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MS003280 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GGTCGTGTTTTTCCGGCAGTGGCAGTAGTGGCGGCGATGATGGTGGTGTTCCTCTCTTCCAGCCATTGCAGGGCTTCGATTCTGATGAAGGCCAACGCCAGCTACGGCTGCGGCGGCGGCGGAGAATGTTTGGGAATCTCGGAGGCGGTGGCGGCGGAGTTCATGGTGGGAAGCCACGTGGCGCGGTTTCTGGATTTTGAAGATAACAAACCGAAAACGGACGAGACGAAAAATCCTAATGTGCAGACGTGTCAGAGCGGCGCCGGAAACGCTGGAGGCGCCTGCAACGGCGACCCCAACAGTAAAAAGGACTGCCCCAAGTACACCGGCTCCGCCACCTGC GGTCGTGTTTTTCCGGCAGTGGCAGTAGTGGCGGCGATGATGGTGGTGTTCCTCTCTTCCAGCCATTGCAGGGCTTCGATTCTGATGAAGGCCAACGCCAGCTACGGCTGCGGCGGCGGCGGAGAATGTTTGGGAATCTCGGAGGCGGTGGCGGCGGAGTTCATGGTGGGAAGCCACGTGGCGCGGTTTCTGGATTTTGAAGATAACAAACCGAAAACGGACGAGACGAAAAATCCTAATGTGCAGACGTGTCAGAGCGGCGCCGGAAACGCTGGAGGCGCCTGCAACGGCGACCCCAACAGTAAAAAGGACTGCCCCAAGTACACCGGCTCCGCCACCTGC GGTCGTGTTTTTCCGGCAGTGGCAGTAGTGGCGGCGATGATGGTGGTGTTCCTCTCTTCCAGCCATTGCAGGGCTTCGATTCTGATGAAGGCCAACGCCAGCTACGGCTGCGGCGGCGGCGGAGAATGTTTGGGAATCTCGGAGGCGGTGGCGGCGGAGTTCATGGTGGGAAGCCACGTGGCGCGGTTTCTGGATTTTGAAGATAACAAACCGAAAACGGACGAGACGAAAAATCCTAATGTGCAGACGTGTCAGAGCGGCGCCGGAAACGCTGGAGGCGCCTGCAACGGCGACCCCAACAGTAAAAAGGACTGCCCCAAGTACACCGGCTCCGCCACCTGC GRVFPAVAVVAAMMVVFLSSSHCRASILMKANASYGCGGGGECLGISEAVAAEFMVGSHVARFLDFEDNKPKTDETKNPNVQTCQSGAGNAGGACNGDPNSKKDCPKYTGSATC Homology
BLAST of MS003280 vs. NCBI nr
Match: KAG6578548.1 (hypothetical protein SDJN03_22996, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 76.6 bits (187), Expect = 1.5e-10 Identity = 47/112 (41.96%), Postives = 66/112 (58.93%), Query Frame = 0
BLAST of MS003280 vs. NCBI nr
Match: KAA0039429.1 (hypothetical protein E6C27_scaffold64G002360 [Cucumis melo var. makuwa] >TYK00618.1 hypothetical protein E5676_scaffold169G002380 [Cucumis melo var. makuwa]) HSP 1 Score: 67.0 bits (162), Expect = 1.2e-07 Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 0
BLAST of MS003280 vs. NCBI nr
Match: KGN52518.1 (hypothetical protein Csa_007870 [Cucumis sativus]) HSP 1 Score: 64.7 bits (156), Expect = 5.9e-07 Identity = 39/109 (35.78%), Postives = 57/109 (52.29%), Query Frame = 0
BLAST of MS003280 vs. NCBI nr
Match: KGN52519.1 (hypothetical protein Csa_008872 [Cucumis sativus]) HSP 1 Score: 64.3 bits (155), Expect = 7.7e-07 Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of MS003280 vs. NCBI nr
Match: KAA0039430.1 (hypothetical protein E6C27_scaffold64G002370 [Cucumis melo var. makuwa] >TYK00619.1 hypothetical protein E5676_scaffold169G002390 [Cucumis melo var. makuwa]) HSP 1 Score: 63.2 bits (152), Expect = 1.7e-06 Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 0
BLAST of MS003280 vs. ExPASy TrEMBL
Match: A0A5D3BNE4 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002380 PE=4 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 5.8e-08 Identity = 41/109 (37.61%), Postives = 59/109 (54.13%), Query Frame = 0
BLAST of MS003280 vs. ExPASy TrEMBL
Match: A0A0A0KSJ4 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640520 PE=4 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 2.9e-07 Identity = 39/109 (35.78%), Postives = 57/109 (52.29%), Query Frame = 0
BLAST of MS003280 vs. ExPASy TrEMBL
Match: A0A0A0KUG7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640530 PE=4 SV=1) HSP 1 Score: 64.3 bits (155), Expect = 3.7e-07 Identity = 39/109 (35.78%), Postives = 55/109 (50.46%), Query Frame = 0
BLAST of MS003280 vs. ExPASy TrEMBL
Match: A0A5D3BR80 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002390 PE=4 SV=1) HSP 1 Score: 63.2 bits (152), Expect = 8.3e-07 Identity = 36/108 (33.33%), Postives = 55/108 (50.93%), Query Frame = 0
BLAST of MS003280 vs. ExPASy TrEMBL
Match: A0A0A0KVT8 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G640510 PE=4 SV=1) HSP 1 Score: 57.4 bits (137), Expect = 4.6e-05 Identity = 37/107 (34.58%), Postives = 51/107 (47.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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