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Sequences
The following sequences are available for this feature:
Gene sequence (with intron) Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below. ATGTGCGAGCTGAAGATTGGCTCCAAGTCGCCCCCACGTTTATGTAAAACCACCCGCACTATTATCCACGGAAGGATATTTTTCGAGGAACCGAGTGGACTTGAGAGAGATTCCATTTCCCACCTGCAAGACTTGGTCGCCGGAGCCAAATTTTCGTCGCTTCAGCCCAAGGTAGGAGCCTCTGTTCTCAGTTTCTGCCCATTTACTGATCTGGGTTTGCTGCATTTTGTTGATTTCAGCATTGGGTTTTTCT mRNA sequence ATGTGCGAGCTGAAGATTGGCTCCAAGTCGCCCCCACGTTTATGTAAAACCACCCGCACTATTATCCACGGAAGGATATTTTTCGAGGAACCGAGTGGACTTGAGAGAGATTCCATTTCCCACCTGCAAGACTTGGTCGCCGGAGCCAAATTTTCGTCGCTTCAGCCCAAGGAGCCTCTGTTCTCAGTTTCTGCCCATTTACTGATCTGGGTTTGCTGCATTTTGTTGATTTCAGCATTGGGTTTTTCT Coding sequence (CDS) ATGTGCGAGCTGAAGATTGGCTCCAAGTCGCCCCCACGTTTATGTAAAACCACCCGCACTATTATCCACGGAAGGATATTTTTCGAGGAACCGAGTGGACTTGAGAGAGATTCCATTTCCCACCTGCAAGACTTGGTCGCCGGAGCCAAATTTTCGTCGCTTCAGCCCAAGGAGCCTCTGTTCTCAGTTTCTGCCCATTTACTGATCTGGGTTTGCTGCATTTTGTTGATTTCAGCATTGGGTTTTTCT Protein sequence MCELKIGSKSPPRLCKTTRTIIHGRIFFEEPSGLERDSISHLQDLVAGAKFSSLQPKEPLFSVSAHLLIWVCCILLISALGFS
Homology
BLAST of MS003315 vs. NCBI nr
Match: KGN52561.1 (hypothetical protein Csa_009198 [Cucumis sativus]) HSP 1 Score: 58.9 bits (141), Expect = 2.4e-05 Identity = 40/84 (47.62%), Postives = 46/84 (54.76%), Query Frame = 0 Query: 1 MCELKIG--SKSPPRLCKTTRTIIHGRIFFEEPSGLERDSISHLQDLVAGAKFSSLQPK- 60 MCEL + P CKT TIIH RIF PSGL+R L L K+ L + Sbjct: 1 MCELNEDWLQQVAPTFCKTAPTIIHRRIFLGLPSGLQRFHF-RLSGLGHRRKYHRLSERY 60
Query: 61 EPLFSVSAHLLIWVCCILLISALG 82 E FSVSAHLL+W C IL I+A G Sbjct: 61 ELCFSVSAHLLMWGCHILSITAFG 83
BLAST of MS003315 vs. ExPASy TrEMBL
Match: A0A0A0KXP0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643890 PE=4 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 1.1e-05 Identity = 40/84 (47.62%), Postives = 46/84 (54.76%), Query Frame = 0 Query: 1 MCELKIG--SKSPPRLCKTTRTIIHGRIFFEEPSGLERDSISHLQDLVAGAKFSSLQPK- 60 MCEL + P CKT TIIH RIF PSGL+R L L K+ L + Sbjct: 1 MCELNEDWLQQVAPTFCKTAPTIIHRRIFLGLPSGLQRFHF-RLSGLGHRRKYHRLSERY 60
Query: 61 EPLFSVSAHLLIWVCCILLISALG 82 E FSVSAHLL+W C IL I+A G Sbjct: 61 ELCFSVSAHLLMWGCHILSITAFG 83
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
KGN52561.1 | 2.4e-05 | 47.62 | hypothetical protein Csa_009198 [Cucumis sativus] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A0A0KXP0 | 1.1e-05 | 47.62 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G643890 PE=4 SV=1 | [more] |
Match Name | E-value | Identity | Description | |
Relationships
The following mRNA feature(s) are a part of this gene:
Feature Name | Unique Name | Type |
MS003315.1 | MS003315.1 | mRNA |
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