MS003278 (gene) Bitter gourd (TR) v1

Overview


Name	MS003278
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Eukaryotic translation initiation factor 3 subunit M
Location	scaffold234: 1733065 .. 1737210 (+)
RNA-Seq Expression	MS003278
Synteny	MS003278

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGACGACTGTGGTTCAAACCTCCGAAGAAGATCCGGCGCTCACCGTCGTCCGCTTTGCCTCTGAGCTGGCTTGGGCCGACGCCGGTCCTGAGGTTTCATTTTTCTTCTCTCTTTCAAATCAATTTGCTACTTTGCCAGCGCCGTTCATACCTTGAGTTTGTGGCCGCCTCTAGGTTTTACAACTTCATCAATTTGTTTCTTTCACAATCGTCTATATTGATTTTTTTGTTTAATTTCATTCAGGAGTATGGTTATTGATGTATACTATTGGAATTTGAAAATTATAATGAGTTGTAACGATCTAGAGGGCCTGCATAATGCAGTGCTTGCTATATGTAGTTCTGGTAATTTGCGAAGGTTATGTGATGGCAAATGTTTCACCACATACGTCTGAAGTCGTGGGAAAAGGGTGGTTATTGAGCACTGAGAAGATATTCGTCTCTCAGTATAGTTTTGCATAACCTTGTTATGCCAGTATGGCTTGCGATATAATTTTAGGTGCTTTTTTATCCGTTCACAAGCAAAAAGTTCAGAAAAAGGCGTATTGCTTGTATATATTTTCATGATAATTTGGTCTTTTGTCTATGATGTGTATATTTGGAACGAATCGAGATTTGACATACTATTCTGGTTAGTCCTGGGGAATGATTAATTGGTGTTTGATGATTTTTGTAGGCTGCTGAGCCACAAGTTAATAGACTTTGCAACGAAGCTCAAGAATGTATGGTTATGGGAAGATGGTTTGATCTGGCATCTCTAATGCTTACTTCTGCTGACTTGATATTTTCAAAGGTGTCTGAAAAAGGTAAATGTAGTTTGACATTGAAAAATAAGAATGACTCTGTAGGATTTTTTTTTTATATTTTTTATTTTTGTGGGAGGGGTATCTGTATTTTGTCTTCAAGAGTTTAAATTGTAGCATTATGAAATGAAAGGTAGTTGAGGTTGCTTCTTTTATTGTTGCTTATTGATGCCTGTGAGTCCGTGACTTTCAACTCGAACCATAAGAATGTCAGTGTGGAGGCAAGATGTTAGTAAAAAGAAAGTGGAGGAGAAGATGTGCTTCATGGTTACCCATATTTGGTCTTCAATGTTGGTTTTATCTGTATTCTAACTTCAAGAGTTTAAATTGTTTCATTATGAAATGAAAGGTAGTTGAGGTTGCTTCTTTTATTGTTGCCTGCGAGTCTGTTATTTTCTTCTGGAACTATAAGAACGTCGGTGTGGAGCCAATATTTTAGTGAAAAGATAGTTGAGGAGAAAATGTGCTTCATGGTTATCCATATTCGGTCTTCAATGCTGGTTTTAGTCTGATGAGGTTGTGGTCCCTCTATCATCCTGGCAAGATGATCTGCATACACTTATACAGTGATTTTCTTTGGCAACAGATCTTGAGTGTGTATTCACTGTTATCTGCAATCTTGTCACCAAGGCTGGAAGTCCAGATGAATCACTTGAAATGGCAAAGCTTATATCTGCAAAGATTGTTCAACAGCCAACTGACAAACCTGCACTGCGCTTGAAAATGTACGCTCTTTAAACTTGGATATTTTGATTGTAAGATCTTGACTCTTCTTTTTTCTCATTCTCAAGTTTTCCTCTTTTACAGATTGTTCAATCTCTACAACCTACTCGAGAATCCATATAGCCGGTTCCATGTTTACATGAAGGCACTTGATTTAGCTCTCAAGGGGAAGGCCCCTGAATATATAATTCCATCATTAAAAAAGATAGAGAGTTTCTTGAGAGAGTGGAATGTTGGAATCATAGAGCAGAGAGAACTTTTCCTCGCCATCGCTAGTGTATTGAAAGAAAGTAAGAGGTACTACAGAATGAATGATGTCTCTAAATGAGTTATACTTATTTTGTCTTTACTTTTCACTATTTCGTATCTCTTATGTTTTTATTTTGATATGAGCGATTTGTTTACTCTTACCAATAATATAAAACTAATTTATGATTGACAACTTCTCTTTGATTTCAGTTCTGCAAATGATTATTTCAAGTTCCTTACCAAATATTTGGCCACTTTCTCTGGTGAAGATGCCTATATCTTGAGTGAAGCTAAGGAGGAAGCTGCTCGTGCAATAGTTGAATTTGTGAAGGCACCTAACATGTTTCGGGTATTTTACTGTCTTTTGTAATGTAATCTATTTTTAAGCTATTTACCATAGTTCAAGCAACTTATTACATTGTTCCAATACGTTCTAGTTGATTCTGTATCATGTCTAGGACTATGAAAACTCTTATTGGTAAATTTTTGGTTCATCCATTGATGGGCTCTTTCTGACATAACTACTAGCTACTTAATTCCTCAGCATGGTTTTGGGCTTGAGATTCATGGGGCCAATTGTTATATTGGTTCAAACTTCTATCCGACATCCAGTGTTCAAGACTCAAATAGAAACCTTGCCTATTGGGAAGGGTTTATGAGGTGAAGGCTCGATGCATCTGTGGTTCGCCGATTTGGGATTGACTGTAGCAGGGAATCCTCCTGTCTCATTCTGTAAAATCTGGAGAGAAAGAATCTTAGATTAATTTTTGGATAGATAACCAACCGTTAATGCACAACCTCCTGATTTTTTGCCATTTCTGGGCTGAAAGATATCACAGTTGAAGGTACTTGGGAGGATAATACTATCTTGCATCATTTTGACTGGTAGAAAAGAAAACTGAGTGAGGAGGAAGTGGGTGCTTTTAGGCAACTTCTGGCAATATTTAATAGGGTTAATCCTGACATAGGTGAAAATAAAACCAAAAGGTGGTTGGGAACTTGTTGCAAAATTGAATCTTATTTTTCACATTCATTTTTGGGACTATGGTTTTCTGTACTTTGATGGTTGAATCTTTTTGTAATTTTTTATTATATTTTTTGAGAGAATGTTTCATCCTTTTTTTCTTGTAGTGCTTCTCATATTAATTCTGATTCTTGGTTTCTATAAAAAAGGGTATTAATATTTTTCTTTAAAATGTTTTTCAGACTGCAAGAAAGTTTCAGGGATGCATTCTTGTTATTGGCTTGTTTATTTCTATTGGCTACTAAATTAAGTTTAGGAGCAGATTTTTCTCAATAACTTGATTCCACATTGATATTTCAAATTTGATTTTTAGCCAATATTATTGACTTAATAGCCAAAAACTGTTCTCTACGTTTGCAGTGTGATTTGCTAGATATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTAAAGATTTTTCTGACTCAGAGACTAGATGCTTACTTGGAATTTCATGCCGCTAATTCGACTTTATTGAAAAGCTATGGTAAATTTCTCAACTCTAGTGATAACTCTAGTCATTAGAGCTAAATTTTGTACTCATGCTTGCTGGCTTTATTCCTTACCGTGGTGTAGGTCTCGTCCATGAAGACTGTATAGCAAAAATGAGATTATTGTCATTGGTGGATCTTGGCTCAAATGACTCTGCCCGCATTCCATATGCTCTCATTAAGGACGCGCTGAGGGTGGATAAACTTCCCCTTTTCCAGGCTTCTCTTTCATATATTATTTTGTGATCTGGGTGTGATCTGTGTTTCAGATCAATGATGATGAGGTGGAACTGTGGGTGGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGAAGTTGTGATTGTGAGGTGTGTGCTACACATTATTCACATCGCTGCAACGCACTTCTATGGTTATTCATAGCTTATTTTGTACTAAGAACTTTTTGATGTTCATGTGCAGCCGCTCAACCGAGCGTGTATTTGGGCAGCAACAATGGGAAACGCTTAGGACGAGGTTAGCTACATGGAGGGTAAGTAATCTCTTCTGTTTCTCTTTTAATATAAAAAAAATATCTCATAGGTTGTCAAGCTCTTCCTTTATCAACATTACCTTTTCTTAGGCAACATACAATCCAGTCATTAACTCTTGAGATTTTAATTTTGCAAGTAGTAGTTAGCTCCGCCTCTCCTTTTTCGCCTTCCATTATGTCGTATTGCAACACACTATGGTTGGTGTCTTTGCAGGGTAATATCGCGAATGTCATTGGCACCATTCGAGCAAACAAAATCATCGATGATGGATCACAGGGTATGCAAGGTTTAGCGATCCGT

mRNA sequence

ATGACGACTGTGGTTCAAACCTCCGAAGAAGATCCGGCGCTCACCGTCGTCCGCTTTGCCTCTGAGCTGGCTTGGGCCGACGCCGGTCCTGAGGCTGCTGAGCCACAAGTTAATAGACTTTGCAACGAAGCTCAAGAATGTATGGTTATGGGAAGATGGTTTGATCTGGCATCTCTAATGCTTACTTCTGCTGACTTGATATTTTCAAAGGTGTCTGAAAAAGATCTTGAGTGTGTATTCACTGTTATCTGCAATCTTGTCACCAAGGCTGGAAGTCCAGATGAATCACTTGAAATGGCAAAGCTTATATCTGCAAAGATTGTTCAACAGCCAACTGACAAACCTGCACTGCGCTTGAAAATATTGTTCAATCTCTACAACCTACTCGAGAATCCATATAGCCGGTTCCATGTTTACATGAAGGCACTTGATTTAGCTCTCAAGGGGAAGGCCCCTGAATATATAATTCCATCATTAAAAAAGATAGAGAGTTTCTTGAGAGAGTGGAATGTTGGAATCATAGAGCAGAGAGAACTTTTCCTCGCCATCGCTAGTGTATTGAAAGAAAGTAAGAGTTCTGCAAATGATTATTTCAAGTTCCTTACCAAATATTTGGCCACTTTCTCTGGTGAAGATGCCTATATCTTGAGTGAAGCTAAGGAGGAAGCTGCTCGTGCAATAGTTGAATTTGTGAAGGCACCTAACATGTTTCGGTGTGATTTGCTAGATATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTAAAGATTTTTCTGACTCAGAGACTAGATGCTTACTTGGAATTTCATGCCGCTAATTCGACTTTATTGAAAAGCTATGGTCTCGTCCATGAAGACTGTATAGCAAAAATGAGATTATTGTCATTGGTGGATCTTGGCTCAAATGACTCTGCCCGCATTCCATATGCTCTCATTAAGGACGCGCTGAGGATCAATGATGATGAGGTGGAACTGTGGGTGGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGAAGTTGTGATTGTGAGCCGCTCAACCGAGCGTGTATTTGGGCAGCAACAATGGGAAACGCTTAGGACGAGGTTAGCTACATGGAGGGGTAATATCGCGAATGTCATTGGCACCATTCGAGCAAACAAAATCATCGATGATGGATCACAGGGTATGCAAGGTTTAGCGATCCGT

Coding sequence (CDS)

ATGACGACTGTGGTTCAAACCTCCGAAGAAGATCCGGCGCTCACCGTCGTCCGCTTTGCCTCTGAGCTGGCTTGGGCCGACGCCGGTCCTGAGGCTGCTGAGCCACAAGTTAATAGACTTTGCAACGAAGCTCAAGAATGTATGGTTATGGGAAGATGGTTTGATCTGGCATCTCTAATGCTTACTTCTGCTGACTTGATATTTTCAAAGGTGTCTGAAAAAGATCTTGAGTGTGTATTCACTGTTATCTGCAATCTTGTCACCAAGGCTGGAAGTCCAGATGAATCACTTGAAATGGCAAAGCTTATATCTGCAAAGATTGTTCAACAGCCAACTGACAAACCTGCACTGCGCTTGAAAATATTGTTCAATCTCTACAACCTACTCGAGAATCCATATAGCCGGTTCCATGTTTACATGAAGGCACTTGATTTAGCTCTCAAGGGGAAGGCCCCTGAATATATAATTCCATCATTAAAAAAGATAGAGAGTTTCTTGAGAGAGTGGAATGTTGGAATCATAGAGCAGAGAGAACTTTTCCTCGCCATCGCTAGTGTATTGAAAGAAAGTAAGAGTTCTGCAAATGATTATTTCAAGTTCCTTACCAAATATTTGGCCACTTTCTCTGGTGAAGATGCCTATATCTTGAGTGAAGCTAAGGAGGAAGCTGCTCGTGCAATAGTTGAATTTGTGAAGGCACCTAACATGTTTCGGTGTGATTTGCTAGATATGCCTGCTGTAGGGCAACTGGAGAAGGATGCCAAATATTCATTGGTTTATCAGCTTCTAAAGATTTTTCTGACTCAGAGACTAGATGCTTACTTGGAATTTCATGCCGCTAATTCGACTTTATTGAAAAGCTATGGTCTCGTCCATGAAGACTGTATAGCAAAAATGAGATTATTGTCATTGGTGGATCTTGGCTCAAATGACTCTGCCCGCATTCCATATGCTCTCATTAAGGACGCGCTGAGGATCAATGATGATGAGGTGGAACTGTGGGTGGTGAAGGCCATTACTTCCAAATTGATTGACTGCAAAATGGACCAGATGAATGAAGTTGTGATTGTGAGCCGCTCAACCGAGCGTGTATTTGGGCAGCAACAATGGGAAACGCTTAGGACGAGGTTAGCTACATGGAGGGGTAATATCGCGAATGTCATTGGCACCATTCGAGCAAACAAAATCATCGATGATGGATCACAGGGTATGCAAGGTTTAGCGATCCGT

Protein sequence

MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLMLTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLKILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELFLAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCDLLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMRLLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRSTERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR

Homology

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BLAST of MS003278 vs. NCBI nr
Match: XP_022134057.1 (eukaryotic translation initiation factor 3 subunit M-like [Momordica charantia])

HSP 1 Score: 791.6 bits (2043), Expect = 3.3e-225
Identity = 408/410 (99.51%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M+TVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM
Sbjct: 1   MSTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLALKGKAPE+IIPSLKKIESFLREWNVGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEHIIPSLKKIESFLREWNVGIIEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD
Sbjct: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS
Sbjct: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR
Sbjct: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 410

[Close]

BLAST of MS003278 vs. NCBI nr
Match: TYK00620.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa])

HSP 1 Score: 738.8 bits (1906), Expect = 2.5e-209
Identity = 376/410 (91.71%), Postives = 392/410 (95.61%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMVMGRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTKAGSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLA KGKAPE+IIP+LKKIESFLREWN+GI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAI++VLKESKSSANDYFKFLTKYLATFSGEDA  LSEAKEEA  AIVEFVKAPNMF+CD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAY+EF AANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSN+SARIPYALIKD L+INDDEVELWVVKAITSKLIDCKMDQMNEVVIVSR 
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           T+RVFGQ QWETLRT+L TWRGNIANVIGTIRANKI++DGSQ MQGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of MS003278 vs. NCBI nr
Match: XP_008459389.1 (PREDICTED: eukaryotic translation initiation factor 3 subunit M [Cucumis melo])

HSP 1 Score: 736.9 bits (1901), Expect = 9.6e-209
Identity = 375/410 (91.46%), Postives = 391/410 (95.37%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMVMGRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTKAGSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLA KGKAPE+IIP+LKKIESFLREWN+GI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAI++VLKESKSSANDYFKFLTKYLATFSGEDA  LSEAKEEA  AIVEFVKAPNMF+CD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAY+EF AANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSN+SARIPYALIKD L+ NDDEVELWVVKAITSKLIDCKMDQMNEVVIVSR 
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQTNDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           T+RVFGQ QWETLRT+L TWRGNIANVIGTIRANKI++DGSQ MQGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of MS003278 vs. NCBI nr
Match: XP_011656013.1 (eukaryotic translation initiation factor 3 subunit M [Cucumis sativus] >KGN52516.1 hypothetical protein Csa_008071 [Cucumis sativus])

HSP 1 Score: 735.7 bits (1898), Expect = 2.1e-208
Identity = 374/410 (91.22%), Postives = 391/410 (95.37%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMV+GRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTKAGSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLA KGKAPE+IIP+LKKIESFLREWN+GI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAI++VLKESKSSANDYFKFLTKYLATFSGEDA  LSEAKEEA  AIVEFVKAPNMF+CD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAY+EF A NS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQATNSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSN+SARIPYALIKD L+INDDEVELWVVKAITSKLIDCKMDQMNEVVIVSR 
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           T+RVFGQ QWETLRT+L TWRGNIANVIGTIRANKI++DGSQ MQGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of MS003278 vs. NCBI nr
Match: XP_038889188.1 (eukaryotic translation initiation factor 3 subunit M-like [Benincasa hispida])

HSP 1 Score: 734.6 bits (1895), Expect = 4.8e-208
Identity = 375/411 (91.24%), Postives = 392/411 (95.38%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMVMGRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTK+GSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKSGSPDESLEMAKLISAKISQQPNDKPALRLK 120

Query: 121 ILFNLYNLLEN-PYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQREL 180
           ILFNLYNLLEN PYSRFHVYMKALDLA KGKAPE+I+PSLKKIESFLREWN+GI+EQREL
Sbjct: 121 ILFNLYNLLENHPYSRFHVYMKALDLAFKGKAPEHILPSLKKIESFLREWNIGIVEQREL 180

Query: 181 FLAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRC 240
           FLAIA+VLKESKSSANDYFKFLTKYL TFSGEDA+ L+EAKEEA  AIVEFVKAPNMF+C
Sbjct: 181 FLAIANVLKESKSSANDYFKFLTKYLVTFSGEDAHTLNEAKEEAVHAIVEFVKAPNMFKC 240

Query: 241 DLLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKM 300
           DLLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLD YLEF AANSTLLKSYGLVHEDCIAKM
Sbjct: 241 DLLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDTYLEFQAANSTLLKSYGLVHEDCIAKM 300

Query: 301 RLLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSR 360
           RLLSL+DLGSN+SARIPYALIKD LRINDDEVELWVVKAITSKL+DCKMDQMNEVVIVSR
Sbjct: 301 RLLSLLDLGSNESARIPYALIKDTLRINDDEVELWVVKAITSKLMDCKMDQMNEVVIVSR 360

Query: 361 STERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
            T+RVFGQ QWETLRT+LATWRGNIANVIGTIRANKI++DGSQ MQGLAIR
Sbjct: 361 CTDRVFGQHQWETLRTKLATWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 411

[Close]

BLAST of MS003278 vs. ExPASy Swiss-Prot
Match: Q54KZ8 (Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum OX=44689 GN=eif3m PE=1 SV=1)

HSP 1 Score: 217.6 bits (553), Expect = 2.6e-55
Identity = 123/346 (35.55%), Postives = 208/346 (60.12%), Query Frame = 0


Query: 56  LASLMLTSADLIFS--KVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTD 115
           L+ ++    + +F   K S+KD+E  F VI  ++ K  + DE   +++ I   +   PT+
Sbjct: 50  LSKIVSNETEFLFKECKDSDKDIEGFFNVILTILHKLENEDEINIVSQKIRDSLSAHPTE 109

Query: 116 KPALRLKILFNLYNLLE-NPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVG 175
              L++KIL NL+N  +     R+ ++   + LA      E++   +  I+S+L +WNV 
Sbjct: 110 NSQLKIKILTNLFNSFQPKSTQRYDIFFALVKLASDSNNLEFVKYQITDIDSWLEDWNVS 169

Query: 176 IIEQRELFLAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVK 235
           I ++R+L+  I+++ KE +   +   +FL KYL TF+ ED+    EA+E+A R  +E + 
Sbjct: 170 IQQKRKLYKLISNIFKEKQRMLS--HQFLVKYLQTFTKEDS---QEAQEDAVRVCIESIS 229

Query: 236 APNMFRCD-LLDMPAVGQLEKD--AKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYG 295
              +++ D LLD+PAV  LE    +  SL Y+L+KIF T++LD++L+F   N   L + G
Sbjct: 230 LQELYQSDYLLDLPAVQYLEGSTVSANSLTYELMKIFATEQLDSFLQFQQKNPNFLSTIG 289

Query: 296 LVHEDCIAKMRLLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMD 355
           L ++DC+ K+RLLSL  L S  S ++PY+LI   L+I+++EVE+WV+ A+   L+D K+D
Sbjct: 290 LSNDDCLQKIRLLSLATLTSEQS-KVPYSLISKMLQIDENEVEMWVINAMEGDLLDAKLD 349

Query: 356 QMNEVVIVSRSTERVFGQQQWETLRTRLATWRGNIANVIGTIRANK 396
           Q+N +V V+ ST+RVF + QW  L  R + W+ ++ N++  I   K
Sbjct: 350 QLNRIVNVNSSTQRVFNKSQWSQLGQRFSVWKSSVKNLLQVIENAK 389

[Close]

BLAST of MS003278 vs. ExPASy Swiss-Prot
Match: Q5ZJ64 (Eukaryotic translation initiation factor 3 subunit M OS=Gallus gallus OX=9031 GN=EIF3M PE=2 SV=1)

HSP 1 Score: 156.4 bits (394), Expect = 7.0e-37
Identity = 103/321 (32.09%), Postives = 186/321 (57.94%), Query Frame = 0


Query: 70  KVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQ-QPTDKPALRLKILFNLYNL 129
           K  +KD+E V   + +L+     PD+   + + +  K+V+ +  ++P+LRL++L NL++ 
Sbjct: 54  KEDDKDVESVMNSVVSLLLIL-EPDKQEALIESLCEKLVKFREGERPSLRLQLLSNLFHG 113

Query: 130 LE-NPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELFLAIASVL 189
           ++ N   R+ VY   L +A    A +YI   L ++  ++ +WN+   ++  L   +  VL
Sbjct: 114 MDKNTPVRYTVYCSLLKVASSCGAIQYIPTELDQVRKWISDWNLSTDKKHTLLRLLYDVL 173

Query: 190 KESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD-LLDMPA 249
            + K S +   K + + L +++ ++A   S+A+ +A R IV  +K PN F  D LL +  
Sbjct: 174 VDCKKS-DTAAKVMVELLGSYTEDNA---SQARVDAHRCIVRALKDPNTFLFDHLLALKP 233

Query: 250 VGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMRLLSLVD 309
           V  LE +    L++ LL IF++ +L +Y++F+  N   + S GL+HE  +AKMRLL+ + 
Sbjct: 234 VKFLEGE----LIHDLLTIFVSAKLVSYVKFYQNNKDFIDSLGLLHEQNMAKMRLLTFMG 293

Query: 310 LGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRSTERVFG 369
           + + ++  I +  ++  L+I  D+VE +V+ A+ +K++ CK+DQ    V+VS ST R FG
Sbjct: 294 M-AVENKEISFDTMQQELQIGADDVEAFVIDAVKTKMVYCKIDQTQRKVVVSHSTHRTFG 353

Query: 370 QQQWETLRTRLATWRGNIANV 388
           +QQW+ L   L TW+ N+  V
Sbjct: 354 KQQWQQLYDTLNTWKQNLNQV 364

[Close]

BLAST of MS003278 vs. ExPASy Swiss-Prot
Match: Q5R8C4 (Eukaryotic translation initiation factor 3 subunit M OS=Pongo abelii OX=9601 GN=EIF3M PE=2 SV=1)

HSP 1 Score: 152.9 bits (385), Expect = 7.8e-36
Identity = 105/340 (30.88%), Postives = 192/340 (56.47%), Query Frame = 0


Query: 51  GRWFDLASLMLTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQ- 110
           G   DLA ++   A  +  K  +KD+E V   + +L+     PD+   + + +  K+V+ 
Sbjct: 37  GLHIDLAQII--EACDVCLKEDDKDVESVMNSVVSLLLIL-EPDKQEALIESLCEKLVKF 96

Query: 111 QPTDKPALRLKILFNLYNLLE-NPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLRE 170
           +  ++P+LRL++L NL++ ++ N   R+ VY   + +A    A +YI   L ++  ++ +
Sbjct: 97  REGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISD 156

Query: 171 WNVGIIEQRELFLAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIV 230
           WN+   ++  L   +   L + K S +   K + + L +++ ++A   S+A+ +A R IV
Sbjct: 157 WNLTTEKKHTLLRLLYEALVDCKKS-DAASKVMVELLGSYTEDNA---SQARVDAHRCIV 216

Query: 231 EFVKAPNMFRCD-LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKS 290
             +K PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F+  N   + S
Sbjct: 217 RALKDPNAFLFDHLLTLKPVKFLEGE----LIHDLLTIFVSAKLASYVKFYQNNKDFIDS 276

Query: 291 YGLVHEDCIAKMRLLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCK 350
            GL+HE  +AKMRLL+ + + + ++  I +  ++  L+I  D+VE +V+ A+ +K++ CK
Sbjct: 277 LGLLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCK 336

Query: 351 MDQMNEVVIVSRSTERVFGQQQWETLRTRLATWRGNIANV 388
           +DQ    V+VS ST R FG+QQW+ L   L  W+ N+  V
Sbjct: 337 IDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKV 364

[Close]

BLAST of MS003278 vs. ExPASy Swiss-Prot
Match: Q7L2H7 (Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=EIF3M PE=1 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 1.0e-35
Identity = 105/340 (30.88%), Postives = 192/340 (56.47%), Query Frame = 0


Query: 51  GRWFDLASLMLTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQ- 110
           G   DLA ++   A  +  K  +KD+E V   + +L+     PD+   + + +  K+V+ 
Sbjct: 37  GLHVDLAQII--EACDVCLKEDDKDVESVMNSVVSLLLIL-EPDKQEALIESLCEKLVKF 96

Query: 111 QPTDKPALRLKILFNLYNLLE-NPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLRE 170
           +  ++P+LRL++L NL++ ++ N   R+ VY   + +A    A +YI   L ++  ++ +
Sbjct: 97  REGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISD 156

Query: 171 WNVGIIEQRELFLAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIV 230
           WN+   ++  L   +   L + K S +   K + + L +++ ++A   S+A+ +A R IV
Sbjct: 157 WNLTTEKKHTLLRLLYEALVDCKKS-DAASKVMVELLGSYTEDNA---SQARVDAHRCIV 216

Query: 231 EFVKAPNMFRCD-LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKS 290
             +K PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F+  N   + S
Sbjct: 217 RALKDPNAFLFDHLLTLKPVKFLEGE----LIHDLLTIFVSAKLASYVKFYQNNKDFIDS 276

Query: 291 YGLVHEDCIAKMRLLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCK 350
            GL+HE  +AKMRLL+ + + + ++  I +  ++  L+I  D+VE +V+ A+ +K++ CK
Sbjct: 277 LGLLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCK 336

Query: 351 MDQMNEVVIVSRSTERVFGQQQWETLRTRLATWRGNIANV 388
           +DQ    V+VS ST R FG+QQW+ L   L  W+ N+  V
Sbjct: 337 IDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKV 364

[Close]

BLAST of MS003278 vs. ExPASy Swiss-Prot
Match: Q99JX4 (Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN=Eif3m PE=1 SV=1)

HSP 1 Score: 150.2 bits (378), Expect = 5.0e-35
Identity = 104/340 (30.59%), Postives = 191/340 (56.18%), Query Frame = 0


Query: 51  GRWFDLASLMLTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQ- 110
           G   DLA ++   A  +  K  +KD+E V   + +L+     PD+   + + +  K+V+ 
Sbjct: 37  GLHVDLAQII--EACDVCLKEDDKDVESVMNSVVSLLLIL-EPDKQEALIESLCEKLVKF 96

Query: 111 QPTDKPALRLKILFNLYNLLE-NPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLRE 170
           +  ++P+LRL++L NL++ ++ N   R+ VY   + +A    A +YI   L ++  ++ +
Sbjct: 97  REGERPSLRLQLLSNLFHGMDKNTPVRYTVYCSLIKVAASCGAIQYIPTELDQVRKWISD 156

Query: 171 WNVGIIEQRELFLAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIV 230
           W +   ++  L   +   L + K S +   K + + L +++ ++A   S+A+ +A R IV
Sbjct: 157 WKLTTEKKHTLLRLLYEALVDCKKS-DAASKVMVELLGSYTEDNA---SQARVDAHRCIV 216

Query: 231 EFVKAPNMFRCD-LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKS 290
             +K PN F  D LL +  V  LE +    L++ LL IF++ +L +Y++F+  N   + S
Sbjct: 217 RALKDPNAFLFDHLLTLKPVKFLEGE----LIHDLLTIFVSAKLASYVKFYQNNKDFIDS 276

Query: 291 YGLVHEDCIAKMRLLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCK 350
            GL+HE  +AKMRLL+ + + + ++  I +  ++  L+I  D+VE +V+ A+ +K++ CK
Sbjct: 277 LGLLHEQNMAKMRLLTFMGM-AVENKEISFDTMQQELQIGADDVEAFVIDAVRTKMVYCK 336

Query: 351 MDQMNEVVIVSRSTERVFGQQQWETLRTRLATWRGNIANV 388
           +DQ    V+VS ST R FG+QQW+ L   L  W+ N+  V
Sbjct: 337 IDQTQRKVVVSHSTHRTFGKQQWQQLYDTLNAWKQNLNKV 364

[Close]

BLAST of MS003278 vs. ExPASy TrEMBL
Match: A0A6J1BYH7 (Eukaryotic translation initiation factor 3 subunit M OS=Momordica charantia OX=3673 GN=LOC111006423 PE=3 SV=1)

HSP 1 Score: 791.6 bits (2043), Expect = 1.6e-225
Identity = 408/410 (99.51%), Postives = 410/410 (100.00%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M+TVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM
Sbjct: 1   MSTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLALKGKAPE+IIPSLKKIESFLREWNVGIIEQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEHIIPSLKKIESFLREWNVGIIEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD
Sbjct: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS
Sbjct: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR
Sbjct: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 410

[Close]

BLAST of MS003278 vs. ExPASy TrEMBL
Match: A0A5D3BNN4 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold169G002400 PE=3 SV=1)

HSP 1 Score: 738.8 bits (1906), Expect = 1.2e-209
Identity = 376/410 (91.71%), Postives = 392/410 (95.61%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMVMGRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTKAGSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLA KGKAPE+IIP+LKKIESFLREWN+GI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAI++VLKESKSSANDYFKFLTKYLATFSGEDA  LSEAKEEA  AIVEFVKAPNMF+CD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAY+EF AANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSN+SARIPYALIKD L+INDDEVELWVVKAITSKLIDCKMDQMNEVVIVSR 
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           T+RVFGQ QWETLRT+L TWRGNIANVIGTIRANKI++DGSQ MQGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of MS003278 vs. ExPASy TrEMBL
Match: A0A1S3CA60 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo OX=3656 GN=LOC103498537 PE=3 SV=1)

HSP 1 Score: 736.9 bits (1901), Expect = 4.7e-209
Identity = 375/410 (91.46%), Postives = 391/410 (95.37%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMVMGRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTKAGSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLA KGKAPE+IIP+LKKIESFLREWN+GI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAI++VLKESKSSANDYFKFLTKYLATFSGEDA  LSEAKEEA  AIVEFVKAPNMF+CD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAY+EF AANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSN+SARIPYALIKD L+ NDDEVELWVVKAITSKLIDCKMDQMNEVVIVSR 
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQTNDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           T+RVFGQ QWETLRT+L TWRGNIANVIGTIRANKI++DGSQ MQGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of MS003278 vs. ExPASy TrEMBL
Match: A0A0A0KXL1 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis sativus OX=3659 GN=Csa_5G640010 PE=3 SV=1)

HSP 1 Score: 735.7 bits (1898), Expect = 1.0e-208
Identity = 374/410 (91.22%), Postives = 391/410 (95.37%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMV+GRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVIGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTKAGSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLA KGKAPE+IIP+LKKIESFLREWN+GI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAI++VLKESKSSANDYFKFLTKYLATFSGEDA  LSEAKEEA  AIVEFVKAPNMF+CD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAY+EF A NS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQATNSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDLGSN+SARIPYALIKD L+INDDEVELWVVKAITSKLIDCKMDQMNEVVIVSR 
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRC 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQGMQGLAIR 411
           T+RVFGQ QWETLRT+L TWRGNIANVIGTIRANKI++DGSQ MQGLAIR
Sbjct: 361 TDRVFGQHQWETLRTKLTTWRGNIANVIGTIRANKIVEDGSQAMQGLAIR 410

[Close]

BLAST of MS003278 vs. ExPASy TrEMBL
Match: A0A5A7TCS8 (Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold64G002380 PE=3 SV=1)

HSP 1 Score: 724.5 bits (1869), Expect = 2.4e-205
Identity = 376/436 (86.24%), Postives = 392/436 (89.91%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           M TVVQTSEED ALTVVRFASELAWADAGPE AEPQVNRLC EAQECMVMGRW DLASLM
Sbjct: 1   MATVVQTSEEDAALTVVRFASELAWADAGPETAEPQVNRLCVEAQECMVMGRWLDLASLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           LTSADLIFSKVSEKDLECVFT+ICNLVTKAGSPDESLEMAKLISAKI QQP DKPALRLK
Sbjct: 61  LTSADLIFSKVSEKDLECVFTIICNLVTKAGSPDESLEMAKLISAKICQQPNDKPALRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNLLENPYSRFHVYMKALDLA KGKAPE+IIP+LKKIESFLREWN+GI+EQRELF
Sbjct: 121 ILFNLYNLLENPYSRFHVYMKALDLAFKGKAPEHIIPTLKKIESFLREWNIGIVEQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAI++VLKESKSSANDYFKFLTKYLATFSGEDA  LSEAKEEA  AIVEFVKAPNMF+CD
Sbjct: 181 LAISNVLKESKSSANDYFKFLTKYLATFSGEDASTLSEAKEEAVHAIVEFVKAPNMFKCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAY+EF AANS+LLKSYGLVHEDCIAKMR
Sbjct: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYMEFQAANSSLLKSYGLVHEDCIAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKD--------------------------ALRINDDEVELW 360
           LLSLVDLGSN+SARIPYALIKD                           L+INDDEVELW
Sbjct: 301 LLSLVDLGSNESARIPYALIKDTLQVKRNFRFTCFSFCVFFFLMWVLLVLQINDDEVELW 360

Query: 361 VVKAITSKLIDCKMDQMNEVVIVSRSTERVFGQQQWETLRTRLATWRGNIANVIGTIRAN 411
           VVKAITSKLIDCKMDQMNEVVIVSR T+RVFGQ QWETLRT+L TWRGNIANVIGTIRAN
Sbjct: 361 VVKAITSKLIDCKMDQMNEVVIVSRCTDRVFGQHQWETLRTKLTTWRGNIANVIGTIRAN 420

[Close]

BLAST of MS003278 vs. TAIR 10
Match: AT5G15610.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 566.6 bits (1459), Expect = 1.6e-161
Identity = 277/413 (67.07%), Postives = 344/413 (83.29%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           MTT+V TSEEDP L +VRF S+LAWADAGPE AEP+V+RLC EA+E ++ G+W DLA+LM
Sbjct: 1   MTTIVPTSEEDPYLAIVRFTSQLAWADAGPEVAEPEVSRLCKEAEESIINGKWLDLATLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           +TSADL+ +K+SEKDLEC +T+ICNLV  A SP+E LEM K I+AK++QQP DK +LRLK
Sbjct: 61  VTSADLVSAKISEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNL+++P +RF VYMKAL+LA+ GK  EYI+PS KKI+SFL+EWN+ I +QRELF
Sbjct: 121 ILFNLYNLVDHPNARFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNIDIKDQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAIA VL+E+KS A +  +F+T YLATFS ED  +LSEAKEEA RA++EFVKAP++F+CD
Sbjct: 181 LAIAKVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLD PAV QLEKD   + VYQLLKIFLTQRLDAY+EF  ANS  L++YGLV EDC+AKMR
Sbjct: 241 LLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDL S+DS +IPYA IK+ L++ND+EVELWVVKAIT+KL+ CKMDQMN+VVIVSR 
Sbjct: 301 LLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVSRC 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQ---GMQGLAIR 411
            ER FGQ+QW++LRT+LA WR N+ NVI TI +NK  ++G+Q     QGL +R
Sbjct: 361 AEREFGQKQWQSLRTKLAAWRDNVRNVISTIESNKATEEGTQTSSAAQGLTVR 413

[Close]

BLAST of MS003278 vs. TAIR 10
Match: AT3G02200.2 (Proteasome component (PCI) domain protein )

HSP 1 Score: 558.5 bits (1438), Expect = 4.4e-159
Identity = 272/417 (65.23%), Postives = 350/417 (83.93%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           MTT+V TSEE+P L VVRF S+LAWADAGPEAAEP++ RLC EA+E MV  +W +L+SLM
Sbjct: 1   MTTIVPTSEENPFLAVVRFTSQLAWADAGPEAAEPEITRLCREAEESMVAEKWLELSSLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           +TSA+L+ SK+SEKDLEC +T+IC++V  A SP++ LEM K I++K+ QQP+DK +LRLK
Sbjct: 61  VTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNL+++PY+RF VYMKAL LA+ GK  EYI+ S KKI++FL+EWN+ I +QRELF
Sbjct: 121 ILFNLYNLVDHPYARFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEWNIDIKDQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAIA+VLKE+KS  N+  KFLTKYLATFS EDA +L EAKEEA RA++EFVKA ++F+CD
Sbjct: 181 LAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLD+PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EF  ANS  L+SYGL +EDC+ KMR
Sbjct: 241 LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIVSRS 360
           LLSLVDL S++S +IPY  IKD L++N+ +VELW+VKAIT+KLI+CKMDQMN+V+IVSRS
Sbjct: 301 LLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIVSRS 360

Query: 361 TERVFGQQQWETLRTRLATWRGNIANVIGTIRANKIIDDGSQ-------GMQGLAIR 411
           +ER FG +QW++LRT+LATW+ NI+++I TI +NK+ ++GSQ        +QGL++R
Sbjct: 361 SEREFGTKQWQSLRTKLATWKDNISSIITTIESNKVTEEGSQASSSSAAAIQGLSVR 417

[Close]

BLAST of MS003278 vs. TAIR 10
Match: AT5G15610.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 551.2 bits (1419), Expect = 7.0e-157
Identity = 277/442 (62.67%), Postives = 344/442 (77.83%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           MTT+V TSEEDP L +VRF S+LAWADAGPE AEP+V+RLC EA+E ++ G+W DLA+LM
Sbjct: 1   MTTIVPTSEEDPYLAIVRFTSQLAWADAGPEVAEPEVSRLCKEAEESIINGKWLDLATLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           +TSADL+ +K+SEKDLEC +T+ICNLV  A SP+E LEM K I+AK++QQP DK +LRLK
Sbjct: 61  VTSADLVSAKISEKDLECTYTIICNLVKNANSPEEVLEMVKAIAAKVIQQPNDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNL+++P +RF VYMKAL+LA+ GK  EYI+PS KKI+SFL+EWN+ I +QRELF
Sbjct: 121 ILFNLYNLVDHPNARFQVYMKALELAVNGKVTEYIVPSFKKIDSFLKEWNIDIKDQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAIA VL+E+KS A +  +F+T YLATFS ED  +LSEAKEEA RA++EFVKAP++F+CD
Sbjct: 181 LAIAKVLRENKSFAKESLQFVTNYLATFSNEDTQVLSEAKEEAVRAVIEFVKAPSIFQCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLD PAV QLEKD   + VYQLLKIFLTQRLDAY+EF  ANS  L++YGLV EDC+AKMR
Sbjct: 241 LLDHPAVAQLEKDPNNAPVYQLLKIFLTQRLDAYMEFQNANSGFLQTYGLVEEDCVAKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIV--- 360
           LLSLVDL S+DS +IPYA IK+ L++ND+EVELWVVKAIT+KL+ CKMDQMN+VVIV   
Sbjct: 301 LLSLVDLASDDSGKIPYASIKNTLQVNDEEVELWVVKAITAKLVACKMDQMNQVVIVRQV 360

Query: 361 --------------------------SRSTERVFGQQQWETLRTRLATWRGNIANVIGTI 411
                                     SR  ER FGQ+QW++LRT+LA WR N+ NVI TI
Sbjct: 361 SNLLLFRFICVNPKSHILVLHICSCISRCAEREFGQKQWQSLRTKLAAWRDNVRNVISTI 420

[Close]

BLAST of MS003278 vs. TAIR 10
Match: AT3G02200.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 497.3 bits (1279), Expect = 1.2e-140
Identity = 242/357 (67.79%), Postives = 304/357 (85.15%), Query Frame = 0


Query: 1   MTTVVQTSEEDPALTVVRFASELAWADAGPEAAEPQVNRLCNEAQECMVMGRWFDLASLM 60
           MTT+V TSEE+P L VVRF S+LAWADAGPEAAEP++ RLC EA+E MV  +W +L+SLM
Sbjct: 1   MTTIVPTSEENPFLAVVRFTSQLAWADAGPEAAEPEITRLCREAEESMVAEKWLELSSLM 60

Query: 61  LTSADLIFSKVSEKDLECVFTVICNLVTKAGSPDESLEMAKLISAKIVQQPTDKPALRLK 120
           +TSA+L+ SK+SEKDLEC +T+IC++V  A SP++ LEM K I++K+ QQP+DK +LRLK
Sbjct: 61  VTSAELVSSKISEKDLECTYTIICSIVKNAKSPEQVLEMVKAIASKVAQQPSDKASLRLK 120

Query: 121 ILFNLYNLLENPYSRFHVYMKALDLALKGKAPEYIIPSLKKIESFLREWNVGIIEQRELF 180
           ILFNLYNL+++PY+RF VYMKAL LA+ GK  EYI+ S KKI++FL+EWN+ I +QRELF
Sbjct: 121 ILFNLYNLVDHPYARFQVYMKALTLAVDGKVTEYIVSSFKKIDNFLKEWNIDIKDQRELF 180

Query: 181 LAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEAKEEAARAIVEFVKAPNMFRCD 240
           LAIA+VLKE+KS  N+  KFLTKYLATFS EDA +L EAKEEA RA++EFVKA ++F+CD
Sbjct: 181 LAIANVLKENKSLVNESLKFLTKYLATFSNEDAQVLDEAKEEAVRAVIEFVKASSIFQCD 240

Query: 241 LLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEFHAANSTLLKSYGLVHEDCIAKMR 300
           LLD+PAV QLEKDAKY+ VYQLLKIFLTQRL+AY EF  ANS  L+SYGL +EDC+ KMR
Sbjct: 241 LLDLPAVAQLEKDAKYAPVYQLLKIFLTQRLNAYTEFQNANSGFLQSYGLSNEDCVTKMR 300

Query: 301 LLSLVDLGSNDSARIPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQMNEVVIV 358
           LLSLVDL S++S +IPY  IKD L++N+ +VELW+VKAIT+KLI+CKMDQMN+V+IV
Sbjct: 301 LLSLVDLASDESGKIPYTSIKDTLQVNEQDVELWIVKAITAKLIECKMDQMNQVLIV 357

[Close]

BLAST of MS003278 vs. TAIR 10
Match: AT5G45620.1 (Proteasome component (PCI) domain protein )

HSP 1 Score: 52.4 bits (124), Expect = 1.0e-06
Identity = 55/223 (24.66%), Postives = 109/223 (48.88%), Query Frame = 0


Query: 180 FLAIASVLKESKSSANDYFKFLTKYLATFSGEDAYILSEA--KEEAARAIVEFVKAPNMF 239
           F  ++S   + +   +D++K    YLA  S ED   LSE+   + A    +  +   N++
Sbjct: 160 FYWVSSQYHKCRQEFSDFYKSALLYLAYTSVED---LSESFKLDLAFDLSLSALLGENIY 219

Query: 240 RC-DLLDMPAVGQLEKDAKYSLVYQLLKIFLTQRLDAYLEF-HAANSTLLKSYGLVHED- 299
              +LL  P +  L        +Y +L+ F    L  Y E     N++L+    LV  + 
Sbjct: 220 NFGELLAHPILKSL-LGTNVEWLYHILQAFNHGDLVQYQELCRVHNASLIAQPALVENEK 279

Query: 300 -CIAKMRLLSLVDLGSNDSAR---IPYALIKDALRINDDEVELWVVKAITSKLIDCKMDQ 359
             + K+ +L L+++  +  A    IP ++I +  +++ ++VE  ++K+++  LI+  +DQ
Sbjct: 280 KLLEKINILCLIEIIFSRPAEDRTIPLSIIAERTKLSIEDVEHLLMKSLSVHLIEGIIDQ 339

Query: 360 MNEVVIVSRSTERVFGQQQWETLRTRLATWRGNIANVIGTIRA 394
           +N  + VS +  RV G  Q + LR +L +W   +   + ++ A
Sbjct: 340 VNGTIYVSWAQPRVLGIPQIKALRDQLDSWVDKVHTTLLSVEA 378

The following BLAST results are available for this feature:

BLAST of MS003278 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134057.1	3.3e-225	99.51	eukaryotic translation initiation factor 3 subunit M-like [Momordica charantia]	[more]
TYK00620.1	2.5e-209	91.71	eukaryotic translation initiation factor 3 subunit M [Cucumis melo var. makuwa]	[more]
XP_008459389.1	9.6e-209	91.46	PREDICTED: eukaryotic translation initiation factor 3 subunit M [Cucumis melo]	[more]
XP_011656013.1	2.1e-208	91.22	eukaryotic translation initiation factor 3 subunit M [Cucumis sativus] >KGN52516...	[more]
XP_038889188.1	4.8e-208	91.24	eukaryotic translation initiation factor 3 subunit M-like [Benincasa hispida]	[more]

BLAST of MS003278 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q54KZ8	2.6e-55	35.55	Eukaryotic translation initiation factor 3 subunit M OS=Dictyostelium discoideum...	[more]
Q5ZJ64	7.0e-37	32.09	Eukaryotic translation initiation factor 3 subunit M OS=Gallus gallus OX=9031 GN...	[more]
Q5R8C4	7.8e-36	30.88	Eukaryotic translation initiation factor 3 subunit M OS=Pongo abelii OX=9601 GN=...	[more]
Q7L2H7	1.0e-35	30.88	Eukaryotic translation initiation factor 3 subunit M OS=Homo sapiens OX=9606 GN=...	[more]
Q99JX4	5.0e-35	30.59	Eukaryotic translation initiation factor 3 subunit M OS=Mus musculus OX=10090 GN...	[more]

BLAST of MS003278 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYH7	1.6e-225	99.51	Eukaryotic translation initiation factor 3 subunit M OS=Momordica charantia OX=3...	[more]
A0A5D3BNN4	1.2e-209	91.71	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]
A0A1S3CA60	4.7e-209	91.46	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo OX=3656 GN=...	[more]
A0A0A0KXL1	1.0e-208	91.22	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis sativus OX=3659 ...	[more]
A0A5A7TCS8	2.4e-205	86.24	Eukaryotic translation initiation factor 3 subunit M OS=Cucumis melo var. makuwa...	[more]

BLAST of MS003278 vs. TAIR 10


Match Name	E-value	Identity	Description
AT5G15610.2	1.6e-161	67.07	Proteasome component (PCI) domain protein	[more]
AT3G02200.2	4.4e-159	65.23	Proteasome component (PCI) domain protein	[more]
AT5G15610.1	7.0e-157	62.67	Proteasome component (PCI) domain protein	[more]
AT3G02200.1	1.2e-140	67.79	Proteasome component (PCI) domain protein	[more]
AT5G45620.1	1.0e-06	24.66	Proteasome component (PCI) domain protein	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR000717	Proteasome component (PCI) domain	SMART	SM00088	PINT_4	coord: 290..380 e-value: 1.8E-13 score: 60.7
IPR000717	Proteasome component (PCI) domain	PFAM	PF01399	PCI	coord: 260..359 e-value: 2.4E-12 score: 47.3
IPR000717	Proteasome component (PCI) domain	PROSITE	PS50250	PCI	coord: 196..362 score: 16.228157
None	No IPR available	SMART	SM00753	PINT	coord: 290..380 e-value: 1.8E-13 score: 60.7
None	No IPR available	PANTHER	PTHR15350:SF14	EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT M	coord: 1..405
None	No IPR available	PANTHER	PTHR15350	COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA17	coord: 1..405
IPR040750	eIF3 subunit M, C-terminal helix domain	PFAM	PF18005	eIF3m_C_helix	coord: 363..391 e-value: 1.5E-13 score: 50.1
IPR027528	Eukaryotic translation initiation factor 3 subunit M	HAMAP	MF_03012	eIF3m	coord: 15..397 score: 22.349064
IPR036390	Winged helix DNA-binding domain superfamily	SUPERFAMILY	46785	"Winged helix" DNA-binding domain	coord: 314..362

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003278.1	MS003278.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
cellular_component	GO:0005737	cytoplasm
cellular_component	GO:0005852	eukaryotic translation initiation factor 3 complex
molecular_function	GO:0003743	translation initiation factor activity