ +PL++ ++ R +
Sbjct: 10 FPITPST--------AATNRLTITPN--------SRVLKSPLTEEIMWKRLKDAGFDEQS 69
Query: 71 AAALDQEGLAEKISKLENELFEYQYNMGLLLIEKKDWTSKYEELSQGLVEAKDTLKREQM 130
D+ L I+KLE+E+++YQ+NMGLLL+EK + +S+YEE+ + E+ T RE+
Sbjct: 70 IKNRDKAALIAYIAKLESEVYDYQHNMGLLLLEKNELSSQYEEIKASVDESDLTHMREKS 129
Query: 131 AHMIAISDAEKREENLKKALGVEKECVLDLEKALREMRAENAEIKFTGDSKLAEANALVT 190
A++ A+++A+KREE+LKK +G+ KEC+ LEK L EMRAE AE K + S ++EA+ ++
Sbjct: 130 AYVSALAEAKKREESLKKDVGIAKECISSLEKTLHEMRAECAETKVSAGSTMSEAHVMIE 189
Query: 191 SIEEKSLEVEAKLRAADAKLAEVSRKNSEVERKLQDLEAREGALRRDRLSFNAEREAHEA 250
+K + EAK+RAA+A AE +R + ERKL+++E+RE L R SF +E E E
Sbjct: 190 DALKKLADAEAKMRAAEALQAEANRYHRIAERKLKEVESREDDLTRRLASFKSECETKEN 249
Query: 251 TLAKQRDDLREWEKQLQDAEERLAKGQTIINQREERANENDRMVKQKEKDLEEIQKKIDS 310
+ +R L E K LQ ERL Q +NQRE+ + + + EK L+ + +
Sbjct: 250 EMVIERQTLNERRKSLQQEHERLLDAQVSLNQREDHIFARSQELAELEKGLDTAKTTFEE 309
Query: 311 AILDLKRKEEDISSRLAAIALKEQAKI--------KEKELLALEEKLSARERVEIQKLLD 370
+ K+ ++ LA A +E+A KE+ELL EEK++++E IQ +L
Sbjct: 310 ERKAFEDKKSNLEIALALCAKREEAVSERESSLLKKEQELLVAEEKIASKESELIQNVLA 369
Query: 371 EHNAILDGKKVEFELEIEQKRKSLDEELKIKAAEVEKKEAEIKHMEEKVGKREQALEKRT 430
IL +K + E E+E K KS++ E++ K E +E +IK E+ VG++E LE ++
Sbjct: 370 NQEVILRKRKSDVEAELECKSKSVEVEIESKRRAWELREVDIKQREDLVGEKEHDLEVQS 429
Query: 431 EKLKDKEADYDTKFKALKQREKSVRSEEKNIEAERKQLLTDKEDLISLKAEVEKIRAENE 490
L +KE D K L ++EK++ + E++I + L +KE L L E+++ E
Sbjct: 430 RALAEKEKDITEKSFNLDEKEKNLVATEEDINRKTTMLEDEKERLRKLDLELQQSLTSLE 489
Query: 491 AQLLKLREERNSLEVSESERSDFHRLQSELKQEIENYRGQKELLLKEAEDLKQQRETFER 550
+ ++ LE +SE S+ L+ +LK+E+++ R QK +L EA+ LK ++ FE
Sbjct: 490 DKRKRVDSATQKLEALKSETSELSTLEMKLKEELDDLRAQKLEMLAEADRLKVEKAKFEA 549
Query: 551 EWEDLDDKRAQVEKEQKALMLQKEKFEKRTFSEEERLKNERLATENYIRREQEDLKLVKE 610
EWE +D KR ++ KE + + Q+E F E + +K ER A N + + E L +E
Sbjct: 550 EWEHIDVKREELRKEAEYITRQREAFSMYLKDERDNIKEERDALRNQHKNDVESLNRERE 609
Query: 611 SFAASMEHEKSAIAEKAQSERSQMLHDFELQKRELESAMQNRVDEMEREFREKEKLFKEE 670
F M E S K Q ER+ L E+QKRELE ++N+ +E+E R++EK F++E
Sbjct: 610 EFMNKMVEEHSEWLSKIQRERADFLLGIEMQKRELEYCIENKREELENSSRDREKAFEQE 669
Query: 671 QERELENINYLRDIARKEMDDLKLERLKTEKERQEAEVNKEHLERQGIEIRKDIEELLEL 730
++ E E I L+++A KE++ +++E + + ER E ++++E ER+ E++ +EEL
Sbjct: 670 KKLEEERIQSLKEMAEKELEHVQVELKRLDAERLEIKLDRERREREWAELKDSVEELKVQ 729
Query: 731 SNKLKDQRERLVRERDRFISFVDKHRSCKNCGEITSEFVLSDLHHLDGIEN--------- 790
KL+ QR L ERD +++ + +N + ++ + L +E
Sbjct: 730 REKLETQRHMLRAERDEIRHEIEELKKLENLKVALDDMSMAKM-QLSNLERSWEKVSALK 789
Query: 791 ----------------AGVLNLPDRYLEFQGLQRNGELTPGVAGPKSPISGGTISWLRKC 850
+ V N D Y ++R LTP A P SW+++C
Sbjct: 790 QKVVSRDDELDLQNGVSTVSNSEDGY--NSSMERQNGLTPSSATP--------FSWIKRC 849
Query: 851 TSKIFKFSPGKKITSPAFEEVDGEASILDKHDNRAEPSKRISAVEDEAELSLAIASDSLD 895
T+ IFK SP K +EE G S + E S+R E LS+A+
Sbjct: 850 TNLIFKTSPEKSTLMHHYEEEGGVPS----EKLKLESSRREEKAYTEG-LSIAVERLEAG 895
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
F4HRT5 | 6.2e-251 | 47.96 | Protein CROWDED NUCLEI 1 OS=Arabidopsis thaliana OX=3702 GN=CRWN1 PE=1 SV=1 | [more] |
A0A166B1A6 | 3.4e-249 | 49.17 | Nuclear matrix constituent protein 1 OS=Daucus carota subsp. sativus OX=79200 GN... | [more] |
I0J0E7 | 6.5e-176 | 39.45 | Nuclear matrix constituent protein 1 OS=Allium cepa OX=4679 GN=NMCP1 PE=2 SV=1 | [more] |
Q9SAF6 | 1.5e-159 | 37.95 | Protein CROWDED NUCLEI 2 OS=Arabidopsis thaliana OX=3702 GN=CRWN2 PE=1 SV=1 | [more] |
Q9CA42 | 3.0e-157 | 37.97 | Protein CROWDED NUCLEI 3 OS=Arabidopsis thaliana OX=3702 GN=CRWN3 PE=1 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BZ66 | 0.0e+00 | 98.41 | protein CROWDED NUCLEI 1 OS=Momordica charantia OX=3673 GN=LOC111006029 PE=3 SV=... | [more] |
E5GCT1 | 0.0e+00 | 82.77 | Nuclear matrix constituent-like protein 1 OS=Cucumis melo subsp. melo OX=412675 ... | [more] |
A0A1S3CA47 | 0.0e+00 | 82.06 | protein CROWDED NUCLEI 1 OS=Cucumis melo OX=3656 GN=LOC103498563 PE=3 SV=1 | [more] |
A0A0A0KXP5 | 0.0e+00 | 81.66 | DNA double-strand break repair rad50 ATPase OS=Cucumis sativus OX=3659 GN=Csa_5G... | [more] |
A0A6J1JVM2 | 0.0e+00 | 80.92 | protein CROWDED NUCLEI 1-like isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC11148... | [more] |