MS003202 (gene) Bitter gourd (TR) v1

Overview


Name	MS003202
Type	gene
Organism	Momordica charantia cv. TR (Bitter gourd (TR) v1)
Description	Protein CLP1 homolog
Location	scaffold234: 1141336 .. 1144576 (+)
RNA-Seq Expression	MS003202
Synteny	MS003202

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGCGTATGGTGGTCCACCCACAGCGGCTGGCTCGGGATCGACTTCTTCAATCAGACAGGTCAAGCTGGATAGAGAGAGCGAGCTCAGGATTGAAGTTGGAAACGACTCACCTCTCCGTTTGCGGCTGGTATCTGGTAATGCTGAGATCTTCGGCACGGAGCTTCCTCCTGAAATATGGCTCACCTTACCACCGAGGCTGAAAATTGCCGTAAGCTTTAATAAACTACACTCTTTTGCTGCACAATTTGATTTATTCAAGCTTCAGAACTATATTTGATTTCAAATTTACTTTGCATTATTGTCTTTCTTGGTTCTTTTAATTGCGTTATAACAGGATTAACAGGGGGGAAAATGCTATTGTTTTCACAAATTCGCAACTTTTCTAATCATTCATAAGCAAGCTATTTAATTTGAAAATTGTATTTGGACTGCTCTGCTTTAATTTATAGTTTTTCCATTATGTTAATCTAAGTTTTGAGTTTGATGTAAAAGGTTTTCACTTGGTATGGAGCCACGCTTGAAATGGATGGTGCAACTGAAACTGATTATACGGCAGATGAGGTATAAGTTTTGCTGGTTTATATAAGCTTATGAAGGAGATAGTCTTCACTGCACTAGCAATTTTTTCTTCAATGGCTAAGAATCAATTCTCTACTGTTTATTTTCAGACACCCATGATTGGTTATGTGAATGCCCATGCCATACTTGAAGGAAGAAGAAGCCGTGCTAGAGCATCATCATCTGATGACTCTGGTTCTACTCAGGTTCTTCTTTTCTTTTTTCCAATCAAAATAGTTGTCTCAGCTAGTTTTTCAGTTTTGTGTTTATGCACGCTAATGACATAGATACATAATTTCGTTCACTCCATTGATATTTACTATACCCTTTTTTATTTTATTAGGGTCCACGGGTAATTGTTGTGGGGCCTACTGACTCAGGTAAGAGCACCTTGTCTAGGATGCTTCTTAGTTGGGCTGCAAAACAGGGTTGGAAGCCTACATTTGTGGACTTGGATATTGGCCAAGGATCTATAACAATTCCTGGATGCATTGCTGCTACCCCTATTGAGTTGCCCATTGATCCCGTTGATGGAATCCCACTTGAAATGCCCCTGGTGTACTTTTATGGACACACTACTCCAAGGTAAATAAATCTCCCGAGTAACGTTACAGTTTTTACTTTTTCTTCAACTTTTACAGAGTCCTGTTGACCCAATGATATGCTATGCTGCAAATTCTGATAAGAGTAAATTTTCATTTCTAAGCCACATGTAATATATTCCAATGCCCTAAGATTGAGGTTCTTTCACAGCAATAATGTTGATCTGTACAAAGTGCTTGTGAAGGAGCTTGCCGAAGTGCTGGAGAGGCAATTTACTGGCAATGCAGAATCTCGAGCTGCTGGTATGGTTATCAACACAATGGGATGGATTGAGGGTATTGGCTATGAGGTAGTGAAGGCCCTATATGGATTATGTAATTTTTTGTACATTGGTTATGCTAATTTTCATTACCATTATTGCCTAAGTATCAATGTTTCTGTATGCTGTCTTATTGCAGCTGCTTCTACATGCAATTGACACGCTGAATGCCAATGTAGTCTTGGTTTTGGGTCAGGTAAGCTGCTGCCTTTTCTGTTTCTCTCAATTCTGGATCTTGGTTTAACTGGAAATTGGAACTTACTGTGAACCCTTCTGGTGTTAAATGAAGGACAATTGTGAGGCAATATATTTCCTATTAATTAAATCCATCTATTCTTCTAGTAATAAAAAAACCCAAAAAATCTCTAAGAATAAGATTTTGTACCTTAAGAAAGCCAACCTCTAAAGGCAATATCCAAGTAAGTTCTGGAACATCTGATTGTAACTTTCCGTTTTCTTCTGTTTTTTAGGAGAAACTTTGGAGCATGCTTAAAGATGTACTAAAGAACAAGCCTAATGTGGATGTTGTAAAACTCCAAAAGTCAGGTGGTGTTGTATCCAGAAATGCCAAATTTCGTCAAAAGGCCAGGAGTTACAGAATAAGGGTAAGCAAGTTGTTTGTAACAATGGTGGATGATTGGAATTATTCTAACAATCTTCTCTTTGACCCTTTCAACTGACAACTGAACTGGCTTCCTCAATCTTTATGCAATTTATCTAACCCATTATAATTCAACTGAATTGAATCCTTGCCATGGAATCCCTTCTGTTCCATTTTTCAACCGGAAAGGCTATTATGGACTGACGAGGTGATGTTTTTGCAGGAATATTTTTATGGCCCTGCAAATGATCTCTCACCACACTCCAACATTGCAAACTTTAACGATCTATTCATTTATCGCATTGGCGGTGGACCTCAGGCGCCTCGTTCGGCACTACCTATTGGTGCAGAACCTGCTGCAGACCCCACAAGATTAGTGCCTGTCAACATTAATCGAGATTTGCTCCATTTGGTTCTTGCTGTTTCATTTGCCAAAGAACCTGATGAAATTATGTCAAGGTGAGTTATATTTTGAAATATTGCTTTCCTTTTCTTTATTAAATTACTTTTTTAATCTCTACTTTTTCTAGAATTTCGTTATCATCTATATCCTTTAATGATAGTTTACCAATACTAGAGTAGGATTTATTCTAGCCCTAAAAATAGTAAGCAGATACACAACAGGCTGGTTACACTCAAGCAGGAGTAACTCTAGCCCCATTCTATTTTCTCTTTAAAATAATATTTTAGAACTCGACTCAAATTCATTTTTTTAACTATTGTGACTGCTTGTACTCTTATGTCATCAATACAAAATATCACATCCTGGAAGTTCATTTGCTACATTCACTAATAGCTTGTCCCGTTGGATTTCTTTTACTCTTCACCAGCAGATGTCTTGTAACTTCAACCAAAGCATAAAGATGATAATAAAACTTTTAAAAGCATTGATACCAAATTGAAGTAAAGTCTAAAGGATAGATACTCAAATTGTAATGTATCTCTGTTTTTACAAGTTATTAATTTCTTCCCTTTTTGGGTGCAGCAATGTTGCTGGATTTGTGTATGTTACTGACATTGACATCCAAAGGTTTGAACTAAACAATATGCTAATTATTTTGATAAAAGGACGTGGAAATCTGAAACTTTAGCTTCAACTAATTCTAATAATGGGAGTTGTTGGTGAATGACAGGAAGAAACTTACATATCTTGCGCCATCGGCAGGGGAACTTCCAGGCAAATATTTGATTATGGGAACTTTGACCTGGCTTGAGACC

mRNA sequence

ATGGCGTATGGTGGTCCACCCACAGCGGCTGGCTCGGGATCGACTTCTTCAATCAGACAGGTCAAGCTGGATAGAGAGAGCGAGCTCAGGATTGAAGTTGGAAACGACTCACCTCTCCGTTTGCGGCTGGTATCTGGTAATGCTGAGATCTTCGGCACGGAGCTTCCTCCTGAAATATGGCTCACCTTACCACCGAGGCTGAAAATTGCCGTTTTCACTTGGTATGGAGCCACGCTTGAAATGGATGGTGCAACTGAAACTGATTATACGGCAGATGAGACACCCATGATTGGTTATGTGAATGCCCATGCCATACTTGAAGGAAGAAGAAGCCGTGCTAGAGCATCATCATCTGATGACTCTGGTTCTACTCAGGGTCCACGGGTAATTGTTGTGGGGCCTACTGACTCAGGTAAGAGCACCTTGTCTAGGATGCTTCTTAGTTGGGCTGCAAAACAGGGTTGGAAGCCTACATTTGTGGACTTGGATATTGGCCAAGGATCTATAACAATTCCTGGATGCATTGCTGCTACCCCTATTGAGTTGCCCATTGATCCCGTTGATGGAATCCCACTTGAAATGCCCCTGGTGTACTTTTATGGACACACTACTCCAAGCAATAATGTTGATCTGTACAAAGTGCTTGTGAAGGAGCTTGCCGAAGTGCTGGAGAGGCAATTTACTGGCAATGCAGAATCTCGAGCTGCTGGTATGGTTATCAACACAATGGGATGGATTGAGGGTATTGGCTATGAGCTGCTTCTACATGCAATTGACACGCTGAATGCCAATGTAGTCTTGGTTTTGGGTCAGGAGAAACTTTGGAGCATGCTTAAAGATGTACTAAAGAACAAGCCTAATGTGGATGTTGTAAAACTCCAAAAGTCAGGTGGTGTTGTATCCAGAAATGCCAAATTTCGTCAAAAGGCCAGGAGTTACAGAATAAGGGAATATTTTTATGGCCCTGCAAATGATCTCTCACCACACTCCAACATTGCAAACTTTAACGATCTATTCATTTATCGCATTGGCGGTGGACCTCAGGCGCCTCGTTCGGCACTACCTATTGGTGCAGAACCTGCTGCAGACCCCACAAGATTAGTGCCTGTCAACATTAATCGAGATTTGCTCCATTTGGTTCTTGCTGTTTCATTTGCCAAAGAACCTGATGAAATTATGTCAAGCAATGTTGCTGGATTTGTGTATGTTACTGACATTGACATCCAAAGGAAGAAACTTACATATCTTGCGCCATCGGCAGGGGAACTTCCAGGCAAATATTTGATTATGGGAACTTTGACCTGGCTTGAGACC

Coding sequence (CDS)

ATGGCGTATGGTGGTCCACCCACAGCGGCTGGCTCGGGATCGACTTCTTCAATCAGACAGGTCAAGCTGGATAGAGAGAGCGAGCTCAGGATTGAAGTTGGAAACGACTCACCTCTCCGTTTGCGGCTGGTATCTGGTAATGCTGAGATCTTCGGCACGGAGCTTCCTCCTGAAATATGGCTCACCTTACCACCGAGGCTGAAAATTGCCGTTTTCACTTGGTATGGAGCCACGCTTGAAATGGATGGTGCAACTGAAACTGATTATACGGCAGATGAGACACCCATGATTGGTTATGTGAATGCCCATGCCATACTTGAAGGAAGAAGAAGCCGTGCTAGAGCATCATCATCTGATGACTCTGGTTCTACTCAGGGTCCACGGGTAATTGTTGTGGGGCCTACTGACTCAGGTAAGAGCACCTTGTCTAGGATGCTTCTTAGTTGGGCTGCAAAACAGGGTTGGAAGCCTACATTTGTGGACTTGGATATTGGCCAAGGATCTATAACAATTCCTGGATGCATTGCTGCTACCCCTATTGAGTTGCCCATTGATCCCGTTGATGGAATCCCACTTGAAATGCCCCTGGTGTACTTTTATGGACACACTACTCCAAGCAATAATGTTGATCTGTACAAAGTGCTTGTGAAGGAGCTTGCCGAAGTGCTGGAGAGGCAATTTACTGGCAATGCAGAATCTCGAGCTGCTGGTATGGTTATCAACACAATGGGATGGATTGAGGGTATTGGCTATGAGCTGCTTCTACATGCAATTGACACGCTGAATGCCAATGTAGTCTTGGTTTTGGGTCAGGAGAAACTTTGGAGCATGCTTAAAGATGTACTAAAGAACAAGCCTAATGTGGATGTTGTAAAACTCCAAAAGTCAGGTGGTGTTGTATCCAGAAATGCCAAATTTCGTCAAAAGGCCAGGAGTTACAGAATAAGGGAATATTTTTATGGCCCTGCAAATGATCTCTCACCACACTCCAACATTGCAAACTTTAACGATCTATTCATTTATCGCATTGGCGGTGGACCTCAGGCGCCTCGTTCGGCACTACCTATTGGTGCAGAACCTGCTGCAGACCCCACAAGATTAGTGCCTGTCAACATTAATCGAGATTTGCTCCATTTGGTTCTTGCTGTTTCATTTGCCAAAGAACCTGATGAAATTATGTCAAGCAATGTTGCTGGATTTGTGTATGTTACTGACATTGACATCCAAAGGAAGAAACTTACATATCTTGCGCCATCGGCAGGGGAACTTCCAGGCAAATATTTGATTATGGGAACTTTGACCTGGCTTGAGACC

Protein sequence

MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVINTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSAGELPGKYLIMGTLTWLET

Homology

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BLAST of MS003202 vs. NCBI nr
Match: XP_022134389.1 (protein CLP1 homolog [Momordica charantia])

HSP 1 Score: 874.8 bits (2259), Expect = 3.2e-250
Identity = 437/438 (99.77%), Postives = 437/438 (99.77%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAKFRQKARSYRIREYFYGPAND SPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDFSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           GELPGKYLIMGTLTWLET
Sbjct: 421 GELPGKYLIMGTLTWLET 438

[Close]

BLAST of MS003202 vs. NCBI nr
Match: XP_023533688.1 (protein CLP1 homolog [Cucurbita pepo subsp. pepo])

HSP 1 Score: 850.5 bits (2196), Expect = 6.4e-243
Identity = 419/438 (95.66%), Postives = 433/438 (98.86%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP T AGS STSS+RQVKLDRESELRIEVGNDSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILE RRSRARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLVKELA+VLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEPDEI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           G+LPGKYLI+GTLTW+ET
Sbjct: 421 GDLPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. NCBI nr
Match: XP_038889139.1 (protein CLP1 homolog isoform X1 [Benincasa hispida])

HSP 1 Score: 850.5 bits (2196), Expect = 6.4e-243
Identity = 421/438 (96.12%), Postives = 432/438 (98.63%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP   AGS STSSIRQVKLDRESELRIEVGNDSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPAIVAGSASTSSIRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILE RRSRARASSSDD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLVKELA+VLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEP+EI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPEEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           GELPGKYLI+GTLTW+ET
Sbjct: 421 GELPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. NCBI nr
Match: XP_022921936.1 (protein CLP1 homolog [Cucurbita moschata] >KAG6602481.1 Protein CLP1-like protein, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033157.1 Protein CLP1-like protein, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 848.2 bits (2190), Expect = 3.2e-242
Identity = 417/438 (95.21%), Postives = 433/438 (98.86%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP T AGS STSS+RQVKLDRESELRIEVGNDSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILE RR+RARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRNRARASSADD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SG+TQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGATQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLVKELA+VLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEPDEI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           G+LPGKYLI+GTLTW+ET
Sbjct: 421 GDLPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. NCBI nr
Match: XP_022990827.1 (protein CLP1 homolog [Cucurbita maxima])

HSP 1 Score: 847.4 bits (2188), Expect = 5.4e-242
Identity = 418/438 (95.43%), Postives = 432/438 (98.63%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP T AGS STSS+RQVKLDRESELRIEVGNDSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILE RRSRARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLVKELA+VLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKP VDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPYVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEPDEI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           G+LPGKYLI+GTLTW+ET
Sbjct: 421 GDLPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. ExPASy Swiss-Prot
Match: Q9SR06 (Protein CLP1 homolog OS=Arabidopsis thaliana OX=3702 GN=CLPS3 PE=1 SV=1)

HSP 1 Score: 640.2 bits (1650), Expect = 1.7e-182
Identity = 309/444 (69.59%), Postives = 387/444 (87.16%), Query Frame = 0


Query: 1   MAYGG----PPTAAGS-GSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTEL 60
           MAYGG    PP  +G+   +++++QVKL+RESELRIEV ++ PLRLR+V+G AEIFG+EL
Sbjct: 1   MAYGGPSMNPPALSGAVPGSANLKQVKLERESELRIEV-SEEPLRLRVVNGTAEIFGSEL 60

Query: 61  PPEIWLTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARA 120
           PPEIW T PPR+K AVFTWYGAT+EMDG TETDYTADETPM+ Y+N HAIL+ RR  A+A
Sbjct: 61  PPEIWRTFPPRMKFAVFTWYGATIEMDGVTETDYTADETPMVSYINVHAILDARRRFAKA 120

Query: 121 SSSDDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCI 180
           S+S+D  S+QGPRVIVVGPTDSGKSTL++MLLSWAAKQGW+PTFVDLD+GQGSITIPG I
Sbjct: 121 STSNDPESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVDLDVGQGSITIPGSI 180

Query: 181 AATPIELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRA 240
           AA PIE+P+DPV+G PL+M LVY+YGH +P+ NV+LYK LVKELA+VLE+QF GN ESRA
Sbjct: 181 AAAPIEMPLDPVEGFPLDMALVYYYGHASPNMNVELYKALVKELAQVLEKQFVGNPESRA 240

Query: 241 AGMVINTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQK 300
           AGMVINTMGWIEGIGYELLLHAIDT NA+VVLVLGQEKL+S LKDVL++K NVDVVKL K
Sbjct: 241 AGMVINTMGWIEGIGYELLLHAIDTFNASVVLVLGQEKLFSRLKDVLRSKSNVDVVKLHK 300

Query: 301 SGGVVSRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALP 360
           SGGVV+R  + R+++R+++I+EYFYG + +LSP++N ++F+DL ++RIGGGPQAP+SALP
Sbjct: 301 SGGVVARVKEVRKRSRNFKIQEYFYGLSKELSPYANTSSFSDLQVFRIGGGPQAPKSALP 360

Query: 361 IGAEPAADPTRLVPVNI-NRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLT 420
            G+   ++P R+ PVNI +RDLLH VLAVS+A+EPD+I+SSNV+GFVYVT++++Q+KK+T
Sbjct: 361 AGSTSVSNPLRVTPVNIDDRDLLHSVLAVSYAEEPDQIISSNVSGFVYVTEVNVQKKKIT 420

Query: 421 YLAPSAGELPGKYLIMGTLTWLET 439
           YLAPS G LP K L+ G+L WLE+
Sbjct: 421 YLAPSPGTLPSKLLVAGSLAWLES 443

[Close]

BLAST of MS003202 vs. ExPASy Swiss-Prot
Match: Q9FLE2 (Protein CLP1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CLPS5 PE=1 SV=1)

HSP 1 Score: 445.3 bits (1144), Expect = 8.1e-124
Identity = 223/419 (53.22%), Postives = 306/419 (73.03%), Query Frame = 0


Query: 18  IRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYGA 77
           IR+VKL+++SELRIE+   SPLRLRL+ G AEIFG ELP E+W+T PP +  AVFTWYGA
Sbjct: 6   IRRVKLEKQSELRIELQPTSPLRLRLLDGKAEIFGYELPHEVWITFPPLMTFAVFTWYGA 65

Query: 78  TLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDDSGSTQGPRVIVVGPTDS 137
           T+E+DG T  +Y + ETPM+ Y+  H  L+ +R R  +S+ D + S +GPRVI+VG  DS
Sbjct: 66  TIEIDGITGNEYISCETPMVNYLGLHNSLQVQRHRVTSSTRDSASSQEGPRVIIVGDIDS 125

Query: 138 GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVDGIPLEMPLV 197
           GKSTL++MLL+WA K GWKPTFVDL++GQ SITIPG IAA PI++ +DPV+G PL+  L+
Sbjct: 126 GKSTLAKMLLNWAVKDGWKPTFVDLNVGQSSITIPGTIAAAPIKMLVDPVEGFPLDKALI 185

Query: 198 YFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVINTMGWIEGIGYELLLHA 257
           +++G T PS N+ LY+ LV+ELA  L+ +F+ NAESRA+GMVI+TMG+I   GY LLLHA
Sbjct: 186 HYFGLTNPSVNLRLYRTLVEELARELKEEFSANAESRASGMVIDTMGFIVREGYALLLHA 245

Query: 258 IDTLNANVVLVLGQ-EKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIR 317
           I T NA++V+V+GQ EKL   LK  LK K N+ V+ L+KS GV SR++ FR+  R+  I+
Sbjct: 246 IRTFNASLVIVVGQEEKLVYDLKKNLKFKKNLQVLNLEKSEGVFSRSSDFRKTLRNSNIQ 305

Query: 318 EYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDL 377
            YFYG  NDL+ ++    F+D+ +YRIG       S      +   DP ++  V I+  L
Sbjct: 306 NYFYGVTNDLTVYTKTVKFSDVQVYRIG---DFRVSGSTSAHQRGNDPLKITLVTIDEHL 365

Query: 378 LHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSAGELPGKYLIMGTLTW 436
           ++ VLA+S+A +PD+I+SS VAGFV + ++DI  +++TY++PSA ELP K LI+GTLTW
Sbjct: 366 VNKVLAISYAIKPDQIISSIVAGFVCIKNVDISEERITYVSPSAAELPSKILILGTLTW 421

[Close]

BLAST of MS003202 vs. ExPASy Swiss-Prot
Match: Q54N48 (Protein CLP1 homolog OS=Dictyostelium discoideum OX=44689 GN=clp1 PE=3 SV=1)

HSP 1 Score: 357.8 bits (917), Expect = 1.7e-97
Identity = 189/423 (44.68%), Postives = 271/423 (64.07%), Query Frame = 0


Query: 16  SSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIWLTLPPRLKIAVFTWY 75
           S+IR +++ +  ELR E+  D    ++L+ G AE FGTEL       L    K AVFTW 
Sbjct: 45  STIRTLEITQ--ELRYEIDFDQNGWMKLIEGTAECFGTELSLNKVYKL-SGTKGAVFTWT 104

Query: 76  GATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDDSGSTQGPRVIVVGPT 135
           G  +E+    +  Y  ++TPM  Y   +  L+  R      S  D     GPRVI+VGPT
Sbjct: 105 GCKIEITNNCQ-PYIGEKTPMPQYAGVYQELDAFR-----VSILDEPKKSGPRVIIVGPT 164

Query: 136 DSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVDGIPLEMP 195
           DSGKS+LS++LL+++A+ G++P FVDLD GQGSITIPG I+A  I+ P+D  +G+   +P
Sbjct: 165 DSGKSSLSKILLAYSARSGYQPLFVDLDPGQGSITIPGTISAAHIQNPLDIEEGLAGGIP 224

Query: 196 LVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVINTMGWIEGIGYELLL 255
           L +FYGHT+   N DL+K L K LA  +++Q   +  SR +G + NT GWI+G+GY++LL
Sbjct: 225 LAHFYGHTSLDVNPDLFKALCKNLASFIDKQLDSSNISRISGFIANTCGWIDGLGYKILL 284

Query: 256 HAIDTLNANVVLVLGQEKLWSMLKDVLKNKPN-VDVVKLQKSGGVVSRNAKFRQKARSYR 315
             ID   AN+++V+  EKL+S +      K N + ++KL KSGGV  R   FR+K R  R
Sbjct: 285 QNIDVFKANLIIVMDNEKLYSDISSHYSQKDNSIKIIKLPKSGGVFIRPPVFRKKTRMNR 344

Query: 316 IREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINR 375
           I+EYF G  ++LSPH  + +F D+ IYR GGGP AP SALPIG     DP ++  V  + 
Sbjct: 345 IKEYFNGINDNLSPHYIVLDFKDVSIYRTGGGPAAPASALPIGTSSQIDPLQITEVYPSL 404

Query: 376 DLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSAGELPGKYLIMGTLT 435
           D+ H + A+S+AK+   I  SNVAGF+YV+DID++ KK+T ++P+ G LP ++L++GTL 
Sbjct: 405 DMCHSIFAISYAKQASNIFHSNVAGFLYVSDIDMETKKITVISPAPGPLPSRFLLLGTLK 458

Query: 436 WLE 438
           W+E
Sbjct: 465 WME 458

[Close]

BLAST of MS003202 vs. ExPASy Swiss-Prot
Match: Q5ZJL4 (Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Gallus gallus OX=9031 GN=CLP1 PE=2 SV=2)

HSP 1 Score: 347.4 bits (890), Expect = 2.3e-94
Identity = 181/428 (42.29%), Postives = 269/428 (62.85%), Query Frame = 0


Query: 11  GSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIWLTLPPRLKIA 70
           G      + + +L+RE+ELR EV     +++ L++G AE+FGTEL      T     K+A
Sbjct: 5   GGDEKKQVAKFELERETELRFEVEASQTVQMELLTGMAEVFGTELTRNKKFTFDAGAKVA 64

Query: 71  VFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDDSGSTQGPRVI 130
           VFTW+G T+++ G TE  Y + +TPM+ Y+N H  LE  + R +A   D+    +GPRV+
Sbjct: 65  VFTWHGCTVQLSGRTEVAYVSKDTPMLLYLNTHTALE--QMRRQAEREDE----RGPRVM 124

Query: 131 VVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVDGI 190
           VVGPTD GKST+ R+LL++A + G +PTFV+LD+GQGS++IPG + A  IE P D  +G 
Sbjct: 125 VVGPTDVGKSTVCRLLLNYAVRLGRRPTFVELDVGQGSVSIPGTMGALYIERPADVEEGF 184

Query: 191 PLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVINTMGWIEGIG 250
            L+ PLVY +G TTP  N+ LY  +   LA+V  ++   N  +  +G VINT GW++G G
Sbjct: 185 SLQAPLVYHFGSTTPGTNIKLYNKITSRLADVFNQRCEVNRRASVSGCVINTCGWVKGSG 244

Query: 251 YELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKA 310
           Y+ L+HA      +VV+VL QE+L++ LK  L +   V  V L KSGGVV R+  FR++ 
Sbjct: 245 YQALVHAASAFEVDVVVVLDQERLYNELKRDLPH--FVRTVLLPKSGGVVERSKDFRREC 304

Query: 311 RSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPV 370
           R  RIREYFYG      PH+    F+D+ IY++ G P  P S LP+G     +  +LVPV
Sbjct: 305 RDDRIREYFYGFRGCFYPHAFDVKFSDVKIYKV-GAPTIPDSCLPLGMSQEDNQLKLVPV 364

Query: 371 NINRDLLHLVLAVSFAKEPDE-IMSSNVAGFVYVTDIDIQRKKLTYLAPSAGELPGKYLI 430
              RD++H +L+VS A  PD+ I  ++VAGF+ VT +D++R+  T L+P+   LP  +L+
Sbjct: 365 TPGRDMVHHLLSVSMADSPDDNISETSVAGFIVVTGVDLERQVFTVLSPAPRPLPKNFLL 423

Query: 431 MGTLTWLE 438
           +  + +++
Sbjct: 425 IMDIRFMD 423

[Close]

BLAST of MS003202 vs. ExPASy Swiss-Prot
Match: A7RG82 (Protein CLP1 homolog OS=Nematostella vectensis OX=45351 GN=v1g236308 PE=3 SV=1)

HSP 1 Score: 344.4 bits (882), Expect = 1.9e-93
Identity = 176/421 (41.81%), Postives = 274/421 (65.08%), Query Frame = 0


Query: 19  RQVKLDRESELRIEVG-NDSPLRLRLVSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYGA 78
           +Q KL++++ELR+EV   D    + L+SGNAE+FGTEL      T  P  K+A+FTW G 
Sbjct: 13  QQWKLEKDTELRVEVAEGDREAIIVLLSGNAEVFGTELVKNKKFTFRPGSKLAIFTWQGC 72

Query: 79  TLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDDSGSTQGPRVIVVGPTDS 138
           ++E+ G  E  Y + ETPM+ Y+N H  LE  R RA    + +     GPRV+VVGPTD 
Sbjct: 73  SVEIQGPLEVAYKSKETPMVMYLNLHMALEQMRERADKHEAVE----LGPRVMVVGPTDV 132

Query: 139 GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVDGIPLEMPLV 198
           GKST+ ++LL++A + G +P  VDLD+GQG+ ++PG + A  +E P D  +G  L+ PLV
Sbjct: 133 GKSTVCQLLLNYAVRMGRRPISVDLDVGQGTASVPGSMGALLLERPADIEEGFSLQAPLV 192

Query: 199 YFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVINTMGWIEGIGYELLLHA 258
           Y +GHT+PS N  LY +L  ++A+++ ++F  N ++ A+G VINT GW+ G+GY +++HA
Sbjct: 193 YLFGHTSPSPNEKLYNMLSSKIADIVFQRFERNKKACASGCVINTCGWVTGMGYRIIVHA 252

Query: 259 IDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIRE 318
                 NV++VL QE+L++ LK+   +K  V +V L KSGGVV R+ + R+K R  R+R 
Sbjct: 253 ATAFKVNVIVVLDQERLYNDLKNQFGDK--VQIVHLPKSGGVVVRSRETRRKVRDERLRS 312

Query: 319 YFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDLL 378
           YFYG   +L PHS    F+D+ +++I G P  P S LP+G +   + T+LVPV   +DL 
Sbjct: 313 YFYGQQANLYPHSFEVKFSDVKLFKI-GAPLVPDSCLPLGMDQGQNETKLVPVVPTKDLK 372

Query: 379 HLVLAVSFAKEPDE-IMSSNVAGFVYVTDIDIQRKKLTYLAPSAGELPGKYLIMGTLTWL 438
           H +LA+S A+  +E ++ +NV GF+ V ++D+ R+ +  L+P+   LP K+L++  + ++
Sbjct: 373 HCLLAISAAESLEEDLVQTNVIGFLVVNEVDLDREVMVVLSPAPRPLPRKFLLLSEIKFM 426

[Close]

BLAST of MS003202 vs. ExPASy TrEMBL
Match: A0A6J1BYM6 (Protein CLP1 homolog OS=Momordica charantia OX=3673 GN=LOC111006662 PE=3 SV=1)

HSP 1 Score: 874.8 bits (2259), Expect = 1.5e-250
Identity = 437/438 (99.77%), Postives = 437/438 (99.77%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAKFRQKARSYRIREYFYGPAND SPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDFSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           GELPGKYLIMGTLTWLET
Sbjct: 421 GELPGKYLIMGTLTWLET 438

[Close]

BLAST of MS003202 vs. ExPASy TrEMBL
Match: A0A6J1E2R2 (Protein CLP1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111430040 PE=3 SV=1)

HSP 1 Score: 848.2 bits (2190), Expect = 1.5e-242
Identity = 417/438 (95.21%), Postives = 433/438 (98.86%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP T AGS STSS+RQVKLDRESELRIEVGNDSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILE RR+RARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRNRARASSADD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SG+TQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGATQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLVKELA+VLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEPDEI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           G+LPGKYLI+GTLTW+ET
Sbjct: 421 GDLPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. ExPASy TrEMBL
Match: A0A6J1JJY4 (Protein CLP1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111487604 PE=3 SV=1)

HSP 1 Score: 847.4 bits (2188), Expect = 2.6e-242
Identity = 418/438 (95.43%), Postives = 432/438 (98.63%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP T AGS STSS+RQVKLDRESELRIEVGNDSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASTSSVRQVKLDRESELRIEVGNDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILE RRSRARASS+DD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSADD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
           SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLVKELA+VLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKP VDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPYVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAK+RQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKYRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEPDEI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           G+LPGKYLI+GTLTW+ET
Sbjct: 421 GDLPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. ExPASy TrEMBL
Match: A0A0A0KU52 (Protein CLP1 homolog OS=Cucumis sativus OX=3659 GN=Csa_5G635390 PE=3 SV=1)

HSP 1 Score: 847.0 bits (2187), Expect = 3.4e-242
Identity = 419/438 (95.66%), Postives = 431/438 (98.40%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP T AGS S SSIRQVKLDRESELRIEVG+DSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASASSIRQVKLDRESELRIEVGSDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILE RRSRARASSSDD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEARRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
            GSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 PGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLVKELA+VLERQFTGNAESRAAGMVI
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAQVLERQFTGNAESRAAGMVI 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
           AADPTRLVPVNINRDLLHLVLAVSFAKEP+EI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPEEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           GELPGKYLI+GTLTW+ET
Sbjct: 421 GELPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. ExPASy TrEMBL
Match: A0A5A7TDF1 (Protein CLP1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892G00480 PE=3 SV=1)

HSP 1 Score: 845.9 bits (2184), Expect = 7.6e-242
Identity = 417/438 (95.21%), Postives = 431/438 (98.40%), Query Frame = 0


Query: 1   MAYGGPPTAAGSGSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIW 60
           MAYGGP T AGS STSSIRQVKLDRESELRIEVG+DSPLRLRL+SGNAEIFGTELPPEIW
Sbjct: 1   MAYGGPATVAGSASTSSIRQVKLDRESELRIEVGSDSPLRLRLLSGNAEIFGTELPPEIW 60

Query: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDD 120
           LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVN HAILEGRRSRARASSSDD
Sbjct: 61  LTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNVHAILEGRRSRARASSSDD 120

Query: 121 SGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180
            GSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI
Sbjct: 121 PGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPI 180

Query: 181 ELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVI 240
           ELPIDPV+GIPLEMPLVYFYGHTTPSNNVDLYKVLV+ELA+VLERQ TGNAESRAAGMV+
Sbjct: 181 ELPIDPVEGIPLEMPLVYFYGHTTPSNNVDLYKVLVRELAQVLERQLTGNAESRAAGMVV 240

Query: 241 NTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300
           NTMGWIEG+GYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV
Sbjct: 241 NTMGWIEGVGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQKSGGVV 300

Query: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEP 360
           SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANF+DLFIYRIGGGPQAPRSALPIGAEP
Sbjct: 301 SRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFSDLFIYRIGGGPQAPRSALPIGAEP 360

Query: 361 AADPTRLVPVNINRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSA 420
            ADPTRLVPVNINRDLLHLVLAVSFAKEP+EI+SSNVAGFVY+TDIDIQRKK+TYLAPSA
Sbjct: 361 TADPTRLVPVNINRDLLHLVLAVSFAKEPEEIISSNVAGFVYITDIDIQRKKITYLAPSA 420

Query: 421 GELPGKYLIMGTLTWLET 439
           GELPGKYLI+GTLTW+ET
Sbjct: 421 GELPGKYLIVGTLTWIET 438

[Close]

BLAST of MS003202 vs. TAIR 10
Match: AT3G04680.1 (CLP-similar protein 3 )

HSP 1 Score: 640.2 bits (1650), Expect = 1.2e-183
Identity = 309/444 (69.59%), Postives = 387/444 (87.16%), Query Frame = 0


Query: 1   MAYGG----PPTAAGS-GSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTEL 60
           MAYGG    PP  +G+   +++++QVKL+RESELRIEV ++ PLRLR+V+G AEIFG+EL
Sbjct: 1   MAYGGPSMNPPALSGAVPGSANLKQVKLERESELRIEV-SEEPLRLRVVNGTAEIFGSEL 60

Query: 61  PPEIWLTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARA 120
           PPEIW T PPR+K AVFTWYGAT+EMDG TETDYTADETPM+ Y+N HAIL+ RR  A+A
Sbjct: 61  PPEIWRTFPPRMKFAVFTWYGATIEMDGVTETDYTADETPMVSYINVHAILDARRRFAKA 120

Query: 121 SSSDDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCI 180
           S+S+D  S+QGPRVIVVGPTDSGKSTL++MLLSWAAKQGW+PTFVDLD+GQGSITIPG I
Sbjct: 121 STSNDPESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVDLDVGQGSITIPGSI 180

Query: 181 AATPIELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRA 240
           AA PIE+P+DPV+G PL+M LVY+YGH +P+ NV+LYK LVKELA+VLE+QF GN ESRA
Sbjct: 181 AAAPIEMPLDPVEGFPLDMALVYYYGHASPNMNVELYKALVKELAQVLEKQFVGNPESRA 240

Query: 241 AGMVINTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQK 300
           AGMVINTMGWIEGIGYELLLHAIDT NA+VVLVLGQEKL+S LKDVL++K NVDVVKL K
Sbjct: 241 AGMVINTMGWIEGIGYELLLHAIDTFNASVVLVLGQEKLFSRLKDVLRSKSNVDVVKLHK 300

Query: 301 SGGVVSRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALP 360
           SGGVV+R  + R+++R+++I+EYFYG + +LSP++N ++F+DL ++RIGGGPQAP+SALP
Sbjct: 301 SGGVVARVKEVRKRSRNFKIQEYFYGLSKELSPYANTSSFSDLQVFRIGGGPQAPKSALP 360

Query: 361 IGAEPAADPTRLVPVNI-NRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLT 420
            G+   ++P R+ PVNI +RDLLH VLAVS+A+EPD+I+SSNV+GFVYVT++++Q+KK+T
Sbjct: 361 AGSTSVSNPLRVTPVNIDDRDLLHSVLAVSYAEEPDQIISSNVSGFVYVTEVNVQKKKIT 420

Query: 421 YLAPSAGELPGKYLIMGTLTWLET 439
           YLAPS G LP K L+ G+L WLE+
Sbjct: 421 YLAPSPGTLPSKLLVAGSLAWLES 443

[Close]

BLAST of MS003202 vs. TAIR 10
Match: AT3G04680.2 (CLP-similar protein 3 )

HSP 1 Score: 640.2 bits (1650), Expect = 1.2e-183
Identity = 309/444 (69.59%), Postives = 387/444 (87.16%), Query Frame = 0


Query: 1   MAYGG----PPTAAGS-GSTSSIRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTEL 60
           MAYGG    PP  +G+   +++++QVKL+RESELRIEV ++ PLRLR+V+G AEIFG+EL
Sbjct: 1   MAYGGPSMNPPALSGAVPGSANLKQVKLERESELRIEV-SEEPLRLRVVNGTAEIFGSEL 60

Query: 61  PPEIWLTLPPRLKIAVFTWYGATLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARA 120
           PPEIW T PPR+K AVFTWYGAT+EMDG TETDYTADETPM+ Y+N HAIL+ RR  A+A
Sbjct: 61  PPEIWRTFPPRMKFAVFTWYGATIEMDGVTETDYTADETPMVSYINVHAILDARRRFAKA 120

Query: 121 SSSDDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCI 180
           S+S+D  S+QGPRVIVVGPTDSGKSTL++MLLSWAAKQGW+PTFVDLD+GQGSITIPG I
Sbjct: 121 STSNDPESSQGPRVIVVGPTDSGKSTLTKMLLSWAAKQGWRPTFVDLDVGQGSITIPGSI 180

Query: 181 AATPIELPIDPVDGIPLEMPLVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRA 240
           AA PIE+P+DPV+G PL+M LVY+YGH +P+ NV+LYK LVKELA+VLE+QF GN ESRA
Sbjct: 181 AAAPIEMPLDPVEGFPLDMALVYYYGHASPNMNVELYKALVKELAQVLEKQFVGNPESRA 240

Query: 241 AGMVINTMGWIEGIGYELLLHAIDTLNANVVLVLGQEKLWSMLKDVLKNKPNVDVVKLQK 300
           AGMVINTMGWIEGIGYELLLHAIDT NA+VVLVLGQEKL+S LKDVL++K NVDVVKL K
Sbjct: 241 AGMVINTMGWIEGIGYELLLHAIDTFNASVVLVLGQEKLFSRLKDVLRSKSNVDVVKLHK 300

Query: 301 SGGVVSRNAKFRQKARSYRIREYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALP 360
           SGGVV+R  + R+++R+++I+EYFYG + +LSP++N ++F+DL ++RIGGGPQAP+SALP
Sbjct: 301 SGGVVARVKEVRKRSRNFKIQEYFYGLSKELSPYANTSSFSDLQVFRIGGGPQAPKSALP 360

Query: 361 IGAEPAADPTRLVPVNI-NRDLLHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLT 420
            G+   ++P R+ PVNI +RDLLH VLAVS+A+EPD+I+SSNV+GFVYVT++++Q+KK+T
Sbjct: 361 AGSTSVSNPLRVTPVNIDDRDLLHSVLAVSYAEEPDQIISSNVSGFVYVTEVNVQKKKIT 420

Query: 421 YLAPSAGELPGKYLIMGTLTWLET 439
           YLAPS G LP K L+ G+L WLE+
Sbjct: 421 YLAPSPGTLPSKLLVAGSLAWLES 443

[Close]

BLAST of MS003202 vs. TAIR 10
Match: AT5G39930.1 (CLP1-similar protein 5 )

HSP 1 Score: 445.3 bits (1144), Expect = 5.8e-125
Identity = 223/419 (53.22%), Postives = 306/419 (73.03%), Query Frame = 0


Query: 18  IRQVKLDRESELRIEVGNDSPLRLRLVSGNAEIFGTELPPEIWLTLPPRLKIAVFTWYGA 77
           IR+VKL+++SELRIE+   SPLRLRL+ G AEIFG ELP E+W+T PP +  AVFTWYGA
Sbjct: 6   IRRVKLEKQSELRIELQPTSPLRLRLLDGKAEIFGYELPHEVWITFPPLMTFAVFTWYGA 65

Query: 78  TLEMDGATETDYTADETPMIGYVNAHAILEGRRSRARASSSDDSGSTQGPRVIVVGPTDS 137
           T+E+DG T  +Y + ETPM+ Y+  H  L+ +R R  +S+ D + S +GPRVI+VG  DS
Sbjct: 66  TIEIDGITGNEYISCETPMVNYLGLHNSLQVQRHRVTSSTRDSASSQEGPRVIIVGDIDS 125

Query: 138 GKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIPGCIAATPIELPIDPVDGIPLEMPLV 197
           GKSTL++MLL+WA K GWKPTFVDL++GQ SITIPG IAA PI++ +DPV+G PL+  L+
Sbjct: 126 GKSTLAKMLLNWAVKDGWKPTFVDLNVGQSSITIPGTIAAAPIKMLVDPVEGFPLDKALI 185

Query: 198 YFYGHTTPSNNVDLYKVLVKELAEVLERQFTGNAESRAAGMVINTMGWIEGIGYELLLHA 257
           +++G T PS N+ LY+ LV+ELA  L+ +F+ NAESRA+GMVI+TMG+I   GY LLLHA
Sbjct: 186 HYFGLTNPSVNLRLYRTLVEELARELKEEFSANAESRASGMVIDTMGFIVREGYALLLHA 245

Query: 258 IDTLNANVVLVLGQ-EKLWSMLKDVLKNKPNVDVVKLQKSGGVVSRNAKFRQKARSYRIR 317
           I T NA++V+V+GQ EKL   LK  LK K N+ V+ L+KS GV SR++ FR+  R+  I+
Sbjct: 246 IRTFNASLVIVVGQEEKLVYDLKKNLKFKKNLQVLNLEKSEGVFSRSSDFRKTLRNSNIQ 305

Query: 318 EYFYGPANDLSPHSNIANFNDLFIYRIGGGPQAPRSALPIGAEPAADPTRLVPVNINRDL 377
            YFYG  NDL+ ++    F+D+ +YRIG       S      +   DP ++  V I+  L
Sbjct: 306 NYFYGVTNDLTVYTKTVKFSDVQVYRIG---DFRVSGSTSAHQRGNDPLKITLVTIDEHL 365

Query: 378 LHLVLAVSFAKEPDEIMSSNVAGFVYVTDIDIQRKKLTYLAPSAGELPGKYLIMGTLTW 436
           ++ VLA+S+A +PD+I+SS VAGFV + ++DI  +++TY++PSA ELP K LI+GTLTW
Sbjct: 366 VNKVLAISYAIKPDQIISSIVAGFVCIKNVDISEERITYVSPSAAELPSKILILGTLTW 421

[Close]

BLAST of MS003202 vs. TAIR 10
Match: AT5G11010.1 (Pre-mRNA cleavage complex II protein family )

HSP 1 Score: 74.3 bits (181), Expect = 2.7e-13
Identity = 49/150 (32.67%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 113 ARASSSDDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIP 172
           + A+SS    S Q    +V GP +SGKST SR L+    ++  +  ++D D+GQ   T P
Sbjct: 16  SNAASSVSCSSLQPVIALVCGPKNSGKSTFSRNLVEVLLQRYKRVAYLDTDVGQPEFTAP 75

Query: 173 GCIAATPIELPIDPVD-GIP-LEMP-LVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTG 232
           G ++ T ++  I   D  +P ++ P   +FYG  +   +   Y   V  L +  +  F  
Sbjct: 76  GFLSLTIVDKSILESDWTVPCVKTPERCFFYGDVSSKRDPKAYLRYVYTLFDYYQLHFCK 135

Query: 233 NAESRA-AGMVINTMGWIEGIGYELLLHAI 259
           ++E++    +VINT GW++GIGYELL+  +
Sbjct: 136 SSENKTELPLVINTPGWVKGIGYELLVDVL 165

[Close]

BLAST of MS003202 vs. TAIR 10
Match: AT5G11010.2 (Pre-mRNA cleavage complex II protein family )

HSP 1 Score: 74.3 bits (181), Expect = 2.7e-13
Identity = 49/150 (32.67%), Postives = 81/150 (54.00%), Query Frame = 0


Query: 113 ARASSSDDSGSTQGPRVIVVGPTDSGKSTLSRMLLSWAAKQGWKPTFVDLDIGQGSITIP 172
           + A+SS    S Q    +V GP +SGKST SR L+    ++  +  ++D D+GQ   T P
Sbjct: 16  SNAASSVSCSSLQPVIALVCGPKNSGKSTFSRNLVEVLLQRYKRVAYLDTDVGQPEFTAP 75

Query: 173 GCIAATPIELPIDPVD-GIP-LEMP-LVYFYGHTTPSNNVDLYKVLVKELAEVLERQFTG 232
           G ++ T ++  I   D  +P ++ P   +FYG  +   +   Y   V  L +  +  F  
Sbjct: 76  GFLSLTIVDKSILESDWTVPCVKTPERCFFYGDVSSKRDPKAYLRYVYTLFDYYQLHFCK 135

Query: 233 NAESRA-AGMVINTMGWIEGIGYELLLHAI 259
           ++E++    +VINT GW++GIGYELL+  +
Sbjct: 136 SSENKTELPLVINTPGWVKGIGYELLVDVL 165

The following BLAST results are available for this feature:

BLAST of MS003202 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022134389.1	3.2e-250	99.77	protein CLP1 homolog [Momordica charantia]	[more]
XP_023533688.1	6.4e-243	95.66	protein CLP1 homolog [Cucurbita pepo subsp. pepo]	[more]
XP_038889139.1	6.4e-243	96.12	protein CLP1 homolog isoform X1 [Benincasa hispida]	[more]
XP_022921936.1	3.2e-242	95.21	protein CLP1 homolog [Cucurbita moschata] >KAG6602481.1 Protein CLP1-like protei...	[more]
XP_022990827.1	5.4e-242	95.43	protein CLP1 homolog [Cucurbita maxima]	[more]

BLAST of MS003202 vs. ExPASy Swiss-Prot


Match Name	E-value	Identity	Description
Q9SR06	1.7e-182	69.59	Protein CLP1 homolog OS=Arabidopsis thaliana OX=3702 GN=CLPS3 PE=1 SV=1	[more]
Q9FLE2	8.1e-124	53.22	Protein CLP1 homolog 5 OS=Arabidopsis thaliana OX=3702 GN=CLPS5 PE=1 SV=1	[more]
Q54N48	1.7e-97	44.68	Protein CLP1 homolog OS=Dictyostelium discoideum OX=44689 GN=clp1 PE=3 SV=1	[more]
Q5ZJL4	2.3e-94	42.29	Polyribonucleotide 5'-hydroxyl-kinase Clp1 OS=Gallus gallus OX=9031 GN=CLP1 PE=2...	[more]
A7RG82	1.9e-93	41.81	Protein CLP1 homolog OS=Nematostella vectensis OX=45351 GN=v1g236308 PE=3 SV=1	[more]

BLAST of MS003202 vs. ExPASy TrEMBL


Match Name	E-value	Identity	Description
A0A6J1BYM6	1.5e-250	99.77	Protein CLP1 homolog OS=Momordica charantia OX=3673 GN=LOC111006662 PE=3 SV=1	[more]
A0A6J1E2R2	1.5e-242	95.21	Protein CLP1 homolog OS=Cucurbita moschata OX=3662 GN=LOC111430040 PE=3 SV=1	[more]
A0A6J1JJY4	2.6e-242	95.43	Protein CLP1 homolog OS=Cucurbita maxima OX=3661 GN=LOC111487604 PE=3 SV=1	[more]
A0A0A0KU52	3.4e-242	95.66	Protein CLP1 homolog OS=Cucumis sativus OX=3659 GN=Csa_5G635390 PE=3 SV=1	[more]
A0A5A7TDF1	7.6e-242	95.21	Protein CLP1 homolog OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold892...	[more]

BLAST of MS003202 vs. TAIR 10


Match Name	E-value	Identity	Description
AT3G04680.1	1.2e-183	69.59	CLP-similar protein 3	[more]
AT3G04680.2	1.2e-183	69.59	CLP-similar protein 3	[more]
AT5G39930.1	5.8e-125	53.22	CLP1-similar protein 5	[more]
AT5G11010.1	2.7e-13	32.67	Pre-mRNA cleavage complex II protein family	[more]
AT5G11010.2	2.7e-13	32.67	Pre-mRNA cleavage complex II protein family	[more]

InterPro

Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR038238	Clp1, C-terminal domain superfamily	GENE3D	2.40.30.330		coord: 328..438 e-value: 2.1E-34 score: 120.0
IPR038239	Clp1, N-terminal beta-sandwich domain superfamily	GENE3D	2.60.120.1030	Clp1, DNA binding domain	coord: 12..94 e-value: 1.1E-27 score: 97.7
IPR010655	Pre-mRNA cleavage complex subunit Clp1, C-terminal	PFAM	PF06807	Clp1	coord: 326..437 e-value: 1.4E-32 score: 112.5
IPR027417	P-loop containing nucleoside triphosphate hydrolase	GENE3D	3.40.50.300		coord: 95..326 e-value: 1.0E-87 score: 295.4
IPR027417	P-loop containing nucleoside triphosphate hydrolase	SUPERFAMILY	52540	P-loop containing nucleoside triphosphate hydrolases	coord: 127..193
IPR032324	Clp1, N-terminal beta-sandwich domain	PFAM	PF16573	CLP1_N	coord: 22..113 e-value: 1.0E-28 score: 99.4
IPR032319	Polyribonucleotide 5'-hydroxyl-kinase Clp1, P-loop domain	PFAM	PF16575	CLP1_P	coord: 133..321 e-value: 7.6E-69 score: 231.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 110..138
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 1..21
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 117..138
None	No IPR available	PANTHER	PTHR12755:SF6	POLYRIBONUCLEOTIDE 5'-HYDROXYL-KINASE CLP1	coord: 15..437
IPR045116	Polyribonucleotide 5-hydroxyl-kinase Clp1/Grc3	PANTHER	PTHR12755	CLEAVAGE/POLYADENYLATION FACTOR IA SUBUNIT CLP1P	coord: 15..437
IPR028606	Polyribonucleotide 5-hydroxyl-kinase Clp1	HAMAP	MF_03035	Clp1	coord: 18..437 score: 30.955761

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
MS003202.1	MS003202.1	mRNA

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0031124	mRNA 3'-end processing
biological_process	GO:0006396	RNA processing
cellular_component	GO:0005849	mRNA cleavage factor complex
molecular_function	GO:0051731	polynucleotide 5'-hydroxyl-kinase activity