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MS003138 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.GTTTTAATTCCCAGGAAGGAGGAAGGGATGGCAATGCAGCCAACCTTCTCAGTTTCGACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTGCGTTTTAGTAGTTTGTTACTGAATACTGCTGTGACTGATACATGGAATATGCAGCCGATGCTGGTCGCATGTGCCCGCCAGTTGATCGAACAAATCAGGTAAACCTTTCAATTCAACATTGTGGAAGCTTACAGTTAGGATTCTTCACCTACGCCTTCCGGACATCTGACTTCTTGTGTGTGTGTGCATGCCCTCTTTGAATCTTTTGAAAGTAGATAATCTATCTGACTATGAAAGTAGTAATTACTTGTAAAAGTTTGGGATCTTGACTTTTTGGGTTCCTTATGATGGATAGGATACTTTCCATATTTGGTGTTTTTGAGCCTGTTTGATTTTTGTTGAACGGCTTGAGTATTTGAAGCTCAGAACATTTTACATCCCATCAAGATAACAATATTCAAATAACATTGCTGAATATATATATTTTTTTCTTTGTGTATTTGCAGTTTGTCAGGTTCCTACAAGCCATTACTAATCTCTCTTGGCCTCAAAGACCATTCTGTGGTAATTACTCAATTATATATTTCCCTGCTTTCGGGAGTTGAGCTGAGTTTAAAATGGATTGTTTTATGTTTTGCAGGAGACGATGAAAGGCATTGTTTCTGCTGTGTCTGAGAATCGACTTTGG GTTTTAATTCCCAGGAAGGAGGAAGGGATGGCAATGCAGCCAACCTTCTCAGTTTCGACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTGCGTTTTAGTAGTTTGTTACTGAATACTGCTGTGACTGATACATGGAATATGCAGCCGATGCTGGTCGCATGTGCCCGCCAGTTGATCGAACAAATCAGTTTGTCAGGTTCCTACAAGCCATTACTAATCTCTCTTGGCCTCAAAGACCATTCTGTGGAGACGATGAAAGGCATTGTTTCTGCTGTGTCTGAGAATCGACTTTGG GTTTTAATTCCCAGGAAGGAGGAAGGGATGGCAATGCAGCCAACCTTCTCAGTTTCGACCGTTTTTGGCAAAAGAGATGAGGTAAGTCAGCTGCGTTTTAGTAGTTTGTTACTGAATACTGCTGTGACTGATACATGGAATATGCAGCCGATGCTGGTCGCATGTGCCCGCCAGTTGATCGAACAAATCAGTTTGTCAGGTTCCTACAAGCCATTACTAATCTCTCTTGGCCTCAAAGACCATTCTGTGGAGACGATGAAAGGCATTGTTTCTGCTGTGTCTGAGAATCGACTTTGG VLIPRKEEGMAMQPTFSVSTVFGKRDEVSQLRFSSLLLNTAVTDTWNMQPMLVACARQLIEQISLSGSYKPLLISLGLKDHSVETMKGIVSAVSENRLW Homology
BLAST of MS003138 vs. NCBI nr
Match: KAG7016194.1 (hypothetical protein SDJN02_21299 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 169.1 bits (427), Expect = 1.9e-38 Identity = 85/99 (85.86%), Postives = 91/99 (91.92%), Query Frame = 0
BLAST of MS003138 vs. NCBI nr
Match: KAA0042745.1 (uncharacterized protein E6C27_scaffold44G002440 [Cucumis melo var. makuwa]) HSP 1 Score: 163.7 bits (413), Expect = 8.1e-37 Identity = 81/99 (81.82%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of MS003138 vs. NCBI nr
Match: XP_022133617.1 (proteasome assembly chaperone 3 isoform X1 [Momordica charantia]) HSP 1 Score: 133.3 bits (334), Expect = 1.2e-27 Identity = 74/99 (74.75%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of MS003138 vs. NCBI nr
Match: XP_022990970.1 (uncharacterized protein LOC111487705 isoform X1 [Cucurbita maxima] >XP_022990971.1 uncharacterized protein LOC111487705 isoform X1 [Cucurbita maxima]) HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25 Identity = 68/99 (68.69%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of MS003138 vs. NCBI nr
Match: XP_022990973.1 (uncharacterized protein LOC111487705 isoform X3 [Cucurbita maxima] >XP_022990974.1 uncharacterized protein LOC111487705 isoform X3 [Cucurbita maxima]) HSP 1 Score: 125.2 bits (313), Expect = 3.2e-25 Identity = 68/99 (68.69%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of MS003138 vs. ExPASy TrEMBL
Match: A0A5A7TMV9 (Uncharacterized protein OS=Cucumis melo var. makuwa OX=1194695 GN=E6C27_scaffold44G002440 PE=4 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 3.9e-37 Identity = 81/99 (81.82%), Postives = 89/99 (89.90%), Query Frame = 0
BLAST of MS003138 vs. ExPASy TrEMBL
Match: A0A6J1BX71 (proteasome assembly chaperone 3 isoform X1 OS=Momordica charantia OX=3673 GN=LOC111006156 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 5.7e-28 Identity = 74/99 (74.75%), Postives = 75/99 (75.76%), Query Frame = 0
BLAST of MS003138 vs. ExPASy TrEMBL
Match: A0A6J1JTH5 (uncharacterized protein LOC111487705 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487705 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25 Identity = 68/99 (68.69%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of MS003138 vs. ExPASy TrEMBL
Match: A0A6J1JPF5 (uncharacterized protein LOC111487705 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111487705 PE=4 SV=1) HSP 1 Score: 125.2 bits (313), Expect = 1.6e-25 Identity = 68/99 (68.69%), Postives = 74/99 (74.75%), Query Frame = 0
BLAST of MS003138 vs. ExPASy TrEMBL
Match: A0A6J1JTJ3 (uncharacterized protein LOC111489603 isoform X1 OS=Cucurbita maxima OX=3661 GN=LOC111489603 PE=4 SV=1) HSP 1 Score: 123.2 bits (308), Expect = 5.9e-25 Identity = 68/99 (68.69%), Postives = 73/99 (73.74%), Query Frame = 0
BLAST of MS003138 vs. TAIR 10
Match: AT5G14710.1 (CONTAINS InterPro DOMAIN/s: Proteasome assembly chaperone 3 (InterPro:IPR018788); Has 120 Blast hits to 120 proteins in 47 species: Archae - 0; Bacteria - 0; Metazoa - 62; Fungi - 2; Plants - 49; Viruses - 0; Other Eukaryotes - 7 (source: NCBI BLink). ) HSP 1 Score: 92.0 bits (227), Expect = 2.8e-19 Identity = 52/99 (52.53%), Postives = 62/99 (62.63%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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