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MS003198 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATACATTTAAAAATTTTCACAGGTGCATTGATGATGATTCCTCAAAGAGCCAATGCAAAACAATGTTACGAGAAGTTGTATGGATTTATATGCGAACCTCTTGAATGTCGTCAAAAATGCAGAGAGAAGCACCCTAATTCATCATTTGAATGCGTTCCAACTCCTAATAGCTCCTTTAATTATAAGCTATGCTATTGCTTCTTTGATTGTGCAAGAAAT ATACATTTAAAAATTTTCACAGGTGCATTGATGATGATTCCTCAAAGAGCCAATGCAAAACAATGTTACGAGAAGTTGTATGGATTTATATGCGAACCTCTTGAATGTCGTCAAAAATGCAGAGAGAAGCACCCTAATTCATCATTTGAATGCGTTCCAACTCCTAATAGCTCCTTTAATTATAAGCTATGCTATTGCTTCTTTGATTGTGCAAGAAAT ATACATTTAAAAATTTTCACAGGTGCATTGATGATGATTCCTCAAAGAGCCAATGCAAAACAATGTTACGAGAAGTTGTATGGATTTATATGCGAACCTCTTGAATGTCGTCAAAAATGCAGAGAGAAGCACCCTAATTCATCATTTGAATGCGTTCCAACTCCTAATAGCTCCTTTAATTATAAGCTATGCTATTGCTTCTTTGATTGTGCAAGAAAT IHLKIFTGALMMIPQRANAKQCYEKLYGFICEPLECRQKCREKHPNSSFECVPTPNSSFNYKLCYCFFDCARN Homology
BLAST of MS003198 vs. NCBI nr
Match: XP_022990690.1 (putative defensin-like protein 129 [Cucurbita maxima]) HSP 1 Score: 69.7 bits (169), Expect = 1.2e-08 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of MS003198 vs. NCBI nr
Match: XP_022923678.1 (putative defensin-like protein 129 [Cucurbita moschata]) HSP 1 Score: 68.6 bits (166), Expect = 2.6e-08 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of MS003198 vs. NCBI nr
Match: KGN52439.1 (hypothetical protein Csa_009048 [Cucumis sativus]) HSP 1 Score: 65.9 bits (159), Expect = 1.7e-07 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of MS003198 vs. NCBI nr
Match: KAA0042348.1 (S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa] >TYK15471.1 S locus-related glycoprotein 1 binding pollen coat [Cucumis melo var. makuwa]) HSP 1 Score: 62.4 bits (150), Expect = 1.9e-06 Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of MS003198 vs. NCBI nr
Match: KGN64987.1 (hypothetical protein Csa_022748 [Cucumis sativus]) HSP 1 Score: 57.8 bits (138), Expect = 4.6e-05 Identity = 28/66 (42.42%), Postives = 37/66 (56.06%), Query Frame = 0
BLAST of MS003198 vs. ExPASy TrEMBL
Match: A0A6J1JQS7 (putative defensin-like protein 129 OS=Cucurbita maxima OX=3661 GN=LOC111487504 PE=3 SV=1) HSP 1 Score: 69.7 bits (169), Expect = 5.7e-09 Identity = 31/73 (42.47%), Postives = 44/73 (60.27%), Query Frame = 0
BLAST of MS003198 vs. ExPASy TrEMBL
Match: A0A6J1EAA9 (putative defensin-like protein 129 OS=Cucurbita moschata OX=3662 GN=LOC111431316 PE=3 SV=1) HSP 1 Score: 68.6 bits (166), Expect = 1.3e-08 Identity = 30/73 (41.10%), Postives = 43/73 (58.90%), Query Frame = 0
BLAST of MS003198 vs. ExPASy TrEMBL
Match: A0A0A0KU45 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G634350 PE=3 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 8.2e-08 Identity = 31/63 (49.21%), Postives = 40/63 (63.49%), Query Frame = 0
BLAST of MS003198 vs. ExPASy TrEMBL
Match: A0A5A7THQ7 (S locus-related glycoprotein 1 binding pollen coat OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold477G00450 PE=3 SV=1) HSP 1 Score: 62.4 bits (150), Expect = 9.1e-07 Identity = 28/66 (42.42%), Postives = 43/66 (65.15%), Query Frame = 0
BLAST of MS003198 vs. ExPASy TrEMBL
Match: A0A0A0L2R3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G576870 PE=3 SV=1) HSP 1 Score: 57.8 bits (138), Expect = 2.2e-05 Identity = 30/67 (44.78%), Postives = 38/67 (56.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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