![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS003266 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGACGGCAAAGACTGTGAAAGACGTCTCTCCTCACGAGTTCGTCAAGGCCTATGCGGCTCATCTTAAGAGATCTGGAAAGGTATTCATTTTATATTTCTACTTGCCCTTTGCTGATTCTCTCAATGTGGATTGATTTTCAGAATGGGGTCAAGGCTGGGCTCGTTTTCTGTTTAGTTGGCCATGTTATTCGGCTTCTGCTGGCTAGTTTTCAGGTTTTAGAGTTTCGGTTGATTTTTTTTTGTGTTTTTTCGAACTTTTAATGTGCTTCTGAGTTGTAAGGTTCATTTGCTAATTCTTCTGGAGAGGTTAATCGTTTAATTAGCTTTGAAAGCACGCTCGCTTTGAATATGCCTGTTCCGGTATTCACTACTTTCTATTGCTGTTTCTGGCCGTTGCACTTGTGATGAGAAATTGCGAAATATTTTTATTTTCTTGCATTTACACTTAGCCCTTGAGCGTTTTTGGGATCTTGTTAATTTTGTGGACATGTTCTCGATCTAAAGGATTCTGTATTTTTTATATATTTCTAACTTTTTTTTTTCATCCCCCTAGTTTGGGTTATCTCTTTTGTTATTCGATTCCTATGAATACGATTTTAGTACACGTTCTGTTCTTGATTTGTTATGACTTTCTACATCACGTGTTCTTGTCCACTTATAAATTGACTATGATCATTTTTCGCCTGTATTGTTGCCGAGCAGGTTGAACTTCCACCATGGACAGACATAGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGATTGGTATTATGTCAGAGCTGGTCAGTCTCCCCTTTTCCTCCATTTGGCTTCCATACTTTCACTTGTTATAAAATCTACATAAATAAATTGCTGCTGTGTTATGTATGTACTATTTACTGATCTCATAGTCTTATGATCACCATTTCAAACTTATTCAGCATCCATGGCTAGGAAGATCTATTTGAGGGGAGGTCTCGGTGTGGGGGCATTTAAGCGGATTTATGGTGGAAGCCAGAGGAATGGAAGTCGCCCTCCACACTTCTGCAAAAGCAGTGGTGCTATTGCTCGTCATATTCTACAACAGTTGCAGGAAATGAACATTGTTGATGTTGATCCCAAGGGGTGAGTTCAAAATCCTCATAGATTTCTTTTAGCTCTTCGATCTGATGTTCCAAGTAAAATGACAATCGATTGTATTGGATATAACCCTGCTTCGCTTTTTGGACTGGTCTCAAATCATCTGAACCAGAGTTATAATTTAGTCCTACATGGTTAATGTCGATTAATGTATATTTCTCTTTGGATGTGTTTGCAGTGGAAGAAGAATCACCTCAAGCGGACGACGGGATCTCGATCAAGTTGCTGGCCGCATTGTTGTTGCCCCT ATGGCGACGGCAAAGACTGTGAAAGACGTCTCTCCTCACGAGTTCGTCAAGGCCTATGCGGCTCATCTTAAGAGATCTGGAAAGGTTGAACTTCCACCATGGACAGACATAGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGATTGGTATTATGTCAGAGCTGCATCCATGGCTAGGAAGATCTATTTGAGGGGAGGTCTCGGTGTGGGGGCATTTAAGCGGATTTATGGTGGAAGCCAGAGGAATGGAAGTCGCCCTCCACACTTCTGCAAAAGCAGTGGTGCTATTGCTCGTCATATTCTACAACAGTTGCAGGAAATGAACATTGTTGATGTTGATCCCAAGGGTGGAAGAAGAATCACCTCAAGCGGACGACGGGATCTCGATCAAGTTGCTGGCCGCATTGTTGTTGCCCCT ATGGCGACGGCAAAGACTGTGAAAGACGTCTCTCCTCACGAGTTCGTCAAGGCCTATGCGGCTCATCTTAAGAGATCTGGAAAGGTTGAACTTCCACCATGGACAGACATAGTTAAGACTGCAAGATTCAAAGAGCTTGCTCCTTATGACCCTGATTGGTATTATGTCAGAGCTGCATCCATGGCTAGGAAGATCTATTTGAGGGGAGGTCTCGGTGTGGGGGCATTTAAGCGGATTTATGGTGGAAGCCAGAGGAATGGAAGTCGCCCTCCACACTTCTGCAAAAGCAGTGGTGCTATTGCTCGTCATATTCTACAACAGTTGCAGGAAATGAACATTGTTGATGTTGATCCCAAGGGTGGAAGAAGAATCACCTCAAGCGGACGACGGGATCTCGATCAAGTTGCTGGCCGCATTGTTGTTGCCCCT MATAKTVKDVSPHEFVKAYAAHLKRSGKVELPPWTDIVKTARFKELAPYDPDWYYVRAASMARKIYLRGGLGVGAFKRIYGGSQRNGSRPPHFCKSSGAIARHILQQLQEMNIVDVDPKGGRRITSSGRRDLDQVAGRIVVAP Homology
BLAST of MS003266 vs. NCBI nr
Match: XP_022150295.1 (40S ribosomal protein S19-3-like [Momordica charantia]) HSP 1 Score: 292.4 bits (747), Expect = 2.2e-75 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of MS003266 vs. NCBI nr
Match: XP_022923365.1 (40S ribosomal protein S19-3-like [Cucurbita moschata] >XP_022991009.1 40S ribosomal protein S19-3-like [Cucurbita maxima] >XP_023513208.1 40S ribosomal protein S19-3-like [Cucurbita pepo subsp. pepo] >KAG6602529.1 40S ribosomal protein S19-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033203.1 40S ribosomal protein S19-3, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 291.2 bits (744), Expect = 4.9e-75 Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS003266 vs. NCBI nr
Match: XP_022134553.1 (40S ribosomal protein S19-3 [Momordica charantia]) HSP 1 Score: 291.2 bits (744), Expect = 4.9e-75 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of MS003266 vs. NCBI nr
Match: KAG6593129.1 (Pentatricopeptide repeat-containing protein, mitochondrial, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74 Identity = 140/143 (97.90%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS003266 vs. NCBI nr
Match: XP_022954406.1 (40S ribosomal protein S19-3-like [Cucurbita moschata] >XP_022960517.1 40S ribosomal protein S19-3-like [Cucurbita moschata] >XP_022992561.1 40S ribosomal protein S19-3-like [Cucurbita maxima] >XP_023004681.1 40S ribosomal protein S19-3-like [Cucurbita maxima] >XP_023547478.1 40S ribosomal protein S19-3-like [Cucurbita pepo subsp. pepo] >KAG6575902.1 40S ribosomal protein S19-3, partial [Cucurbita argyrosperma subsp. sororia] >KAG7014435.1 40S ribosomal protein S19-3 [Cucurbita argyrosperma subsp. argyrosperma] >KAG7027262.1 40S ribosomal protein S19-3 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 290.0 bits (741), Expect = 1.1e-74 Identity = 140/143 (97.90%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS003266 vs. ExPASy Swiss-Prot
Match: Q9FNP8 (40S ribosomal protein S19-3 OS=Arabidopsis thaliana OX=3702 GN=RPS19C PE=2 SV=1) HSP 1 Score: 263.1 bits (671), Expect = 1.9e-69 Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of MS003266 vs. ExPASy Swiss-Prot
Match: Q9SGA6 (40S ribosomal protein S19-1 OS=Arabidopsis thaliana OX=3702 GN=RPS19A PE=2 SV=1) HSP 1 Score: 262.7 bits (670), Expect = 2.4e-69 Identity = 122/143 (85.31%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of MS003266 vs. ExPASy Swiss-Prot
Match: Q9LF30 (40S ribosomal protein S19-2 OS=Arabidopsis thaliana OX=3702 GN=RPS19B PE=2 SV=1) HSP 1 Score: 257.7 bits (657), Expect = 7.8e-68 Identity = 121/139 (87.05%), Postives = 132/139 (94.96%), Query Frame = 0
BLAST of MS003266 vs. ExPASy Swiss-Prot
Match: P40978 (40S ribosomal protein S19 OS=Oryza sativa subsp. japonica OX=39947 GN=RPS19A PE=2 SV=1) HSP 1 Score: 246.9 bits (629), Expect = 1.4e-64 Identity = 115/140 (82.14%), Postives = 129/140 (92.14%), Query Frame = 0
BLAST of MS003266 vs. ExPASy Swiss-Prot
Match: Q94613 (40S ribosomal protein S19 OS=Mya arenaria OX=6604 GN=RPS19 PE=2 SV=1) HSP 1 Score: 185.7 bits (470), Expect = 3.8e-46 Identity = 78/134 (58.21%), Postives = 110/134 (82.09%), Query Frame = 0
BLAST of MS003266 vs. ExPASy TrEMBL
Match: A0A6J1D839 (40S ribosomal protein S19-3-like OS=Momordica charantia OX=3673 GN=LOC111018495 PE=3 SV=1) HSP 1 Score: 292.4 bits (747), Expect = 1.1e-75 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of MS003266 vs. ExPASy TrEMBL
Match: A0A6J1JTL0 (40S ribosomal protein S19-3-like OS=Cucurbita maxima OX=3661 GN=LOC111487728 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75 Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS003266 vs. ExPASy TrEMBL
Match: A0A6J1C2B0 (40S ribosomal protein S19-3 OS=Momordica charantia OX=3673 GN=LOC111006771 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75 Identity = 142/143 (99.30%), Postives = 142/143 (99.30%), Query Frame = 0
BLAST of MS003266 vs. ExPASy TrEMBL
Match: A0A6J1EBL3 (40S ribosomal protein S19-3-like OS=Cucurbita moschata OX=3662 GN=LOC111431083 PE=3 SV=1) HSP 1 Score: 291.2 bits (744), Expect = 2.4e-75 Identity = 141/143 (98.60%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS003266 vs. ExPASy TrEMBL
Match: A0A6J1JTW8 (40S ribosomal protein S19-3-like OS=Cucurbita maxima OX=3661 GN=LOC111488847 PE=3 SV=1) HSP 1 Score: 290.0 bits (741), Expect = 5.3e-75 Identity = 140/143 (97.90%), Postives = 143/143 (100.00%), Query Frame = 0
BLAST of MS003266 vs. TAIR 10
Match: AT5G61170.1 (Ribosomal protein S19e family protein ) HSP 1 Score: 263.1 bits (671), Expect = 1.3e-70 Identity = 123/142 (86.62%), Postives = 133/142 (93.66%), Query Frame = 0
BLAST of MS003266 vs. TAIR 10
Match: AT3G02080.1 (Ribosomal protein S19e family protein ) HSP 1 Score: 262.7 bits (670), Expect = 1.7e-70 Identity = 122/143 (85.31%), Postives = 134/143 (93.71%), Query Frame = 0
BLAST of MS003266 vs. TAIR 10
Match: AT5G15520.1 (Ribosomal protein S19e family protein ) HSP 1 Score: 257.7 bits (657), Expect = 5.6e-69 Identity = 121/139 (87.05%), Postives = 132/139 (94.96%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|