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MS003181 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TGGACGGTGGGGGCTCGCCCAAATTGTCACGATGTGATGTCGGTGGCAGTGCATGAGATTGGGCATCTTCTTGGGCTCGGCCACAGCGGCGCCGAGGAAGCCATCATGTGGCCATACATACGCCCCAACGCTGTCAAGGGCTTGTTTCAAGACGATGTTGCTGGAATCAAGGCTTTGTATGGATTGCCT TGGACGGTGGGGGCTCGCCCAAATTGTCACGATGTGATGTCGGTGGCAGTGCATGAGATTGGGCATCTTCTTGGGCTCGGCCACAGCGGCGCCGAGGAAGCCATCATGTGGCCATACATACGCCCCAACGCTGTCAAGGGCTTGTTTCAAGACGATGTTGCTGGAATCAAGGCTTTGTATGGATTGCCT TGGACGGTGGGGGCTCGCCCAAATTGTCACGATGTGATGTCGGTGGCAGTGCATGAGATTGGGCATCTTCTTGGGCTCGGCCACAGCGGCGCCGAGGAAGCCATCATGTGGCCATACATACGCCCCAACGCTGTCAAGGGCTTGTTTCAAGACGATGTTGCTGGAATCAAGGCTTTGTATGGATTGCCT WTVGARPNCHDVMSVAVHEIGHLLGLGHSGAEEAIMWPYIRPNAVKGLFQDDVAGIKALYGLP Homology
BLAST of MS003181 vs. NCBI nr
Match: XP_022133610.1 (metalloendoproteinase 1-like [Momordica charantia]) HSP 1 Score: 133.3 bits (334), Expect = 7.5e-28 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of MS003181 vs. NCBI nr
Match: XP_022133608.1 (matrix metalloproteinase-9-like [Momordica charantia]) HSP 1 Score: 96.3 bits (238), Expect = 1.0e-16 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of MS003181 vs. NCBI nr
Match: XP_030973479.1 (metalloendoproteinase 2-MMP-like [Quercus lobata]) HSP 1 Score: 91.3 bits (225), Expect = 3.3e-15 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of MS003181 vs. NCBI nr
Match: KAF3972001.1 (hypothetical protein CMV_004447 [Castanea mollissima]) HSP 1 Score: 91.3 bits (225), Expect = 3.3e-15 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of MS003181 vs. NCBI nr
Match: XP_030973585.1 (metalloendoproteinase 2-MMP-like [Quercus lobata]) HSP 1 Score: 91.3 bits (225), Expect = 3.3e-15 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of MS003181 vs. ExPASy Swiss-Prot
Match: O23507 (Metalloendoproteinase 1-MMP OS=Arabidopsis thaliana OX=3702 GN=1MMP PE=1 SV=1) HSP 1 Score: 67.0 bits (162), Expect = 8.6e-11 Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of MS003181 vs. ExPASy Swiss-Prot
Match: P29136 (Metalloendoproteinase 1 OS=Glycine max OX=3847 PE=1 SV=2) HSP 1 Score: 66.6 bits (161), Expect = 1.1e-10 Identity = 33/53 (62.26%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of MS003181 vs. ExPASy Swiss-Prot
Match: Q8GWW6 (Metalloendoproteinase 4-MMP OS=Arabidopsis thaliana OX=3702 GN=4MMP PE=1 SV=1) HSP 1 Score: 65.9 bits (159), Expect = 1.9e-10 Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MS003181 vs. ExPASy Swiss-Prot
Match: O04529 (Metalloendoproteinase 2-MMP OS=Arabidopsis thaliana OX=3702 GN=2MMP PE=1 SV=1) HSP 1 Score: 64.7 bits (156), Expect = 4.3e-10 Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of MS003181 vs. ExPASy Swiss-Prot
Match: Q5XF51 (Metalloendoproteinase 3-MMP OS=Arabidopsis thaliana OX=3702 GN=3MMP PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 9.6e-10 Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of MS003181 vs. ExPASy TrEMBL
Match: A0A6J1BVR3 (metalloendoproteinase 1-like OS=Momordica charantia OX=3673 GN=LOC111006149 PE=3 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 3.6e-28 Identity = 60/63 (95.24%), Postives = 61/63 (96.83%), Query Frame = 0
BLAST of MS003181 vs. ExPASy TrEMBL
Match: A0A6J1BZL4 (matrix metalloproteinase-9-like OS=Momordica charantia OX=3673 GN=LOC111006147 PE=3 SV=1) HSP 1 Score: 96.3 bits (238), Expect = 4.9e-17 Identity = 41/63 (65.08%), Postives = 50/63 (79.37%), Query Frame = 0
BLAST of MS003181 vs. ExPASy TrEMBL
Match: A0A7N2LXS1 (ZnMc domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of MS003181 vs. ExPASy TrEMBL
Match: A0A7N2LXL1 (ZnMc domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of MS003181 vs. ExPASy TrEMBL
Match: A0A7N2LW22 (ZnMc domain-containing protein OS=Quercus lobata OX=97700 PE=3 SV=1) HSP 1 Score: 91.3 bits (225), Expect = 1.6e-15 Identity = 39/60 (65.00%), Postives = 46/60 (76.67%), Query Frame = 0
BLAST of MS003181 vs. TAIR 10
Match: AT4G16640.1 (Matrixin family protein ) HSP 1 Score: 67.0 bits (162), Expect = 6.1e-12 Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of MS003181 vs. TAIR 10
Match: AT2G45040.1 (Matrixin family protein ) HSP 1 Score: 65.9 bits (159), Expect = 1.4e-11 Identity = 29/52 (55.77%), Postives = 40/52 (76.92%), Query Frame = 0
BLAST of MS003181 vs. TAIR 10
Match: AT1G70170.1 (matrix metalloproteinase ) HSP 1 Score: 64.7 bits (156), Expect = 3.0e-11 Identity = 33/52 (63.46%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of MS003181 vs. TAIR 10
Match: AT1G24140.1 (Matrixin family protein ) HSP 1 Score: 63.5 bits (153), Expect = 6.8e-11 Identity = 32/52 (61.54%), Postives = 37/52 (71.15%), Query Frame = 0
BLAST of MS003181 vs. TAIR 10
Match: AT1G59970.1 (Matrixin family protein ) HSP 1 Score: 63.2 bits (152), Expect = 8.9e-11 Identity = 32/52 (61.54%), Postives = 38/52 (73.08%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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