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MS003168 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCCACTGGCATCTTCACAGGTCTGTTTTACTATCTGTTTTTTGTGTATTTGGCATCTCCTTTTGTTGGGTTGCACAATTTCGTACAGGGTCGGTCGCTACCAAGTTCAAAACCCGACCCGGATAATGCCGCGGCCACTGCTCGCTGGTTGGTATCTCAGAATTCATGGGGAATCTTGAGGTATAATTCTGTTTACTTCATTCTTTCCTGATATCCCAATCGGGGGCTTCAGGCTTTTGAATCGAATTTATTCGGGTTGATCAATTGAAACTTCGTTTTTGATCTTCATCAAAGAAAGGGGGTAGTTAATTAAGAGGAAAATAGCGTTTTCTTAGCTTGGCTAGGGATATTTGCTCGCTGTTGTTTAAATTTGCAAGACTTTTTCATTGTTTTTTTATGTGTTTTCTGCAGTACCATCTCAAGCGAATTTGGGGGAGCGCCATTTGGGTAAGCATTTCTTAATCATACAGCTGCATTGCCGGATGTAAGATCAAAAATACTGTGTTGTTCAAGTTCTTCTGAATATGTTTTGATATTAACTCAATAAGTCAACTTGGTTTCGGATCTAAGCGTTTCTGAAATCATTTAAACAAATTCGAAAGTATGCAACCATCATTTAATTGGTCATGTTTTCTTGCTTGAATCTGCTTCTAATGTGGTTGATCCACTGTATTTTGATTGTTTTGGTGTGTGTGGAACTGCTTCAAAATCAACCAAAATTCTCTTTATATATATCTCTGCAATAGTACGATATTATCCATGTTGATCCTATGTGGGACTATGTTTGCATCTCCAGGAGAATTTAGTTCTAATTTCATGTTGATTTCAGTGATTCTCCATTGGAACTTTCTTTGTGATTTTAAAATCGCATAGATTGGTTGCTGATTTCTTTACAAGAAACTAACACCCTTCCACCATCATATTGTTAAATTTCTTGAGCATTACATTTAGAGTTCTGTACATTCTTGTTGTTCTTGTTTGTTTACCTTGCCTTTCTATTGTTTTGCCTCGGTCATCTCCTCTTGCATTTAGAACTAATCACTCTCCTCTGATAACTATGCGCCCAAATCTCACTCTAATATTTCTGATCTGAACTACTTATCTATTGATTACAACCCAAACTTAACAAACATGCAATTGAAAATAACTTGAGAAAGGTACTTATAAGAAGTAAAGAAGTATATACAAAGATTAGTGGTTTGCTATCGAGCTAATATTTGTCTCCTACAGGAATGTGGTTTCGTTTAGTGACGGGCCACCCAGAAAAGGTCAAGGCACGCCGTATTTTTACTTGACTACTCTTGACCCAACTGCAAGATACGCAATCTCAGATGAGAGGGCTTCATTTACACTCAGCGAGTACCCTATTGGAACTTGTGGCAAGGTAGACCCAGAAAACCCAACTTGTGCGAAAATTACGTTGATTGGAAAGGTAAACTTTTTGGTTTTACGTTCTCTGACCCGTCTCGTGTCCTAGCTGGTCATCCTGTATAACTGAATTCACTGTTTGGGCTGCAGCTGAAGCAGCTAGAGTCTAATACGAAGGAAGCAGAGTTTGCTAGAACTTCCTTGTTCTCAAAGCATGCAGAGATGAAGGGTTAGTAAACTCAAACTTAAACTTATATCTCCTTTTTCATCAACATTACATTTATCTATATTTCTTTTTATGTTCATGACAGGTTGGCCTACAGGTCATGACTTTCGGTTCTTCAAATTAGTAATAGAGAACATATTCTTGATCGATTGGTTCGGTGGACCGAAGCCTCTCACCGTCGATCAATATCTCCATTCAAAACTG ATGGCCACTGGCATCTTCACAGGTCTGTTTTACTATCTGTTTTTTGTGTATTTGGCATCTCCTTTTGTTGGGTTGCACAATTTCGTACAGGGTCGGTCGCTACCAAGTTCAAAACCCGACCCGGATAATGCCGCGGCCACTGCTCGCTGGTTGGTATCTCAGAATTCATGGGGAATCTTGAGGTATAATTCTTGGTTTGCTATCGAGCTAATATTTGTCTCCTACAGGAATGTGGTTTCGTTTAGTGACGGGCCACCCAGAAAAGGTCAAGGCACGCCGTATTTTTACTTGACTACTCTTGACCCAACTGCAAGATACGCAATCTCAGATGAGAGGGCTTCATTTACACTCAGCGAGTACCCTATTGGAACTTGTGGCAAGGTAGACCCAGAAAACCCAACTTGTGCGAAAATTACGTTGATTGGAAAGCTGAAGCAGCTAGAGTCTAATACGAAGGAAGCAGAGTTTGCTAGAACTTCCTTGTTCTCAAAGCATGCAGAGATGAAGGGTTGGCCTACAGGTCATGACTTTCGGTTCTTCAAATTAGTAATAGAGAACATATTCTTGATCGATTGGTTCGGTGGACCGAAGCCTCTCACCGTCGATCAATATCTCCATTCAAAACTG ATGGCCACTGGCATCTTCACAGGTCTGTTTTACTATCTGTTTTTTGTGTATTTGGCATCTCCTTTTGTTGGGTTGCACAATTTCGTACAGGGTCGGTCGCTACCAAGTTCAAAACCCGACCCGGATAATGCCGCGGCCACTGCTCGCTGGTTGGTATCTCAGAATTCATGGGGAATCTTGAGGTATAATTCTTGGTTTGCTATCGAGCTAATATTTGTCTCCTACAGGAATGTGGTTTCGTTTAGTGACGGGCCACCCAGAAAAGGTCAAGGCACGCCGTATTTTTACTTGACTACTCTTGACCCAACTGCAAGATACGCAATCTCAGATGAGAGGGCTTCATTTACACTCAGCGAGTACCCTATTGGAACTTGTGGCAAGGTAGACCCAGAAAACCCAACTTGTGCGAAAATTACGTTGATTGGAAAGCTGAAGCAGCTAGAGTCTAATACGAAGGAAGCAGAGTTTGCTAGAACTTCCTTGTTCTCAAAGCATGCAGAGATGAAGGGTTGGCCTACAGGTCATGACTTTCGGTTCTTCAAATTAGTAATAGAGAACATATTCTTGATCGATTGGTTCGGTGGACCGAAGCCTCTCACCGTCGATCAATATCTCCATTCAAAACTG MATGIFTGLFYYLFFVYLASPFVGLHNFVQGRSLPSSKPDPDNAAATARWLVSQNSWGILRYNSWFAIELIFVSYRNVVSFSDGPPRKGQGTPYFYLTTLDPTARYAISDERASFTLSEYPIGTCGKVDPENPTCAKITLIGKLKQLESNTKEAEFARTSLFSKHAEMKGWPTGHDFRFFKLVIENIFLIDWFGGPKPLTVDQYLHSKL Homology
BLAST of MS003168 vs. NCBI nr
Match: XP_022133442.1 (protein CREG1 isoform X2 [Momordica charantia]) HSP 1 Score: 397.5 bits (1020), Expect = 7.1e-107 Identity = 194/209 (92.82%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of MS003168 vs. NCBI nr
Match: XP_022133441.1 (protein CREG1 isoform X1 [Momordica charantia]) HSP 1 Score: 397.5 bits (1020), Expect = 7.1e-107 Identity = 194/209 (92.82%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of MS003168 vs. NCBI nr
Match: XP_008458719.1 (PREDICTED: protein CREG1 isoform X2 [Cucumis melo] >XP_016902310.1 PREDICTED: protein CREG1 isoform X2 [Cucumis melo]) HSP 1 Score: 345.1 bits (884), Expect = 4.2e-91 Identity = 167/208 (80.29%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of MS003168 vs. NCBI nr
Match: XP_008458718.1 (PREDICTED: protein CREG1 isoform X1 [Cucumis melo]) HSP 1 Score: 345.1 bits (884), Expect = 4.2e-91 Identity = 167/208 (80.29%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of MS003168 vs. NCBI nr
Match: KAA0037469.1 (protein CREG1 isoform X1 [Cucumis melo var. makuwa]) HSP 1 Score: 345.1 bits (884), Expect = 4.2e-91 Identity = 167/208 (80.29%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of MS003168 vs. ExPASy Swiss-Prot
Match: O75629 (Protein CREG1 OS=Homo sapiens OX=9606 GN=CREG1 PE=1 SV=1) HSP 1 Score: 116.3 bits (290), Expect = 4.1e-25 Identity = 63/169 (37.28%), Postives = 97/169 (57.40%), Query Frame = 0
BLAST of MS003168 vs. ExPASy Swiss-Prot
Match: Q8IUH2 (Protein CREG2 OS=Homo sapiens OX=9606 GN=CREG2 PE=1 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 2.0e-24 Identity = 61/177 (34.46%), Postives = 97/177 (54.80%), Query Frame = 0
BLAST of MS003168 vs. ExPASy Swiss-Prot
Match: O88668 (Protein CREG1 OS=Mus musculus OX=10090 GN=Creg1 PE=1 SV=1) HSP 1 Score: 113.6 bits (283), Expect = 2.7e-24 Identity = 63/180 (35.00%), Postives = 96/180 (53.33%), Query Frame = 0
BLAST of MS003168 vs. ExPASy Swiss-Prot
Match: Q8BGC9 (Protein CREG2 OS=Mus musculus OX=10090 GN=Creg2 PE=1 SV=1) HSP 1 Score: 113.2 bits (282), Expect = 3.5e-24 Identity = 59/183 (32.24%), Postives = 98/183 (53.55%), Query Frame = 0
BLAST of MS003168 vs. ExPASy Swiss-Prot
Match: Q5ZJ73 (Protein CREG1 OS=Gallus gallus OX=9031 GN=CREG1 PE=2 SV=1) HSP 1 Score: 109.4 bits (272), Expect = 5.0e-23 Identity = 64/175 (36.57%), Postives = 96/175 (54.86%), Query Frame = 0
BLAST of MS003168 vs. ExPASy TrEMBL
Match: A0A6J1BV44 (protein CREG1 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006015 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.4e-107 Identity = 194/209 (92.82%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of MS003168 vs. ExPASy TrEMBL
Match: A0A6J1BWP4 (protein CREG1 isoform X2 OS=Momordica charantia OX=3673 GN=LOC111006015 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 3.4e-107 Identity = 194/209 (92.82%), Postives = 196/209 (93.78%), Query Frame = 0
BLAST of MS003168 vs. ExPASy TrEMBL
Match: A0A1S4E2V2 (protein CREG1 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498044 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91 Identity = 167/208 (80.29%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of MS003168 vs. ExPASy TrEMBL
Match: A0A5A7T7X4 (Protein CREG1 isoform X1 OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold277G00590 PE=3 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91 Identity = 167/208 (80.29%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of MS003168 vs. ExPASy TrEMBL
Match: A0A1S3C930 (protein CREG1 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498044 PE=4 SV=1) HSP 1 Score: 345.1 bits (884), Expect = 2.0e-91 Identity = 167/208 (80.29%), Postives = 180/208 (86.54%), Query Frame = 0
BLAST of MS003168 vs. TAIR 10
Match: AT2G04690.1 (Pyridoxamine 5'-phosphate oxidase family protein ) HSP 1 Score: 228.4 bits (581), Expect = 5.3e-60 Identity = 113/200 (56.50%), Postives = 143/200 (71.50%), Query Frame = 0
BLAST of MS003168 vs. TAIR 10
Match: AT2G04690.2 (Pyridoxamine 5'-phosphate oxidase family protein ) HSP 1 Score: 228.4 bits (581), Expect = 5.3e-60 Identity = 113/200 (56.50%), Postives = 143/200 (71.50%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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