MS003154 (gene) Bitter gourd (TR) v1

Overview
NameMS003154
Typegene
OrganismMomordica charantia cv. TR (Bitter gourd (TR) v1)
DescriptionNHL domain protein
Locationscaffold234: 772557 .. 773024 (+)
RNA-Seq ExpressionMS003154
SyntenyMS003154
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
GTTCCTCAATCCCAATCCCCCGACCTCTCCTCCGACGAAAATGGCTTCCACCACGCCGACGACCTTCACGAATCGGCCTTCGCCAGCCGCAGCTGCTGCCTCTGGCTCCCTTGCCTGAGGTCCAATCCCTCGCAGGCCGGCTCCATGTGGTGGGAGCGGATCCGCACCTCCGAGCACGACGACGACTGGTGGCTCAGGGGCTGGAGGAGGATCCGAGAATGGTCCGAGATCGTCGCCGGCCCCAAATGGAAGACCTTCATCCGTCAATTCAACAAGAGCCCTCGCAATCGCCAATCCACCTTCCGCTACGACCCTCTCAGCTATTCTCTCAATTTCGATGAAGGTCCCGTCCGCGACGATCCTTTCTACGAAGACCATAAGCGCCGCGATTTCTCCACTCGCTTTGCTGCCATGCCGTCATCCGCTAAATCCTCCATGGACCTCGGCAAGGACGGGCTCTCCTTCATA

mRNA sequence

GTTCCTCAATCCCAATCCCCCGACCTCTCCTCCGACGAAAATGGCTTCCACCACGCCGACGACCTTCACGAATCGGCCTTCGCCAGCCGCAGCTGCTGCCTCTGGCTCCCTTGCCTGAGGTCCAATCCCTCGCAGGCCGGCTCCATGTGGTGGGAGCGGATCCGCACCTCCGAGCACGACGACGACTGGTGGCTCAGGGGCTGGAGGAGGATCCGAGAATGGTCCGAGATCGTCGCCGGCCCCAAATGGAAGACCTTCATCCGTCAATTCAACAAGAGCCCTCGCAATCGCCAATCCACCTTCCGCTACGACCCTCTCAGCTATTCTCTCAATTTCGATGAAGGTCCCGTCCGCGACGATCCTTTCTACGAAGACCATAAGCGCCGCGATTTCTCCACTCGCTTTGCTGCCATGCCGTCATCCGCTAAATCCTCCATGGACCTCGGCAAGGACGGGCTCTCCTTCATA

Coding sequence (CDS)

GTTCCTCAATCCCAATCCCCCGACCTCTCCTCCGACGAAAATGGCTTCCACCACGCCGACGACCTTCACGAATCGGCCTTCGCCAGCCGCAGCTGCTGCCTCTGGCTCCCTTGCCTGAGGTCCAATCCCTCGCAGGCCGGCTCCATGTGGTGGGAGCGGATCCGCACCTCCGAGCACGACGACGACTGGTGGCTCAGGGGCTGGAGGAGGATCCGAGAATGGTCCGAGATCGTCGCCGGCCCCAAATGGAAGACCTTCATCCGTCAATTCAACAAGAGCCCTCGCAATCGCCAATCCACCTTCCGCTACGACCCTCTCAGCTATTCTCTCAATTTCGATGAAGGTCCCGTCCGCGACGATCCTTTCTACGAAGACCATAAGCGCCGCGATTTCTCCACTCGCTTTGCTGCCATGCCGTCATCCGCTAAATCCTCCATGGACCTCGGCAAGGACGGGCTCTCCTTCATA

Protein sequence

VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
Homology
BLAST of MS003154 vs. NCBI nr
Match: XP_022134303.1 (uncharacterized protein LOC111006597 [Momordica charantia])

HSP 1 Score: 333.6 bits (854), Expect = 9.3e-88
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0

Query: 1   VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHD 60
           VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHD
Sbjct: 3   VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHD 62

Query: 61  DDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDD 120
           DDWWLRGWRRIR WSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDD
Sbjct: 63  DDWWLRGWRRIRGWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDD 122

Query: 121 PFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           PFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
Sbjct: 123 PFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 158

BLAST of MS003154 vs. NCBI nr
Match: XP_038889212.1 (uncharacterized protein LOC120079097 [Benincasa hispida])

HSP 1 Score: 256.9 bits (655), Expect = 1.1e-64
Identity = 121/153 (79.08%), Postives = 135/153 (88.24%), Query Frame = 0

Query: 4   SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDW 63
           +QSPDLSSDEN F H DDLH++AF SR CCLWLPCLRSNPSQ+   WWERIR +++DD+W
Sbjct: 4   AQSPDLSSDENAF-HGDDLHDAAFVSRGCCLWLPCLRSNPSQS---WWERIRAADNDDEW 63

Query: 64  WLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 123
           WLRGW+R REWSEI+AGPKWKTFIRQFNK+ RNRQSTFRYDPLSYSLNFDEGP  DDPF 
Sbjct: 64  WLRGWKRFREWSEIIAGPKWKTFIRQFNKN-RNRQSTFRYDPLSYSLNFDEGPAHDDPFS 123

Query: 124 EDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           +D  RRDFSTRFAA+P+SAKSSMDLGKDG  FI
Sbjct: 124 DDLVRRDFSTRFAAIPASAKSSMDLGKDGPPFI 151

BLAST of MS003154 vs. NCBI nr
Match: XP_031741765.1 (uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical protein Csa_008790 [Cucumis sativus])

HSP 1 Score: 252.7 bits (644), Expect = 2.1e-63
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 0

Query: 4   SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDW 63
           + SPDLSSDENGF H DDLH++ FA+R CCLW+PCLRSN SQ+   WWERIR +++DD+W
Sbjct: 4   AHSPDLSSDENGFLHNDDLHDAVFATRGCCLWIPCLRSNSSQS---WWERIRAADNDDEW 63

Query: 64  WLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 123
           WL+GW+R REWSEIVAGPKWKTFIRQF+K+ RNRQSTFRYDPLSYSLNFDEGP  DDPF 
Sbjct: 64  WLKGWKRFREWSEIVAGPKWKTFIRQFHKN-RNRQSTFRYDPLSYSLNFDEGPAHDDPFT 123

Query: 124 EDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           +D  RRDFSTRFAA+P+SAKSSMDLGKD  SFI
Sbjct: 124 DDFVRRDFSTRFAAIPASAKSSMDLGKDSPSFI 152

BLAST of MS003154 vs. NCBI nr
Match: KAG6602448.1 (hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033131.1 hypothetical protein SDJN02_07184, partial [Cucurbita argyrosperma subsp. argyrosperma])

HSP 1 Score: 249.6 bits (636), Expect = 1.8e-62
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 0

Query: 4   SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDW 63
           SQSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS++   WWERIR +++DD+W
Sbjct: 4   SQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKS---WWERIRAADNDDEW 63

Query: 64  WLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 123
           WLRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RYDPLSY+LNFDEGP  DDPF 
Sbjct: 64  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKN-RHRQSTYRYDPLSYALNFDEGPALDDPFS 123

Query: 124 EDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           ED  RRDFS RFA++P+SAKSSMDLGKDG SFI
Sbjct: 124 EDFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

BLAST of MS003154 vs. NCBI nr
Match: XP_022990588.1 (uncharacterized protein LOC111487422 [Cucurbita maxima])

HSP 1 Score: 248.1 bits (632), Expect = 5.2e-62
Identity = 116/153 (75.82%), Postives = 133/153 (86.93%), Query Frame = 0

Query: 4   SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDW 63
           SQSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS+    WWERIR +++DD+W
Sbjct: 4   SQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKT---WWERIRAADNDDEW 63

Query: 64  WLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 123
           WLRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RYDPLSY+LNFD+GP  DDPF 
Sbjct: 64  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKN-RHRQSTYRYDPLSYALNFDDGPALDDPFR 123

Query: 124 EDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           ED  RRDFS RFA++P+SAKSSMDLGKDG SFI
Sbjct: 124 EDFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

BLAST of MS003154 vs. ExPASy TrEMBL
Match: A0A6J1C1N0 (uncharacterized protein LOC111006597 OS=Momordica charantia OX=3673 GN=LOC111006597 PE=4 SV=1)

HSP 1 Score: 333.6 bits (854), Expect = 4.5e-88
Identity = 155/156 (99.36%), Postives = 155/156 (99.36%), Query Frame = 0

Query: 1   VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHD 60
           VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHD
Sbjct: 3   VPQSQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHD 62

Query: 61  DDWWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDD 120
           DDWWLRGWRRIR WSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDD
Sbjct: 63  DDWWLRGWRRIRGWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDD 122

Query: 121 PFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           PFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI
Sbjct: 123 PFYEDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 158

BLAST of MS003154 vs. ExPASy TrEMBL
Match: A0A0A0KRY7 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1)

HSP 1 Score: 252.7 bits (644), Expect = 1.0e-63
Identity = 117/153 (76.47%), Postives = 134/153 (87.58%), Query Frame = 0

Query: 4   SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDW 63
           + SPDLSSDENGF H DDLH++ FA+R CCLW+PCLRSN SQ+   WWERIR +++DD+W
Sbjct: 4   AHSPDLSSDENGFLHNDDLHDAVFATRGCCLWIPCLRSNSSQS---WWERIRAADNDDEW 63

Query: 64  WLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 123
           WL+GW+R REWSEIVAGPKWKTFIRQF+K+ RNRQSTFRYDPLSYSLNFDEGP  DDPF 
Sbjct: 64  WLKGWKRFREWSEIVAGPKWKTFIRQFHKN-RNRQSTFRYDPLSYSLNFDEGPAHDDPFT 123

Query: 124 EDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           +D  RRDFSTRFAA+P+SAKSSMDLGKD  SFI
Sbjct: 124 DDFVRRDFSTRFAAIPASAKSSMDLGKDSPSFI 152

BLAST of MS003154 vs. ExPASy TrEMBL
Match: A0A6J1JTQ3 (uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.5e-62
Identity = 116/153 (75.82%), Postives = 133/153 (86.93%), Query Frame = 0

Query: 4   SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDW 63
           SQSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS+    WWERIR +++DD+W
Sbjct: 4   SQSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKT---WWERIRAADNDDEW 63

Query: 64  WLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 123
           WLRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RYDPLSY+LNFD+GP  DDPF 
Sbjct: 64  WLRGWKRFRDWSEIVAGPKWKTFIRQFHKN-RHRQSTYRYDPLSYALNFDDGPALDDPFR 123

Query: 124 EDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           ED  RRDFS RFA++P+SAKSSMDLGKDG SFI
Sbjct: 124 EDFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

BLAST of MS003154 vs. ExPASy TrEMBL
Match: A0A6J1HFG4 (uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC111462557 PE=4 SV=1)

HSP 1 Score: 248.1 bits (632), Expect = 2.5e-62
Identity = 116/152 (76.32%), Postives = 133/152 (87.50%), Query Frame = 0

Query: 5   QSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWW 64
           QSPDLSSD NGFH  D LHE+AFASR CC WLPCLRSNPS++   WWERIR +++DD+WW
Sbjct: 5   QSPDLSSDVNGFHTDDLLHEAAFASRGCCFWLPCLRSNPSKS---WWERIRAADNDDEWW 64

Query: 65  LRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFYE 124
           LRGW+R R+WSEIVAGPKWKTFIRQF+K+ R+RQST+RYDPLSY+LNFDEGP  DDPF E
Sbjct: 65  LRGWKRFRDWSEIVAGPKWKTFIRQFHKN-RHRQSTYRYDPLSYALNFDEGPALDDPFSE 124

Query: 125 DHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           D  RRDFS RFA++P+SAKSSMDLGKDG SFI
Sbjct: 125 DFMRRDFSMRFASIPASAKSSMDLGKDGPSFI 152

BLAST of MS003154 vs. ExPASy TrEMBL
Match: A0A1S4E267 (uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=4 SV=1)

HSP 1 Score: 236.1 bits (601), Expect = 9.8e-59
Identity = 111/153 (72.55%), Postives = 130/153 (84.97%), Query Frame = 0

Query: 4   SQSPDLSSDENGFHHADDLHESAFASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDW 63
           +QSPD SSDENGF H++DLH++ FA+  CC W+PCLRSN SQ+   WWERIR +++DD+W
Sbjct: 4   AQSPDFSSDENGF-HSNDLHDAVFATHGCCFWIPCLRSNSSQS---WWERIRAADNDDEW 63

Query: 64  WLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 123
           WLRGW+R REWSEIVAGPKWKTFIRQF+K+ RNRQSTFRYDPLSYSLNFDEGP  +D F 
Sbjct: 64  WLRGWKRFREWSEIVAGPKWKTFIRQFHKN-RNRQSTFRYDPLSYSLNFDEGPAHEDSFT 123

Query: 124 EDHKRRDFSTRFAAMPSSAKSSMDLGKDGLSFI 157
           +D  RRDFSTRFAA+P+SAKSSMDL KD  S I
Sbjct: 124 DDFVRRDFSTRFAAIPASAKSSMDLVKDSPSLI 151

BLAST of MS003154 vs. TAIR 10
Match: AT3G01430.1 (BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:AT5G14890.1); Has 98 Blast hits to 98 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 98; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 136.3 bits (342), Expect = 2.0e-32
Identity = 73/163 (44.79%), Postives = 97/163 (59.51%), Query Frame = 0

Query: 20  DDLHESAFASRSCCLWLPCLRSN--PSQAGSMWWERIRT---SEHDDDWWLRGWRRIREW 79
           DD+HE+ FA R CC  +PCL S+   ++ GS+WW+RI T    E D+ WW+RGWRR+REW
Sbjct: 15  DDMHEALFAKRGCCFLMPCLASSQPSTRGGSVWWQRITTVDKLEPDERWWIRGWRRMREW 74

Query: 80  SEIVAGPKWKTFIRQFNKS------------------------PRNRQSTFRYDPLSYSL 139
           SE+VAGP+WKT+IR+F +S                          + Q  FRYD LSYSL
Sbjct: 75  SELVAGPRWKTYIRRFGRSNCCGGGGGRVGNSSGGCGGGAMPNRSSDQGKFRYDQLSYSL 134

Query: 140 NFDEGPVRDDPFYEDHKRRDFSTRFAA--MPSSAKSSMDLGKD 152
           NFD+G  +   F ++   RD+S RFAA  +P S K S+D   D
Sbjct: 135 NFDDGN-QTGHFDDEFPYRDYSMRFAAPSLPVSTKCSIDFDSD 176

BLAST of MS003154 vs. TAIR 10
Match: AT5G14890.1 (NHL domain-containing protein )

HSP 1 Score: 135.2 bits (339), Expect = 4.5e-32
Identity = 72/150 (48.00%), Postives = 93/150 (62.00%), Query Frame = 0

Query: 20  DDLHESAFASRSCCLWLPCLRSNPSQA--GSMWWERIRT---SEHDDDWWLRGWRRIREW 79
           D++HE+ FA R CC  LPCL S+      GS+WW+RIRT    E D+ WW+ GW ++REW
Sbjct: 598 DEMHEAMFAKRGCCFILPCLGSSQPSGPNGSVWWQRIRTVDKLEPDERWWVSGWMKMREW 657

Query: 80  SEIVAGPKWKTFIRQFNKS-----------PRNRQSTFRYDPLSYSLNFDEGPVRDDPFY 139
           SEIVAGPKWKTFIR+F ++            R    +FRYD  SYSLNFD+G  +   F 
Sbjct: 658 SEIVAGPKWKTFIRRFGRNHCCNGGIDGGCNRPEHVSFRYDSWSYSLNFDDGK-QTGHFE 717

Query: 140 EDHKRRDFSTRFAA--MPSSAKSSMDLGKD 152
           ++   RD+S RFAA  +P S K S+D   D
Sbjct: 718 DEFPYRDYSMRFAAPSLPVSTKCSIDFDND 746

BLAST of MS003154 vs. TAIR 10
Match: AT5G62865.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT3G48020.1). )

HSP 1 Score: 101.7 bits (252), Expect = 5.6e-22
Identity = 59/123 (47.97%), Postives = 74/123 (60.16%), Query Frame = 0

Query: 32  CCLWLPCLRSNPSQA-GSMWWERIRT-------SEHDDD--WWLRGWRRIREWSEIVAGP 91
           CC +    RS  S A G   W RIRT        +H D+  WW+R   +IREWSEIVAGP
Sbjct: 20  CCCFPSFRRSRSSTAVGYSSWGRIRTVDDSNHSGDHGDEPRWWIRASLKIREWSEIVAGP 79

Query: 92  KWKTFIRQFNKSPR-----NRQSTFRYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFA 140
           +WKTFIR+FN+ PR     +    F+YDPLSYSLNFD+    +D +      R FSTRFA
Sbjct: 80  RWKTFIRRFNRDPRRGRDWDASEKFQYDPLSYSLNFDDDD-EEDEYVGLGGLRSFSTRFA 139

BLAST of MS003154 vs. TAIR 10
Match: AT3G48020.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: chloroplast; EXPRESSED IN: 11 plant structures; EXPRESSED DURING: LP.04 four leaves visible, 4 anthesis; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G62865.1); Has 82 Blast hits to 82 proteins in 12 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 82; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )

HSP 1 Score: 101.3 bits (251), Expect = 7.3e-22
Identity = 52/113 (46.02%), Postives = 72/113 (63.72%), Query Frame = 0

Query: 48  SMWWERIRTSEHDDD-WWLRGWRRIREWSEIVAGPKWKTFIRQFNKSPRNRQ-----STF 107
           S WW+RI  + H +  WW+R + +IREWSEIVAGP+WKTFIR+FN+ PR  Q       F
Sbjct: 22  SSWWQRIHRNNHQEPRWWVRAFLKIREWSEIVAGPRWKTFIRRFNRDPRRGQDWDDSDKF 81

Query: 108 RYDPLSYSLNFDEGPVRDDPFYEDHKRRDFSTRFAAMP-SSAKSSMDLGKDGL 154
           RYDP+SY+L+F++    DD        R FS R+A++P +S KS   +  D +
Sbjct: 82  RYDPVSYTLSFEDEDKDDDDEAGVGGVRSFSMRYASVPVASGKSPAVISVDAV 134

BLAST of MS003154 vs. TAIR 10
Match: AT5G25240.1 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). )

HSP 1 Score: 54.7 bits (130), Expect = 7.8e-08
Identity = 37/106 (34.91%), Postives = 50/106 (47.17%), Query Frame = 0

Query: 19  ADDLHESA-------FASRSCCLWLPCLRSNPSQAGSMWWERIRTSEHDDDWWLRGWRRI 78
           +DD  E+A       F S S   W      + S+ G   W      E   +W     + +
Sbjct: 10  SDDYEETAAFCGCGYFRSFSFTRWRRGDDESRSRGG---WSGCLQEERRGNWGSEKLKGL 69

Query: 79  REWSEIVAGPKWKTFIRQFN--KSPRNRQSTFRYDPLSYSLNFDEG 116
           +E SE +AGPKWK FIR F+  +    R   F YD  +YSLNFD+G
Sbjct: 70  KEISEKIAGPKWKNFIRSFSSGRKKMRRDVDFTYDLKNYSLNFDDG 112

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022134303.19.3e-8899.36uncharacterized protein LOC111006597 [Momordica charantia][more]
XP_038889212.11.1e-6479.08uncharacterized protein LOC120079097 [Benincasa hispida][more]
XP_031741765.12.1e-6376.47uncharacterized protein LOC116403956 [Cucumis sativus] >KGN52385.1 hypothetical ... [more]
KAG6602448.11.8e-6276.47hypothetical protein SDJN03_07681, partial [Cucurbita argyrosperma subsp. sorori... [more]
XP_022990588.15.2e-6275.82uncharacterized protein LOC111487422 [Cucurbita maxima][more]
Match NameE-valueIdentityDescription
Match NameE-valueIdentityDescription
A0A6J1C1N04.5e-8899.36uncharacterized protein LOC111006597 OS=Momordica charantia OX=3673 GN=LOC111006... [more]
A0A0A0KRY71.0e-6376.47Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G630870 PE=4 SV=1[more]
A0A6J1JTQ32.5e-6275.82uncharacterized protein LOC111487422 OS=Cucurbita maxima OX=3661 GN=LOC111487422... [more]
A0A6J1HFG42.5e-6276.32uncharacterized protein LOC111462557 OS=Cucurbita moschata OX=3662 GN=LOC1114625... [more]
A0A1S4E2679.8e-5972.55uncharacterized protein LOC107991628 OS=Cucumis melo OX=3656 GN=LOC107991628 PE=... [more]
Match NameE-valueIdentityDescription
AT3G01430.12.0e-3244.79BEST Arabidopsis thaliana protein match is: NHL domain-containing protein (TAIR:... [more]
AT5G14890.14.5e-3248.00NHL domain-containing protein [more]
AT5G62865.15.6e-2247.97unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TA... [more]
AT3G48020.17.3e-2246.02unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
AT5G25240.17.8e-0834.91unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biologic... [more]
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
NoneNo IPR availablePANTHERPTHR47076:SF1NHL DOMAIN PROTEINcoord: 15..155
NoneNo IPR availablePANTHERPTHR47076NHL DOMAIN PROTEINcoord: 15..155

Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
MS003154.1MS003154.1mRNA