Homology
BLAST of MS003134 vs. NCBI nr
Match:
XP_022134069.1 (50S ribosomal protein L12, chloroplastic-like [Momordica charantia])
HSP 1 Score: 329.7 bits (844), Expect = 1.7e-86
Identity = 190/191 (99.48%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP
Sbjct: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
Query: 61 EKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
EKIE+LGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE
Sbjct: 61 EKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
Query: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 191
BLAST of MS003134 vs. NCBI nr
Match:
XP_023536532.1 (50S ribosomal protein L12, chloroplastic-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 275.4 bits (703), Expect = 3.7e-70
Identity = 170/193 (88.08%), Postives = 179/193 (92.75%), Query Frame = 0
Query: 1 MASTLSTL-TLRSPSYLSHSPRSISTHSS-KSAVQFPFYPSSAAAISHRATLLRPIAAVS 60
MASTLSTL TLRSP++LS+S S ST SS + +QFPF PSS A SHRAT LRPIAAVS
Sbjct: 1 MASTLSTLTTLRSPTHLSYSHSSFSTQSSISTTLQFPFNPSSTAT-SHRATYLRPIAAVS 60
Query: 61 APEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAV 120
APEKIE+LG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPAAVVAAPGAA AGDAAAEAV
Sbjct: 61 APEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGAA-AGDAAAEAV 120
Query: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAK 180
EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAK
Sbjct: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 191
BLAST of MS003134 vs. NCBI nr
Match:
XP_038890576.1 (50S ribosomal protein L12, chloroplastic-like [Benincasa hispida])
HSP 1 Score: 275.4 bits (703), Expect = 3.7e-70
Identity = 166/192 (86.46%), Postives = 176/192 (91.67%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKS-AVQFPFYPSSAAAISHRATLLRPIAAVSA 60
MASTLS LTL SPS+LS+S S+STHS KS +QFP + SS A+SHRAT LRPIAA+SA
Sbjct: 1 MASTLSILTLHSPSHLSYSHSSLSTHSFKSTTLQFPSHLSS-IAVSHRATHLRPIAAISA 60
Query: 61 PEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVE 120
PEKIE+LGSDISNLTLEEARLLVDFLQDKLGVSAA+FAPAAVVAAPG G+AAAEAVE
Sbjct: 61 PEKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAASFAPAAVVAAPGGTAGGEAAAEAVE 120
Query: 121 EKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKK 180
EKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKK
Sbjct: 121 EKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKK 180
Query: 181 QLEEAGAKIAIV 192
QLEEAGAKIAIV
Sbjct: 181 QLEEAGAKIAIV 191
BLAST of MS003134 vs. NCBI nr
Match:
XP_022960313.1 (50S ribosomal protein L12, chloroplastic-like [Cucurbita moschata] >KAG6602432.1 50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. sororia])
HSP 1 Score: 275.4 bits (703), Expect = 3.7e-70
Identity = 171/193 (88.60%), Postives = 178/193 (92.23%), Query Frame = 0
Query: 1 MASTLSTL-TLRSPSYLSHSPRSISTHSSKS-AVQFPFYPSSAAAISHRATLLRPIAAVS 60
MASTLSTL TLRSP +LS+S S ST SS S +QFPF PSS A SHRAT LRPIAAVS
Sbjct: 1 MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTAT-SHRATYLRPIAAVS 60
Query: 61 APEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAV 120
APEKIE+LG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPAAVVAAPGAA AGDAAAEAV
Sbjct: 61 APEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGAA-AGDAAAEAV 120
Query: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAK 180
EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAK
Sbjct: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 191
BLAST of MS003134 vs. NCBI nr
Match:
KAG7033112.1 (50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 274.6 bits (701), Expect = 6.3e-70
Identity = 170/193 (88.08%), Postives = 178/193 (92.23%), Query Frame = 0
Query: 1 MASTLSTL-TLRSPSYLSHSPRSISTHSS-KSAVQFPFYPSSAAAISHRATLLRPIAAVS 60
MASTLSTL TLRSP +LS+S S ST SS + +QFPF PSS A SHRAT LRPIAAVS
Sbjct: 1 MASTLSTLTTLRSPPHLSYSHSSFSTQSSISTTLQFPFNPSSTAT-SHRATYLRPIAAVS 60
Query: 61 APEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAV 120
APEKIE+LG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPAAVVAAPGAA AGDAAAEAV
Sbjct: 61 APEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGAA-AGDAAAEAV 120
Query: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAK 180
EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAK
Sbjct: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 191
BLAST of MS003134 vs. ExPASy Swiss-Prot
Match:
P24929 (50S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL12 PE=1 SV=1)
HSP 1 Score: 214.2 bits (544), Expect = 1.3e-54
Identity = 133/190 (70.00%), Postives = 152/190 (80.00%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
MASTLST+TLRSPS + S S K A++FP + RAT LRP+AAV AP
Sbjct: 1 MASTLSTITLRSPSPSTASSTHASIPFPKKALEFPI--RTPKLHHRRATFLRPLAAVEAP 60
Query: 61 EKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
EK+ QLG +ISNLTL +A+ LV++LQDKLGV+AA+FAPAAV AAPGAA A VEE
Sbjct: 61 EKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVAAAPGAAAEAPA---VVEE 120
Query: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
KTEFDVVI++VPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEGVSK+EAEDAKKQ
Sbjct: 121 KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQ 180
Query: 181 LEEAGAKIAI 191
LEEAGAK++I
Sbjct: 181 LEEAGAKVSI 185
BLAST of MS003134 vs. ExPASy Swiss-Prot
Match:
P36688 (50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV=1)
HSP 1 Score: 213.8 bits (543), Expect = 1.7e-54
Identity = 132/190 (69.47%), Postives = 153/190 (80.53%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
MASTLST+TLRSPS + + S K ++FP + + RAT LRP+AAV AP
Sbjct: 1 MASTLSTITLRSPSPSTATSTHASIPFPKKTLEFPI--RTPKLQNRRATFLRPLAAVEAP 60
Query: 61 EKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
EK+ QLG +ISNLTL +A+ LV++LQDKLGV+AA+FAPAAVVAAPGAA A VEE
Sbjct: 61 EKVVQLGDEISNLTLADAQKLVEYLQDKLGVTAASFAPAAVVAAPGAAAEAPA---VVEE 120
Query: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
KTEFDVVI++VPSNARIA IKAVRALTSLALKEAKELIEGLPKKFKEGVSK+EAEDAKKQ
Sbjct: 121 KTEFDVVIDEVPSNARIATIKAVRALTSLALKEAKELIEGLPKKFKEGVSKDEAEDAKKQ 180
Query: 181 LEEAGAKIAI 191
LEEAGAK++I
Sbjct: 181 LEEAGAKVSI 185
BLAST of MS003134 vs. ExPASy Swiss-Prot
Match:
P02398 (50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 PE=1 SV=2)
HSP 1 Score: 208.0 bits (528), Expect = 9.5e-53
Identity = 132/193 (68.39%), Postives = 152/193 (78.76%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSS--AAAISHRATLLRPIAAVS 60
MA+T + TL PS SH P S + +QFPF ++ + S R T LRPIAAV
Sbjct: 1 MAATTTMATLNLPSLTSH-PNSSTFPKHPQPLQFPFRTTTNPISLSSTRTTRLRPIAAVE 60
Query: 61 APEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAV 120
APEKIEQLG+ +S LTLEEAR+LVD+LQDKLGVSAA+FAPAA VAAPGA AA AV
Sbjct: 61 APEKIEQLGTQLSGLTLEEARVLVDWLQDKLGVSAASFAPAAAVAAPGAPA---DAAPAV 120
Query: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAK 180
EEKTEFDV I++VPSNARI+VIKAVRALTSL LKEAKELIEGLPKK KEGVSK++AEDAK
Sbjct: 121 EEKTEFDVSIDEVPSNARISVIKAVRALTSLGLKEAKELIEGLPKKLKEGVSKDDAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLE+AGAK++IV
Sbjct: 181 KQLEDAGAKVSIV 189
BLAST of MS003134 vs. ExPASy Swiss-Prot
Match:
P36212 (50S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12C PE=2 SV=2)
HSP 1 Score: 194.5 bits (493), Expect = 1.1e-48
Identity = 129/196 (65.82%), Postives = 156/196 (79.59%), Query Frame = 0
Query: 1 MASTLSTL--TLRSPSYLSHSPRSISTH---SSKSAVQFPFYPSSAAAISHRATLLRPIA 60
MAST ++ T+RS S L+ S STH S +A++FPF SS++ SHRA LRPI+
Sbjct: 1 MASTTLSIATTIRSSSPLT----SASTHHFLSKPTAIEFPFRLSSSS--SHRAINLRPIS 60
Query: 61 AVSAPEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP-AAVVAAPGAAGAGDAA 120
AV APEKIE++GS+IS+LTLEEAR+LVD+LQDK GVS + AP AA VAAP G A
Sbjct: 61 AVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG----A 120
Query: 121 AEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEA 180
A VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++K+EA
Sbjct: 121 AAVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEA 180
Query: 181 EDAKKQLEEAGAKIAI 191
E+AKK LEEAGAK++I
Sbjct: 181 EEAKKTLEEAGAKVSI 186
BLAST of MS003134 vs. ExPASy Swiss-Prot
Match:
P36210 (50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RPL12A PE=2 SV=1)
HSP 1 Score: 193.0 bits (489), Expect = 3.2e-48
Identity = 126/200 (63.00%), Postives = 155/200 (77.50%), Query Frame = 0
Query: 1 MASTLSTL--TLRSPSY-----LSHSPRSISTHSSKSAVQFP--FYPSSAAAISHRATLL 60
MAST ++ T+RS SY ++H P S + ++FP F S++ ++HRAT L
Sbjct: 1 MASTTLSIATTIRSSSYPTLASINHFP------SRTTTIEFPSRFGGGSSSTLTHRATHL 60
Query: 61 RPIAAVSAPEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP-AAVVAAPGAAGA 120
RPIAAV APEKIE++GS+IS+LTLEEAR+LVD+LQDK GVS + AP AA VAAP G
Sbjct: 61 RPIAAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG- 120
Query: 121 GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVS 180
AA VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++
Sbjct: 121 ---AAAVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGIT 180
Query: 181 KEEAEDAKKQLEEAGAKIAI 191
K+EAE+AKK LEEAGAK++I
Sbjct: 181 KDEAEEAKKTLEEAGAKVSI 190
BLAST of MS003134 vs. ExPASy TrEMBL
Match:
A0A6J1BXR2 (50S ribosomal protein L12, chloroplastic-like OS=Momordica charantia OX=3673 GN=LOC111006430 PE=3 SV=1)
HSP 1 Score: 329.7 bits (844), Expect = 8.0e-87
Identity = 190/191 (99.48%), Postives = 191/191 (100.00%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP
Sbjct: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
Query: 61 EKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
EKIE+LGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE
Sbjct: 61 EKIEKLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
Query: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKIAIV
Sbjct: 181 LEEAGAKIAIV 191
BLAST of MS003134 vs. ExPASy TrEMBL
Match:
A0A6J1H8H9 (50S ribosomal protein L12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111461079 PE=3 SV=1)
HSP 1 Score: 275.4 bits (703), Expect = 1.8e-70
Identity = 171/193 (88.60%), Postives = 178/193 (92.23%), Query Frame = 0
Query: 1 MASTLSTL-TLRSPSYLSHSPRSISTHSSKS-AVQFPFYPSSAAAISHRATLLRPIAAVS 60
MASTLSTL TLRSP +LS+S S ST SS S +QFPF PSS A SHRAT LRPIAAVS
Sbjct: 1 MASTLSTLTTLRSPPHLSYSHSSFSTQSSTSTTLQFPFNPSSTAT-SHRATYLRPIAAVS 60
Query: 61 APEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAV 120
APEKIE+LG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPAAVVAAPGAA AGDAAAEAV
Sbjct: 61 APEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGAA-AGDAAAEAV 120
Query: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAK 180
EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAK
Sbjct: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 191
BLAST of MS003134 vs. ExPASy TrEMBL
Match:
A0A6J1JNN0 (50S ribosomal protein L12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111486956 PE=3 SV=1)
HSP 1 Score: 274.6 bits (701), Expect = 3.1e-70
Identity = 170/193 (88.08%), Postives = 178/193 (92.23%), Query Frame = 0
Query: 1 MASTLSTLT-LRSPSYLSHSPRSISTHSS-KSAVQFPFYPSSAAAISHRATLLRPIAAVS 60
MASTLSTLT LRSP +LS+S S ST SS + +QFPF PSS A SHRATLLRPIAAVS
Sbjct: 1 MASTLSTLTSLRSPLHLSYSHSSFSTQSSISTTLQFPFNPSSTAT-SHRATLLRPIAAVS 60
Query: 61 APEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAV 120
APEKIE+LG+DISNLTLEEAR+LVDFLQDKLGVSAAAFAPA VVAAPGAA AGDAAAEAV
Sbjct: 61 APEKIEKLGADISNLTLEEARILVDFLQDKLGVSAAAFAPAVVVAAPGAA-AGDAAAEAV 120
Query: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAK 180
EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEG+SKEEAEDAK
Sbjct: 121 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGISKEEAEDAK 180
Query: 181 KQLEEAGAKIAIV 192
KQLEEAGAKIAIV
Sbjct: 181 KQLEEAGAKIAIV 191
BLAST of MS003134 vs. ExPASy TrEMBL
Match:
A0A6J1FMH9 (50S ribosomal protein L12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=LOC111445547 PE=3 SV=1)
HSP 1 Score: 264.2 bits (674), Expect = 4.1e-67
Identity = 159/191 (83.25%), Postives = 168/191 (87.96%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
MASTLSTLTLR+PS LSHS S ST SSK P++ +SHR T LRPIAAVSAP
Sbjct: 1 MASTLSTLTLRTPSLLSHSHSSFSTLSSK--------PTTLPFLSHRTTRLRPIAAVSAP 60
Query: 61 EKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
EKIE+LGSDISNLTLEEAR+LVDFLQDKLGVSAAAFAPAAVVAAPG GDAAAEAVEE
Sbjct: 61 EKIEKLGSDISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGGVAGGDAAAEAVEE 120
Query: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
KTEFDVVIE+VPSNARIAVIK+VRALT+LALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARIAVIKSVRALTNLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKI IV
Sbjct: 181 LEEAGAKITIV 183
BLAST of MS003134 vs. ExPASy TrEMBL
Match:
A0A6J1JTI3 (50S ribosomal protein L12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC111489595 PE=3 SV=1)
HSP 1 Score: 262.3 bits (669), Expect = 1.6e-66
Identity = 159/191 (83.25%), Postives = 167/191 (87.43%), Query Frame = 0
Query: 1 MASTLSTLTLRSPSYLSHSPRSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAP 60
MASTLSTLTLR+PS LSHS S ST SSK P++ SHRAT LRPIAAVSAP
Sbjct: 1 MASTLSTLTLRTPSLLSHSHSSFSTLSSK--------PTTLPFPSHRATRLRPIAAVSAP 60
Query: 61 EKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAVEE 120
EKIE+LGSDISNLTLEEAR+LVDFLQDKLGVSAAAFAPAAVVAAPG GD AAEAVEE
Sbjct: 61 EKIEKLGSDISNLTLEEARILVDFLQDKLGVSAAAFAPAAVVAAPGGVAGGDVAAEAVEE 120
Query: 121 KTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
KTEFDVVIE+VPSNARIAVIK+VRALT+LALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ
Sbjct: 121 KTEFDVVIEEVPSNARIAVIKSVRALTNLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQ 180
Query: 181 LEEAGAKIAIV 192
LEEAGAKI IV
Sbjct: 181 LEEAGAKITIV 183
BLAST of MS003134 vs. TAIR 10
Match:
AT3G27850.1 (ribosomal protein L12-C )
HSP 1 Score: 194.5 bits (493), Expect = 7.7e-50
Identity = 129/196 (65.82%), Postives = 156/196 (79.59%), Query Frame = 0
Query: 1 MASTLSTL--TLRSPSYLSHSPRSISTH---SSKSAVQFPFYPSSAAAISHRATLLRPIA 60
MAST ++ T+RS S L+ S STH S +A++FPF SS++ SHRA LRPI+
Sbjct: 1 MASTTLSIATTIRSSSPLT----SASTHHFLSKPTAIEFPFRLSSSS--SHRAINLRPIS 60
Query: 61 AVSAPEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP-AAVVAAPGAAGAGDAA 120
AV APEKIE++GS+IS+LTLEEAR+LVD+LQDK GVS + AP AA VAAP G A
Sbjct: 61 AVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG----A 120
Query: 121 AEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEA 180
A VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++K+EA
Sbjct: 121 AAVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGITKDEA 180
Query: 181 EDAKKQLEEAGAKIAI 191
E+AKK LEEAGAK++I
Sbjct: 181 EEAKKTLEEAGAKVSI 186
BLAST of MS003134 vs. TAIR 10
Match:
AT3G27830.1 (ribosomal protein L12-A )
HSP 1 Score: 193.0 bits (489), Expect = 2.2e-49
Identity = 126/200 (63.00%), Postives = 155/200 (77.50%), Query Frame = 0
Query: 1 MASTLSTL--TLRSPSY-----LSHSPRSISTHSSKSAVQFP--FYPSSAAAISHRATLL 60
MAST ++ T+RS SY ++H P S + ++FP F S++ ++HRAT L
Sbjct: 1 MASTTLSIATTIRSSSYPTLASINHFP------SRTTTIEFPSRFGGGSSSTLTHRATHL 60
Query: 61 RPIAAVSAPEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAP-AAVVAAPGAAGA 120
RPIAAV APEKIE++GS+IS+LTLEEAR+LVD+LQDK GVS + AP AA VAAP G
Sbjct: 61 RPIAAVEAPEKIEKIGSEISSLTLEEARILVDYLQDKFGVSPLSLAPAAAAVAAPADGG- 120
Query: 121 GDAAAEAVEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVS 180
AA VEE+TEFDVVI +VPS++RIAVIKAVRALTSLALKEAKELIEGLPKKFKEG++
Sbjct: 121 ---AAAVVEEQTEFDVVINEVPSSSRIAVIKAVRALTSLALKEAKELIEGLPKKFKEGIT 180
Query: 181 KEEAEDAKKQLEEAGAKIAI 191
K+EAE+AKK LEEAGAK++I
Sbjct: 181 KDEAEEAKKTLEEAGAKVSI 190
BLAST of MS003134 vs. TAIR 10
Match:
AT3G27840.1 (ribosomal protein L12-B )
HSP 1 Score: 163.3 bits (412), Expect = 1.9e-40
Identity = 106/193 (54.92%), Postives = 138/193 (71.50%), Query Frame = 0
Query: 2 ASTLS-TLTLRSPSYLSHSPRSISTHSSKSAVQFPFY--PSSAAAISHRATLLRPIAAVS 61
A+TLS T+RS S+ S + S +++FPF SS++ +SHRA L PI+AV
Sbjct: 3 ATTLSIATTIRSSSFSSGLASAHHFPSRPLSIEFPFSFGVSSSSTLSHRAIYLHPISAVK 62
Query: 62 APEKIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFAPAAVVAAPGAAGAGDAAAEAV 121
P+KI+++GS+IS+LTLEE+R+LVD++QDK GVS APAA P G A +V
Sbjct: 63 TPKKIKKIGSEISSLTLEESRILVDYVQDKFGVSILFSAPAAAALPPPLDNGG--ATASV 122
Query: 122 EEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAK 181
E +T FDVVI DVP RIAVI A+RA+TSL+L E+KELIEG PKKFKEGV+K+EAE+ K
Sbjct: 123 ERQTTFDVVINDVPRGNRIAVITAIRAMTSLSLSESKELIEGFPKKFKEGVTKDEAEEDK 182
Query: 182 KQLEEAGAKIAIV 192
QLEEAGAK++IV
Sbjct: 183 TQLEEAGAKVSIV 193
BLAST of MS003134 vs. TAIR 10
Match:
AT4G36420.1 (Ribosomal protein L12 family protein )
HSP 1 Score: 72.8 bits (177), Expect = 3.4e-13
Identity = 63/176 (35.80%), Postives = 97/176 (55.11%), Query Frame = 0
Query: 21 RSISTHSSKSAVQFPFYPSSAAAISHRATLLRPIAAVSAPEKIEQLGSDISNLTLEEARL 80
R IS+H S+ SS + ++ A S E + ++ +++SNLTL E
Sbjct: 5 RIISSHFSRVLKSTETRSSSVQLFTIQSRSYSSPATQS--ENVSKIVNELSNLTLLETMD 64
Query: 81 LVDFLQDKLGVS----AAAFAPAAVVAAPGA--AGAGDAAAEAVEEKTEFDVVIEDVPSN 140
L + L+ KL +S AA P + GA + G+ + E KT FDV+++ +
Sbjct: 65 LTEILRQKLNISELPVMAAMMPGMSLPGSGASKSAGGEGKEKKKEAKTAFDVMLQAYDAV 124
Query: 141 ARIAVIKAVRALTSLALKEAKELIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI 191
++I VIK VR +T+L LKEAK+L+E P K+GVSKEEAE ++L+ GAK+A+
Sbjct: 125 SKIKVIKEVRTITALGLKEAKDLVEKAPTLLKKGVSKEEAEKIIEKLKAVGAKVAM 178
BLAST of MS003134 vs. TAIR 10
Match:
AT4G37660.1 (Ribosomal protein L12/ ATP-dependent Clp protease adaptor protein ClpS family protein )
HSP 1 Score: 65.1 bits (157), Expect = 7.1e-11
Identity = 57/154 (37.01%), Postives = 82/154 (53.25%), Query Frame = 0
Query: 46 HRATLL----RPIAAVSAPE----KIEQLGSDISNLTLEEARLLVDFLQDKLGVSAAAFA 105
HR T L R + AV++PE K+E++ D+ L E K+G++ A
Sbjct: 17 HRTTPLSSATRHLCAVASPEARTKKLERIADDLLKLNRIELYDYSLLFSHKIGLNRYGSA 76
Query: 106 PAAVVAAPGAAGAGDAAAEA-VEEKTEFDVVIEDVPSNARIAVIKAVRALTSLALKEAKE 165
VA G+ G A+ E EKT FDV +E + ++I VIK +RA T L LKEAK
Sbjct: 77 ----VAVTGSVGDASASTETKTAEKTTFDVKLEKFEAASKIKVIKEIRAFTDLGLKEAKA 136
Query: 166 LIEGLPKKFKEGVSKEEAEDAKKQLEEAGAKIAI 191
L+E P K G++KEEAE ++L+ GA +A+
Sbjct: 137 LVEKAPVIVKNGLTKEEAEKIMEKLKAVGAIVAL 166
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134069.1 | 1.7e-86 | 99.48 | 50S ribosomal protein L12, chloroplastic-like [Momordica charantia] | [more] |
XP_023536532.1 | 3.7e-70 | 88.08 | 50S ribosomal protein L12, chloroplastic-like [Cucurbita pepo subsp. pepo] | [more] |
XP_038890576.1 | 3.7e-70 | 86.46 | 50S ribosomal protein L12, chloroplastic-like [Benincasa hispida] | [more] |
XP_022960313.1 | 3.7e-70 | 88.60 | 50S ribosomal protein L12, chloroplastic-like [Cucurbita moschata] >KAG6602432.1... | [more] |
KAG7033112.1 | 6.3e-70 | 88.08 | 50S ribosomal protein L12-1, chloroplastic, partial [Cucurbita argyrosperma subs... | [more] |
Match Name | E-value | Identity | Description | |
P24929 | 1.3e-54 | 70.00 | 50S ribosomal protein L12, chloroplastic OS=Nicotiana tabacum OX=4097 GN=RPL12 P... | [more] |
P36688 | 1.7e-54 | 69.47 | 50S ribosomal protein L12, chloroplastic OS=Nicotiana sylvestris OX=4096 PE=2 SV... | [more] |
P02398 | 9.5e-53 | 68.39 | 50S ribosomal protein L12, chloroplastic OS=Spinacia oleracea OX=3562 GN=RPL12 P... | [more] |
P36212 | 1.1e-48 | 65.82 | 50S ribosomal protein L12-3, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RP... | [more] |
P36210 | 3.2e-48 | 63.00 | 50S ribosomal protein L12-1, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=RP... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BXR2 | 8.0e-87 | 99.48 | 50S ribosomal protein L12, chloroplastic-like OS=Momordica charantia OX=3673 GN=... | [more] |
A0A6J1H8H9 | 1.8e-70 | 88.60 | 50S ribosomal protein L12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... | [more] |
A0A6J1JNN0 | 3.1e-70 | 88.08 | 50S ribosomal protein L12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... | [more] |
A0A6J1FMH9 | 4.1e-67 | 83.25 | 50S ribosomal protein L12, chloroplastic-like OS=Cucurbita moschata OX=3662 GN=L... | [more] |
A0A6J1JTI3 | 1.6e-66 | 83.25 | 50S ribosomal protein L12, chloroplastic OS=Cucurbita maxima OX=3661 GN=LOC11148... | [more] |