Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGTGGAAGGCAGAGGAAAACTACAGGGAAACGAAGCAAGGAGAGGTTGAAGATAAGGATTCCATGGGCACAGTTTTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAACGAGCTGTGGTTCTGTTCTTGGTAGAGCAATGGCGGGTCTGGGTTTTTTTGGTCCTGAATCTCATTGTTGTAGCAATTTTCTTCACGTCCAGTCCCTCCAATTACAGGGAAAGCCAAGACCCAAGTGTTGGAAAAAAGCAGAAGAAGATCAAAGACAGAGAATGCAAAGTGGCTGAAGAAAAAGTAGAAAAAGTTGAGGCCAAACCCCAAGAAATGGATAAAGAAGAGGAAATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGATGCAGATGTTGGGTTGTCAAAGGAGGAGTTGAACGAGAGAGTGGAAGCATTTATTGTTATGTTCAAGCAGCAGCTGATTTTAGATGCAAGAAAAGGGGGAAATAGCCACACCCCATTGAGCTATAATTCT
mRNA sequence
ATGTGGAAGGCAGAGGAAAACTACAGGGAAACGAAGCAAGGAGAGGTTGAAGATAAGGATTCCATGGGCACAGTTTTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAACGAGCTGTGGTTCTGTTCTTGGTAGAGCAATGGCGGGTCTGGGTTTTTTTGGTCCTGAATCTCATTGTTGTAGCAATTTTCTTCACGTCCAGTCCCTCCAATTACAGGGAAAGCCAAGACCCAAGTGTTGGAAAAAAGCAGAAGAAGATCAAAGACAGAGAATGCAAAGTGGCTGAAGAAAAAGTAGAAAAAGTTGAGGCCAAACCCCAAGAAATGGATAAAGAAGAGGAAATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGATGCAGATGTTGGGTTGTCAAAGGAGGAGTTGAACGAGAGAGTGGAAGCATTTATTGTTATGTTCAAGCAGCAGCTGATTTTAGATGCAAGAAAAGGGGGAAATAGCCACACCCCATTGAGCTATAATTCT
Coding sequence (CDS)
ATGTGGAAGGCAGAGGAAAACTACAGGGAAACGAAGCAAGGAGAGGTTGAAGATAAGGATTCCATGGGCACAGTTTTGTTATCAGCAGGAACAGCATTGTTAATGGCAGCTTGTTTGAAACGAGCTGTGGTTCTGTTCTTGGTAGAGCAATGGCGGGTCTGGGTTTTTTTGGTCCTGAATCTCATTGTTGTAGCAATTTTCTTCACGTCCAGTCCCTCCAATTACAGGGAAAGCCAAGACCCAAGTGTTGGAAAAAAGCAGAAGAAGATCAAAGACAGAGAATGCAAAGTGGCTGAAGAAAAAGTAGAAAAAGTTGAGGCCAAACCCCAAGAAATGGATAAAGAAGAGGAAATTGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAAGAGGAGGAGGAGGATGCAGATGTTGGGTTGTCAAAGGAGGAGTTGAACGAGAGAGTGGAAGCATTTATTGTTATGTTCAAGCAGCAGCTGATTTTAGATGCAAGAAAAGGGGGAAATAGCCACACCCCATTGAGCTATAATTCT
Protein sequence
MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLNLIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEIEEEEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS
Homology
BLAST of MS003186 vs. NCBI nr
Match:
XP_022134128.1 (coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia])
HSP 1 Score: 299.3 bits (765), Expect = 2.3e-77
Identity = 176/180 (97.78%), Postives = 176/180 (97.78%), Query Frame = 0
Query: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN
Sbjct: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
Query: 61 LIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEIEE 120
LIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI
Sbjct: 61 LIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI-- 120
Query: 121 EEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 180
EEEE EEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS
Sbjct: 121 -EEEEIEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 177
BLAST of MS003186 vs. NCBI nr
Match:
KAG7016160.1 (hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 216.1 bits (549), Expect = 2.5e-52
Identity = 141/184 (76.63%), Postives = 158/184 (85.87%), Query Frame = 0
Query: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
MW+AEE+YRE+KQ EVEDKDS+GT LLSAGTALLMAACLKRAVVLFLVEQWR+WVFL+LN
Sbjct: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
Query: 61 LIVVAIFFT---SSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKE 120
LI+VAIFFT SSPS+Y ES Q+ + KQKKI++RECK A EKVEK+E K QE +KE
Sbjct: 61 LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEA-EKVEKLEIKHQEREKE 120
Query: 121 EEIEEEEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTP 180
EE EEE EEEEEEEEEEEEE +GLSKEELNERVEAFIVMFK+QLI DAR+GGN TP
Sbjct: 121 EEEEEELPEEEEEEEEEEEEE---IGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTP 180
BLAST of MS003186 vs. NCBI nr
Match:
KAG6578611.1 (hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 213.8 bits (543), Expect = 1.2e-51
Identity = 139/184 (75.54%), Postives = 156/184 (84.78%), Query Frame = 0
Query: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
MW+AEE+YRE+KQ EVEDKDS+GT LLSAGTALLMAACLKRAVVLFLVEQWR+WVFL+LN
Sbjct: 1 MWRAEESYRESKQAEVEDKDSIGTALLSAGTALLMAACLKRAVVLFLVEQWRIWVFLLLN 60
Query: 61 LIVVAIFFT---SSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKE 120
LI+VAIFFT SSPS+Y ES Q+ + KQKKI++RECK A EKVEK+E K QE +KE
Sbjct: 61 LILVAIFFTSSPSSPSSYSESQTQEANAKIKQKKIENRECKEA-EKVEKLEIKHQEREKE 120
Query: 121 EEIEEEEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTP 180
EE EEE EEEEEEEEEEE +GLSKEELNERVEAFIVMFK+QLI DAR+GGN TP
Sbjct: 121 EEEEEELPEEEEEEEEEEE-----IGLSKEELNERVEAFIVMFKKQLISDARRGGNRRTP 178
BLAST of MS003186 vs. NCBI nr
Match:
XP_038890929.1 (uncharacterized protein LOC120080357 [Benincasa hispida])
HSP 1 Score: 201.1 bits (510), Expect = 8.4e-48
Identity = 128/180 (71.11%), Postives = 146/180 (81.11%), Query Frame = 0
Query: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
MW+AEE+YRE KQGEVEDKDS+G VLLSAGTALLMAACLK+AVV+FLVEQWR+WVFLVLN
Sbjct: 1 MWRAEESYRELKQGEVEDKDSIGNVLLSAGTALLMAACLKKAVVMFLVEQWRIWVFLVLN 60
Query: 61 LIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEIEE 120
LI+VAIFFTSSP++Y E+Q+ KQKKIK+RE K EA+ E+ +EEEIEE
Sbjct: 61 LILVAIFFTSSPASYSENQNEEA--KQKKIKNRELK---------EAEKTEIKEEEEIEE 120
Query: 121 EEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 180
EE EEEEEEEEE +GLSKEELNERVEAFIVMFK+QLI DARKG N TP SYN+
Sbjct: 121 EEIEEEEEEEEE-------IGLSKEELNERVEAFIVMFKKQLISDARKGRNRSTPFSYNN 162
BLAST of MS003186 vs. NCBI nr
Match:
XP_023512615.1 (uncharacterized protein LOC111777308 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 185.3 bits (469), Expect = 4.7e-43
Identity = 122/179 (68.16%), Postives = 136/179 (75.98%), Query Frame = 0
Query: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVL-FLVEQWRVWVFLVL 60
MW+AEE RE+KQGEVEDKD + +LSAGT LLMAACLKRAVVL FLVEQWR+WVFL L
Sbjct: 1 MWRAEEGCRESKQGEVEDKDCISRGVLSAGTTLLMAACLKRAVVLFFLVEQWRIWVFLAL 60
Query: 61 NLIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEIE 120
NLI+V IFFTSSP++Y ESQ P KK KKI+ E EKVE+VE K QEMDKEEE E
Sbjct: 61 NLILVTIFFTSSPASYGESQTPEPMKK-KKIRSSE----PEKVEEVEIKQQEMDKEEECE 120
Query: 121 EEEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSY 179
E+EEEEE +GLSKEELNERVEAFIVMFK+QLI DARK G+ TPLSY
Sbjct: 121 EDEEEEE-------------IGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSY 161
BLAST of MS003186 vs. ExPASy TrEMBL
Match:
A0A6J1C149 (coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX=3673 GN=LOC111006473 PE=4 SV=1)
HSP 1 Score: 299.3 bits (765), Expect = 1.1e-77
Identity = 176/180 (97.78%), Postives = 176/180 (97.78%), Query Frame = 0
Query: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN
Sbjct: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVLN 60
Query: 61 LIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEIEE 120
LIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI
Sbjct: 61 LIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEI-- 120
Query: 121 EEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 180
EEEE EEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS
Sbjct: 121 -EEEEIEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYNS 177
BLAST of MS003186 vs. ExPASy TrEMBL
Match:
A0A6J1H605 (uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC111460852 PE=4 SV=1)
HSP 1 Score: 183.0 bits (463), Expect = 1.1e-42
Identity = 122/181 (67.40%), Postives = 136/181 (75.14%), Query Frame = 0
Query: 1 MWKAEENYRETKQGEVEDKDSMGTVLLSAGTALLMAACLKRAVVL-FLVEQWRVWVFLVL 60
MW+AEE RE+KQGEVEDKD +LSAGTALLMAACLKRAVVL FLVEQWR+WVFL L
Sbjct: 1 MWRAEEGCRESKQGEVEDKDCTSRGVLSAGTALLMAACLKRAVVLFFLVEQWRIWVFLAL 60
Query: 61 NLIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEEIE 120
NLI+V IFFTSSP++Y ESQ KK KKI+ E EKVE+VE K QEMDKEEEIE
Sbjct: 61 NLILVTIFFTSSPASYSESQTQEPTKK-KKIRSSE----PEKVEEVEIKQQEMDKEEEIE 120
Query: 121 EEEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLSYN 180
E+EEEE +GLSKEELNERVEAFIVMFK+QLI DARK G+ TPLSY
Sbjct: 121 EDEEEEV-------------IGLSKEELNERVEAFIVMFKKQLISDARKVGSRRTPLSYK 163
BLAST of MS003186 vs. ExPASy TrEMBL
Match:
A0A1S3C9Q4 (ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 SV=1)
HSP 1 Score: 166.8 bits (421), Expect = 8.5e-38
Identity = 118/183 (64.48%), Postives = 142/183 (77.60%), Query Frame = 0
Query: 1 MWKAEENYRETKQ-GEVEDKDSMGTVLLSAGTALLMAACLKRAVVLFLVEQWRVWVFLVL 60
MW+ EE RE KQ GE EDKDS+ LLSAGTALLMA CLK+AVV+FLVEQWR+WVFL L
Sbjct: 1 MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKAVVMFLVEQWRIWVFLAL 60
Query: 61 NLIVVAIFFTSSPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKPQEMDKEEE 120
NLI+VAIFFTS+P+NY E+ Q+ S KQKK ++ E K A+++ +K + K E + +E
Sbjct: 61 NLILVAIFFTSNPANYSETQKQETSGKTKQKKTENIELKEAKKEEDKTKQKKTENREFKE 120
Query: 121 IEEEEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNSHTPLS 180
+EE+E EEEEEEEEEEE +GLSKEELNERVEAFIVMFK+QLI DARKGGN LS
Sbjct: 121 ARKEEDEIEEEEEEEEEEE---IGLSKEELNERVEAFIVMFKKQLISDARKGGNR---LS 177
BLAST of MS003186 vs. ExPASy TrEMBL
Match:
A0A0A0KVE3 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1)
HSP 1 Score: 147.9 bits (372), Expect = 4.1e-32
Identity = 115/187 (61.50%), Postives = 142/187 (75.94%), Query Frame = 0
Query: 1 MWKAEENYRETKQ-GEVEDKDSMGTVLLSAGTALLMAACLKR-AVVLFLVEQWRVWVFLV 60
MW+ EE RE KQ GE EDKDS+ LLSAGTALLMA CLK+ AVV+FLVEQWR+WVFLV
Sbjct: 1 MWRTEEINRELKQGGEFEDKDSIRNALLSAGTALLMATCLKKLAVVMFLVEQWRIWVFLV 60
Query: 61 LNLIVVAIFFTS---SPSNYRES--QDPSVGKKQKKIKDRECKVAEEKVEKVEAKP-QEM 120
LNLI+VAIFFTS +P+NY E+ Q+ S K KKI+ RE + A+++ +K + K +
Sbjct: 61 LNLILVAIFFTSNPANPANYSETQKQETSGKTKLKKIEKRELEEAKKEEDKTKQKKIENR 120
Query: 121 DKEEEIEEEEEEEEEEEEEEEEEEDADVGLSKEELNERVEAFIVMFKQQLILDARKGGNS 180
+ +E I+EE+E +EE+E EEEEEE ++ LSKEELNERVEAFIVMFK+QLI DARKGGN
Sbjct: 121 EIKEAIKEEDEIKEEDEIEEEEEE--EIELSKEELNERVEAFIVMFKKQLISDARKGGNR 180
BLAST of MS003186 vs. ExPASy TrEMBL
Match:
A0A6J1JR04 (uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056 PE=4 SV=1)
HSP 1 Score: 110.9 bits (276), Expect = 5.5e-21
Identity = 92/141 (65.25%), Postives = 105/141 (74.47%), Query Frame = 0
Query: 35 MAACLKRAVVL-FLVEQWRVWVFLVLNLIVVAIFFTSSPSNYRESQDPSVGKKQKKIKDR 94
MAACLKRAVVL FLVEQWR+WVFLVLNLI+V IFFTSSP++Y E+Q KK KKI++
Sbjct: 1 MAACLKRAVVLFFLVEQWRIWVFLVLNLILVTIFFTSSPASYSENQIQEPTKK-KKIRNS 60
Query: 95 ECKVAEEKVEKVEAKPQEMDKEEEIEEEEEEEEEEEEEEEEEEDADVGLSKEELNERVEA 154
E EKVE+VE K QE+ KEEEIEE+EEEEE +EE E + ELNERVEA
Sbjct: 61 E----PEKVEEVEIKQQEIGKEEEIEEDEEEEEIGLSKEELNE-------RVELNERVEA 120
Query: 155 FIVMFKQQLILDARKGGNSHT 175
FIVMFK+QLI DARK GN T
Sbjct: 121 FIVMFKKQLISDARKVGNRRT 129
BLAST of MS003186 vs. TAIR 10
Match:
AT3G28420.1 (Putative membrane lipoprotein )
HSP 1 Score: 49.3 bits (116), Expect = 3.8e-06
Identity = 70/194 (36.08%), Postives = 105/194 (54.12%), Query Frame = 0
Query: 10 ETKQGEVEDKDSMGTVLLSAGTALLMAACLKR-AVVLFLVEQWRVWVFLVLNLIVVAIFF 69
E K+ ++++M T LL+A L M ACLK + V +L+EQWR VFL+LN++++A++F
Sbjct: 2 EMKRDIRVEEENMCTSLLTAVVVLSM-ACLKHFSSVSYLIEQWRSLVFLILNVVLLAVYF 61
Query: 70 TSSPSNYRESQD---------PSVGKKQKKIKDRECKVAEE------------------K 129
TS+ N S D + +K+ KIK ++ +V E K
Sbjct: 62 TSTRPNLGRSHDFKTRRGGRLRMMREKKNKIKKKKTRVVVEPACFDQGFLLVEPKEVIKK 121
Query: 130 VEKVEAKPQEMDKEEEIEEEEEEEEEEEEEEEEEEDADVG-LSKEELNERVEAFIVMFKQ 175
VE + K EE ++ ++E E EE++ + G LS EELNERVEAFI F+Q
Sbjct: 122 CVLVEETKRVCPKFEETVKDCLFHKKEIEYNGEEDEFEPGRLSNEELNERVEAFITTFRQ 181
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134128.1 | 2.3e-77 | 97.78 | coiled-coil domain-containing glutamate-rich protein 1 [Momordica charantia] | [more] |
KAG7016160.1 | 2.5e-52 | 76.63 | hypothetical protein SDJN02_21264, partial [Cucurbita argyrosperma subsp. argyro... | [more] |
KAG6578611.1 | 1.2e-51 | 75.54 | hypothetical protein SDJN03_23059, partial [Cucurbita argyrosperma subsp. sorori... | [more] |
XP_038890929.1 | 8.4e-48 | 71.11 | uncharacterized protein LOC120080357 [Benincasa hispida] | [more] |
XP_023512615.1 | 4.7e-43 | 68.16 | uncharacterized protein LOC111777308 [Cucurbita pepo subsp. pepo] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1C149 | 1.1e-77 | 97.78 | coiled-coil domain-containing glutamate-rich protein 1 OS=Momordica charantia OX... | [more] |
A0A6J1H605 | 1.1e-42 | 67.40 | uncharacterized protein LOC111460852 OS=Cucurbita moschata OX=3662 GN=LOC1114608... | [more] |
A0A1S3C9Q4 | 8.5e-38 | 64.48 | ABC transporter F family member 4 OS=Cucumis melo OX=3656 GN=LOC103498035 PE=4 S... | [more] |
A0A0A0KVE3 | 4.1e-32 | 61.50 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633200 PE=4 SV=1 | [more] |
A0A6J1JR04 | 5.5e-21 | 65.25 | uncharacterized protein LOC111487056 OS=Cucurbita maxima OX=3661 GN=LOC111487056... | [more] |
Match Name | E-value | Identity | Description | |
AT3G28420.1 | 3.8e-06 | 36.08 | Putative membrane lipoprotein | [more] |