![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS003261 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTGGAGTGGGAGATCAATTAGAGATCAAGTTTCGATTGAACGATGGATCTGATATCGGTCCTAAAACCTTCCCGGCTGCCACAAGCATCGCAACCTTGAAAGAAAGCATTCTTGCACAATGGCCAAGAGGTGTGTGAAATTTAAACATCTTTCTCATGGTTTGGGCCTTTGGGGGTGTTTGATTTTATTTGAATTCCTATGCTTGAGCTGATCTTGTAGCTCTGTTCGTAATTGAAGTATTAAGTTTTAACATTTTCAGCATATTGGCATCTATTTCGTCATTTACTCAAAATCGGAGAATTTCTTAAGACGAAACATAACACAAGCAAAGCTCAGATCTGATGTAGAGCTCTGCATTTTCTTCATTCTTGCTGTCGCCAATTCAGAAGATACACCACGGAAAAACACCTAACAATCTGTTACCGGAAGTACATCGGTCCATAAAACCTCATGATATTTGTTACATGTTGGATCTTTAATAACCATTTTGATTGAAGTTAGTGACTGGATTTTATGGCTCTTCAAAAGAAAATTCTATCAAGGAATGTCTGATACTCTGTCTGAGTTCTTAACAGAAGAATGCTCTTTGTTTCCGTTTACTGTGGATCTTCTGACTTATTTTCTTCTTCATTTTAACTCAAGTTGCAACATGTTTCTGACATCATTCATTCCCAAATTATGTACAGTGGAAATTTGTGGATGTGAACTGGATTGTGGGAGCCTTTCTAGCCCTTCACGCTTCTCGACACCTGCATTCCTTTGATTGCTTGTTTTACTCCTGCCATATTCTTTTGTTTATGCATCCTGGTCCTTGAGCGACTAGCTGTCTTGTTTTCTATTGCTTGAATCCATGATTGAACTATATCTCAAAAAGTCTTCTGTTTCTACTTAGCTTTTTAGTTCTGAAATCGAGTAGGCTCAGTTCAGTTAATATCCATAAAGAACATAGTTTCTTGCTGCTCTGCTTTGCTCACTTCAAAGTCATGGGTTCCTTTTTATAGATCTTTCCTGAGGCAGTAATCTTGTAATATCATTCATTACACACAAAGCAATTTTCAGTAGGATTTAGTGTCATTCGCATTGGTTTATCTGACATATATTGACCATATTGTATATTAATGAGAATTTCAGTGTTAGGCAATGGCAAGAAGGATGTTATTTCTGTTGCATTAGCGCTGGGGCTAGATCTTAATATGCCCTTCTTTACTTTGTTACCGTAATATTGTGAATGTAAGTTTCTTTTGATCAACCATATGATTATTTGTTTGAGCAGAAAAGGAGAATGGTCCAAGAACAGTTAAGGACGTCAAGTTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACACTTAATGATTGCAGAAGCCCATTATATGACATTCCTGGAAGTGTGACAACCATGCATGTTGTAATCCAACCACCAAGTTTGGAGAAAGGTATAATTTGTTCTATAAAAAGC ATGGCTGGAGTGGGAGATCAATTAGAGATCAAGTTTCGATTGAACGATGGATCTGATATCGGTCCTAAAACCTTCCCGGCTGCCACAAGCATCGCAACCTTGAAAGAAAGCATTCTTGCACAATGGCCAAGAGCAGAAAAGGAGAATGGTCCAAGAACAGTTAAGGACGTCAAGTTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACACTTAATGATTGCAGAAGCCCATTATATGACATTCCTGGAAGTGTGACAACCATGCATGTTGTAATCCAACCACCAAGTTTGGAGAAAGGTATAATTTGTTCTATAAAAAGC ATGGCTGGAGTGGGAGATCAATTAGAGATCAAGTTTCGATTGAACGATGGATCTGATATCGGTCCTAAAACCTTCCCGGCTGCCACAAGCATCGCAACCTTGAAAGAAAGCATTCTTGCACAATGGCCAAGAGCAGAAAAGGAGAATGGTCCAAGAACAGTTAAGGACGTCAAGTTAATAAGTGCAGGAAAAATCTTAGAGAATAACAGAACACTTAATGATTGCAGAAGCCCATTATATGACATTCCTGGAAGTGTGACAACCATGCATGTTGTAATCCAACCACCAAGTTTGGAGAAAGGTATAATTTGTTCTATAAAAAGC MAGVGDQLEIKFRLNDGSDIGPKTFPAATSIATLKESILAQWPRAEKENGPRTVKDVKLISAGKILENNRTLNDCRSPLYDIPGSVTTMHVVIQPPSLEKGIICSIKS Homology
BLAST of MS003261 vs. NCBI nr
Match: XP_038889784.1 (membrane-anchored ubiquitin-fold protein 2-like [Benincasa hispida] >XP_038889785.1 membrane-anchored ubiquitin-fold protein 2-like [Benincasa hispida] >XP_038889786.1 membrane-anchored ubiquitin-fold protein 2-like [Benincasa hispida] >XP_038889787.1 membrane-anchored ubiquitin-fold protein 2-like [Benincasa hispida]) HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. NCBI nr
Match: XP_022134039.1 (membrane-anchored ubiquitin-fold protein 2-like [Momordica charantia] >XP_022134040.1 membrane-anchored ubiquitin-fold protein 2-like [Momordica charantia] >XP_022134041.1 membrane-anchored ubiquitin-fold protein 2-like [Momordica charantia] >XP_022134042.1 membrane-anchored ubiquitin-fold protein 2-like [Momordica charantia] >XP_022134043.1 membrane-anchored ubiquitin-fold protein 2-like [Momordica charantia]) HSP 1 Score: 199.1 bits (505), Expect = 1.9e-47 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. NCBI nr
Match: XP_008459370.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 2-like isoform X2 [Cucumis melo] >XP_008459372.1 PREDICTED: membrane-anchored ubiquitin-fold protein 2-like isoform X2 [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. NCBI nr
Match: XP_008459365.1 (PREDICTED: membrane-anchored ubiquitin-fold protein 1-like isoform X1 [Cucumis melo] >XP_008459366.1 PREDICTED: membrane-anchored ubiquitin-fold protein 1-like isoform X1 [Cucumis melo] >XP_008459367.1 PREDICTED: membrane-anchored ubiquitin-fold protein 1-like isoform X1 [Cucumis melo] >XP_008459368.1 PREDICTED: membrane-anchored ubiquitin-fold protein 1-like isoform X1 [Cucumis melo]) HSP 1 Score: 198.0 bits (502), Expect = 4.2e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. NCBI nr
Match: XP_004141460.1 (membrane-anchored ubiquitin-fold protein 2 [Cucumis sativus] >XP_011656006.1 membrane-anchored ubiquitin-fold protein 2 [Cucumis sativus] >XP_031741332.1 membrane-anchored ubiquitin-fold protein 2 [Cucumis sativus] >XP_031741333.1 membrane-anchored ubiquitin-fold protein 2 [Cucumis sativus] >KGN52499.1 hypothetical protein Csa_008602 [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 5.5e-47 Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy Swiss-Prot
Match: Q8LCS8 (Membrane-anchored ubiquitin-fold protein 2 OS=Arabidopsis thaliana OX=3702 GN=MUB2 PE=1 SV=1) HSP 1 Score: 152.1 bits (383), Expect = 3.5e-36 Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy Swiss-Prot
Match: Q9MAB9 (Membrane-anchored ubiquitin-fold protein 1 OS=Arabidopsis thaliana OX=3702 GN=MUB1 PE=1 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 3.6e-33 Identity = 66/100 (66.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy Swiss-Prot
Match: Q75GT2 (Membrane-anchored ubiquitin-fold protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB1 PE=3 SV=1) HSP 1 Score: 136.7 bits (343), Expect = 1.5e-31 Identity = 64/98 (65.31%), Postives = 85/98 (86.73%), Query Frame = 0
BLAST of MS003261 vs. ExPASy Swiss-Prot
Match: Q8GWJ6 (Membrane-anchored ubiquitin-fold protein 6 OS=Arabidopsis thaliana OX=3702 GN=MUB6 PE=1 SV=1) HSP 1 Score: 120.6 bits (301), Expect = 1.1e-26 Identity = 53/100 (53.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy Swiss-Prot
Match: Q6Z8K4 (Membrane-anchored ubiquitin-fold protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=MUB3 PE=3 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 3.3e-26 Identity = 55/100 (55.00%), Postives = 78/100 (78.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy TrEMBL
Match: A0A6J1BXN4 (Membrane-anchored ubiquitin-fold protein OS=Momordica charantia OX=3673 GN=LOC111006411 PE=4 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 9.2e-48 Identity = 99/100 (99.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy TrEMBL
Match: A0A1S3CA36 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103498522 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy TrEMBL
Match: A0A1S3CB88 (Membrane-anchored ubiquitin-fold protein OS=Cucumis melo OX=3656 GN=LOC103498522 PE=4 SV=1) HSP 1 Score: 198.0 bits (502), Expect = 2.1e-47 Identity = 98/100 (98.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy TrEMBL
Match: A0A0A0KUE8 (Membrane-anchored ubiquitin-fold protein OS=Cucumis sativus OX=3659 GN=Csa_5G638380 PE=4 SV=1) HSP 1 Score: 197.6 bits (501), Expect = 2.7e-47 Identity = 97/100 (97.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. ExPASy TrEMBL
Match: A0A6J1JTE0 (Membrane-anchored ubiquitin-fold protein OS=Cucurbita maxima OX=3661 GN=LOC111487674 PE=4 SV=1) HSP 1 Score: 196.8 bits (499), Expect = 4.6e-47 Identity = 96/100 (96.00%), Postives = 99/100 (99.00%), Query Frame = 0
BLAST of MS003261 vs. TAIR 10
Match: AT5G15460.1 (membrane-anchored ubiquitin-fold protein 2 ) HSP 1 Score: 152.1 bits (383), Expect = 2.5e-37 Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of MS003261 vs. TAIR 10
Match: AT5G15460.2 (membrane-anchored ubiquitin-fold protein 2 ) HSP 1 Score: 152.1 bits (383), Expect = 2.5e-37 Identity = 73/100 (73.00%), Postives = 87/100 (87.00%), Query Frame = 0
BLAST of MS003261 vs. TAIR 10
Match: AT3G01050.1 (membrane-anchored ubiquitin-fold protein 1 precursor ) HSP 1 Score: 142.1 bits (357), Expect = 2.6e-34 Identity = 66/100 (66.00%), Postives = 86/100 (86.00%), Query Frame = 0
BLAST of MS003261 vs. TAIR 10
Match: AT1G22050.1 (membrane-anchored ubiquitin-fold protein 6 precursor ) HSP 1 Score: 120.6 bits (301), Expect = 8.0e-28 Identity = 53/100 (53.00%), Postives = 80/100 (80.00%), Query Frame = 0
BLAST of MS003261 vs. TAIR 10
Match: AT1G77870.1 (membrane-anchored ubiquitin-fold protein 5 precursor ) HSP 1 Score: 114.4 bits (285), Expect = 5.7e-26 Identity = 54/100 (54.00%), Postives = 76/100 (76.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
|