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MS003214 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTCGCCGAAAAGGGGAAGAAATCGAAGGTGGCCGACAAAGTTGAGGACGACGAGGCTGATCACATTGACGTCGAGCTCGTCCAATTTATCGAGAAGTTACAGGAGGTTCAAGACGAGCTCGAGAAGGTCCCTTTTTCCTCCTCCTCCTCTCCTCTCTGTTTACTTTTCTGTTCCTACATGGATGAGAATAGGTTTCAGTTTCTGCATCATGCATTTTCCAGTTTTCAACTTCGCTGTAAATTCGCCTGTTCTGTACTTTAATTGCATTCCTGCGCTCTCTGAACTTGGAACAACATTCTTATTGATACATATGTTGTTTGCTCAGTCACTGTTTCTTACTTTAACTTCTCTTGCTTCTATAAGTGGTTCTTAGAAATCGATTCAAGCTGCGTTTTGGACTTCTAACGTATTTAACGTAATAGACATAAAGTTGATTTTTTCAAACTGTATTTGACCAAAGCTTGCATAGCATAGAAGCCAATGCCATAGCTTCTTCTGATTCTTCTTTGGAACTGCGGTGGTTAGGCATTTTGAGTTATACTCGTGTTAAATTGACGGCAATCTTGCTTTAATTATTTTGCCTCATATATGTTACCCTAAATCCCCTGAGCTGAAACTTAAGATCATGATTAATTTGAACAATTTAAATTCTTTCTTAACACTTCTTATCCAAAAGTTTGATAAATTATGTTAATTAAGGATGCTCAAAGAAATGGACAACTAATTTGTTTAAGATAGAAACTAAGATTTCTACAAGGATTTCAAGTTAAGAAGTGTCTTGGTTCAAATATTATGAATTCCTTGTATTTTATTGGCAAGGATTTGACACTGCAAAAATCACGAAGAATCAGGCTGAAGAAGTAAAATCTCATTCCATAATTGATCACTTTTTTATTTTTGCTTCTGATTTTTTGAAGGAAAGTCATAATTATATTACCATATTCACCATGTATATACTAATCTCAAAGGGATACAAGGACAAGTAGGTATCAATATTATTTTATTACCATTAAAATGCCACAATATTAACCTAAGTAGATGCTGTTTTGCCAACATGTAACCATGTCCCGAATTCTCTTGTTTTCCTGATGGTTATATTTTCCCTTTTTTTGCTTATGGATTTATAAAGTAGAATTCAGTTCTCTCAAACACCAATTATATCTCTTCTTCTTTGTTTCGTACTTTCCTAAATTGAGACGAAGCATGTAAATAATGAAAATAGTAAATCATACTGTCCAAAAAGAGAATAGGTCTAGATTTACTTTATTGTAATTAAATTTATAAGATTGAAAAAAATTAAAATTTGGATATTAACTCTAATAGGGGAGTGTTTTCTATAAGTTCATGCTAGAGAATTATATCTTGTATATAACCTTTCACTATATCAATGAAAAGTGTGTTTCATCTCCCAAAAAACTTGATACTTGGATGGAATAACTTCATTGAAGAGGACTGCCACTGAAATGCTTCTTTGACTGTTTGATATTACAATATTGAGTGGTACATATTTTTTTTTTGGCAAAGGAGTGGACATAATGTTTGCAATATCCAGATGTAGATTTCCCCTACTATCCCTTAGTGTCTTGTTGAGATTTTTGTTCTTTCCTTCATTTACTCTAATGAAAGTCATGTTTTCTTTCATTTTTTTATTCTCTCTATTTTAGTATTCTCTTCCTGCTTTCAACTTTGAAAGTAATCAGGTTGGTTATTGTGGATACTAGTAGATTGCACTTGTTAGGTAATATAGCTAGGTTTTTCTGTTTTGAAATTTTTCAATATTTTATGTAGAAAACTTCCATGTGTGTTGTTACTACTAATGATCAATATGGTTCCCAACTTATATAGAAGTTTATTCCAATTGAAGATTTAGTTGTCCAGCATTTTGTCAAAGAATTTGAAGATTTATATATGATTCAGTATTAGTATTTAATAGTTATACTTGTGTTTAGCCTTGTACCTTTGGTATTCAACAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCGGCCTGTTTATGTGAAACGGAATGAGATTATCAAAACTATTCCAGACTTCTGGTTAACTGCTGTTAGTGATCTGCATATTTCTTGACGTTTTAAATCTTATATTTGTGCTGCTAGTTACTTTATAGTTTATTTCCTTTTTGTTTTCTTTGATGCCATGACCAATGCTTGGTTTTTTGCAGTTCTTGAGTCATCCTGCACTTTGCGATCTTTTGTCAGAAGAAGATCAGAAGGTTTTTATTGCTTTTATCTTTTTGATTCTAATTACGCCTGTGATTAAAAAAATAGATATTTCTACAATTTTTTTGTACTTCAATTTATTTCGAAGTCCTATCTCAAAGAGACTTTTTATTATTTAACAATCAACTGGAAAGTATGTACTATTGTAATTGTTGATCTCTTATTCTTGGCGTAGATCTTTAGGCATTTAGCTTCTCTTGAAGTGGAGGATCAAAAGGATGTAAAGATGGGCTACTCCATCATATTTGTAAGCTTCAGCTAACTTGTTTGACTTATACTGTTATCTGTCTATTCAAATCATTTGTATGTTACTTTACTTTATTTTGGCCTATTTGATATCTTCGCACAAGTGCAGAATGTGATATTGACCTGTCACTTAACTTCTTTAAATTTCAGAATTTCAATGAGAATCCTCATTTTGAAGATAGAAGGCTTGAGAAGACATATACATTCTTTGAAGATGGGGCAATTAAAATTACTGGAACAACAATCAAGTGGAAGGATGGCTCGGTAACAGTTATTTCTATCAAAATAATAGTTCATTTGTTTTTTTTAAATCATATCTAACAACTAATGGTAATTTTTGAAGGGCACATCAAATGGAGTTAATGGTGAGAAGAAAGGGAAGAAGCGACCCCTGGCTGAAGACAGGTGCTTCCATACC ATGGTCGCCGAAAAGGGGAAGAAATCGAAGGTGGCCGACAAAGTTGAGGACGACGAGGCTGATCACATTGACGTCGAGCTCGTCCAATTTATCGAGAAGTTACAGGAGGTTCAAGACGAGCTCGAGAAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCGGCCTGTTTATGTGAAACGGAATGAGATTATCAAAACTATTCCAGACTTCTGGTTAACTGCTTTCTTGAGTCATCCTGCACTTTGCGATCTTTTGTCAGAAGAAGATCAGAAGATCTTTAGGCATTTAGCTTCTCTTGAAGTGGAGGATCAAAAGGATGTAAAGATGGGCTACTCCATCATATTTAATTTCAATGAGAATCCTCATTTTGAAGATAGAAGGCTTGAGAAGACATATACATTCTTTGAAGATGGGGCAATTAAAATTACTGGAACAACAATCAAGTGGAAGGATGGCTCGGGCACATCAAATGGAGTTAATGGTGAGAAGAAAGGGAAGAAGCGACCCCTGGCTGAAGACAGGTGCTTCCATACC ATGGTCGCCGAAAAGGGGAAGAAATCGAAGGTGGCCGACAAAGTTGAGGACGACGAGGCTGATCACATTGACGTCGAGCTCGTCCAATTTATCGAGAAGTTACAGGAGGTTCAAGACGAGCTCGAGAAGGTTAATGAAGAAGCAGGTGACAAAGTTTTGGAAGTTGAACAGAAATATAATGAGATAAGGCGGCCTGTTTATGTGAAACGGAATGAGATTATCAAAACTATTCCAGACTTCTGGTTAACTGCTTTCTTGAGTCATCCTGCACTTTGCGATCTTTTGTCAGAAGAAGATCAGAAGATCTTTAGGCATTTAGCTTCTCTTGAAGTGGAGGATCAAAAGGATGTAAAGATGGGCTACTCCATCATATTTAATTTCAATGAGAATCCTCATTTTGAAGATAGAAGGCTTGAGAAGACATATACATTCTTTGAAGATGGGGCAATTAAAATTACTGGAACAACAATCAAGTGGAAGGATGGCTCGGGCACATCAAATGGAGTTAATGGTGAGAAGAAAGGGAAGAAGCGACCCCTGGCTGAAGACAGGTGCTTCCATACC MVAEKGKKSKVADKVEDDEADHIDVELVQFIEKLQEVQDELEKVNEEAGDKVLEVEQKYNEIRRPVYVKRNEIIKTIPDFWLTAFLSHPALCDLLSEEDQKIFRHLASLEVEDQKDVKMGYSIIFNFNENPHFEDRRLEKTYTFFEDGAIKITGTTIKWKDGSGTSNGVNGEKKGKKRPLAEDRCFHT Homology
BLAST of MS003214 vs. NCBI nr
Match: XP_022134471.1 (NAP1-related protein 2-like [Momordica charantia]) HSP 1 Score: 360.9 bits (925), Expect = 6.6e-96 Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0
BLAST of MS003214 vs. NCBI nr
Match: XP_022938966.1 (NAP1-related protein 2-like [Cucurbita moschata] >XP_022993662.1 NAP1-related protein 2-like [Cucurbita maxima] >KAG6578589.1 NAP1-related protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 341.7 bits (875), Expect = 4.1e-90 Identity = 173/186 (93.01%), Postives = 177/186 (95.16%), Query Frame = 0
BLAST of MS003214 vs. NCBI nr
Match: XP_023550589.1 (NAP1-related protein 2-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 339.7 bits (870), Expect = 1.6e-89 Identity = 172/186 (92.47%), Postives = 176/186 (94.62%), Query Frame = 0
BLAST of MS003214 vs. NCBI nr
Match: XP_023533088.1 (NAP1-related protein 1-like isoform X1 [Cucurbita pepo subsp. pepo] >KAG6602492.1 NAP1-related protein 2, partial [Cucurbita argyrosperma subsp. sororia]) HSP 1 Score: 334.3 bits (856), Expect = 6.6e-88 Identity = 170/186 (91.40%), Postives = 176/186 (94.62%), Query Frame = 0
BLAST of MS003214 vs. NCBI nr
Match: XP_023533093.1 (NAP1-related protein 2-like isoform X2 [Cucurbita pepo subsp. pepo] >KAG7033166.1 NAP1-related protein 2 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 334.3 bits (856), Expect = 6.6e-88 Identity = 170/186 (91.40%), Postives = 176/186 (94.62%), Query Frame = 0
BLAST of MS003214 vs. ExPASy Swiss-Prot
Match: Q8LC68 (NAP1-related protein 2 OS=Arabidopsis thaliana OX=3702 GN=NRP2 PE=1 SV=2) HSP 1 Score: 242.7 bits (618), Expect = 3.4e-63 Identity = 124/186 (66.67%), Postives = 148/186 (79.57%), Query Frame = 0
BLAST of MS003214 vs. ExPASy Swiss-Prot
Match: Q9CA59 (NAP1-related protein 1 OS=Arabidopsis thaliana OX=3702 GN=NRP1 PE=1 SV=1) HSP 1 Score: 241.5 bits (615), Expect = 7.6e-63 Identity = 123/187 (65.78%), Postives = 149/187 (79.68%), Query Frame = 0
BLAST of MS003214 vs. ExPASy Swiss-Prot
Match: Q69JW2 (NAP1-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0576700 PE=2 SV=1) HSP 1 Score: 226.1 bits (575), Expect = 3.3e-58 Identity = 117/185 (63.24%), Postives = 146/185 (78.92%), Query Frame = 0
BLAST of MS003214 vs. ExPASy Swiss-Prot
Match: B8AEC1 (NAP1-related protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=OsI_07785 PE=2 SV=1) HSP 1 Score: 225.7 bits (574), Expect = 4.3e-58 Identity = 118/185 (63.78%), Postives = 145/185 (78.38%), Query Frame = 0
BLAST of MS003214 vs. ExPASy Swiss-Prot
Match: A2XU85 (NAP1-related protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=H0219H12.3 PE=3 SV=1) HSP 1 Score: 211.8 bits (538), Expect = 6.5e-54 Identity = 107/183 (58.47%), Postives = 140/183 (76.50%), Query Frame = 0
BLAST of MS003214 vs. ExPASy TrEMBL
Match: A0A6J1BXW0 (NAP1-related protein 2-like OS=Momordica charantia OX=3673 GN=LOC111006708 PE=3 SV=1) HSP 1 Score: 360.9 bits (925), Expect = 3.2e-96 Identity = 183/186 (98.39%), Postives = 184/186 (98.92%), Query Frame = 0
BLAST of MS003214 vs. ExPASy TrEMBL
Match: A0A6J1JTH3 (NAP1-related protein 2-like OS=Cucurbita maxima OX=3661 GN=LOC111489586 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.0e-90 Identity = 173/186 (93.01%), Postives = 177/186 (95.16%), Query Frame = 0
BLAST of MS003214 vs. ExPASy TrEMBL
Match: A0A6J1FEK7 (NAP1-related protein 2-like OS=Cucurbita moschata OX=3662 GN=LOC111445017 PE=3 SV=1) HSP 1 Score: 341.7 bits (875), Expect = 2.0e-90 Identity = 173/186 (93.01%), Postives = 177/186 (95.16%), Query Frame = 0
BLAST of MS003214 vs. ExPASy TrEMBL
Match: A0A6J1GVT4 (NAP1-related protein 2-like isoform X2 OS=Cucurbita moschata OX=3662 GN=LOC111457879 PE=3 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87 Identity = 169/186 (90.86%), Postives = 175/186 (94.09%), Query Frame = 0
BLAST of MS003214 vs. ExPASy TrEMBL
Match: A0A6J1GVL4 (NAP1-related protein 1-like isoform X1 OS=Cucurbita moschata OX=3662 GN=LOC111457879 PE=3 SV=1) HSP 1 Score: 331.6 bits (849), Expect = 2.1e-87 Identity = 169/186 (90.86%), Postives = 175/186 (94.09%), Query Frame = 0
BLAST of MS003214 vs. TAIR 10
Match: AT1G18800.1 (NAP1-related protein 2 ) HSP 1 Score: 242.7 bits (618), Expect = 2.4e-64 Identity = 124/186 (66.67%), Postives = 148/186 (79.57%), Query Frame = 0
BLAST of MS003214 vs. TAIR 10
Match: AT1G74560.1 (NAP1-related protein 1 ) HSP 1 Score: 241.5 bits (615), Expect = 5.4e-64 Identity = 123/187 (65.78%), Postives = 149/187 (79.68%), Query Frame = 0
BLAST of MS003214 vs. TAIR 10
Match: AT1G74560.2 (NAP1-related protein 1 ) HSP 1 Score: 241.5 bits (615), Expect = 5.4e-64 Identity = 123/187 (65.78%), Postives = 149/187 (79.68%), Query Frame = 0
BLAST of MS003214 vs. TAIR 10
Match: AT1G74560.3 (NAP1-related protein 1 ) HSP 1 Score: 241.5 bits (615), Expect = 5.4e-64 Identity = 123/187 (65.78%), Postives = 149/187 (79.68%), Query Frame = 0
BLAST of MS003214 vs. TAIR 10
Match: AT2G19480.1 (nucleosome assembly protein 1;2 ) HSP 1 Score: 59.7 bits (143), Expect = 2.9e-09 Identity = 52/205 (25.37%), Postives = 99/205 (48.29%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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