![](http://cucurbitgenomics.org/sites/default/files/styles/slideshow/public/carousel/101322_web.jpg?itok=EG-G51x6)
MS003222 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.CTTCCTGTCGAACCGGCTTCTATTTCAATTTGTATTGGACCGATCGATATGTCAGTAATCAAGTTTTCAGTCGGCTGGTGGAATACATCGCATCGA CTTCCTGTCGAACCGGCTTCTATTTCAATTTGTATTGGACCGATCGATATGTCAGTAATCAAGTTTTCAGTCGGCTGGTGGAATACATCGCATCGA CTTCCTGTCGAACCGGCTTCTATTTCAATTTGTATTGGACCGATCGATATGTCAGTAATCAAGTTTTCAGTCGGCTGGTGGAATACATCGCATCGA LPVEPASISICIGPIDMSVIKFSVGWWNTSHR Homology
BLAST of MS003222 vs. NCBI nr
Match: YP_009153945.1 (cytochrome c biogenesis C [Gossypium hirsutum] >YP_009153978.1 cytochrome c biogenesis C [Gossypium harknessii] >YP_009177642.1 cytochrome c biogenesis C [Gossypium barbadense] >YP_009250142.1 cytochrome c biogenesis C [Gossypium raimondii] >YP_009388341.1 cytochrome c biogenesis C [Gossypium arboreum] >YP_009388380.1 cytochrome c biogenesis C [Gossypium thurberi] >YP_009388416.1 cytochrome c biogenesis C [Gossypium davidsonii] >YP_009388452.1 cytochrome c biogenesis C [Gossypium trilobum] >YP_009412587.1 cytochrome c biogenesis C [Hibiscus cannabinus] >XP_012482190.1 PREDICTED: putative cytochrome c biosynthesis ccmC-like mitochondrial protein [Gossypium raimondii] >AFO69212.1 cytochrome c biogenesis C [Gossypium hirsutum] >AGA54182.1 cytochrome c biogenesis C [Gossypium hirsutum] >AGA54216.1 cytochrome c biogenesis C [Gossypium harknessii] >AKQ51126.1 cytochrome c biogenesis C [Gossypium barbadense] >AMT85339.1 cytochrome c biogenesis C [Gossypium arboreum]) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. NCBI nr
Match: XP_039045445.1 (putative cytochrome c biosynthesis ccmC-like mitochondrial protein [Hibiscus syriacus]) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. NCBI nr
Match: KJB09786.1 (hypothetical protein B456_001G165900 [Gossypium raimondii]) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. NCBI nr
Match: AFV48375.1 (cytochrome c biogenesis C [Gossypium harknessii]) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. NCBI nr
Match: XP_011000534.1 (PREDICTED: putative cytochrome c biosynthesis ccmC-like mitochondrial protein [Populus euphratica]) HSP 1 Score: 62.0 bits (149), Expect = 1.1e-06 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. ExPASy Swiss-Prot
Match: P92527 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Arabidopsis thaliana OX=3702 GN=CCMC PE=2 SV=4) HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07 Identity = 22/32 (68.75%), Postives = 26/32 (81.25%), Query Frame = 0
BLAST of MS003222 vs. ExPASy Swiss-Prot
Match: P38453 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Marchantia polymorpha OX=3197 GN=CCMC PE=3 SV=1) HSP 1 Score: 44.7 bits (104), Expect = 2.3e-04 Identity = 18/27 (66.67%), Postives = 22/27 (81.48%), Query Frame = 0
BLAST of MS003222 vs. ExPASy TrEMBL
Match: S4SKY5 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Gossypium hirsutum OX=3635 GN=ccmC PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-07 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. ExPASy TrEMBL
Match: A0A165EI60 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Gossypium raimondii OX=29730 GN=ccmC PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-07 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. ExPASy TrEMBL
Match: A0A220T1I1 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Hibiscus cannabinus OX=229543 GN=ccmC PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-07 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. ExPASy TrEMBL
Match: A0A6P4N0Z2 (putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Gossypium arboreum OX=29729 GN=LOC108465634 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-07 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. ExPASy TrEMBL
Match: A0A1X9H786 (Putative cytochrome c biosynthesis ccmC-like mitochondrial protein OS=Gossypium arboreum OX=29729 GN=ccmC PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 5.2e-07 Identity = 25/32 (78.12%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003222 vs. TAIR 10
Match: AT2G07681.1 (Cytochrome C assembly protein ) HSP 1 Score: 55.8 bits (133), Expect = 7.2e-09 Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of MS003222 vs. TAIR 10
Match: AT2G07771.2 (Cytochrome C assembly protein ) HSP 1 Score: 55.8 bits (133), Expect = 7.2e-09 Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0
BLAST of MS003222 vs. TAIR 10
Match: ATMG00900.1 (cytochrome C biogenesis 256 ) HSP 1 Score: 55.8 bits (133), Expect = 7.2e-09 Identity = 24/32 (75.00%), Postives = 27/32 (84.38%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
|