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MS003182 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTGTGCTCGATTTTCATGCATGCAAACGCCGTGGGCAAGTTTCTCATGGCATTGGGGTTCATCGAGCCATTGAGGTCGGGGACGGCTTCACCAGCCCTTTAATTTTAGTTCTCACCAGCTGTTTGATGAACAACACCGACTTCACTTTAGGCGCTATTCTTCACCTTCTTTTCACACCAACATCAATAAGGTCGTTCACTAAACTTTTGAATCCGTTAGTATCTGTGGTTTTTAACATTTGATTTTGTTTGATTTTTGTGGGCAATAGAATGTGTATGTCGCGGACATTTCTGGCGTGTTTATTTTTATTTGAATAATTGAAAAGCTACTCTTTCAATATCTGATCTGATTTGTTAGTGTGTTGTGTGAGGGATATTTTGCAGAAGGATATTGTTGGATGAGGACCGCCGGCGAGAATGGGAGTTCAGTATCTGAAGGCAGTTCTCCGACGAGAAGTGGGCTATTTCGATCTCCACGTCACCAGT GTGTGCTCGATTTTCATGCATGCAAACGCCGTGGGCAAGTTTCTCATGGCATTGGGGTTCATCGCCATTGAGGTCGGGGACGGCTTCACCAGCCCTTTAATTTTAGTTCTCACCAGCTGTTTGATGAACAACACCGACTTCACTTTAGGCGCTATTCTTCACCTTCTTTTCACACCAACATCAATAAGGTCGTTCACTAAACTTTTGAATCCTGTGTTGTGTGAGGGATATTTTGCAGAAGGATATTGTTGGATGAGGACCGCCGCGAGAATGGGAGTTCAGTATCTGAAGGCAGTTCTCCGACGAGAAGTGGGCTATTTCGATCTCCACGTCACCAGT GTGTGCTCGATTTTCATGCATGCAAACGCCGTGGGCAAGTTTCTCATGGCATTGGGGTTCATCGCCATTGAGGTCGGGGACGGCTTCACCAGCCCTTTAATTTTAGTTCTCACCAGCTGTTTGATGAACAACACCGACTTCACTTTAGGCGCTATTCTTCACCTTCTTTTCACACCAACATCAATAAGGTCGTTCACTAAACTTTTGAATCCTGTGTTGTGTGAGGGATATTTTGCAGAAGGATATTGTTGGATGAGGACCGCCGCGAGAATGGGAGTTCAGTATCTGAAGGCAGTTCTCCGACGAGAAGTGGGCTATTTCGATCTCCACGTCACCAGT VCSIFMHANAVGKFLMALGFIAIEVGDGFTSPLILVLTSCLMNNTDFTLGAILHLLFTPTSIRSFTKLLNPVLCEGYFAEGYCWMRTAARMGVQYLKAVLRREVGYFDLHVTS Homology
BLAST of MS003182 vs. NCBI nr
Match: XP_004142341.1 (ABC transporter B family member 15 [Cucumis sativus] >KGN52419.1 hypothetical protein Csa_008385 [Cucumis sativus]) HSP 1 Score: 111.7 bits (278), Expect = 4.2e-21 Identity = 67/120 (55.83%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of MS003182 vs. NCBI nr
Match: KAA0037428.1 (ABC transporter B family member 15-like [Cucumis melo var. makuwa]) HSP 1 Score: 108.6 bits (270), Expect = 3.5e-20 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of MS003182 vs. NCBI nr
Match: XP_008458712.1 (PREDICTED: ABC transporter B family member 15-like [Cucumis melo]) HSP 1 Score: 108.6 bits (270), Expect = 3.5e-20 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of MS003182 vs. NCBI nr
Match: XP_022964967.1 (ABC transporter B family member 15-like [Cucurbita moschata]) HSP 1 Score: 107.8 bits (268), Expect = 6.0e-20 Identity = 67/123 (54.47%), Postives = 82/123 (66.67%), Query Frame = 0
BLAST of MS003182 vs. NCBI nr
Match: XP_023517420.1 (ABC transporter B family member 15-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107.8 bits (268), Expect = 6.0e-20 Identity = 65/120 (54.17%), Postives = 79/120 (65.83%), Query Frame = 0
BLAST of MS003182 vs. ExPASy Swiss-Prot
Match: Q9LHD1 (ABC transporter B family member 15 OS=Arabidopsis thaliana OX=3702 GN=ABCB15 PE=3 SV=1) HSP 1 Score: 93.6 bits (231), Expect = 1.5e-18 Identity = 58/120 (48.33%), Postives = 74/120 (61.67%), Query Frame = 0
BLAST of MS003182 vs. ExPASy Swiss-Prot
Match: Q9LSJ2 (ABC transporter B family member 22 OS=Arabidopsis thaliana OX=3702 GN=ABCB22 PE=3 SV=2) HSP 1 Score: 90.1 bits (222), Expect = 1.7e-17 Identity = 55/120 (45.83%), Postives = 72/120 (60.00%), Query Frame = 0
BLAST of MS003182 vs. ExPASy Swiss-Prot
Match: Q9LSJ5 (ABC transporter B family member 18 OS=Arabidopsis thaliana OX=3702 GN=ABCB18 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 1.1e-16 Identity = 55/118 (46.61%), Postives = 70/118 (59.32%), Query Frame = 0
BLAST of MS003182 vs. ExPASy Swiss-Prot
Match: Q9LSJ6 (ABC transporter B family member 17 OS=Arabidopsis thaliana OX=3702 GN=ABCB17 PE=3 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 1.4e-16 Identity = 56/118 (47.46%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of MS003182 vs. ExPASy Swiss-Prot
Match: Q9LSJ8 (ABC transporter B family member 16 OS=Arabidopsis thaliana OX=3702 GN=ABCB16 PE=2 SV=1) HSP 1 Score: 83.6 bits (205), Expect = 1.6e-15 Identity = 54/118 (45.76%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of MS003182 vs. ExPASy TrEMBL
Match: A0A0A0KU14 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G633170 PE=4 SV=1) HSP 1 Score: 111.7 bits (278), Expect = 2.0e-21 Identity = 67/120 (55.83%), Postives = 81/120 (67.50%), Query Frame = 0
BLAST of MS003182 vs. ExPASy TrEMBL
Match: A0A5A7T3R5 (ABC transporter B family member 15-like OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00110 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.7e-20 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of MS003182 vs. ExPASy TrEMBL
Match: A0A1S3C8H4 (ABC transporter B family member 15-like OS=Cucumis melo OX=3656 GN=LOC103498038 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.7e-20 Identity = 66/120 (55.00%), Postives = 78/120 (65.00%), Query Frame = 0
BLAST of MS003182 vs. ExPASy TrEMBL
Match: A0A6J1HJ31 (ABC transporter B family member 15-like OS=Cucurbita moschata OX=3662 GN=LOC111464915 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.9e-20 Identity = 67/123 (54.47%), Postives = 82/123 (66.67%), Query Frame = 0
BLAST of MS003182 vs. ExPASy TrEMBL
Match: A0A6J1BWU3 (ABC transporter B family member 15-like OS=Momordica charantia OX=3673 GN=LOC111006245 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 3.8e-20 Identity = 67/124 (54.03%), Postives = 81/124 (65.32%), Query Frame = 0
BLAST of MS003182 vs. TAIR 10
Match: AT3G28345.1 (ABC transporter family protein ) HSP 1 Score: 93.6 bits (231), Expect = 1.1e-19 Identity = 58/120 (48.33%), Postives = 74/120 (61.67%), Query Frame = 0
BLAST of MS003182 vs. TAIR 10
Match: AT3G28390.1 (P-glycoprotein 18 ) HSP 1 Score: 87.4 bits (215), Expect = 7.9e-18 Identity = 55/118 (46.61%), Postives = 70/118 (59.32%), Query Frame = 0
BLAST of MS003182 vs. TAIR 10
Match: AT3G28380.1 (P-glycoprotein 17 ) HSP 1 Score: 87.0 bits (214), Expect = 1.0e-17 Identity = 56/118 (47.46%), Postives = 73/118 (61.86%), Query Frame = 0
BLAST of MS003182 vs. TAIR 10
Match: AT3G28360.1 (P-glycoprotein 16 ) HSP 1 Score: 83.6 bits (205), Expect = 1.1e-16 Identity = 54/118 (45.76%), Postives = 71/118 (60.17%), Query Frame = 0
BLAST of MS003182 vs. TAIR 10
Match: AT3G28415.1 (ABC transporter family protein ) HSP 1 Score: 74.3 bits (181), Expect = 6.9e-14 Identity = 48/116 (41.38%), Postives = 66/116 (56.90%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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