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MS003282 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AGCAAGGCAAAGGCAGGCCCCCCGAAGCACCAAAACAGATACGCCTGGAAACCAAACGCCGGCGTCAAAATCAACGAAACTGTAATCCCCCATTTCATCACCTTTCGATTTCTCCATCTTCTGTTTCTTCTTACTTTCGAAATCTTCTACAGGAGGTTGGAGGCAGGTTCCGCCCGCTTTCCCAGATCACCGGAGTTTGCCTTCGCTGCAAGGACCAAATCGATTGGAAACGCCGCTACGGCAAGTACAAACCCCTTGCCGAACCCGCCAAATGGTATTTCTTTACACTTTTGTTTTTATCTCTCCCTGAGCTTGGATTGTTGCGGAATTGATTTAATGTATTGCAGTCAACTATGTTCCAAGCGGGCTGTTCGTCAAGCCTATCATAATCTCTGCCCTGGTTAGTTTAACTATATCAATAGCTTGATTGTTTATGTGGGTTTTGTTTTTCATGAACTAAATTGCTAGGGGGAAACATATCAAATTCAGTTCAATCTCTGTACATGTGCGTGCTAAGTTTTCTACTTGGAATTGATGTTCATTCATATAGGCTGTGCCAAAGAGCAAGGTGTGTGCGCGAAGTGTCGTTGTCGTGTAGACCATACTGTTGGAAGG AGCAAGGCAAAGGCAGGCCCCCCGAAGCACCAAAACAGATACGCCTGGAAACCAAACGCCGGCGTCAAAATCAACGAAACTGAGGTTGGAGGCAGGTTCCGCCCGCTTTCCCAGATCACCGGAGTTTGCCTTCGCTGCAAGGACCAAATCGATTGGAAACGCCGCTACGGCAAGTACAAACCCCTTGCCGAACCCGCCAAATGTCAACTATGTTCCAAGCGGGCTGTTCGTCAAGCCTATCATAATCTCTGCCCTGGCTGTGCCAAAGAGCAAGGTGTGTGCGCGAAGTGTCGTTGTCGTGTAGACCATACTGTTGGAAGG AGCAAGGCAAAGGCAGGCCCCCCGAAGCACCAAAACAGATACGCCTGGAAACCAAACGCCGGCGTCAAAATCAACGAAACTGAGGTTGGAGGCAGGTTCCGCCCGCTTTCCCAGATCACCGGAGTTTGCCTTCGCTGCAAGGACCAAATCGATTGGAAACGCCGCTACGGCAAGTACAAACCCCTTGCCGAACCCGCCAAATGTCAACTATGTTCCAAGCGGGCTGTTCGTCAAGCCTATCATAATCTCTGCCCTGGCTGTGCCAAAGAGCAAGGTGTGTGCGCGAAGTGTCGTTGTCGTGTAGACCATACTGTTGGAAGG SKAKAGPPKHQNRYAWKPNAGVKINETEVGGRFRPLSQITGVCLRCKDQIDWKRRYGKYKPLAEPAKCQLCSKRAVRQAYHNLCPGCAKEQGVCAKCRCRVDHTVGR Homology
BLAST of MS003282 vs. NCBI nr
Match: XP_022133854.1 (uncharacterized protein LOC111006305 [Momordica charantia]) HSP 1 Score: 236.9 bits (603), Expect = 8.2e-59 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MS003282 vs. NCBI nr
Match: XP_008459394.1 (PREDICTED: uncharacterized protein LOC103498541 [Cucumis melo]) HSP 1 Score: 218.8 bits (556), Expect = 2.3e-53 Identity = 98/104 (94.23%), Postives = 99/104 (95.19%), Query Frame = 0
BLAST of MS003282 vs. NCBI nr
Match: KAG6602535.1 (Eukaryotic translation initiation factor 3 subunit M, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS003282 vs. NCBI nr
Match: XP_004141470.1 (uncharacterized protein LOC101206376 [Cucumis sativus] >KGN52523.1 hypothetical protein Csa_008256 [Cucumis sativus]) HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52 Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of MS003282 vs. NCBI nr
Match: KAG7033212.1 (hypothetical protein SDJN02_07266 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 216.1 bits (549), Expect = 1.5e-52 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS003282 vs. ExPASy Swiss-Prot
Match: Q96MD7 (Uncharacterized protein C9orf85 OS=Homo sapiens OX=9606 GN=C9orf85 PE=1 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 3.4e-15 Identity = 39/101 (38.61%), Postives = 62/101 (61.39%), Query Frame = 0
BLAST of MS003282 vs. ExPASy Swiss-Prot
Match: Q9CQ90 (Uncharacterized protein C9orf85 homolog OS=Mus musculus OX=10090 PE=2 SV=1) HSP 1 Score: 80.1 bits (196), Expect = 1.7e-14 Identity = 37/95 (38.95%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of MS003282 vs. ExPASy Swiss-Prot
Match: Q68FU5 (Uncharacterized protein C9orf85 homolog OS=Rattus norvegicus OX=10116 PE=1 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 4.9e-14 Identity = 36/95 (37.89%), Postives = 58/95 (61.05%), Query Frame = 0
BLAST of MS003282 vs. ExPASy TrEMBL
Match: A0A6J1BX54 (uncharacterized protein LOC111006305 OS=Momordica charantia OX=3673 GN=LOC111006305 PE=4 SV=1) HSP 1 Score: 236.9 bits (603), Expect = 4.0e-59 Identity = 107/107 (100.00%), Postives = 107/107 (100.00%), Query Frame = 0
BLAST of MS003282 vs. ExPASy TrEMBL
Match: A0A1S3CAL0 (uncharacterized protein LOC103498541 OS=Cucumis melo OX=3656 GN=LOC103498541 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 1.1e-53 Identity = 98/104 (94.23%), Postives = 99/104 (95.19%), Query Frame = 0
BLAST of MS003282 vs. ExPASy TrEMBL
Match: A0A6J1JP90 (ribosome biogenesis protein BOP1 homolog isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487658 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 7.2e-53 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS003282 vs. ExPASy TrEMBL
Match: A0A0A0KSJ8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640570 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 7.2e-53 Identity = 96/104 (92.31%), Postives = 98/104 (94.23%), Query Frame = 0
BLAST of MS003282 vs. ExPASy TrEMBL
Match: A0A6J1GR32 (glutamic acid-rich protein isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111456734 PE=4 SV=1) HSP 1 Score: 216.1 bits (549), Expect = 7.2e-53 Identity = 95/105 (90.48%), Postives = 101/105 (96.19%), Query Frame = 0
BLAST of MS003282 vs. TAIR 10
Match: AT3G02220.1 (unknown protein; CONTAINS InterPro DOMAIN/s: Protein of unknown function DUF2039 (InterPro:IPR019351); Has 215 Blast hits to 215 proteins in 94 species: Archae - 2; Bacteria - 2; Metazoa - 125; Fungi - 4; Plants - 38; Viruses - 0; Other Eukaryotes - 44 (source: NCBI BLink). ) HSP 1 Score: 174.5 bits (441), Expect = 4.6e-44 Identity = 77/105 (73.33%), Postives = 87/105 (82.86%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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