MS003308 (gene) Bitter gourd (TR) v1

Overview


Name	MS003308
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	ATP-dependent zinc metalloprotease FtsH-like
Location	scaffold234: 1960832 .. 1963352 (+)
RNA-Seq Expression	MS003308
Synteny	MS003308

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGGGCCTTTCTGTTTTTTGCAATAATGGGTACTCTCTACCTCCAGGAAGCTTGGGAGCTCATGTTAGCAGCGAGAGGTCTTTTTGGAGGTATAGAAACCTTTCTTGTAGTTCTGTTGCTCTTCCTTCCGTGGCGTTTACTGCTACGTGCAGAAATTTTCATTCTGAGTTGCTCTGTAGTTGTAGATTTAAGTTAATGTTAAATGGGCAGAGGCGATTTTCCTGTTTAGAGTTGAGCAAGTTCTGTAAATCACGGCGTGGATTATCTTGTAACAGTAAACTTGGGCATTTGATGAATGATAAAATGCCCCATCTGGGTAGTAGAAGAAACGACAATTTGAGAAGAAAATTTGCTTTGAGATTACGCCCGAGGTTGAGATTGTTGTCTATAAGATTGAGAACAGTTTCTGTTAGATCAGCTCTGAACAATGTAGGGACATTTTTTAGGAAGAATATTAGGAAGGTGACCTTTTCTGCTTCAGTTTCCATTGTTTTGGGGCTATGCTATTTGTTTCTGAGAATAACAGCAGTCCCACCTTCTAAAAGTGTTCCATATTCAGATTTCGTAACCAGCCTTCAGAATGGAACTGTCACAAAAGTTCTACTCGAGGAGGGATCTCGTCGGATATATTTTAACCGGAGTTTTACGGAGTCTATTCAAGGCTCAGATAGCAAACCACCATTAGGAGATATTTCTGATGGCAGTGATAAGGGAATGAATGACGAATCAGGAACTGTTCAATCCCCAAGAGTAAATTTATTGACGAAGATTTCTAGAAGGAGAAGCCGTGCTGTGACTCCTGAGTGGCAATTTTCGACTAGGAAAGTTGACCGTGATGAAAAGTTTCTGCTTAGTTTGATGAGAGAAAAGGGAACTACTTATAGCTCAGCCCCTCAATCGGTTTTAATGTCGATGAGAACTACATTGATAACCATCATATCTTTATGGATTCCTTTGATTCCTCTCATGTGGCTTCTCTATCGTCAACTTTCTGCATCGAGTACCACTGCAAAAAAGCGTAAACCGAATAGTCCAATGGTTGGATTTGATGATGTGGAAGGCGTAGACGGTGCCAAAGTGGAGCTCATGGAGGTAAGCTATTTAAAGCTTCATTTACTGACCAAGGATGCCATCTTGTGTGCTTGGTTTCAATGCAGAAGATGGAACAATATGGCTCTTACATGTTCCTTGTTTTAAACTATGTTCTTTAAATTAATTGTGTAGATATATAAGGTTTCAATGTTGTTCAAGTTCAAAGTACCTAGTGTATCCTATCAACGAATCAATTTCGACATTTAATCATACATGAGACATGAGAAGCGGGTCAATAGGGTACAAAGTTTAGGGGCTAAAGTAGAATTCAAGTTAAAGTGCAAAGACTTTAAGTCGAGCAACTTATTTCTTTTTCTCTATTGACGAAATTTATGACCATAGGTAGTATCATGTCTTCAAGGAGCCATTAACTACCAGAAATTAGGAGCAAAGCTTCCTAGAGGTGTACTGTTAGTAGGTCCTCCAGGAACTGGGAAAACGCTCCTTGCACGAGCTGTGGCAGGAGAAGCAGGAGTTCCGTTTTTCAGTGTATCTGCCAGTGAGTTTGTTGAAATGTTTGTTGGGCGAGGGGCTGCACGTATCAGAGACCTTTTTAACGTGGCAAGAAAATGTGCACCATCAATCATATTCATCGATGAACTTGATGCGGTTGGAGGGAAACGAGGTAGAAGTTTCAACGATGAACGCGACCAAACATTGAACCAGGTAATCTCAGGTTAGAATGTAATCATCTCTCTCTCTAAAACTATTTGCAGTATAGTGTCAGTAAAAATTCCATAATCTTACTTGGCTTCTTTCCCAATTACCATAGTTGCTAACCGAAATGGATGGATTCGAGTCAGACATGAAAGTGATTGTTATAGCAGCAACTAATAGACCCGAAGCCTTGGATCCTGCCCTATGCAGACCCGGTAGATTCTCGAGAAAAATCCTCGTAGGAGAGCCCGACGAAGAAGGGAGGAGAAAAATCTTGGCAGTACATTTAAGAGAAGTCCCGCTCAAGGAAGACCTGAACTTGGTATGCAGTCTAGTAGCCTCACTAACCCCTGGTTACGTGGGTGCTGATCTTGCAAATATCGTTAATGAAGCAGCATTACTCACTGCTCGTAGAGGTCGGTCCATTTCTCGACTTGCAACACCCTTCTTTTAAAAAACGATCATTATAGCTAGGACAATAACTGAATGTACATCTTGCGCGCAAGATCCTGAAGAGTTTTCGAGCAGTCCTGGACATCATTCCGTGTTTTTCTTGTTCTTTTTTGCAGGTGGTGAAACCATAACGAGGGAAGACATAATGGAAGCCATTGAAAGATCAAAATTTGGGATAAACAACAAGCAGGTGAGGCATAATTCAATAAGCAATGAACTGGGAAGACTTTTTCCATGGATGCCATCTCTAATGGGAAGGAATGACAAAAAACTTCAAGGATCAACAGAAGGGCCATTAGGCTACCAAACTTTGAGC

mRNA sequence

ATGGCGGGCCTTTCTGTTTTTTGCAATAATGGGTACTCTCTACCTCCAGGAAGCTTGGGAGCTCATGTTAGCAGCGAGAGGTCTTTTTGGAGGTATAGAAACCTTTCTTGTAGTTCTGTTGCTCTTCCTTCCGTGGCGTTTACTGCTACGTGCAGAAATTTTCATTCTGAGTTGCTCTGTAGTTGTAGATTTAAGTTAATGTTAAATGGGCAGAGGCGATTTTCCTGTTTAGAGTTGAGCAAGTTCTGTAAATCACGGCGTGGATTATCTTGTAACAGTAAACTTGGGCATTTGATGAATGATAAAATGCCCCATCTGGGTAGTAGAAGAAACGACAATTTGAGAAGAAAATTTGCTTTGAGATTACGCCCGAGGTTGAGATTGTTGTCTATAAGATTGAGAACAGTTTCTGTTAGATCAGCTCTGAACAATGTAGGGACATTTTTTAGGAAGAATATTAGGAAGGTGACCTTTTCTGCTTCAGTTTCCATTGTTTTGGGGCTATGCTATTTGTTTCTGAGAATAACAGCAGTCCCACCTTCTAAAAGTGTTCCATATTCAGATTTCGTAACCAGCCTTCAGAATGGAACTGTCACAAAAGTTCTACTCGAGGAGGGATCTCGTCGGATATATTTTAACCGGAGTTTTACGGAGTCTATTCAAGGCTCAGATAGCAAACCACCATTAGGAGATATTTCTGATGGCAGTGATAAGGGAATGAATGACGAATCAGGAACTGTTCAATCCCCAAGAGTAAATTTATTGACGAAGATTTCTAGAAGGAGAAGCCGTGCTGTGACTCCTGAGTGGCAATTTTCGACTAGGAAAGTTGACCGTGATGAAAAGTTTCTGCTTAGTTTGATGAGAGAAAAGGGAACTACTTATAGCTCAGCCCCTCAATCGGTTTTAATGTCGATGAGAACTACATTGATAACCATCATATCTTTATGGATTCCTTTGATTCCTCTCATGTGGCTTCTCTATCGTCAACTTTCTGCATCGAGTACCACTGCAAAAAAGCGTAAACCGAATAGTCCAATGGTTGGATTTGATGATGTGGAAGGCGTAGACGGTGCCAAAGTGGAGCTCATGGAGGTAGTATCATGTCTTCAAGGAGCCATTAACTACCAGAAATTAGGAGCAAAGCTTCCTAGAGGTGTACTGTTAGTAGGTCCTCCAGGAACTGGGAAAACGCTCCTTGCACGAGCTGTGGCAGGAGAAGCAGGAGTTCCGTTTTTCAGTGTATCTGCCAGTGAGTTTGTTGAAATGTTTGTTGGGCGAGGGGCTGCACGTATCAGAGACCTTTTTAACGTGGCAAGAAAATGTGCACCATCAATCATATTCATCGATGAACTTGATGCGGTTGGAGGGAAACGAGGTAGAAGTTTCAACGATGAACGCGACCAAACATTGAACCAGTTGCTAACCGAAATGGATGGATTCGAGTCAGACATGAAAGTGATTGTTATAGCAGCAACTAATAGACCCGAAGCCTTGGATCCTGCCCTATGCAGACCCGGTAGATTCTCGAGAAAAATCCTCGTAGGAGAGCCCGACGAAGAAGGGAGGAGAAAAATCTTGGCAGTACATTTAAGAGAAGTCCCGCTCAAGGAAGACCTGAACTTGGTATGCAGTCTAGTAGCCTCACTAACCCCTGGTTACGTGGGTGCTGATCTTGCAAATATCGTTAATGAAGCAGCATTACTCACTGCTCGTAGAGGTGGTGAAACCATAACGAGGGAAGACATAATGGAAGCCATTGAAAGATCAAAATTTGGGATAAACAACAAGCAGGTGAGGCATAATTCAATAAGCAATGAACTGGGAAGACTTTTTCCATGGATGCCATCTCTAATGGGAAGGAATGACAAAAAACTTCAAGGATCAACAGAAGGGCCATTAGGCTACCAAACTTTGAGC

Coding sequence (CDS)

ATGGCGGGCCTTTCTGTTTTTTGCAATAATGGGTACTCTCTACCTCCAGGAAGCTTGGGAGCTCATGTTAGCAGCGAGAGGTCTTTTTGGAGGTATAGAAACCTTTCTTGTAGTTCTGTTGCTCTTCCTTCCGTGGCGTTTACTGCTACGTGCAGAAATTTTCATTCTGAGTTGCTCTGTAGTTGTAGATTTAAGTTAATGTTAAATGGGCAGAGGCGATTTTCCTGTTTAGAGTTGAGCAAGTTCTGTAAATCACGGCGTGGATTATCTTGTAACAGTAAACTTGGGCATTTGATGAATGATAAAATGCCCCATCTGGGTAGTAGAAGAAACGACAATTTGAGAAGAAAATTTGCTTTGAGATTACGCCCGAGGTTGAGATTGTTGTCTATAAGATTGAGAACAGTTTCTGTTAGATCAGCTCTGAACAATGTAGGGACATTTTTTAGGAAGAATATTAGGAAGGTGACCTTTTCTGCTTCAGTTTCCATTGTTTTGGGGCTATGCTATTTGTTTCTGAGAATAACAGCAGTCCCACCTTCTAAAAGTGTTCCATATTCAGATTTCGTAACCAGCCTTCAGAATGGAACTGTCACAAAAGTTCTACTCGAGGAGGGATCTCGTCGGATATATTTTAACCGGAGTTTTACGGAGTCTATTCAAGGCTCAGATAGCAAACCACCATTAGGAGATATTTCTGATGGCAGTGATAAGGGAATGAATGACGAATCAGGAACTGTTCAATCCCCAAGAGTAAATTTATTGACGAAGATTTCTAGAAGGAGAAGCCGTGCTGTGACTCCTGAGTGGCAATTTTCGACTAGGAAAGTTGACCGTGATGAAAAGTTTCTGCTTAGTTTGATGAGAGAAAAGGGAACTACTTATAGCTCAGCCCCTCAATCGGTTTTAATGTCGATGAGAACTACATTGATAACCATCATATCTTTATGGATTCCTTTGATTCCTCTCATGTGGCTTCTCTATCGTCAACTTTCTGCATCGAGTACCACTGCAAAAAAGCGTAAACCGAATAGTCCAATGGTTGGATTTGATGATGTGGAAGGCGTAGACGGTGCCAAAGTGGAGCTCATGGAGGTAGTATCATGTCTTCAAGGAGCCATTAACTACCAGAAATTAGGAGCAAAGCTTCCTAGAGGTGTACTGTTAGTAGGTCCTCCAGGAACTGGGAAAACGCTCCTTGCACGAGCTGTGGCAGGAGAAGCAGGAGTTCCGTTTTTCAGTGTATCTGCCAGTGAGTTTGTTGAAATGTTTGTTGGGCGAGGGGCTGCACGTATCAGAGACCTTTTTAACGTGGCAAGAAAATGTGCACCATCAATCATATTCATCGATGAACTTGATGCGGTTGGAGGGAAACGAGGTAGAAGTTTCAACGATGAACGCGACCAAACATTGAACCAGTTGCTAACCGAAATGGATGGATTCGAGTCAGACATGAAAGTGATTGTTATAGCAGCAACTAATAGACCCGAAGCCTTGGATCCTGCCCTATGCAGACCCGGTAGATTCTCGAGAAAAATCCTCGTAGGAGAGCCCGACGAAGAAGGGAGGAGAAAAATCTTGGCAGTACATTTAAGAGAAGTCCCGCTCAAGGAAGACCTGAACTTGGTATGCAGTCTAGTAGCCTCACTAACCCCTGGTTACGTGGGTGCTGATCTTGCAAATATCGTTAATGAAGCAGCATTACTCACTGCTCGTAGAGGTGGTGAAACCATAACGAGGGAAGACATAATGGAAGCCATTGAAAGATCAAAATTTGGGATAAACAACAAGCAGGTGAGGCATAATTCAATAAGCAATGAACTGGGAAGACTTTTTCCATGGATGCCATCTCTAATGGGAAGGAATGACAAAAAACTTCAAGGATCAACAGAAGGGCCATTAGGCTACCAAACTTTGAGC

Protein sequence

MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLCSCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFALRLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPPSKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGAKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVRHNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS

Homology

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BLAST of MS003308 vs. NCBI nr
Match: XP_022134380.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X1 [Momordica charantia])

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 636/640 (99.38%), Postives = 639/640 (99.84%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNF+SELLC
Sbjct: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFNSELLC 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCN KLGHLMNDKMPHLGSRRN+NLRRKFAL
Sbjct: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNCKLGHLMNDKMPHLGSRRNNNLRRKFAL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP
Sbjct: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240
           SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM
Sbjct: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240

Query: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300
           NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ
Sbjct: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300

Query: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGAK 360
           SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKRKPNSPMVGFDDVEGVDGAK
Sbjct: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRKPNSPMVGFDDVEGVDGAK 360

Query: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420
           VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF
Sbjct: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420

Query: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480
           VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG
Sbjct: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480

Query: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540
           FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL
Sbjct: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540

Query: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600
           NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR
Sbjct: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600

Query: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS
Sbjct: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 640

[Close]

BLAST of MS003308 vs. NCBI nr
Match: XP_022134381.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X2 [Momordica charantia])

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 607/640 (94.84%), Postives = 609/640 (95.16%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVFCNNGYSLPPGSLGAHVSSERSFW                              
Sbjct: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFW------------------------------ 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCN KLGHLMNDKMPHLGSRRN+NLRRKFAL
Sbjct: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNCKLGHLMNDKMPHLGSRRNNNLRRKFAL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP
Sbjct: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240
           SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM
Sbjct: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240

Query: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300
           NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ
Sbjct: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300

Query: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGAK 360
           SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKRKPNSPMVGFDDVEGVDGAK
Sbjct: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRKPNSPMVGFDDVEGVDGAK 360

Query: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420
           VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF
Sbjct: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420

Query: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480
           VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG
Sbjct: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480

Query: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540
           FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL
Sbjct: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540

Query: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600
           NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR
Sbjct: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600

Query: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS
Sbjct: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 610

[Close]

BLAST of MS003308 vs. NCBI nr
Match: XP_004141600.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Cucumis sativus] >KGN52548.1 hypothetical protein Csa_008008 [Cucumis sativus])

HSP 1 Score: 1020.4 bits (2637), Expect = 6.8e-294
Identity = 530/642 (82.55%), Postives = 580/642 (90.34%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVF  NG++    S G H+ +  S  RY++ + +S++LPS+ F +T RN   ELLC
Sbjct: 1   MAGLSVFSINGHA---RSFGPHIDTNNSVLRYKSFAATSLSLPSMPFPSTYRNSQCELLC 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRF++ +NGQ RFS LE SKFCK   G SCN KLG+L+NDKM HLG R N+NLRRKF L
Sbjct: 61  SCRFRVTVNGQWRFSSLEFSKFCKPWCGFSCNCKLGYLVNDKMSHLGGRGNNNLRRKFGL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLS RL+TVSVRS LNNVGTF RKN+RKVT SASVSIVL +CYLFL+ITAVPP
Sbjct: 121 RLRPRLRLLSRRLKTVSVRSTLNNVGTFIRKNVRKVTLSASVSIVLAICYLFLKITAVPP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKP--PLGDISDGSDK 240
           SK+VPYSDF+TSLQ+GTVTKVLLEEGSRRIYFNRSFTESIQG D +P     D S+GSDK
Sbjct: 181 SKNVPYSDFITSLQSGTVTKVLLEEGSRRIYFNRSFTESIQGLDGQPLAVAVDSSNGSDK 240

Query: 241 GMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSA 300
           GM+++S TVQ+PR NLLTKISRR+SR   PEWQFSTRKVDRDEKFLL LMREKGTTYSSA
Sbjct: 241 GMSEDSRTVQAPRTNLLTKISRRKSRVAIPEWQFSTRKVDRDEKFLLGLMREKGTTYSSA 300

Query: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDG 360
           PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKR+PNSPMVGF+DVEGVDG
Sbjct: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDG 360

Query: 361 AKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420
           AKVELMEVVSCLQGA+NYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS
Sbjct: 361 AKVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420

Query: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480
           EFVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEM
Sbjct: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480

Query: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKE 540
           DGFESDMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLREVPL+E
Sbjct: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEE 540

Query: 541 DLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQ 600
           DLNL+CSLVA+LTPGYVGADLANIVNE+ALL ARRGGE I+RED+M AIERSKFGIN+KQ
Sbjct: 541 DLNLICSLVAALTPGYVGADLANIVNESALLAARRGGEMISREDLMGAIERSKFGINSKQ 600

Query: 601 VRHNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           +R N+ISNEL RLFPWM SLMGRNDK++  S +GPLGYQTLS
Sbjct: 601 LRSNTISNELERLFPWMTSLMGRNDKRVDPS-QGPLGYQTLS 638

[Close]

BLAST of MS003308 vs. NCBI nr
Match: XP_008459447.1 (PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Cucumis melo])

HSP 1 Score: 1017.7 bits (2630), Expect = 4.4e-293
Identity = 530/642 (82.55%), Postives = 577/642 (89.88%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVF  N YS    S G H+ +  S  RY+N S +S+ LPS+ F +T R+   EL+C
Sbjct: 1   MAGLSVFSVNSYS---RSFGPHIDTSNSVLRYKNFSATSLTLPSMPFPSTYRSSQCELVC 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRF++M++GQ RFS LE SKFCK   G SC+ KLG LMNDKMPHLG   N+ LRR F L
Sbjct: 61  SCRFRVMVSGQWRFSSLEFSKFCKPWCGFSCSCKLGFLMNDKMPHLGGTGNNKLRRNFGL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLS RL+TVSVRS LNNVGTF RKN+RKVT SASVSIVL +CYLFL+ITAV P
Sbjct: 121 RLRPRLRLLSRRLKTVSVRSTLNNVGTFIRKNVRKVTLSASVSIVLAICYLFLKITAVAP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKP--PLGDISDGSDK 240
           SK+VPYSDF+TSLQNGTVTKVLLEEGSRRIYFNRSFTESIQG D +P   + D S+GSDK
Sbjct: 181 SKNVPYSDFITSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGLDGQPLAVVVDSSNGSDK 240

Query: 241 GMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSA 300
           GMN++S TVQ+P++NLLTKISRR+SR   PEWQFSTRKVD DEKFLLSLMREKGTTYSSA
Sbjct: 241 GMNEDSRTVQAPKMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLSLMREKGTTYSSA 300

Query: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDG 360
           PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKR+PNSPMVGF+DVEGVDG
Sbjct: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDG 360

Query: 361 AKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420
           AKVELMEVVSCLQGA+NYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS
Sbjct: 361 AKVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420

Query: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480
           EFVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEM
Sbjct: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480

Query: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKE 540
           DGFESDMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLREVPL+E
Sbjct: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEE 540

Query: 541 DLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQ 600
           DLNL+CSLVA+LTPGYVGADLANIVNEAALL ARRGGE I+RED+M AIERSKFGIN+KQ
Sbjct: 541 DLNLICSLVAALTPGYVGADLANIVNEAALLAARRGGEMISREDLMGAIERSKFGINSKQ 600

Query: 601 VRHNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           +R N+ISNEL RLFPWM SLMGRNDK++  S +GPLGYQTLS
Sbjct: 601 LRSNTISNELERLFPWMTSLMGRNDKRVDPS-QGPLGYQTLS 638

[Close]

BLAST of MS003308 vs. NCBI nr
Match: XP_038890854.1 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Benincasa hispida])

HSP 1 Score: 1017.3 bits (2629), Expect = 5.8e-293
Identity = 532/641 (83.00%), Postives = 577/641 (90.02%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSV  NNGYS      G H+ +  S  RY+N   +S++LPS+AF +T RN   ELL 
Sbjct: 1   MAGLSVISNNGYS---RRFGPHIDTNNSVLRYKNSCANSLSLPSMAFPSTYRNSQCELLS 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           S RF++++NGQ RFS LE SKFCK   G SCN KLG+LMNDKMPHLGSRRN+NLRR F+L
Sbjct: 61  SFRFRIIVNGQWRFSFLEFSKFCKPWCGFSCNCKLGYLMNDKMPHLGSRRNNNLRRNFSL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLS RL+T+SVRSALNNVGTF R+N+RKVT SASVSIVLGL YLFL+ITAVPP
Sbjct: 121 RLRPRLRLLSRRLKTISVRSALNNVGTFIRRNVRKVTLSASVSIVLGLFYLFLKITAVPP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKP--PLGDISDGSDK 240
           SK+VPYSDF+TSLQNGTVT VLLEEGSRRIYFN+SF E IQG DSKP     D S+GSDK
Sbjct: 181 SKNVPYSDFITSLQNGTVTNVLLEEGSRRIYFNQSFMEPIQGLDSKPLAVAVDSSNGSDK 240

Query: 241 GMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSA 300
           GMNDES T Q+PR+NLLTKISRR+SR   PEWQFSTRKVD DEKFLL LMREKGTTYSSA
Sbjct: 241 GMNDESRTGQAPRMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLGLMREKGTTYSSA 300

Query: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDG 360
           PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTA+KR+PNSPMVGF+DVEGVDG
Sbjct: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTARKRQPNSPMVGFEDVEGVDG 360

Query: 361 AKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420
           AKVELMEVVSCLQGA+NYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS
Sbjct: 361 AKVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420

Query: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480
           EFVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEM
Sbjct: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480

Query: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKE 540
           DGFESDMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLR+VPL+E
Sbjct: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLRDVPLEE 540

Query: 541 DLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQ 600
           DLNL+CSLVA+LTPGYVGADLANIVNEAALL ARRGGETI RED++ AIERSKFGIN++Q
Sbjct: 541 DLNLICSLVAALTPGYVGADLANIVNEAALLAARRGGETIWREDLVGAIERSKFGINSRQ 600

Query: 601 VRHNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTL 640
            R N+ISNEL RLFPWM SLMGRNDKK+  S +GPLGYQTL
Sbjct: 601 PRSNTISNELERLFPWMTSLMGRNDKKVDPS-QGPLGYQTL 637

[Close]

BLAST of MS003308 vs. ExPASy Swiss-Prot
Match: Q9M895 (Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=FTSHI3 PE=1 SV=1)

HSP 1 Score: 723.4 bits (1866), Expect = 2.3e-207
Identity = 387/562 (68.86%), Postives = 451/562 (80.25%), Query Frame = 0


Query: 85  SRRGLSCNSKLGHLM----NDKMPHLGSR-RNDNLRRKFALRLRPRLRLLSIRLRTVSVR 144
           SR   SCNS++  L+     DK   +G   RN   RR+F+LRLRPRLRL+ +RL     R
Sbjct: 71  SRNRFSCNSEIKRLVTGDYGDKETRIGENGRNKGKRRRFSLRLRPRLRLVRMRLGRFDFR 130

Query: 145 SALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPPSKSVPYSDFVTSLQNGTVT 204
           +++ +   F +KN+++V  S  V+++ GLCYLFLR+TAVP    VPYSDFVT+L+ G+V+
Sbjct: 131 ASMEDFRYFLKKNLKRVILSTGVALIFGLCYLFLRLTAVPSPSIVPYSDFVTNLRGGSVS 190

Query: 205 KVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGMNDESGTVQSPRVNLLTK-I 264
           KVLLEEGSRRIY+N    E+++  D       +    D  +  + GTV       +TK  
Sbjct: 191 KVLLEEGSRRIYYNTD--ENVEVVDDVHKSETL---EDPAIQIDGGTV----TEAVTKDD 250

Query: 265 SRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQSVLMSMRTTLITIISLWI 324
           + R+ RA+ P W++ TRKVD DEKFLLSLMREKG TYSSAPQS LMSMRTTLITIISLWI
Sbjct: 251 TPRKVRALPPVWKYVTRKVDHDEKFLLSLMREKGITYSSAPQSALMSMRTTLITIISLWI 310

Query: 325 PLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGAKVELMEVVSCLQGAINYQK 384
           PL PLMWLLYRQLSAS++ AKKR+  +P VGFDDVEGVD AK EL+E+VSCLQG+INY+K
Sbjct: 311 PLTPLMWLLYRQLSASNSPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKK 370

Query: 385 LGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNV 444
           LGA+LPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE+FVGRGAARIRDLFN 
Sbjct: 371 LGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNA 430

Query: 445 ARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESDMKVIVIAATNRPEA 504
           ARK +PSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESD KVIVIAATNRPEA
Sbjct: 431 ARKNSPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEA 490

Query: 505 LDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDLNLVCSLVASLTPGYVGAD 564
           LD ALCRPGRFSRK+LV EPD+EGRRKILA+HLR+VPL+ED  L+C LVASLTPG+VGAD
Sbjct: 491 LDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGAD 550

Query: 565 LANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVRHNSISNELGRLFPWMPSL 624
           LANIVNEAALL ARRGGE + REDIMEAIER+KFGIN+K+ R  ++ NEL ++FPWMPSL
Sbjct: 551 LANIVNEAALLAARRGGEAVAREDIMEAIERAKFGINDKEARPRTLGNELSKMFPWMPSL 610

Query: 625 MGRNDKKLQGSTEGPLGYQTLS 641
             RN    Q   +GPLGYQTLS
Sbjct: 611 ARRNGPD-QDGLQGPLGYQTLS 622

[Close]

BLAST of MS003308 vs. ExPASy Swiss-Prot
Match: D1CDT8 (ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC BAA-798 / YNP1) OX=525904 GN=ftsH PE=3 SV=1)

HSP 1 Score: 312.8 bits (800), Expect = 9.2e-84
Identity = 195/425 (45.88%), Postives = 257/425 (60.47%), Query Frame = 0


Query: 190 VTSLQNGTVTKVLLEEGSRRIYF-NRSFTESIQGSDSKPPLGDISDGSDKGMNDESGTVQ 249
           V  L N  V  +L  EG   +     SF + ++ ++    + +++  +DK   +    V+
Sbjct: 43  VALLLNWLVAPILFPEGKGAVSIPYTSFKQQLENNN----VAEVTTQADKITGEFKQAVK 102

Query: 250 SPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQSVLMSMRT 309
            P V+              P  +F T      +  L+S + +KG   +  P+S   S R+
Sbjct: 103 VPGVD-------------QPVKRFVTHIPAFGDDQLMSQLDQKGVIVNVQPES---STRS 162

Query: 310 TLITIISLWIPLI----PLMWLLYRQLSA--------SSTTAKKRKPNSPMVGFDDVEGV 369
            L++I+  + P I      +WL+ +  S+         S   +     S  V FDDV G+
Sbjct: 163 LLLSILISFGPTILFFLLFLWLISKAQSSQQGLFGLGKSRAKRYNATESTRVTFDDVAGI 222

Query: 370 DGAKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVS 429
           + AK EL E+V  L+    YQ+LG  +P+GVLL+GPPGTGKTLLARAVAGEAGVPFFS+S
Sbjct: 223 EEAKQELAEIVDFLKNPQKYQRLGGTIPKGVLLIGPPGTGKTLLARAVAGEAGVPFFSMS 282

Query: 430 ASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFN----DERDQTLN 489
            SEFVEM VG GAAR+R+LF  A+K AP IIF+DELDA+G +RG S N    DER+QTLN
Sbjct: 283 GSEFVEMIVGVGAARVRELFQQAKKEAPCIIFVDELDAIGRRRGSSINVGGHDEREQTLN 342

Query: 490 QLLTEMDGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLR 549
           QLL EMDGF+S   VIV+AATNRP+ LDPAL RPGRF R+++V  PD+ GR KIL VH R
Sbjct: 343 QLLVEMDGFDSRQGVIVLAATNRPDVLDPALLRPGRFDRRVVVQRPDKVGRLKILQVHTR 402

Query: 550 EVPLKEDLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKF 598
            VPL  D NL  S +A+ TPG VGADL N+VNEAALL ARRG   + RED  +A+E+   
Sbjct: 403 NVPL--DPNLDLSEIAAATPGLVGADLRNLVNEAALLAARRGKNYVDREDFFDALEKITL 445

[Close]

BLAST of MS003308 vs. ExPASy Swiss-Prot
Match: B9L3S8 (ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum (strain ATCC 27502 / DSM 5159 / P-2) OX=309801 GN=ftsH2 PE=3 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 8.6e-82
Identity = 199/447 (44.52%), Postives = 268/447 (59.96%), Query Frame = 0


Query: 164 IVLGLCYLFLRITAV------PPSKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFT 223
           I++GL  LF  + AV       P   + YS FV +++ G V+ V L              
Sbjct: 80  IIVGL-ILFYNLYAVFRPERSGPQSEIAYSSFVAAVEKGLVSTVTLS------------G 139

Query: 224 ESIQGSDSKPPLGDISDGSDKGMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKV 283
           ++I G  ++P            +   +G V  P   L   +   + R+VT   +F T   
Sbjct: 140 QTIDGQFTQP------------LRVANGIVYLPGEPLPDTVDPAQVRSVT---RFRTVIP 199

Query: 284 DRDEKFLLSLMREKGTTYSSAPQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASS-- 343
           +  +  + + +++        P S   S+   L++++  ++ LI L++LL R LS     
Sbjct: 200 ENTQAEVTAFLQQHNVLLKVQP-SGGASLPGLLLSVLP-FVFLIGLLFLLGRNLSRGQQN 259

Query: 344 ------TTAKKRKPNSPMVGFDDVEGVDGAKVELMEVVSCLQGAINYQKLGAKLPRGVLL 403
                 + A+      P V F DV G + AK EL +VV  L+    Y ++GA+LPRGVLL
Sbjct: 260 VFSFGRSRARVYDVERPQVTFADVAGEEEAKAELAQVVDFLKNPAKYHRIGARLPRGVLL 319

Query: 404 VGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFI 463
           VGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVG GA+R+RDLF  A+  APSIIFI
Sbjct: 320 VGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGVGASRVRDLFERAKAQAPSIIFI 379

Query: 464 DELDAVGGKRGRSF---NDERDQTLNQLLTEMDGFESDMKVIVIAATNRPEALDPALCRP 523
           DELDAVG +R       NDER+QTLNQLL EMDGFE+   V+VIAATNRP+ LDPAL RP
Sbjct: 380 DELDAVGRQRFAGLGVGNDEREQTLNQLLVEMDGFEAHTDVVVIAATNRPDVLDPALLRP 439

Query: 524 GRFSRKILVGEPDEEGRRKILAVHLREVPLKEDLNLVCSLVASLTPGYVGADLANIVNEA 583
           GRF R+++VG PD+ GR  IL +H R +P+  D++L    +A+ TPG+ GADLAN+VNEA
Sbjct: 440 GRFDRQVVVGLPDKRGRAAILRIHTRGIPIAPDVDL--EGLAAATPGFSGADLANLVNEA 494

Query: 584 ALLTARRGGETITREDIMEAIERSKFG 594
           AL+ ARRG + + R D  EA+++   G
Sbjct: 500 ALVAARRGKQVVDRSDFEEALDKMLLG 494

[Close]

BLAST of MS003308 vs. ExPASy Swiss-Prot
Match: D3EZK2 (ATP-dependent zinc metalloprotease FtsH 3 OS=Conexibacter woesei (strain DSM 14684 / CIP 108061 / JCM 11494 / NBRC 100937 / ID131577) OX=469383 GN=ftsH3 PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-80
Identity = 185/383 (48.30%), Postives = 244/383 (63.71%), Query Frame = 0


Query: 232 ISDGSDKGMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRK---VDRDEKFLLSLM 291
           + DG+ K ++    ++Q      +T   +    +VT + +FST      D DE  L  L+
Sbjct: 113 VRDGNVKEISSTGASIQGDFRADVTYPPKDDKDSVTAK-KFSTEVPAFADTDE--LSKLL 172

Query: 292 REKGTTYSSAPQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASS---------TTAK 351
           ++   T +++P     S+  +++      I +I L   L R+++ ++         + A+
Sbjct: 173 QDNDVTVNASPADNGPSLLVSILLGFGPVILIIALFVFLSRRMAGAAGGGMMSFGRSRAR 232

Query: 352 KRKPNSPMVGFDDVEGVDGAKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTL 411
           + +     V F DV G+D A+ EL E+V  L+    YQ+LG K+P+GVLL G PGTGKTL
Sbjct: 233 RSEGGEAQVTFRDVAGIDEAEAELNEIVDFLKNPQKYQRLGGKIPKGVLLSGQPGTGKTL 292

Query: 412 LARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKR 471
           LARAVAGEAGVPFFS+SASEFVEM VG GA+R+RDLF  A++ AP+IIFIDELDA+G  R
Sbjct: 293 LARAVAGEAGVPFFSMSASEFVEMIVGVGASRVRDLFRQAKEAAPAIIFIDELDAIGRAR 352

Query: 472 G---RSF--NDERDQTLNQLLTEMDGFESDMKVIVIAATNRPEALDPALCRPGRFSRKIL 531
           G    SF  NDER+QTLNQ+LTEMDGFE    VIVIAATNRPE LD AL RPGRF R++ 
Sbjct: 353 GGGRGSFGGNDEREQTLNQILTEMDGFEPTTAVIVIAATNRPEILDAALLRPGRFDRRVT 412

Query: 532 VGEPDEEGRRKILAVHLREVPLKEDLNLVCSLVASLTPGYVGADLANIVNEAALLTARRG 591
           V  PD  GR  IL VH R VPL +D++L    +AS TPG VGADLAN+VNEAALL ARRG
Sbjct: 413 VAAPDRNGRLMILKVHTRSVPLADDVDL--ESIASSTPGMVGADLANLVNEAALLAARRG 472

Query: 592 GETITREDIMEAIERSKFGINNK 598
              +T  D+ +A+E+   G   K
Sbjct: 473 HVKVTNSDVADALEKVVLGAERK 490

[Close]

BLAST of MS003308 vs. ExPASy Swiss-Prot
Match: A8ZNZ4 (ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina (strain MBIC 11017) OX=329726 GN=ftsH PE=3 SV=1)

HSP 1 Score: 301.6 bits (771), Expect = 2.1e-80
Identity = 202/461 (43.82%), Postives = 259/461 (56.18%), Query Frame = 0


Query: 150 RKNIRKVTFSASVSIVLG-LCYLFLRITAVPPSKSVPYSDFVTSLQNGTVTKVLLEEGSR 209
           RKN     F  S+ I+   L +L L +   P      YSDF+T ++ G V +V  E    
Sbjct: 11  RKNFEPKRFGGSLFILFTLLLFLNLFVLRGPRFPITAYSDFITQVEAGQVERV--EVRPD 70

Query: 210 RIYFNRSFTESIQGSDSKPPLGDISDGSDKGMNDESGTVQSPRVNLLTKISRRRSRAVTP 269
           RI +                   I      G N+ + T                      
Sbjct: 71  RIRY-------------------ILKSDQYGFNEGTETAA-------------------- 130

Query: 270 EWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQSVLMSMRTTLITIISLWIPLIPLMWLLY 329
              F T  V  D + L   +RE    Y + P S L  + T L  ++   I      WL+ 
Sbjct: 131 --VFDTVPVGIDLE-LPKFLREHDVQYFAPPPSSLSWLPTLLGWVVPPLIFFGIWSWLIN 190

Query: 330 RQ-------LSASSTTAKKRKPNSPMVGFDDVEGVDGAKVELMEVVSCLQGAINYQKLGA 389
           R        L+   + A+     S  V FDDV GV+ AK EL+E+V  L  A  Y +LGA
Sbjct: 191 RNQGAGPAALTVGQSKARIYSEGSTGVTFDDVAGVEEAKTELLEIVDFLAHADKYTRLGA 250

Query: 390 KLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARK 449
           K+P+GVLLVGPPGTGKTLLA+A+AGEA VPFFS+S SEF+E+FVG GAAR+RDLF  A++
Sbjct: 251 KIPKGVLLVGPPGTGKTLLAKAIAGEAKVPFFSISGSEFIELFVGIGAARVRDLFEQAKQ 310

Query: 450 CAPSIIFIDELDAVGGKRG-----RSFNDERDQTLNQLLTEMDGFESDMKVIVIAATNRP 509
            AP I+FIDELDA+G  RG        NDER+QTLNQLL+EMDGF+ ++ VI++AATNRP
Sbjct: 311 QAPCIVFIDELDALGKARGGPGGFTGGNDEREQTLNQLLSEMDGFDPNVGVILLAATNRP 370

Query: 510 EALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDLNLVCSLVASLTPGYVG 569
           E LDPAL RPGRF R+I+V  PD+ GR  IL VH+R V L ED+NL  + +A  TPG+ G
Sbjct: 371 EVLDPALLRPGRFDRQIVVDRPDKMGREAILKVHVRGVKLAEDINL--TKLAVRTPGFSG 425

Query: 570 ADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNK 598
           ADLAN+VNEAALL AR+  + +   D  EAIER   G+  K
Sbjct: 431 ADLANLVNEAALLAARQSRDAVVMSDFNEAIERVVAGLEKK 425

[Close]

BLAST of MS003308 vs. ExPASy TrEMBL
Match: A0A6J1BY57 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006654 PE=3 SV=1)

HSP 1 Score: 1238.0 bits (3202), Expect = 0.0e+00
Identity = 636/640 (99.38%), Postives = 639/640 (99.84%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNF+SELLC
Sbjct: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFNSELLC 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCN KLGHLMNDKMPHLGSRRN+NLRRKFAL
Sbjct: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNCKLGHLMNDKMPHLGSRRNNNLRRKFAL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP
Sbjct: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240
           SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM
Sbjct: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240

Query: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300
           NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ
Sbjct: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300

Query: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGAK 360
           SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKRKPNSPMVGFDDVEGVDGAK
Sbjct: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRKPNSPMVGFDDVEGVDGAK 360

Query: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420
           VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF
Sbjct: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420

Query: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480
           VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG
Sbjct: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480

Query: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540
           FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL
Sbjct: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540

Query: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600
           NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR
Sbjct: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600

Query: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS
Sbjct: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 640

[Close]

BLAST of MS003308 vs. ExPASy TrEMBL
Match: A0A6J1BXN8 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006654 PE=3 SV=1)

HSP 1 Score: 1164.1 bits (3010), Expect = 0.0e+00
Identity = 607/640 (94.84%), Postives = 609/640 (95.16%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVFCNNGYSLPPGSLGAHVSSERSFW                              
Sbjct: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFW------------------------------ 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCN KLGHLMNDKMPHLGSRRN+NLRRKFAL
Sbjct: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNCKLGHLMNDKMPHLGSRRNNNLRRKFAL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP
Sbjct: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240
           SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM
Sbjct: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGM 240

Query: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300
           NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ
Sbjct: 241 NDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQ 300

Query: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGAK 360
           SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKRKPNSPMVGFDDVEGVDGAK
Sbjct: 301 SVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRKPNSPMVGFDDVEGVDGAK 360

Query: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420
           VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF
Sbjct: 361 VELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEF 420

Query: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480
           VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG
Sbjct: 421 VEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDG 480

Query: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540
           FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL
Sbjct: 481 FESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDL 540

Query: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600
           NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR
Sbjct: 541 NLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVR 600

Query: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS
Sbjct: 601 HNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 610

[Close]

BLAST of MS003308 vs. ExPASy TrEMBL
Match: A0A0A0KSL6 (AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643270 PE=3 SV=1)

HSP 1 Score: 1020.4 bits (2637), Expect = 3.3e-294
Identity = 530/642 (82.55%), Postives = 580/642 (90.34%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVF  NG++    S G H+ +  S  RY++ + +S++LPS+ F +T RN   ELLC
Sbjct: 1   MAGLSVFSINGHA---RSFGPHIDTNNSVLRYKSFAATSLSLPSMPFPSTYRNSQCELLC 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRF++ +NGQ RFS LE SKFCK   G SCN KLG+L+NDKM HLG R N+NLRRKF L
Sbjct: 61  SCRFRVTVNGQWRFSSLEFSKFCKPWCGFSCNCKLGYLVNDKMSHLGGRGNNNLRRKFGL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLS RL+TVSVRS LNNVGTF RKN+RKVT SASVSIVL +CYLFL+ITAVPP
Sbjct: 121 RLRPRLRLLSRRLKTVSVRSTLNNVGTFIRKNVRKVTLSASVSIVLAICYLFLKITAVPP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKP--PLGDISDGSDK 240
           SK+VPYSDF+TSLQ+GTVTKVLLEEGSRRIYFNRSFTESIQG D +P     D S+GSDK
Sbjct: 181 SKNVPYSDFITSLQSGTVTKVLLEEGSRRIYFNRSFTESIQGLDGQPLAVAVDSSNGSDK 240

Query: 241 GMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSA 300
           GM+++S TVQ+PR NLLTKISRR+SR   PEWQFSTRKVDRDEKFLL LMREKGTTYSSA
Sbjct: 241 GMSEDSRTVQAPRTNLLTKISRRKSRVAIPEWQFSTRKVDRDEKFLLGLMREKGTTYSSA 300

Query: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDG 360
           PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKR+PNSPMVGF+DVEGVDG
Sbjct: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDG 360

Query: 361 AKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420
           AKVELMEVVSCLQGA+NYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS
Sbjct: 361 AKVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420

Query: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480
           EFVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEM
Sbjct: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480

Query: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKE 540
           DGFESDMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLREVPL+E
Sbjct: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEE 540

Query: 541 DLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQ 600
           DLNL+CSLVA+LTPGYVGADLANIVNE+ALL ARRGGE I+RED+M AIERSKFGIN+KQ
Sbjct: 541 DLNLICSLVAALTPGYVGADLANIVNESALLAARRGGEMISREDLMGAIERSKFGINSKQ 600

Query: 601 VRHNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           +R N+ISNEL RLFPWM SLMGRNDK++  S +GPLGYQTLS
Sbjct: 601 LRSNTISNELERLFPWMTSLMGRNDKRVDPS-QGPLGYQTLS 638

[Close]

BLAST of MS003308 vs. ExPASy TrEMBL
Match: A0A1S3C9P6 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498578 PE=3 SV=1)

HSP 1 Score: 1017.7 bits (2630), Expect = 2.1e-293
Identity = 530/642 (82.55%), Postives = 577/642 (89.88%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLSVF  N YS    S G H+ +  S  RY+N S +S+ LPS+ F +T R+   EL+C
Sbjct: 1   MAGLSVFSVNSYS---RSFGPHIDTSNSVLRYKNFSATSLTLPSMPFPSTYRSSQCELVC 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLGSRRNDNLRRKFAL 120
           SCRF++M++GQ RFS LE SKFCK   G SC+ KLG LMNDKMPHLG   N+ LRR F L
Sbjct: 61  SCRFRVMVSGQWRFSSLEFSKFCKPWCGFSCSCKLGFLMNDKMPHLGGTGNNKLRRNFGL 120

Query: 121 RLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPP 180
           RLRPRLRLLS RL+TVSVRS LNNVGTF RKN+RKVT SASVSIVL +CYLFL+ITAV P
Sbjct: 121 RLRPRLRLLSRRLKTVSVRSTLNNVGTFIRKNVRKVTLSASVSIVLAICYLFLKITAVAP 180

Query: 181 SKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKP--PLGDISDGSDK 240
           SK+VPYSDF+TSLQNGTVTKVLLEEGSRRIYFNRSFTESIQG D +P   + D S+GSDK
Sbjct: 181 SKNVPYSDFITSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGLDGQPLAVVVDSSNGSDK 240

Query: 241 GMNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSA 300
           GMN++S TVQ+P++NLLTKISRR+SR   PEWQFSTRKVD DEKFLLSLMREKGTTYSSA
Sbjct: 241 GMNEDSRTVQAPKMNLLTKISRRKSRVAIPEWQFSTRKVDHDEKFLLSLMREKGTTYSSA 300

Query: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDG 360
           PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTAKKR+PNSPMVGF+DVEGVDG
Sbjct: 301 PQSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTAKKRQPNSPMVGFEDVEGVDG 360

Query: 361 AKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420
           AKVELMEVVSCLQGA+NYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS
Sbjct: 361 AKVELMEVVSCLQGAMNYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSAS 420

Query: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480
           EFVEMFVGRGAARIRDLFNVARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEM
Sbjct: 421 EFVEMFVGRGAARIRDLFNVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEM 480

Query: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKE 540
           DGFESDMKVIVIAATNRPEALDPALCRPGRFSRK+LVGEPDEEGRRKILAVHLREVPL+E
Sbjct: 481 DGFESDMKVIVIAATNRPEALDPALCRPGRFSRKVLVGEPDEEGRRKILAVHLREVPLEE 540

Query: 541 DLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQ 600
           DLNL+CSLVA+LTPGYVGADLANIVNEAALL ARRGGE I+RED+M AIERSKFGIN+KQ
Sbjct: 541 DLNLICSLVAALTPGYVGADLANIVNEAALLAARRGGEMISREDLMGAIERSKFGINSKQ 600

Query: 601 VRHNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           +R N+ISNEL RLFPWM SLMGRNDK++  S +GPLGYQTLS
Sbjct: 601 LRSNTISNELERLFPWMTSLMGRNDKRVDPS-QGPLGYQTLS 638

[Close]

BLAST of MS003308 vs. ExPASy TrEMBL
Match: A0A6J1FHP5 (probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=Cucurbita moschata OX=3662 GN=LOC111445537 PE=3 SV=1)

HSP 1 Score: 1012.7 bits (2617), Expect = 6.9e-292
Identity = 523/641 (81.59%), Postives = 575/641 (89.70%), Query Frame = 0


Query: 1   MAGLSVFCNNGYSLPPGSLGAHVSSERSFWRYRNLSCSSVALPSVAFTATCRNFHSELLC 60
           MAGLS+ CNNGYSLPPGS GAH++S +  WRYRN SCSSV LP +A  +T  N   +LLC
Sbjct: 1   MAGLSIVCNNGYSLPPGSFGAHINSNKHLWRYRNFSCSSVTLPPMALPSTYLNLRCQLLC 60

Query: 61  SCRFKLMLNGQRRFSCLELSKFCKSRRGLSCNSKLGHLMNDKMPHLG-SRRNDNLRRKFA 120
           +C+F+++ NGQ RF               SCNSKL  +MNDKMP LG SRRN+NLRRKF 
Sbjct: 61  NCQFRVISNGQWRF---------------SCNSKLERMMNDKMPPLGSSRRNNNLRRKFG 120

Query: 121 LRLRPRLRLLSIRLRTVSVRSALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVP 180
           LRLRPRLRLLS RLRTVSVRSA+NNV TF RKN+RKV+ SASV IVLGLCYLFL++TAVP
Sbjct: 121 LRLRPRLRLLSKRLRTVSVRSAMNNVRTFIRKNVRKVSLSASVCIVLGLCYLFLKVTAVP 180

Query: 181 PSKSVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKG 240
           PSK+VPYSDF+TSLQNGTVTKVLLEEGSRRIYFNRSFTESI+G DSKP + D S+GSDKG
Sbjct: 181 PSKNVPYSDFITSLQNGTVTKVLLEEGSRRIYFNRSFTESIEGLDSKPLVVDSSNGSDKG 240

Query: 241 MNDESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAP 300
           MND+S  VQ+P++NLLTK S RRS+   PEW+FSTRKVD DEKFLL LMREKGTTYSSAP
Sbjct: 241 MNDDSRAVQAPKMNLLTKFS-RRSKVAIPEWKFSTRKVDHDEKFLLGLMREKGTTYSSAP 300

Query: 301 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGA 360
           QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSAS+TTA+KR+PNSPMVGF+DVEGVDGA
Sbjct: 301 QSVLMSMRTTLITIISLWIPLIPLMWLLYRQLSASNTTARKRQPNSPMVGFEDVEGVDGA 360

Query: 361 KVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 420
           KVELMEVVSCLQGAI+YQKLGAKLP+GVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE
Sbjct: 361 KVELMEVVSCLQGAISYQKLGAKLPKGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASE 420

Query: 421 FVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 480
           FVEMFVGRGAARIRDLF+VARKCAPSI+FIDELDAVGGKRGRSFNDERDQTLNQLLTEMD
Sbjct: 421 FVEMFVGRGAARIRDLFSVARKCAPSIVFIDELDAVGGKRGRSFNDERDQTLNQLLTEMD 480

Query: 481 GFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKED 540
           GFESD KVIVIAATNRPEALDPALCRPGRFSRK+LVG+PDEEGRRKILAVHLR+VPL+E+
Sbjct: 481 GFESDTKVIVIAATNRPEALDPALCRPGRFSRKVLVGQPDEEGRRKILAVHLRDVPLEEN 540

Query: 541 LNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQV 600
            NL+CSLVASLTPGYVGADLANIVNEAALL ARRGGETI+RED MEAIERSKFGINNK++
Sbjct: 541 PNLICSLVASLTPGYVGADLANIVNEAALLAARRGGETISREDFMEAIERSKFGINNKKL 600

Query: 601 RHNSISNELGRLFPWMPSLMGRNDKKLQGSTEGPLGYQTLS 641
           R N+I+ EL RLFPWM +LMGRND K+ GS +GPLGYQTLS
Sbjct: 601 RSNTINTELERLFPWMTALMGRNDTKMDGS-QGPLGYQTLS 624

[Close]

BLAST of MS003308 vs. TAIR 10
Match: AT3G02450.1 (cell division protein ftsH, putative )

HSP 1 Score: 723.4 bits (1866), Expect = 1.6e-208
Identity = 387/562 (68.86%), Postives = 451/562 (80.25%), Query Frame = 0


Query: 85  SRRGLSCNSKLGHLM----NDKMPHLGSR-RNDNLRRKFALRLRPRLRLLSIRLRTVSVR 144
           SR   SCNS++  L+     DK   +G   RN   RR+F+LRLRPRLRL+ +RL     R
Sbjct: 71  SRNRFSCNSEIKRLVTGDYGDKETRIGENGRNKGKRRRFSLRLRPRLRLVRMRLGRFDFR 130

Query: 145 SALNNVGTFFRKNIRKVTFSASVSIVLGLCYLFLRITAVPPSKSVPYSDFVTSLQNGTVT 204
           +++ +   F +KN+++V  S  V+++ GLCYLFLR+TAVP    VPYSDFVT+L+ G+V+
Sbjct: 131 ASMEDFRYFLKKNLKRVILSTGVALIFGLCYLFLRLTAVPSPSIVPYSDFVTNLRGGSVS 190

Query: 205 KVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGMNDESGTVQSPRVNLLTK-I 264
           KVLLEEGSRRIY+N    E+++  D       +    D  +  + GTV       +TK  
Sbjct: 191 KVLLEEGSRRIYYNTD--ENVEVVDDVHKSETL---EDPAIQIDGGTV----TEAVTKDD 250

Query: 265 SRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQSVLMSMRTTLITIISLWI 324
           + R+ RA+ P W++ TRKVD DEKFLLSLMREKG TYSSAPQS LMSMRTTLITIISLWI
Sbjct: 251 TPRKVRALPPVWKYVTRKVDHDEKFLLSLMREKGITYSSAPQSALMSMRTTLITIISLWI 310

Query: 325 PLIPLMWLLYRQLSASSTTAKKRKPNSPMVGFDDVEGVDGAKVELMEVVSCLQGAINYQK 384
           PL PLMWLLYRQLSAS++ AKKR+  +P VGFDDVEGVD AK EL+E+VSCLQG+INY+K
Sbjct: 311 PLTPLMWLLYRQLSASNSPAKKRRSKNPTVGFDDVEGVDSAKDELVEIVSCLQGSINYKK 370

Query: 385 LGAKLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNV 444
           LGA+LPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVE+FVGRGAARIRDLFN 
Sbjct: 371 LGARLPRGVLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVELFVGRGAARIRDLFNA 430

Query: 445 ARKCAPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESDMKVIVIAATNRPEA 504
           ARK +PSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESD KVIVIAATNRPEA
Sbjct: 431 ARKNSPSIIFIDELDAVGGKRGRSFNDERDQTLNQLLTEMDGFESDTKVIVIAATNRPEA 490

Query: 505 LDPALCRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDLNLVCSLVASLTPGYVGAD 564
           LD ALCRPGRFSRK+LV EPD+EGRRKILA+HLR+VPL+ED  L+C LVASLTPG+VGAD
Sbjct: 491 LDSALCRPGRFSRKVLVAEPDQEGRRKILAIHLRDVPLEEDAFLICDLVASLTPGFVGAD 550

Query: 565 LANIVNEAALLTARRGGETITREDIMEAIERSKFGINNKQVRHNSISNELGRLFPWMPSL 624
           LANIVNEAALL ARRGGE + REDIMEAIER+KFGIN+K+ R  ++ NEL ++FPWMPSL
Sbjct: 551 LANIVNEAALLAARRGGEAVAREDIMEAIERAKFGINDKEARPRTLGNELSKMFPWMPSL 610

Query: 625 MGRNDKKLQGSTEGPLGYQTLS 641
             RN    Q   +GPLGYQTLS
Sbjct: 611 ARRNGPD-QDGLQGPLGYQTLS 622

[Close]

BLAST of MS003308 vs. TAIR 10
Match: AT5G58870.1 (FTSH protease 9 )

HSP 1 Score: 285.8 bits (730), Expect = 8.5e-77
Identity = 195/438 (44.52%), Postives = 252/438 (57.53%), Query Frame = 0


Query: 183 SVPYSDFVTSLQNGTVTKVLLEEGSRRIYFNRSFTESIQGSDSKPPLGDISDGSDKGMND 242
           SVPYSDF++ + N  V KV  E     + F      ++Q S++      +S+ S+     
Sbjct: 175 SVPYSDFLSKVNNDEVQKV--EVDGFHVLFKLKDDGNLQESETSSSSIKLSESSE----- 234

Query: 243 ESGTVQSPRVNLLTKISRRRSRAVTPEWQFSTRKVDRDEKFLLSLMREKGTTYSSAPQSV 302
                           +  RS A T    +ST +  RD K     M E    + S  +  
Sbjct: 235 ----------------TMLRSVAPTKRVVYSTTR-PRDIKTPYEKMLENNVEFGSPDKRS 294

Query: 303 LMSMRTTLITIISLWIPLIPLMWLLYR---QLSASST-TAKKRKPNSP----------MV 362
                + LI +  + +    L  LL+R     S S+T   + RK   P           +
Sbjct: 295 GGFFNSGLIVLFYIAV----LAGLLHRFPVNFSQSTTGQLRTRKSGGPGGGKVSGDGETI 354

Query: 363 GFDDVEGVDGAKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGEA 422
            F DV GVD AK EL E+V  L+    Y +LGA+ PRGVLLVG PGTGKTLLA+AVAGE+
Sbjct: 355 TFADVAGVDEAKEELEEIVEFLKNPDRYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGES 414

Query: 423 GVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSF----N 482
            VPF S SASEFVE++VG GA+R+RDLF  A+K APSIIFIDE+DAV   R   F    N
Sbjct: 415 DVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMVSN 474

Query: 483 DERDQTLNQLLTEMDGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRR 542
           DER+QTLNQLLTEMDGF+S   VIV+ ATNR + LDPAL RPGRF R + V  PD+ GR 
Sbjct: 475 DEREQTLNQLLTEMDGFDSSSAVIVLGATNRADVLDPALRRPGRFDRVVTVESPDKVGRE 534

Query: 543 KILAVHL--REVPLKEDLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITRED 601
            IL VH+  +E+PL +D+NL  + +AS+T G+ GADLAN+VNEAALL  R+   T+ + D
Sbjct: 535 SILKVHVSKKELPLGDDVNL--ASIASMTTGFTGADLANLVNEAALLAGRKSKMTVDKID 582

[Close]

BLAST of MS003308 vs. TAIR 10
Match: AT5G15250.1 (FTSH protease 6 )

HSP 1 Score: 284.6 bits (727), Expect = 1.9e-76
Identity = 167/336 (49.70%), Postives = 218/336 (64.88%), Query Frame = 0


Query: 284 LLSLMREKGTTYSSAPQSVLMSMRTTLITII-SLWIPLIPLMWLLYRQLSASSTTAKKRK 343
           L+  M+EK   +++ P +V  +    L+  + +L  PLI    LL   L  SS+      
Sbjct: 146 LVREMKEKNVDFAAHPMNV--NWGAFLLNFLGNLGFPLI----LLVSLLLTSSSRRNPAG 205

Query: 344 PNSPM----------------VGFDDVEGVDGAKVELMEVVSCLQGAINYQKLGAKLPRG 403
           PN P                 + F+DV GVD AK +  E+V  L+    +  LGAK+P+G
Sbjct: 206 PNLPFGLGRSKAKFQMEPNTGITFEDVAGVDEAKQDFEEIVEFLKTPEKFSALGAKIPKG 265

Query: 404 VLLVGPPGTGKTLLARAVAGEAGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSI 463
           VLL GPPGTGKTLLA+A+AGEAGVPFFS+S SEF+EMFVG GA+R RDLFN A+  +P I
Sbjct: 266 VLLTGPPGTGKTLLAKAIAGEAGVPFFSLSGSEFIEMFVGVGASRARDLFNKAKANSPCI 325

Query: 464 IFIDELDAVGGKRGRSF---NDERDQTLNQLLTEMDGFESDMKVIVIAATNRPEALDPAL 523
           +FIDE+DAVG  RG      NDER+QTLNQ+LTEMDGF  +  VIVIAATNRPE LD AL
Sbjct: 326 VFIDEIDAVGRMRGTGIGGGNDEREQTLNQILTEMDGFAGNTGVIVIAATNRPEILDSAL 385

Query: 524 CRPGRFSRKILVGEPDEEGRRKILAVHLREVPLKEDLNLVCSLVASLTPGYVGADLANIV 583
            RPGRF R++ VG PD  GR +IL VH R   L +D++L  S++A  TPG+ GADLAN++
Sbjct: 386 LRPGRFDRQVSVGLPDIRGREEILKVHSRSKKLDKDVSL--SVIAMRTPGFSGADLANLM 445

Query: 584 NEAALLTARRGGETITREDIMEAIERSKFGINNKQV 600
           NEAA+L  RRG + IT  +I ++I+R   G+   ++
Sbjct: 446 NEAAILAGRRGKDKITLTEIDDSIDRIVAGMEGTKM 473

[Close]

BLAST of MS003308 vs. TAIR 10
Match: AT1G50250.1 (FTSH protease 1 )

HSP 1 Score: 281.6 bits (719), Expect = 1.6e-75
Identity = 155/267 (58.05%), Postives = 189/267 (70.79%), Query Frame = 0


Query: 348 VGFDDVEGVDGAKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGE 407
           V F DV G D AK+EL EVV  L+    Y  LGAK+P+G LLVGPPGTGKTLLARAVAGE
Sbjct: 259 VSFADVAGADQAKLELQEVVDFLKNPDKYTALGAKIPKGCLLVGPPGTGKTLLARAVAGE 318

Query: 408 AGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSF---N 467
           AGVPFFS +ASEFVE+FVG GA+R+RDLF  A+  AP I+FIDE+DAVG +RG      N
Sbjct: 319 AGVPFFSCAASEFVELFVGVGASRVRDLFEKAKSKAPCIVFIDEIDAVGRQRGAGMGGGN 378

Query: 468 DERDQTLNQLLTEMDGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGRR 527
           DER+QT+NQLLTEMDGF  +  VIV+AATNRP+ LD AL RPGRF R++ V  PD  GR 
Sbjct: 379 DEREQTINQLLTEMDGFSGNSGVIVLAATNRPDVLDSALLRPGRFDRQVTVDRPDVAGRV 438

Query: 528 KILAVHLREVPLKEDLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITREDIM 587
           KIL VH R   L +D++     VA  TPG+ GADL N++NEAA+L ARR  + I++++I 
Sbjct: 439 KILQVHSRGKALGKDVDF--DKVARRTPGFTGADLQNLMNEAAILAARRELKEISKDEIS 498

Query: 588 EAIERSKFGINNKQVRHNSISNELGRL 612
           +A+ER   G   K      +S E  RL
Sbjct: 499 DALERIIAGPEKKNA---VVSEEKKRL 520

[Close]

BLAST of MS003308 vs. TAIR 10
Match: AT3G47060.1 (FTSH protease 7 )

HSP 1 Score: 281.2 bits (718), Expect = 2.1e-75
Identity = 154/259 (59.46%), Postives = 188/259 (72.59%), Query Frame = 0


Query: 348 VGFDDVEGVDGAKVELMEVVSCLQGAINYQKLGAKLPRGVLLVGPPGTGKTLLARAVAGE 407
           + F DV GVD AK EL E+V  L+    Y +LGA+ PRGVLLVG PGTGKTLLA+AVAGE
Sbjct: 322 ITFADVAGVDEAKEELEEIVEFLRNPEKYVRLGARPPRGVLLVGLPGTGKTLLAKAVAGE 381

Query: 408 AGVPFFSVSASEFVEMFVGRGAARIRDLFNVARKCAPSIIFIDELDAVGGKRGRSF---- 467
           A VPF S SASEFVE++VG GA+R+RDLF  A+K APSIIFIDE+DAV   R   F    
Sbjct: 382 AEVPFISCSASEFVELYVGMGASRVRDLFARAKKEAPSIIFIDEIDAVAKSRDGKFRMGS 441

Query: 468 NDERDQTLNQLLTEMDGFESDMKVIVIAATNRPEALDPALCRPGRFSRKILVGEPDEEGR 527
           NDER+QTLNQLLTEMDGF+S+  VIV+ ATNR + LDPAL RPGRF R + V  PD+ GR
Sbjct: 442 NDEREQTLNQLLTEMDGFDSNSAVIVLGATNRADVLDPALRRPGRFDRVVTVETPDKIGR 501

Query: 528 RKILAVHL--REVPLKEDLNLVCSLVASLTPGYVGADLANIVNEAALLTARRGGETITRE 587
             IL VH+  +E+PL +D+NL    +AS+T G+ GADLAN+VNEAALL  R+    + + 
Sbjct: 502 ESILRVHVSKKELPLGDDVNL--GSIASMTTGFTGADLANLVNEAALLAGRKNKTNVEKI 561

Query: 588 DIMEAIERSKFGINNKQVR 601
           D ++A+ERS  GI  K  R
Sbjct: 562 DFIQAVERSIAGIEKKSAR 578

The following BLAST results are available for this feature:

BLAST of MS003308 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134380.1	0.0e+00	99.38	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isof...	[more]
XP_022134381.1	0.0e+00	94.84	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isof...	[more]
XP_004141600.1	6.8e-294	82.55	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Cuc...	[more]
XP_008459447.1	4.4e-293	82.55	PREDICTED: probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chlorop...	[more]
XP_038890854.1	5.8e-293	83.00	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic [Ben...	[more]

BLAST of MS003308 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9M895	2.3e-207	68.86	Probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=A...	[more]
D1CDT8	9.2e-84	45.88	ATP-dependent zinc metalloprotease FtsH OS=Thermobaculum terrenum (strain ATCC B...	[more]
B9L3S8	8.6e-82	44.52	ATP-dependent zinc metalloprotease FtsH 2 OS=Thermomicrobium roseum (strain ATCC...	[more]
D3EZK2	2.1e-80	48.30	ATP-dependent zinc metalloprotease FtsH 3 OS=Conexibacter woesei (strain DSM 146...	[more]
A8ZNZ4	2.1e-80	43.82	ATP-dependent zinc metalloprotease FtsH OS=Acaryochloris marina (strain MBIC 110...	[more]

BLAST of MS003308 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BY57	0.0e+00	99.38	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isof...	[more]
A0A6J1BXN8	0.0e+00	94.84	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic isof...	[more]
A0A0A0KSL6	3.3e-294	82.55	AAA domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G643270 PE=3 SV...	[more]
A0A1S3C9P6	2.1e-293	82.55	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=C...	[more]
A0A6J1FHP5	6.9e-292	81.59	probable inactive ATP-dependent zinc metalloprotease FTSHI 3, chloroplastic OS=C...	[more]

BLAST of MS003308 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G02450.1	1.6e-208	68.86	cell division protein ftsH, putative	[more]
AT5G58870.1	8.5e-77	44.52	FTSH protease 9	[more]
AT5G15250.1	1.9e-76	49.70	FTSH protease 6	[more]
AT1G50250.1	1.6e-75	58.05	FTSH protease 1	[more]
AT3G47060.1	2.1e-75	59.46	FTSH protease 7	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR003593	AAA+ ATPase domain	SMART	SM00382	AAA_5	coord: 383..519 e-value: 1.6E-21 score: 87.5
IPR011546	Peptidase M41, FtsH extracellular	PFAM	PF06480	FtsH_ext	coord: 161..300 e-value: 5.3E-14 score: 52.5
IPR003959	ATPase, AAA-type, core	PFAM	PF00004	AAA	coord: 387..516 e-value: 1.9E-44 score: 151.3
IPR041569	AAA ATPase, AAA+ lid domain	PFAM	PF17862	AAA_lid_3	coord: 547..585 e-value: 3.6E-12 score: 45.9
None	No IPR available	GENE3D	1.10.8.60		coord: 518..604 e-value: 4.7E-22 score: 79.8
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 219..247
None	No IPR available	PANTHER	PTHR23076:SF110	INACTIVE ATP-DEPENDENT ZINC METALLOPROTEASE FTSHI 3, CHLOROPLASTIC-RELATED	coord: 81..640
None	No IPR available	PANTHER	PTHR23076	METALLOPROTEASE M41 FTSH	coord: 81..640
None	No IPR available	CDD	cd00009	AAA	coord: 384..517 e-value: 2.13619E-28 score: 109.158
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 330..516 e-value: 1.0E-65 score: 223.1
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 349..589
IPR003960	ATPase, AAA-type, conserved site	PROSITE	PS00674	AAA	coord: 487..505

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003308.1	MS003308.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0005524	ATP binding
molecular_function	GO:0004176	ATP-dependent peptidase activity
molecular_function	GO:0016887	ATP hydrolysis activity
molecular_function	GO:0004222	metalloendopeptidase activity
molecular_function	GO:0008270	zinc ion binding