Homology
BLAST of MS003127 vs. NCBI nr
Match:
XP_022134426.1 (DExH-box ATP-dependent RNA helicase DExH17 [Momordica charantia])
HSP 1 Score: 2162.5 bits (5602), Expect = 0.0e+00
Identity = 1094/1127 (97.07%), Postives = 1101/1127 (97.69%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ
Sbjct: 44 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 103
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL
Sbjct: 104 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 163
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDL + + +
Sbjct: 164 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLAE-WLK 223
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYSRGKSA
Sbjct: 224 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSRGKSA 283
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 284 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 343
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 344 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 403
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT
Sbjct: 404 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 463
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL
Sbjct: 464 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 523
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI
Sbjct: 524 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 583
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 584 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 643
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLL+KSLYQKLWDDSPFLLKQ
Sbjct: 644 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLSKSLYQKLWDDSPFLLKQ 703
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL
Sbjct: 704 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 763
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EEVECPRQGKAKLIVTLTRLPQSYRPSK+HYADMIVGSEEDNQILFHEKI SPYS
Sbjct: 764 EEVECPRQGKAKLIVTLTRLPQSYRPSKQHYADMIVGSEEDNQILFHEKIRVDEFSSPYS 823
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL
Sbjct: 824 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 883
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE
Sbjct: 884 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 943
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIREKAKSFPVLGASKNRAY PAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA
Sbjct: 944 RTVFDHIREKAKSFPVLGASKNRAYLPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 1003
Query: 961 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1020
NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK
Sbjct: 1004 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1063
Query: 1021 RKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1080
RKANSFPVVSQF VNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP
Sbjct: 1064 RKANSFPVVSQFCVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1123
Query: 1081 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL
Sbjct: 1124 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1163
BLAST of MS003127 vs. NCBI nr
Match:
XP_023527908.1 (DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1963.0 bits (5084), Expect = 0.0e+00
Identity = 993/1127 (88.11%), Postives = 1037/1127 (92.01%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIH KGTLKSIY+APSKALVQEKLRDWNQ
Sbjct: 43 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQ 102
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETY+MK+IQEADIILTTPEKFDAVTRY IKDGGL FFSDIALVL
Sbjct: 103 KFGSWGVSCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFSDIALVL 162
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMI+R+PEMKSSPLS VRFLAVSATIPNIGDL + +
Sbjct: 163 IDEVHLLNDPRGAALEAIVSRIKMISRNPEMKSSPLSHVRFLAVSATIPNIGDLAE-WLN 222
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYS+GKSA
Sbjct: 223 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSKGKSA 282
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 283 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 342
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDI+VICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 343 GYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 402
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCE VESQLLSCVTEHLT
Sbjct: 403 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCVTEHLT 462
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTI DI+KAIEW+KCSYLYVRMKKNP+KYAIRNGI HNTEKHMEDICIEKVNEL
Sbjct: 463 AEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAIRNGISYHNTEKHMEDICIEKVNEL 522
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EALHIICHAEEI
Sbjct: 523 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEI 582
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRR EKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 583 AWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 642
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNY GTF+SMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 643 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYTGTFSSMLLAKSLYQKLWDDSPFLLKQ 702
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 703 LPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPEVDLKL 762
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EE EC RQGKAKLIVTLTRLPQSYRP+KRHYA+MIVG EEDN ILFHEKI SPYS
Sbjct: 763 EEAECGRQGKAKLIVTLTRLPQSYRPNKRHYAEMIVGLEEDNHILFHEKIRVDEFSSPYS 822
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
A+VLV HPQ+GKLTIKADLIFDEYIGIDLHRKLQLMERNSNAR+KWGRMP SSF PPEE+
Sbjct: 823 AVVLVSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARSKWGRMPPSSFPPPEEV 882
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
Y+ID+DSEPLPQ A KE P+S DSN+LLDSMPSFNLLDEE +AEPATGNDEDECKIITE
Sbjct: 883 YIIDNDSEPLPQAAVKEPPKSGDSNSLLDSMPSFNLLDEEFEDAEPATGNDEDECKIITE 942
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIR+KAKSFPVL ASKN AYSPAPE YS TRN Q +E QVEALEEKQRNE SPH
Sbjct: 943 RTVFDHIRKKAKSFPVLAASKNSAYSPAPETYSFTRNTQPLEFQVEALEEKQRNELSPHT 1002
Query: 961 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1020
V+SFSGFREE+GN++ TLQNH SG H DD KG E+ LQTEES+II+TEETIFD I
Sbjct: 1003 KVESFSGFREEVGNEFPTLQNHFPSGPHFMDDEKG--EMGLQTEESEIIITEETIFDDII 1062
Query: 1021 RKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1080
RK NSFPVVSQ VNT G Y KLN+ SDAE+AS QMLSFDISM+KE KRPRP
Sbjct: 1063 RKGNSFPVVSQICVNTPGAYSKLNR--------ASDAEVASMQMLSFDISMVKENKRPRP 1122
Query: 1081 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
ASPNIS+TW+HQSPPV++KK CCSLETATETREVDPFVGFKSVFSFL
Sbjct: 1123 ASPNISNTWNHQSPPVETKKNCCSLETATETREVDPFVGFKSVFSFL 1152
BLAST of MS003127 vs. NCBI nr
Match:
XP_022989936.1 (DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita maxima])
HSP 1 Score: 1960.3 bits (5077), Expect = 0.0e+00
Identity = 992/1127 (88.02%), Postives = 1035/1127 (91.84%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIH KGTLKSIY+APSKALVQEKLRDWNQ
Sbjct: 119 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQ 178
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGV CLELTGDNETY+MK+IQEADIILTTPEKFDAVTRY IKDGGL FFSDIALVL
Sbjct: 179 KFGSWGVCCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFSDIALVL 238
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMI+R+PEMKSSPLS VRFLAVSATIPNIGDL +
Sbjct: 239 IDEVHLLNDPRGAALEAIVSRIKMISRNPEMKSSPLSHVRFLAVSATIPNIGDLAD-WLN 298
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYS+GKSA
Sbjct: 299 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSKGKSA 358
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 359 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 418
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDI+VICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 419 GYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 478
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCE VESQLLSC+TEHLT
Sbjct: 479 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCLTEHLT 538
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTI DI+KAIEW+KCSYLYVRMKKNP+KYAIRNGI NTEKHMEDICIEKVN+L
Sbjct: 539 AEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAIRNGISYQNTEKHMEDICIEKVNDL 598
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EALHIICHAEEI
Sbjct: 599 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEI 658
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRR EKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 659 AWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 718
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYF+YRKNYKGTF+SMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 719 HDLSLSQDMNSICSNGCRIAKCMKEYFLYRKNYKGTFSSMLLAKSLYQKLWDDSPFLLKQ 778
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 779 LPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPVVDLKL 838
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EE EC RQGKAKLIVTLTRLPQ+YRP+KRHYADMIVG EEDNQILFHEKI SPYS
Sbjct: 839 EEAECGRQGKAKLIVTLTRLPQAYRPNKRHYADMIVGLEEDNQILFHEKIRVDEFSSPYS 898
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
A+VLV HPQ+GKLTIKADLIFDEYIGIDLHRKLQLMERNSNAR+KWGR P SSF PPEE+
Sbjct: 899 AVVLVSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARSKWGRTPPSSFPPPEEV 958
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
Y+ID+DSEPLPQ A KE P+S DSN+LLDSMPSFNLLDEE +AEPATGNDEDECKIITE
Sbjct: 959 YIIDNDSEPLPQAAVKEPPKSGDSNSLLDSMPSFNLLDEEFEDAEPATGNDEDECKIITE 1018
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIR+KAKSFPVL ASKN AYSPAPE YS TRN Q +E QVEALEEKQRNE SPH
Sbjct: 1019 RTVFDHIRKKAKSFPVLAASKNSAYSPAPETYSFTRNTQPLEFQVEALEEKQRNELSPHT 1078
Query: 961 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1020
V+SFSGFREE+GN++ TLQNH TSG H D KG EL LQTEESKII+TEETIFD IK
Sbjct: 1079 EVESFSGFREEVGNEFPTLQNHFTSGPHFMDGEKG--ELGLQTEESKIIITEETIFDDIK 1138
Query: 1021 RKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1080
RK NSFPVVSQ VNT G Y KLN+ SDAE+AS QML FDISMMKE KRPRP
Sbjct: 1139 RKGNSFPVVSQICVNTPGAYSKLNR--------ASDAEVASMQMLCFDISMMKENKRPRP 1198
Query: 1081 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
ASPNIS+TW+HQSPPV++KK CCSLETATETREVDPFVGFKSVFSFL
Sbjct: 1199 ASPNISNTWNHQSPPVETKKNCCSLETATETREVDPFVGFKSVFSFL 1228
BLAST of MS003127 vs. NCBI nr
Match:
XP_022962158.1 (DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita moschata])
HSP 1 Score: 1960.3 bits (5077), Expect = 0.0e+00
Identity = 992/1127 (88.02%), Postives = 1035/1127 (91.84%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIH KGTLKSIY+APSKALVQEKLRDWNQ
Sbjct: 126 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQ 185
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETY+MK+IQEADIILTTPEKFDAVTRY IKDGGL FF DIALVL
Sbjct: 186 KFGSWGVSCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFGDIALVL 245
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMI+R+PEMKSSPLS VRFLAVSATIPNIGDL + +
Sbjct: 246 IDEVHLLNDPRGAALEAIVSRIKMISRNPEMKSSPLSHVRFLAVSATIPNIGDLAE-WLN 305
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYS+GKSA
Sbjct: 306 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSKGKSA 365
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 366 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 425
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDI+VICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 426 GYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 485
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCE VESQLLSCVTEHLT
Sbjct: 486 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCVTEHLT 545
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTI DI+KAIEW+KCSYLYVRMKKNP+KYAIRN I HNTEKHMEDICIEKVNEL
Sbjct: 546 AEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAIRNRISYHNTEKHMEDICIEKVNEL 605
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EALHIICHAEEI
Sbjct: 606 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEI 665
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRR EKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 666 AWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 725
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDM+SICSNGCRIAKCMKEYFVYRKNYKGTF+SMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 726 HDLSLSQDMSSICSNGCRIAKCMKEYFVYRKNYKGTFSSMLLAKSLYQKLWDDSPFLLKQ 785
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 786 LPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPEVDLKL 845
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EE EC RQGKAKLIVTLTRLPQ+YRP+KRHYADMIVG EEDNQILFHEKI SPYS
Sbjct: 846 EEAECGRQGKAKLIVTLTRLPQAYRPNKRHYADMIVGLEEDNQILFHEKIRVDEFSSPYS 905
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
A+VLV HPQ+GKLTIKADLIFDEYIGIDLHRKLQLMERNSNAR+KWGR+P SSF PPEE+
Sbjct: 906 AVVLVSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARSKWGRIPPSSFPPPEEV 965
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
Y+ID+DSEPLPQ A KE P+S DSN+LLDSMPSFNLLDEE +AEPA GNDEDECKIITE
Sbjct: 966 YIIDNDSEPLPQAAVKEPPKSCDSNSLLDSMPSFNLLDEEFEDAEPAAGNDEDECKIITE 1025
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIR+KAKSFPVL ASKN AYSPAPE YS TRN Q +E QVEALEEKQRNE SPH
Sbjct: 1026 RTVFDHIRKKAKSFPVLAASKNSAYSPAPETYSFTRNTQPLEFQVEALEEKQRNELSPHT 1085
Query: 961 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1020
V+SFSGFREE+GN++ TLQNH SG H DD KG EL LQTEESKII+TEETIFD IK
Sbjct: 1086 KVESFSGFREEVGNEFRTLQNHFPSGPHFMDDEKG--ELGLQTEESKIIITEETIFDDIK 1145
Query: 1021 RKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1080
RK NSFPVVSQ VNT G Y KLN+ SDAE+AS QMLSFDISMMKE KRPRP
Sbjct: 1146 RKGNSFPVVSQICVNTPGAYSKLNR--------ASDAEVASMQMLSFDISMMKENKRPRP 1205
Query: 1081 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
ASPNIS+TW+H SPPV++KK CCSLETATET EVDPFVGFKSVFSFL
Sbjct: 1206 ASPNISNTWNHPSPPVETKKNCCSLETATETSEVDPFVGFKSVFSFL 1235
BLAST of MS003127 vs. NCBI nr
Match:
KAG7033104.1 (DExH-box ATP-dependent RNA helicase DExH17, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 1946.0 bits (5040), Expect = 0.0e+00
Identity = 987/1128 (87.50%), Postives = 1029/1128 (91.22%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIH KGTLKSIY+APSKALVQEKLRDWNQ
Sbjct: 119 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQ 178
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETY+MK+IQEADIILTTPEKFDAVTRY IKDGGL FF DIALVL
Sbjct: 179 KFGSWGVSCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFGDIALVL 238
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMI+R+PEMKSSPLS VRFLAVSATIPNIGDL + +
Sbjct: 239 IDEVHLLNDPRGAALEAIVSRIKMISRNPEMKSSPLSHVRFLAVSATIPNIGDLAE-WLN 298
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSK M RCSNEFADVLMQYS+GKSA
Sbjct: 299 VPVQGVK---RFGEEMRPVKLTSKAMPLLK-----MISCLRRCSNEFADVLMQYSKGKSA 358
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 359 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 418
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDI+VICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 419 GYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 478
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCE VESQLLSCVTEHLT
Sbjct: 479 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCVTEHLT 538
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTI DI+KAIEW+KCSYLYVRMKKNP+KYAIRNGI HNTEKHMEDICIEKVNEL
Sbjct: 539 AEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAIRNGISYHNTEKHMEDICIEKVNEL 598
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EALHIICHAEEI
Sbjct: 599 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEI 658
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRR EKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 659 AWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 718
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTF+SMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 719 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFSSMLLAKSLYQKLWDDSPFLLKQ 778
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 779 LPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPEVDLKL 838
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI-------SPY 780
EE EC RQGKAKLIVTLTRLPQ+YRP+KRHYADMIVG EEDNQILFHEKI SPY
Sbjct: 839 EEAECGRQGKAKLIVTLTRLPQAYRPNKRHYADMIVGLEEDNQILFHEKISRVDEFSSPY 898
Query: 781 SAIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEE 840
SA+VLV HPQ+GKLTIKADLIFDEYIGIDLHRKLQLMERNSNAR+KWGR+P SSF PPEE
Sbjct: 899 SAVVLVSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARSKWGRIPPSSFPPPEE 958
Query: 841 LYVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIIT 900
+Y+ID+DSEPLPQ A KE P+S DSN+LLDSMPSFNLLDEE +AEPA GNDEDECKIIT
Sbjct: 959 VYIIDNDSEPLPQAAVKEPPKSCDSNSLLDSMPSFNLLDEEFEDAEPAAGNDEDECKIIT 1018
Query: 901 ERTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPH 960
ERTVFDHIR+KAKSFPVL ASKN AYSPAPE YS TRN Q +E QVEALEEKQRNE SPH
Sbjct: 1019 ERTVFDHIRKKAKSFPVLAASKNSAYSPAPETYSFTRNTQPLEFQVEALEEKQRNELSPH 1078
Query: 961 ANVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHI 1020
V+SFSGFREE+GN++ TLQNH SG H DD KG EL LQTEESKII+TEETIFD I
Sbjct: 1079 TKVESFSGFREEVGNEFRTLQNHFPSGPHFMDDEKG--ELGLQTEESKIIITEETIFDDI 1138
Query: 1021 KRKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPR 1080
KRK NSFPVVSQ VNT G Y KLN+ SDAE+AS QMLSFDISMMKE KRPR
Sbjct: 1139 KRKGNSFPVVSQICVNTPGAYSKLNR--------ASDAEVASMQMLSFDISMMKENKRPR 1198
Query: 1081 PASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
PASPNIS+TW+HQSPPV++KK CCSLETATETREVDPFVGFKSVFSFL
Sbjct: 1199 PASPNISNTWNHQSPPVETKKNCCSLETATETREVDPFVGFKSVFSFL 1226
BLAST of MS003127 vs. ExPASy Swiss-Prot
Match:
Q5D892 (DExH-box ATP-dependent RNA helicase DExH17 OS=Arabidopsis thaliana OX=3702 GN=MER3 PE=2 SV=1)
HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 718/1146 (62.65%), Postives = 852/1146 (74.35%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIA-EGKFIHVKGTLKSIYVAPSKALVQEKLRDWN 60
M+ISAPTGSGKTVLFELCILRL SK I+ EG F+H KG LK++Y++PSKALVQEKLRDWN
Sbjct: 43 MIISAPTGSGKTVLFELCILRLFSKSISKEGSFLHAKGALKTVYISPSKALVQEKLRDWN 102
Query: 61 QKFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALV 120
QKF SWG+SCLELTGDNETYS K IQ+ADIILTTPEKFDAV+RYR+ GGL FFSDIALV
Sbjct: 103 QKFNSWGISCLELTGDNETYSTKNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALV 162
Query: 121 LIDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYF 180
LIDEVHLLNDPRGAALEAIVSR+K+++ + E++SS L+ VR LAVSATIPNI DL + +
Sbjct: 163 LIDEVHLLNDPRGAALEAIVSRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAE-WL 222
Query: 181 RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKS 240
+V +G + RFGEEMRPVKLT+KVFGYA AKNDF+FEK R N D+LMQYS+GKS
Sbjct: 223 KVPTAGIK---RFGEEMRPVKLTTKVFGYAAAKNDFLFEK--RLQNYIYDILMQYSKGKS 282
Query: 241 ALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCG 300
ALVFCSTRKGAQEAAQ+L+QTAMT+GYSNPFIKS+EQLERLREAS CSDKQMQS IL G
Sbjct: 283 ALVFCSTRKGAQEAAQKLAQTAMTYGYSNPFIKSREQLERLREASPMCSDKQMQSYILQG 342
Query: 301 VGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLY 360
VGYHNGGLC KDR+L+E LFL GDIQVICTTNTLAHGINLPAHTV+IKSTQHFNKEKG Y
Sbjct: 343 VGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHY 402
Query: 361 MEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHL 420
MEYDRST+LQM GRAGRPPFDDTG+VIIMTRR+TVHLYENLLNGCE+VESQLL C+ EHL
Sbjct: 403 MEYDRSTLLQMSGRAGRPPFDDTGMVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHL 462
Query: 421 TAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNE 480
TAEIVQ+TI DI +AIEW+KCSYLYVRMKKNPE YAI+ GI EKH++++C++K+NE
Sbjct: 463 TAEIVQLTISDITRAIEWMKCSYLYVRMKKNPENYAIKKGIPKDRVEKHLQELCLQKINE 522
Query: 481 LSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEE 540
LS++QMIW D DGF+LKP +PGRLMTKYYLKF+TMK+I+ P + SLDEALHI+CHAEE
Sbjct: 523 LSQYQMIWTDTDGFVLKP-EEPGRLMTKYYLKFETMKYIINTPTSYSLDEALHIVCHAEE 582
Query: 541 IAWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPS 600
I+WIQLRRNEKK LNDVN DK+GRLRFHI KGK+KKRIQTREEK+F+LAND LTGDPS
Sbjct: 583 ISWIQLRRNEKKTLNDVNADKEGRLRFHINDNKGKRKKRIQTREEKLFVLANDWLTGDPS 642
Query: 601 IHDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLK 660
+HDLS++QD NSICSNG RIA+CMKEYF+Y+KNYKGT +S LLAKSLYQKLWDDSP+LLK
Sbjct: 643 VHDLSMTQDANSICSNGSRIARCMKEYFIYKKNYKGTLSSTLLAKSLYQKLWDDSPYLLK 702
Query: 661 QLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLK 720
QLPGIGMVTAKALHSMG++SFEALA+ADPR+IEIVTGRKYPFGN IKESLSSLPP V++K
Sbjct: 703 QLPGIGMVTAKALHSMGVRSFEALAEADPRRIEIVTGRKYPFGNTIKESLSSLPPKVEIK 762
Query: 721 LEEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPY 780
+EEV+C +QG +KL VTL+R+ Q + +KRHYAD+IVGSEE+N I FHEKI SPY
Sbjct: 763 VEEVDCQKQGISKLAVTLSRVSQPLQSTKRHYADLIVGSEEENLIHFHEKIRMEDFSSPY 822
Query: 781 SAIVLVPHP-QRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPE 840
S VL+ P Q+ K+T+KADLIF+EYIGIDLH L L + N+N N ++PP
Sbjct: 823 SVTVLLERPHQQTKVTVKADLIFEEYIGIDLHETLLLKKANNNKVNYKSENRMPQYYPPM 882
Query: 841 ELYVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEEL-GEAEPATGNDEDECKI 900
I DD P+ + + D MPSF L+D++ E EP +ED+C I
Sbjct: 883 ASACIADDDNPVTSGPSNRKDKK-------DDMPSFKLIDDDSEEEKEPYVTMEEDDCVI 942
Query: 901 ITERTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPS 960
I E TVFDHIREKAK FP L N SPA L R ++L E E
Sbjct: 943 INEHTVFDHIREKAKCFPSLN-PLNPTSSPASGKSILKR---------KSLVENNSPELD 1002
Query: 961 PHANVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFD 1020
P DS + + Q ITS + K E E ++ETIF+
Sbjct: 1003 PLFQYDSVFDLPTNTKDIKQSAQ-QITSPGYASFAEKTETERPF---------SDETIFN 1062
Query: 1021 HIKRKANSFPVVS----------------QFFVNTAGTYGKLNQPSRDSSLSLSDAELAS 1080
+I++++ + P ++ ++ TYG L P+ SD A
Sbjct: 1063 YIRKRSKNSPALATSKIENPITISSQEGRNAEISPYRTYGLLVSPATKIPRITSD---AP 1122
Query: 1081 AQMLSFDISMMKEKKRPRPASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFK 1122
+++LSFDISM+K + ST + +S DS F+GFK
Sbjct: 1123 SEILSFDISMVKRSDTSLEQTKGFCSTLAGKSNVSDS------------------FLGFK 1133
BLAST of MS003127 vs. ExPASy Swiss-Prot
Match:
B6DMK2 (ATP-dependent DNA helicase MER3 homolog OS=Oryza sativa subsp. japonica OX=39947 GN=MER3 PE=2 SV=1)
HSP 1 Score: 1196.4 bits (3094), Expect = 0.0e+00
Identity = 613/964 (63.59%), Postives = 746/964 (77.39%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFI-AEGKFIHVKGTLKSIYVAPSKALVQEKLRDWN 60
MVISAPTGSGKTVLFELCILRLLS+F+ +E +F +KGTLK+IY+AP KALVQEKLRDWN
Sbjct: 50 MVISAPTGSGKTVLFELCILRLLSRFLSSEWRFNLIKGTLKTIYIAPMKALVQEKLRDWN 109
Query: 61 QKFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALV 120
K GS G+SCLE+TGDNE Y+ K I +AD+ILTTPEKFD+V+R+ I+DGGL FFSDIALV
Sbjct: 110 MKLGSLGISCLEMTGDNEFYNTKSIHDADLILTTPEKFDSVSRHGIRDGGLGFFSDIALV 169
Query: 121 LIDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYF 180
LIDEVHLLNDPRGAALEAIVSRIKM++R MK +PL+ VRF+AVSATIPNI D+ + +
Sbjct: 170 LIDEVHLLNDPRGAALEAIVSRIKMLSRLGTMKIAPLANVRFIAVSATIPNIEDIAE-WL 229
Query: 181 RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKS 240
V G + RFGEEMRPVKLT+KVFGYAPA+NDF+FE+ R + D+LMQ+SRGKS
Sbjct: 230 AVPSEGIK---RFGEEMRPVKLTTKVFGYAPARNDFLFER--RLQSFIFDILMQHSRGKS 289
Query: 241 ALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCG 300
ALVFCSTRKGAQEAAQ LSQTA + GYSNPF+KS +Q E L+EA+L+CSDKQ+Q+ ++ G
Sbjct: 290 ALVFCSTRKGAQEAAQCLSQTASSLGYSNPFMKSMQQYEHLKEAALTCSDKQLQACLVHG 349
Query: 301 VGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLY 360
VGYHNGGLCLKDR+++E LFLKGDIQ++CTTNTLAHGINLPAHTV+IKSTQ FNKEKGLY
Sbjct: 350 VGYHNGGLCLKDRSVVEGLFLKGDIQILCTTNTLAHGINLPAHTVVIKSTQFFNKEKGLY 409
Query: 361 MEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHL 420
+EY+RS +LQMCGRAGRPPFDDTG +IIMTRR+TVHLYENLLNGCE+VESQLL C EHL
Sbjct: 410 VEYERSMVLQMCGRAGRPPFDDTGTIIIMTRRETVHLYENLLNGCEMVESQLLPCAVEHL 469
Query: 421 TAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNE 480
AEIVQ+T+ DI AIEW+KCSYLY+R+KKNP+ Y I+ I EK M+DIC+EK++E
Sbjct: 470 NAEIVQLTVSDITLAIEWLKCSYLYIRIKKNPQHYGIKKEIPRELLEKQMKDICVEKIHE 529
Query: 481 LSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEE 540
L + +IW DEDGFLLKPL +PGRLMTK+YLKFDTMK I++A C+L++ LHIICH+ E
Sbjct: 530 LGEYGLIWTDEDGFLLKPL-EPGRLMTKFYLKFDTMKLIVKASACCTLEDLLHIICHSAE 589
Query: 541 IAWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPS 600
I WIQLRRNEKKLLN++N DK+GRL FH++G GK+KKRIQTREEKIFILANDCLTGDP
Sbjct: 590 ITWIQLRRNEKKLLNEINADKEGRLWFHVVGANGKRKKRIQTREEKIFILANDCLTGDPL 649
Query: 601 IHDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLK 660
+HDLSL+Q+MNSICSNGCR+AKCM+EYF+Y+KNYK +SMLLAK L+QKLW+ SPFLLK
Sbjct: 650 VHDLSLNQEMNSICSNGCRVAKCMREYFIYKKNYKSAISSMLLAKCLHQKLWESSPFLLK 709
Query: 661 QLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLK 720
QLPGIG+VTAKAL + GI SFE+LA AD RKIE VTGR YPFG+ IK L SL P +D+
Sbjct: 710 QLPGIGIVTAKALKTAGIDSFESLATADARKIESVTGRNYPFGDSIKSYLPSLGPKIDIN 769
Query: 721 LEEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPY 780
+E+ RQGK+ +IVTLTRL Q+ SK++YADM+VGSEEDN ILFHEKI SPY
Sbjct: 770 IEDAG-NRQGKSTIIVTLTRLSQAVGSSKQNYADMVVGSEEDNAILFHEKIKTQEFSSPY 829
Query: 781 SAIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWG------------ 840
S + VP P + T+K D+IF+EY+G+D+H+K + + + +G
Sbjct: 830 SVKLYVPCPPNARATLKVDVIFEEYVGLDIHKKHVVSREDFHVTKVFGIKKAEPLYNLPA 889
Query: 841 ----------RMPSSSFHP-----PEELYVIDDD---SEPLPQDATKELPRSADSNALLD 900
R S +H +E+ VI+DD P D E+ + + N L
Sbjct: 890 ESCLVSSKTTRTNQSKYHNGQNPLSKEVCVIEDDFRAKAPDKDDNDLEILGTREYNNLAS 949
Query: 901 -SMPSFNLLDEELGEAEP---ATGNDEDECKIITERTVFDHIREKAKSFP--VLGASKNR 922
PSF LL EE E P A+ E ECK T T+FDHIR+K++ FP +L S +
Sbjct: 950 LEAPSFTLLHEEDYEDVPDVLASEPVEAECKSATNNTIFDHIRKKSRDFPNLMLSKSMDS 1005
BLAST of MS003127 vs. ExPASy Swiss-Prot
Match:
A2RUV5 (Probable ATP-dependent DNA helicase HFM1 OS=Xenopus tropicalis OX=8364 GN=hfm1 PE=2 SV=1)
HSP 1 Score: 510.8 bits (1314), Expect = 4.0e-143
Identity = 306/836 (36.60%), Postives = 483/836 (57.78%), Query Frame = 0
Query: 2 VISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQK 61
V+ APTGSGKTV+FEL I+RLL + +K +Y+AP KAL ++ DW K
Sbjct: 169 VLCAPTGSGKTVIFELAIIRLLMQVPMPWT------NVKIVYMAPIKALCGQRYDDWKAK 228
Query: 62 FGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVLI 121
FG G++C ELTGD E + IQ A II+TTPEK+D++TR + KD L + L LI
Sbjct: 229 FGPVGLNCKELTGDTEMDDLFEIQHAHIIMTTPEKWDSMTR-KWKDNTL--VQLVRLFLI 288
Query: 122 DEVHLLNDP-RGAALEAIVSRIKMIARSPEMKS--SPLSQVRFLAVSATIPNIGDLGKFY 181
DEVH+L + RGA LE +VSR+K I + +RF+AVSATIPN+ D+ +
Sbjct: 289 DEVHILKEENRGATLEVVVSRMKTIYSLSHLSEDRKAFIPMRFVAVSATIPNVEDIADWL 348
Query: 182 FRVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGK 241
+ G ++ E RPVKL V G+ + F+ + + A+++ YS G+
Sbjct: 349 SDENSPG--VCMKMDESSRPVKLRKVVLGFPCSTKQSEFKFDLTLNYKIANIIQTYSDGR 408
Query: 242 SALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILC 301
LVFCSTRKG Q+AA L++ A F+ S E +RL++ + S D +++ +
Sbjct: 409 PTLVFCSTRKGVQQAASILTKDA-------KFVMSIEHKQRLQKCANSIKDSKLRDVLQY 468
Query: 302 GVGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGL 361
GVGYH+ G+ + DR +IE+ FL GD+ V+ TT+TLA G+NLPAH VI+KST H+ G+
Sbjct: 469 GVGYHHAGVDISDRKVIENSFLIGDLPVLFTTSTLAMGVNLPAHLVIVKSTMHY--VSGM 528
Query: 362 YMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEH 421
+ EY + ILQM GRAGRP FD T +IMTR T Y ++L+G + +ES L + EH
Sbjct: 529 FQEYSETDILQMIGRAGRPQFDSTATAVIMTRLSTKEKYVHMLDGADTIESSLHKHLVEH 588
Query: 422 LTAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVN 481
L AEI TI D+ A+EWI+ ++LY+R KNP Y G+ E ++++C++ +N
Sbjct: 589 LNAEIALHTITDVKVALEWIRSTFLYIRALKNPAYYGFSEGLDKIGIEAKLQELCLKNLN 648
Query: 482 ELSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMK--HIMQAPENCSLDEALHIICH 541
+LS +I MDE+ KP + G+LM YY+ F+T K H ++ E +L E + +I
Sbjct: 649 DLSSLGLIKMDEE-INFKP-TETGKLMALYYIAFNTAKLFHTIRGTE--TLAELVSLISS 708
Query: 542 AEEIAWIQLRRNEKKLLNDVNNDKDG-RLRFHILGEKGKKKKRIQTREEKIFILANDCLT 601
E + +QLR NE+++LN +N DK+ +R+ + G +I+T+E K+ L L
Sbjct: 709 CSEFSDVQLRANERRVLNTLNKDKNRVTIRYPMEG-------KIKTKEMKVNCLIQAHL- 768
Query: 602 GDPSIHDLSLSQDMNSICSNGCRIAKCMKEYFVYRKN-YKGTFNSMLLAKSLYQKLWDDS 661
G + D SL+QD++ I +G R+AKC+ E+ ++N + N+++L K KLW++S
Sbjct: 769 GCILVQDFSLTQDISKIFRHGTRLAKCLSEFLALQENKFSAFLNALILTKCFKSKLWENS 828
Query: 662 PFLLKQLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPP 721
+ KQL IG+ A A+ + G+ +F+ + D + R++E++ R PFGN IKES++ LP
Sbjct: 829 SHISKQLEKIGVTLANAMVNAGLTTFKKIEDTNARELELIVNRHPPFGNQIKESVAHLPK 888
Query: 722 GVDLKLEEVECPRQGKAKLIVTL-----TRLPQSYRPSKRHYADMIVGSEEDNQILFHEK 781
++K +++ R A++++T+ +L + H+ +++G ++DNQ +F +K
Sbjct: 889 -YEIKFQQLAKYRATTAEVVLTVLLTNFKQLQKKRTAPDSHFVMLVIG-DDDNQAIFKQK 948
Query: 782 ISPYSAIVLVPHPQRGKL-------TIKADLIFDEYIGIDLHRKLQLMERNSNARN 819
I S ++ ++ + +LI EY+G+D+ + + S++ N
Sbjct: 949 IMDSSLFKTGSWTRKIEIKRASKSTNVCLNLISSEYVGLDIQQSFNICYLGSDSFN 970
BLAST of MS003127 vs. ExPASy Swiss-Prot
Match:
D3Z4R1 (Probable ATP-dependent DNA helicase HFM1 OS=Mus musculus OX=10090 GN=Hfm1 PE=3 SV=2)
HSP 1 Score: 495.4 bits (1274), Expect = 1.7e-138
Identity = 313/826 (37.89%), Postives = 475/826 (57.51%), Query Frame = 0
Query: 2 VISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQK 61
VI APTGSGKTV+FEL I RLL + +K +Y+AP KAL ++ DW +K
Sbjct: 299 VICAPTGSGKTVVFELAITRLLMEVPLPWL------NMKIVYMAPIKALCSQRFDDWKEK 358
Query: 62 FGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVLI 121
FG G++C ELTGD + IQ A+II+TTPEK+D+VTR + +D SF + L LI
Sbjct: 359 FGPVGLNCKELTGDTVMDDLFEIQHANIIITTPEKWDSVTR-KWRDN--SFIQLVRLFLI 418
Query: 122 DEVHLLNDP-RGAALEAIVSRIKMI-ARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYF 181
DEVH++ D RG LE +VSR+K + + S +++S+ VRF+AVSATIPN D+ ++
Sbjct: 419 DEVHVIKDENRGPTLEVVVSRMKTVQSLSRDLESASPVPVRFVAVSATIPNAEDIAEWLS 478
Query: 182 ---RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSR 241
R ++ ++ E RPVKL V G+ + + F+ + + V+ YS
Sbjct: 479 DGERPAVC-----LKMDESHRPVKLQKVVLGFPCSSSQTEFKFDLALNYKVYSVIRTYSD 538
Query: 242 GKSALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNI 301
K LVFCSTRKG Q+AA L + A FI S EQ RL++++ S D +++ +
Sbjct: 539 QKPTLVFCSTRKGVQQAASVLVKDA-------KFIISVEQKLRLQKSAYSIRDSKLKDTL 598
Query: 302 LCGVGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEK 361
+ GVGYH+ G+ L DR L+E LF GD+ V+ TT+TLA G+N+PAH V+IKST H++
Sbjct: 599 VYGVGYHHAGMELSDRKLVEGLFTSGDLPVLFTTSTLAMGMNMPAHLVVIKSTMHYS--G 658
Query: 362 GLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVT 421
G++ EY + ILQM GRAGRP FD T +IMTR T Y +L + VES L +
Sbjct: 659 GVFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTREKYVQMLACNDTVESSLHRHLI 718
Query: 422 EHLTAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEK 481
EHL AEIV TI D+ A++WI+ + LY+R KNP Y +G+ E ++++C++
Sbjct: 719 EHLNAEIVLHTITDVNIALDWIRSTMLYIRALKNPSHYGFSSGLNKDGIEAKLQELCLKN 778
Query: 482 VNELSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICH 541
+ +LS +I MDED KP + GRLM YY+ F+T+K +L + + +I
Sbjct: 779 LKDLSSLDLIKMDED-VNFKP-TEAGRLMAWYYITFETVKKFCAISGKETLLDLISMISS 838
Query: 542 AEEIAWIQLRRNEKKLLNDVNNDKDG-RLRFHILGEKGKKKKRIQTREEKIFILANDCLT 601
E +QLR +EK++LN +N D + +RF + +RI+TRE K+ L L
Sbjct: 839 CNEFLDVQLRISEKRILNTLNKDPNRITIRFPM-------AERIKTREMKVNCLIQAQL- 898
Query: 602 GDPSIHDLSLSQDMNSICSNGCRIAKCMKEYF-VYRKNYKGTFNSMLLAKSLYQKLWDDS 661
G I D +L+QD I NG RIA+ + ++ K + NS++L K KLW++S
Sbjct: 899 GCIPIQDFALTQDTVKIFRNGSRIARWLSDFVAAQEKKFAVLLNSVILTKCFKCKLWENS 958
Query: 662 PFLLKQLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPP 721
+ KQL IG+ + + + G+ SF+ + +A+ R++E++ R PFG IKE+++ LP
Sbjct: 959 KHVSKQLDKIGISLSNTMVNAGLTSFKKIEEANARELELILNRHPPFGTQIKEAVAHLPK 1018
Query: 722 GVDLKLEEVECPRQGKAKLIVTLTRLPQSYRPSKR-----HYADMIVGSEEDNQILFHEK 781
+L++E++ KA+++VT+ +KR HYA +I+G + DNQ++F K
Sbjct: 1019 -YELEVEQIARYSDIKAEILVTIILRNFEQLQTKRTAPDFHYATLIIG-DADNQVVFKHK 1078
Query: 782 ISPYSAIVLVPHPQRGKLTIK---------ADLIFDEYIGIDLHRK 807
I +++L K+ +K +LI +Y+G+D+H+K
Sbjct: 1079 I--MDSVLLKSGNWVKKIDVKRALISEDLSINLISSDYVGLDIHQK 1087
BLAST of MS003127 vs. ExPASy Swiss-Prot
Match:
A2PYH4 (Probable ATP-dependent DNA helicase HFM1 OS=Homo sapiens OX=9606 GN=HFM1 PE=2 SV=2)
HSP 1 Score: 488.4 bits (1256), Expect = 2.1e-136
Identity = 311/828 (37.56%), Postives = 464/828 (56.04%), Query Frame = 0
Query: 2 VISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQK 61
VI APTGSGKTV+FEL I RLL + +K +Y+AP KAL ++ DW +K
Sbjct: 300 VICAPTGSGKTVVFELAITRLLMEVPLPWL------NIKIVYMAPIKALCSQRFDDWKEK 359
Query: 62 FGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVLI 121
FG G++C ELTGD + IQ A II+TTPEK+D++TR + +D S + L LI
Sbjct: 360 FGPIGLNCKELTGDTVMDDLFEIQHAHIIMTTPEKWDSMTR-KWRDN--SLVQLVRLFLI 419
Query: 122 DEVHLLNDP-RGAALEAIVSRIKMIARSPE--MKSSPLSQVRFLAVSATIPNIGDLGKFY 181
DEVH++ D RG LE +VSR+K + + +S +RF+AVSATIPN D+ ++
Sbjct: 420 DEVHIVKDENRGPTLEVVVSRMKTVQSVSQTLKNTSTAIPMRFVAVSATIPNAEDIAEWL 479
Query: 182 F---RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYS 241
R ++ ++ E RPVKL V G+ + N F+ + + A V+ YS
Sbjct: 480 SDGERPAVC-----LKMDESHRPVKLQKVVLGFPCSSNQTEFKFDLTLNYKIASVIQMYS 539
Query: 242 RGKSALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSN 301
K LVFC+TRKG Q+AA L + A FI + EQ +RL++ + S D +++
Sbjct: 540 DQKPTLVFCATRKGVQQAASVLVKDA-------KFIMTVEQKQRLQKYAYSVRDSKLRDI 599
Query: 302 ILCGVGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKE 361
+ G YH+ G+ L DR ++E F GD+ V+ TT+TLA G+NLPAH V+IKST H+
Sbjct: 600 LKDGAAYHHAGMELSDRKVVEGAFTVGDLPVLFTTSTLAMGVNLPAHLVVIKSTMHY--A 659
Query: 362 KGLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCV 421
GL+ EY + ILQM GRAGRP FD T +IMTR T Y +L + VES L +
Sbjct: 660 GGLFEEYSETDILQMIGRAGRPQFDTTATAVIMTRLSTRDKYIQMLACRDTVESSLHRHL 719
Query: 422 TEHLTAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIE 481
EHL AEIV TI D+ A+EWI+ + LY+R KNP Y +G+ E ++++C++
Sbjct: 720 IEHLNAEIVLHTITDVNIAVEWIRSTLLYIRALKNPSHYGFASGLNKDGIEAKLQELCLK 779
Query: 482 KVNELSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIIC 541
+N+LS +I MDE G KP + GRLM YY+ F+T+K +L + + +I
Sbjct: 780 NLNDLSSLDLIKMDE-GVNFKP-TEAGRLMAWYYITFETVKKFYTISGKETLSDLVTLIA 839
Query: 542 HAEEIAWIQLRRNEKKLLNDVNNDKDG-RLRFHILGEKGKKKKRIQTREEKIFILANDCL 601
+E IQLR NEKK LN +N D + +RF + G RI+TRE K+ L L
Sbjct: 840 GCKEFLDIQLRINEKKTLNTLNKDPNRITIRFPMEG-------RIKTREMKVNCLIQAQL 899
Query: 602 TGDPSIHDLSLSQDMNSICSNGCRIAKCMKEYF-VYRKNYKGTFNSMLLAKSLYQKLWDD 661
G I D +L+QD I +G RI + + ++ K + NS++LAK KLW++
Sbjct: 900 -GCIPIQDFALTQDTAKIFRHGSRITRWLSDFVAAQEKKFAVLLNSLILAKCFRCKLWEN 959
Query: 662 SPFLLKQLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLP 721
S + KQL IG+ + A+ + G+ SF+ + + D R++E++ R PFG IKE++ LP
Sbjct: 960 SLHVSKQLEKIGITLSNAIVNAGLTSFKKIEETDARELELILNRHPPFGTQIKETVMYLP 1019
Query: 722 PGVDLKLEEVECPRQGKAKLIVTL-----TRLPQSYRPSKRHYADMIVGSEEDNQILFHE 781
+LK+E++ A+++VT+ +L S HY +I+G + DNQ+++
Sbjct: 1020 K-YELKVEQITRYSDTTAEILVTVILRNFEQLQTKRTASDSHYVTLIIG-DADNQVVYLH 1079
Query: 782 KISPYSAIVLVPHPQRGKLTIK---------ADLIFDEYIGIDLHRKL 808
KI+ +++L K+ +K +LI E++G+D+ +KL
Sbjct: 1080 KIT--DSVLLKAGSWAKKIAVKRALKSEDLSINLISSEFVGLDIQQKL 1090
BLAST of MS003127 vs. ExPASy TrEMBL
Match:
A0A6J1BXS3 (DExH-box ATP-dependent RNA helicase DExH17 OS=Momordica charantia OX=3673 GN=LOC111006677 PE=4 SV=1)
HSP 1 Score: 2162.5 bits (5602), Expect = 0.0e+00
Identity = 1094/1127 (97.07%), Postives = 1101/1127 (97.69%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ
Sbjct: 44 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 103
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL
Sbjct: 104 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 163
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDL + + +
Sbjct: 164 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLAE-WLK 223
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYSRGKSA
Sbjct: 224 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSRGKSA 283
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 284 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 343
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 344 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 403
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT
Sbjct: 404 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 463
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL
Sbjct: 464 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 523
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI
Sbjct: 524 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 583
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 584 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 643
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLL+KSLYQKLWDDSPFLLKQ
Sbjct: 644 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLSKSLYQKLWDDSPFLLKQ 703
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL
Sbjct: 704 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 763
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EEVECPRQGKAKLIVTLTRLPQSYRPSK+HYADMIVGSEEDNQILFHEKI SPYS
Sbjct: 764 EEVECPRQGKAKLIVTLTRLPQSYRPSKQHYADMIVGSEEDNQILFHEKIRVDEFSSPYS 823
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL
Sbjct: 824 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 883
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE
Sbjct: 884 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 943
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIREKAKSFPVLGASKNRAY PAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA
Sbjct: 944 RTVFDHIREKAKSFPVLGASKNRAYLPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 1003
Query: 961 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1020
NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK
Sbjct: 1004 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1063
Query: 1021 RKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1080
RKANSFPVVSQF VNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP
Sbjct: 1064 RKANSFPVVSQFCVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1123
Query: 1081 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL
Sbjct: 1124 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1163
BLAST of MS003127 vs. ExPASy TrEMBL
Match:
A0A6J1JLJ9 (DExH-box ATP-dependent RNA helicase DExH17 OS=Cucurbita maxima OX=3661 GN=LOC111486976 PE=4 SV=1)
HSP 1 Score: 1960.3 bits (5077), Expect = 0.0e+00
Identity = 992/1127 (88.02%), Postives = 1035/1127 (91.84%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIH KGTLKSIY+APSKALVQEKLRDWNQ
Sbjct: 119 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQ 178
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGV CLELTGDNETY+MK+IQEADIILTTPEKFDAVTRY IKDGGL FFSDIALVL
Sbjct: 179 KFGSWGVCCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFSDIALVL 238
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMI+R+PEMKSSPLS VRFLAVSATIPNIGDL +
Sbjct: 239 IDEVHLLNDPRGAALEAIVSRIKMISRNPEMKSSPLSHVRFLAVSATIPNIGDLAD-WLN 298
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYS+GKSA
Sbjct: 299 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSKGKSA 358
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 359 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 418
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDI+VICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 419 GYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 478
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCE VESQLLSC+TEHLT
Sbjct: 479 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCLTEHLT 538
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTI DI+KAIEW+KCSYLYVRMKKNP+KYAIRNGI NTEKHMEDICIEKVN+L
Sbjct: 539 AEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAIRNGISYQNTEKHMEDICIEKVNDL 598
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EALHIICHAEEI
Sbjct: 599 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEI 658
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRR EKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 659 AWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 718
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYF+YRKNYKGTF+SMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 719 HDLSLSQDMNSICSNGCRIAKCMKEYFLYRKNYKGTFSSMLLAKSLYQKLWDDSPFLLKQ 778
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 779 LPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPVVDLKL 838
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EE EC RQGKAKLIVTLTRLPQ+YRP+KRHYADMIVG EEDNQILFHEKI SPYS
Sbjct: 839 EEAECGRQGKAKLIVTLTRLPQAYRPNKRHYADMIVGLEEDNQILFHEKIRVDEFSSPYS 898
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
A+VLV HPQ+GKLTIKADLIFDEYIGIDLHRKLQLMERNSNAR+KWGR P SSF PPEE+
Sbjct: 899 AVVLVSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARSKWGRTPPSSFPPPEEV 958
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
Y+ID+DSEPLPQ A KE P+S DSN+LLDSMPSFNLLDEE +AEPATGNDEDECKIITE
Sbjct: 959 YIIDNDSEPLPQAAVKEPPKSGDSNSLLDSMPSFNLLDEEFEDAEPATGNDEDECKIITE 1018
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIR+KAKSFPVL ASKN AYSPAPE YS TRN Q +E QVEALEEKQRNE SPH
Sbjct: 1019 RTVFDHIRKKAKSFPVLAASKNSAYSPAPETYSFTRNTQPLEFQVEALEEKQRNELSPHT 1078
Query: 961 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1020
V+SFSGFREE+GN++ TLQNH TSG H D KG EL LQTEESKII+TEETIFD IK
Sbjct: 1079 EVESFSGFREEVGNEFPTLQNHFTSGPHFMDGEKG--ELGLQTEESKIIITEETIFDDIK 1138
Query: 1021 RKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1080
RK NSFPVVSQ VNT G Y KLN+ SDAE+AS QML FDISMMKE KRPRP
Sbjct: 1139 RKGNSFPVVSQICVNTPGAYSKLNR--------ASDAEVASMQMLCFDISMMKENKRPRP 1198
Query: 1081 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
ASPNIS+TW+HQSPPV++KK CCSLETATETREVDPFVGFKSVFSFL
Sbjct: 1199 ASPNISNTWNHQSPPVETKKNCCSLETATETREVDPFVGFKSVFSFL 1228
BLAST of MS003127 vs. ExPASy TrEMBL
Match:
A0A6J1HE00 (DExH-box ATP-dependent RNA helicase DExH17 OS=Cucurbita moschata OX=3662 GN=LOC111462693 PE=4 SV=1)
HSP 1 Score: 1960.3 bits (5077), Expect = 0.0e+00
Identity = 992/1127 (88.02%), Postives = 1035/1127 (91.84%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIH KGTLKSIY+APSKALVQEKLRDWNQ
Sbjct: 126 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHEKGTLKSIYIAPSKALVQEKLRDWNQ 185
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETY+MK+IQEADIILTTPEKFDAVTRY IKDGGL FF DIALVL
Sbjct: 186 KFGSWGVSCLELTGDNETYNMKHIQEADIILTTPEKFDAVTRYHIKDGGLGFFGDIALVL 245
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMI+R+PEMKSSPLS VRFLAVSATIPNIGDL + +
Sbjct: 246 IDEVHLLNDPRGAALEAIVSRIKMISRNPEMKSSPLSHVRFLAVSATIPNIGDLAE-WLN 305
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYS+GKSA
Sbjct: 306 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSKGKSA 365
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 366 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 425
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDI+VICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 426 GYHNGGLCLKDRNLIESLFLKGDIRVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 485
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCE VESQLLSCVTEHLT
Sbjct: 486 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCETVESQLLSCVTEHLT 545
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTI DI+KAIEW+KCSYLYVRMKKNP+KYAIRN I HNTEKHMEDICIEKVNEL
Sbjct: 546 AEIVQMTISDIVKAIEWMKCSYLYVRMKKNPQKYAIRNRISYHNTEKHMEDICIEKVNEL 605
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EALHIICHAEEI
Sbjct: 606 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALHIICHAEEI 665
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
AWIQLRR EKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI
Sbjct: 666 AWIQLRRTEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 725
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDM+SICSNGCRIAKCMKEYFVYRKNYKGTF+SMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 726 HDLSLSQDMSSICSNGCRIAKCMKEYFVYRKNYKGTFSSMLLAKSLYQKLWDDSPFLLKQ 785
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 786 LPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPEVDLKL 845
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EE EC RQGKAKLIVTLTRLPQ+YRP+KRHYADMIVG EEDNQILFHEKI SPYS
Sbjct: 846 EEAECGRQGKAKLIVTLTRLPQAYRPNKRHYADMIVGLEEDNQILFHEKIRVDEFSSPYS 905
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
A+VLV HPQ+GKLTIKADLIFDEYIGIDLHRKLQLMERNSNAR+KWGR+P SSF PPEE+
Sbjct: 906 AVVLVSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARSKWGRIPPSSFPPPEEV 965
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
Y+ID+DSEPLPQ A KE P+S DSN+LLDSMPSFNLLDEE +AEPA GNDEDECKIITE
Sbjct: 966 YIIDNDSEPLPQAAVKEPPKSCDSNSLLDSMPSFNLLDEEFEDAEPAAGNDEDECKIITE 1025
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIR+KAKSFPVL ASKN AYSPAPE YS TRN Q +E QVEALEEKQRNE SPH
Sbjct: 1026 RTVFDHIRKKAKSFPVLAASKNSAYSPAPETYSFTRNTQPLEFQVEALEEKQRNELSPHT 1085
Query: 961 NVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHIK 1020
V+SFSGFREE+GN++ TLQNH SG H DD KG EL LQTEESKII+TEETIFD IK
Sbjct: 1086 KVESFSGFREEVGNEFRTLQNHFPSGPHFMDDEKG--ELGLQTEESKIIITEETIFDDIK 1145
Query: 1021 RKANSFPVVSQFFVNTAGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKEKKRPRP 1080
RK NSFPVVSQ VNT G Y KLN+ SDAE+AS QMLSFDISMMKE KRPRP
Sbjct: 1146 RKGNSFPVVSQICVNTPGAYSKLNR--------ASDAEVASMQMLSFDISMMKENKRPRP 1205
Query: 1081 ASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
ASPNIS+TW+H SPPV++KK CCSLETATET EVDPFVGFKSVFSFL
Sbjct: 1206 ASPNISNTWNHPSPPVETKKNCCSLETATETSEVDPFVGFKSVFSFL 1235
BLAST of MS003127 vs. ExPASy TrEMBL
Match:
A0A0A0KSF5 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523170 PE=4 SV=1)
HSP 1 Score: 1863.6 bits (4826), Expect = 0.0e+00
Identity = 963/1139 (84.55%), Postives = 1017/1139 (89.29%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLS FI EGKFIHVKGTLKSIY+APSKALVQEK+RDWNQ
Sbjct: 1 MVISAPTGSGKTVLFELCILRLLSNFIVEGKFIHVKGTLKSIYIAPSKALVQEKVRDWNQ 60
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETY++KYIQEADIILTTPEKFDAVTRYRIKDGGL FFSDIALVL
Sbjct: 61 KFGSWGVSCLELTGDNETYNVKYIQEADIILTTPEKFDAVTRYRIKDGGLGFFSDIALVL 120
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGAALEAIVSRIKMIAR+PEMKSSPLS+VRFLAVSATIPNIGDL + +
Sbjct: 121 IDEVHLLNDPRGAALEAIVSRIKMIARNPEMKSSPLSRVRFLAVSATIPNIGDLAE-WLS 180
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYSRGKSA
Sbjct: 181 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSRGKSA 240
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 300
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT
Sbjct: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTIPDIIKAIEW+KCSYL+VRMKKNP+KYAIRNGI NHN EKHMEDICIEKVNEL
Sbjct: 421 AEIVQMTIPDIIKAIEWMKCSYLFVRMKKNPQKYAIRNGIPNHNMEKHMEDICIEKVNEL 480
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EAL IICHAEEI
Sbjct: 481 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALRIICHAEEI 540
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
+WIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDP I
Sbjct: 541 SWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPLI 600
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGT+NSMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTYNSMLLAKSLYQKLWDDSPFLLKQ 660
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGI+SFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 661 LPGIGMVTAKALHSMGIESFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPKVDLKL 720
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EE ECP+QGKAKLIVTLTRLPQSYRP+KRHYA+MIVGSEEDNQILFHEKI SPYS
Sbjct: 721 EEAECPKQGKAKLIVTLTRLPQSYRPNKRHYAEMIVGSEEDNQILFHEKIRVDEFSSPYS 780
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
+ L+ HPQ+GKLTIKADLIFDEYIGIDLHRKLQLME+N N RNKWG+MP SS HPPEE+
Sbjct: 781 TVALISHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGKMPPSS-HPPEEV 840
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
VIDDDSEP PQ AT ELP S D N LLDSMPSFNLLDE+L EA+PATG DEDECKIITE
Sbjct: 841 CVIDDDSEPPPQAATDELPISGDLNPLLDSMPSFNLLDEDLEEADPATGKDEDECKIITE 900
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIREKAKSFP+L ASKN A+SPA YSLT+N Q +ELQVEALEEKQR E SPHA
Sbjct: 901 RTVFDHIREKAKSFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKQRIELSPHA 960
Query: 961 NVDSFSGFREEL-GNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHI 1020
VDSFSGFR+E+ N+Y+TLQ+HITSG DD+KG E +Q E SKIIVTEETIFDHI
Sbjct: 961 KVDSFSGFRDEVRNNEYVTLQSHITSGPRFIDDDKG--ESGVQREGSKIIVTEETIFDHI 1020
Query: 1021 KRKANSFPVVSQFFVNT-----AGTYGKLNQPSRDSSLSLSDAELASAQMLSFDISMMKE 1080
KRK+N+FPV+ + N Y K+N+ + S M+ FDISMMKE
Sbjct: 1021 KRKSNNFPVIHKSSENERTGEGGDRYRKMNE----------GCSVESMGMVCFDISMMKE 1080
Query: 1081 KKRPR---PASPNI-SSTW--SHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFSFL 1122
KR R +S N+ SS W QSP V+++KK SL+TATETREVDPFV FKSVFSFL
Sbjct: 1081 NKRARAGPESSTNMNSSKWKKQQQSPSVENRKKWRSLQTATETREVDPFVAFKSVFSFL 1119
BLAST of MS003127 vs. ExPASy TrEMBL
Match:
A0A1S3C985 (DExH-box ATP-dependent RNA helicase DExH17 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498091 PE=4 SV=1)
HSP 1 Score: 1860.9 bits (4819), Expect = 0.0e+00
Identity = 960/1142 (84.06%), Postives = 1013/1142 (88.70%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
MVISAPTGSGKTVLFELCILRLLS FI EGKFIHVKGTLKSIY+APSKALVQEK+RDWNQ
Sbjct: 43 MVISAPTGSGKTVLFELCILRLLSNFIVEGKFIHVKGTLKSIYIAPSKALVQEKVRDWNQ 102
Query: 61 KFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALVL 120
KFGSWGVSCLELTGDNETY++KYIQEADIILTTPEKFDAVTRYRIKDGGL FFSDIALVL
Sbjct: 103 KFGSWGVSCLELTGDNETYNVKYIQEADIILTTPEKFDAVTRYRIKDGGLGFFSDIALVL 162
Query: 121 IDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYFR 180
IDEVHLLNDPRGA LEAIVSRIKMIAR+PEMKSSPLS VRFLAVSATIPNIGDL + +
Sbjct: 163 IDEVHLLNDPRGAVLEAIVSRIKMIARNPEMKSSPLSHVRFLAVSATIPNIGDLAE-WLN 222
Query: 181 VSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKSA 240
V + G + RFGEEMRPVKLTSKVFGYAPAKNDFMFEK R N DVLMQYSRGKSA
Sbjct: 223 VPVQGVK---RFGEEMRPVKLTSKVFGYAPAKNDFMFEK--RLQNYIFDVLMQYSRGKSA 282
Query: 241 LVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCGV 300
LVFCSTRKGAQEAAQRLSQ AMT+GYSNPFIKSKEQLERLREASLSCSDKQMQSNIL GV
Sbjct: 283 LVFCSTRKGAQEAAQRLSQAAMTYGYSNPFIKSKEQLERLREASLSCSDKQMQSNILYGV 342
Query: 301 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 360
GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM
Sbjct: 343 GYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLYM 402
Query: 361 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 420
EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT
Sbjct: 403 EYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHLT 462
Query: 421 AEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNEL 480
AEIVQMTIPDIIKAIEW+KCSYL+VRMKKNP+KYAI+NGI NHN +KHMEDICIEKVNEL
Sbjct: 463 AEIVQMTIPDIIKAIEWMKCSYLFVRMKKNPQKYAIKNGIPNHNMDKHMEDICIEKVNEL 522
Query: 481 SRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEEI 540
SRHQMIWMDEDGFLLKPL DPGRLMTKYYLKFDTMKHIM APENCSL+EAL IICHAEEI
Sbjct: 523 SRHQMIWMDEDGFLLKPL-DPGRLMTKYYLKFDTMKHIMHAPENCSLEEALRIICHAEEI 582
Query: 541 AWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPSI 600
+WIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDP I
Sbjct: 583 SWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPLI 642
Query: 601 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLKQ 660
HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGT+NSMLLAKSLYQKLWDDSPFLLKQ
Sbjct: 643 HDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTYNSMLLAKSLYQKLWDDSPFLLKQ 702
Query: 661 LPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLKL 720
LPGIGMVTAKALHSMGIKSFEALA+ADPRKIEIVTGRKYPFGNHIKESLSSLPP VDLKL
Sbjct: 703 LPGIGMVTAKALHSMGIKSFEALAEADPRKIEIVTGRKYPFGNHIKESLSSLPPKVDLKL 762
Query: 721 EEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPYS 780
EE ECP+QGKAKLIVTLTR+PQSYRP+KRHYA+MIVGSEEDNQILFHEKI SPYS
Sbjct: 763 EEAECPKQGKAKLIVTLTRMPQSYRPNKRHYAEMIVGSEEDNQILFHEKIRVDEFSSPYS 822
Query: 781 AIVLVPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPEEL 840
+VL+ HPQ+GKLTIKADLIFDEYIGIDLHRKLQLME+N N RNKWGRMP SS HPPEE+
Sbjct: 823 TVVLLSHPQQGKLTIKADLIFDEYIGIDLHRKLQLMEQNLNVRNKWGRMPPSS-HPPEEV 882
Query: 841 YVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEELGEAEPATGNDEDECKIITE 900
YVIDDD EPLPQ AT ELP S D N LLDSMPSFNLLDE+L EA+PATGNDEDECKIITE
Sbjct: 883 YVIDDDGEPLPQAATNELPISGDLNPLLDSMPSFNLLDEDLEEADPATGNDEDECKIITE 942
Query: 901 RTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPSPHA 960
RTVFDHIREKAK+FP+L ASKN A+SPA YSLT+N Q +ELQVEALEEK R E SPHA
Sbjct: 943 RTVFDHIREKAKNFPMLAASKNNAHSPAAVTYSLTKNKQPLELQVEALEEKHRIELSPHA 1002
Query: 961 NVDSFSGFREEL-GNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFDHI 1020
+DSFSGFR+E+ N+Y+T Q+HITSG DD+KG E +Q E SKIIVTEETIFDHI
Sbjct: 1003 KLDSFSGFRDEVQNNEYVTQQSHITSGPRFIDDDKG--ESGVQREGSKIIVTEETIFDHI 1062
Query: 1021 KRKANSFPVVSQFFVN--TAG------TYGKLNQPSRDSSLSLSDAELASAQMLSFDISM 1080
KRK+NSFPV+ + N T G Y KLN+ + S M+ FDISM
Sbjct: 1063 KRKSNSFPVIHKNCENERTGGGGGGGDGYRKLNE----------GCSVESMGMVCFDISM 1122
Query: 1081 MKEKKR----PRPASPNISSTW--SHQSPPVDSKKKCCSLETATETREVDPFVGFKSVFS 1122
MKE KR P +S SS W QSP V ++K CSL+TATET EVDPFV FKSVFS
Sbjct: 1123 MKENKRARAGPESSSDMNSSKWKKQQQSPSVGNRKNWCSLQTATETSEVDPFVAFKSVFS 1164
BLAST of MS003127 vs. TAIR 10
Match:
AT3G27730.1 (ATP binding;ATP-dependent helicases;DNA helicases )
HSP 1 Score: 1346.3 bits (3483), Expect = 0.0e+00
Identity = 718/1146 (62.65%), Postives = 852/1146 (74.35%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIA-EGKFIHVKGTLKSIYVAPSKALVQEKLRDWN 60
M+ISAPTGSGKTVLFELCILRL SK I+ EG F+H KG LK++Y++PSKALVQEKLRDWN
Sbjct: 43 MIISAPTGSGKTVLFELCILRLFSKSISKEGSFLHAKGALKTVYISPSKALVQEKLRDWN 102
Query: 61 QKFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALV 120
QKF SWG+SCLELTGDNETYS K IQ+ADIILTTPEKFDAV+RYR+ GGL FFSDIALV
Sbjct: 103 QKFNSWGISCLELTGDNETYSTKNIQDADIILTTPEKFDAVSRYRVTSGGLGFFSDIALV 162
Query: 121 LIDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYF 180
LIDEVHLLNDPRGAALEAIVSR+K+++ + E++SS L+ VR LAVSATIPNI DL + +
Sbjct: 163 LIDEVHLLNDPRGAALEAIVSRLKILSSNHELRSSTLASVRLLAVSATIPNIEDLAE-WL 222
Query: 181 RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKS 240
+V +G + RFGEEMRPVKLT+KVFGYA AKNDF+FEK R N D+LMQYS+GKS
Sbjct: 223 KVPTAGIK---RFGEEMRPVKLTTKVFGYAAAKNDFLFEK--RLQNYIYDILMQYSKGKS 282
Query: 241 ALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCG 300
ALVFCSTRKGAQEAAQ+L+QTAMT+GYSNPFIKS+EQLERLREAS CSDKQMQS IL G
Sbjct: 283 ALVFCSTRKGAQEAAQKLAQTAMTYGYSNPFIKSREQLERLREASPMCSDKQMQSYILQG 342
Query: 301 VGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLY 360
VGYHNGGLC KDR+L+E LFL GDIQVICTTNTLAHGINLPAHTV+IKSTQHFNKEKG Y
Sbjct: 343 VGYHNGGLCQKDRSLVEGLFLNGDIQVICTTNTLAHGINLPAHTVVIKSTQHFNKEKGHY 402
Query: 361 MEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHL 420
MEYDRST+LQM GRAGRPPFDDTG+VIIMTRR+TVHLYENLLNGCE+VESQLL C+ EHL
Sbjct: 403 MEYDRSTLLQMSGRAGRPPFDDTGMVIIMTRRETVHLYENLLNGCEVVESQLLPCLIEHL 462
Query: 421 TAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNE 480
TAEIVQ+TI DI +AIEW+KCSYLYVRMKKNPE YAI+ GI EKH++++C++K+NE
Sbjct: 463 TAEIVQLTISDITRAIEWMKCSYLYVRMKKNPENYAIKKGIPKDRVEKHLQELCLQKINE 522
Query: 481 LSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPENCSLDEALHIICHAEE 540
LS++QMIW D DGF+LKP +PGRLMTKYYLKF+TMK+I+ P + SLDEALHI+CHAEE
Sbjct: 523 LSQYQMIWTDTDGFVLKP-EEPGRLMTKYYLKFETMKYIINTPTSYSLDEALHIVCHAEE 582
Query: 541 IAWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFILANDCLTGDPS 600
I+WIQLRRNEKK LNDVN DK+GRLRFHI KGK+KKRIQTREEK+F+LAND LTGDPS
Sbjct: 583 ISWIQLRRNEKKTLNDVNADKEGRLRFHINDNKGKRKKRIQTREEKLFVLANDWLTGDPS 642
Query: 601 IHDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLWDDSPFLLK 660
+HDLS++QD NSICSNG RIA+CMKEYF+Y+KNYKGT +S LLAKSLYQKLWDDSP+LLK
Sbjct: 643 VHDLSMTQDANSICSNGSRIARCMKEYFIYKKNYKGTLSSTLLAKSLYQKLWDDSPYLLK 702
Query: 661 QLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSSLPPGVDLK 720
QLPGIGMVTAKALHSMG++SFEALA+ADPR+IEIVTGRKYPFGN IKESLSSLPP V++K
Sbjct: 703 QLPGIGMVTAKALHSMGVRSFEALAEADPRRIEIVTGRKYPFGNTIKESLSSLPPKVEIK 762
Query: 721 LEEVECPRQGKAKLIVTLTRLPQSYRPSKRHYADMIVGSEEDNQILFHEKI------SPY 780
+EEV+C +QG +KL VTL+R+ Q + +KRHYAD+IVGSEE+N I FHEKI SPY
Sbjct: 763 VEEVDCQKQGISKLAVTLSRVSQPLQSTKRHYADLIVGSEEENLIHFHEKIRMEDFSSPY 822
Query: 781 SAIVLVPHP-QRGKLTIKADLIFDEYIGIDLHRKLQLMERNSNARNKWGRMPSSSFHPPE 840
S VL+ P Q+ K+T+KADLIF+EYIGIDLH L L + N+N N ++PP
Sbjct: 823 SVTVLLERPHQQTKVTVKADLIFEEYIGIDLHETLLLKKANNNKVNYKSENRMPQYYPPM 882
Query: 841 ELYVIDDDSEPLPQDATKELPRSADSNALLDSMPSFNLLDEEL-GEAEPATGNDEDECKI 900
I DD P+ + + D MPSF L+D++ E EP +ED+C I
Sbjct: 883 ASACIADDDNPVTSGPSNRKDKK-------DDMPSFKLIDDDSEEEKEPYVTMEEDDCVI 942
Query: 901 ITERTVFDHIREKAKSFPVLGASKNRAYSPAPEAYSLTRNMQQIELQVEALEEKQRNEPS 960
I E TVFDHIREKAK FP L N SPA L R ++L E E
Sbjct: 943 INEHTVFDHIREKAKCFPSLN-PLNPTSSPASGKSILKR---------KSLVENNSPELD 1002
Query: 961 PHANVDSFSGFREELGNQYLTLQNHITSGSHEKDDNKGELELDLQTEESKIIVTEETIFD 1020
P DS + + Q ITS + K E E ++ETIF+
Sbjct: 1003 PLFQYDSVFDLPTNTKDIKQSAQ-QITSPGYASFAEKTETERPF---------SDETIFN 1062
Query: 1021 HIKRKANSFPVVS----------------QFFVNTAGTYGKLNQPSRDSSLSLSDAELAS 1080
+I++++ + P ++ ++ TYG L P+ SD A
Sbjct: 1063 YIRKRSKNSPALATSKIENPITISSQEGRNAEISPYRTYGLLVSPATKIPRITSD---AP 1122
Query: 1081 AQMLSFDISMMKEKKRPRPASPNISSTWSHQSPPVDSKKKCCSLETATETREVDPFVGFK 1122
+++LSFDISM+K + ST + +S DS F+GFK
Sbjct: 1123 SEILSFDISMVKRSDTSLEQTKGFCSTLAGKSNVSDS------------------FLGFK 1133
BLAST of MS003127 vs. TAIR 10
Match:
AT2G42270.1 (U5 small nuclear ribonucleoprotein helicase )
HSP 1 Score: 270.8 bits (691), Expect = 5.0e-72
Identity = 213/682 (31.23%), Postives = 341/682 (50.00%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLS-KFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWN 60
+++ APTG+GKT + L IL L G F H G K +YVAP KALV E + +
Sbjct: 524 ILLCAPTGAGKTNVAVLTILHQLGLNMNPGGTFNH--GNYKIVYVAPMKALVAEVVDSLS 583
Query: 61 QKFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALV 120
Q+ +GV+ EL+GD ++ + + I+E II+TTPEK+D +TR K G ++ + L+
Sbjct: 584 QRLKDFGVTVKELSGD-QSLTGQEIKETQIIVTTPEKWDIITR---KSGDRTYTQLVRLL 643
Query: 121 LIDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYF 180
+IDE+HLL+D RG LE+IV AR+ S +R + +SAT+PN D+ F
Sbjct: 644 IIDEIHLLDDNRGPVLESIV------ARTLRQIESTKEHIRLVGLSATLPNCDDVASF-L 703
Query: 181 RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAK--------NDFMFEKKCRCSNEFADVL 240
RV + FI F RPV L + G K ND ++K +
Sbjct: 704 RVDLKN-GLFI-FDRSYRPVPLGQQYIGINVKKPLRRFQLMNDICYQK-----------V 763
Query: 241 MQYSRGKSALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQ 300
+ + L+F +RK + A+ + TAM + F+K Q + L C
Sbjct: 764 VAVAGKHQVLIFVHSRKETAKTARAIRDTAMANDTLSRFLKEDSQSREI----LKCLAGL 823
Query: 301 MQSNIL-----CGVGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVII 360
+++N L G H+ GL DR ++E+ F G++QV+ +T TLA G+NLPAHTVII
Sbjct: 824 LKNNDLKELLPYGFAIHHAGLTRTDREIVENQFRWGNLQVLISTATLAWGVNLPAHTVII 883
Query: 361 KSTQHFNKEKGLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEI 420
K TQ +N E+G +ME ++QM GRAGRP +D G II+T + Y L+N
Sbjct: 884 KGTQVYNPERGEWMELSPLDVMQMIGRAGRPQYDQQGEGIIITGYSKLQYYLRLMNEQLP 943
Query: 421 VESQLLSCVTEHLTAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHN-- 480
+ESQ +S + + L AEIV TI + +A W+ +YLYVRM +NP Y + +
Sbjct: 944 IESQFISKLADQLNAEIVLGTIQNAREACHWLGYTYLYVRMVRNPTLYGVSPDALAKDLL 1003
Query: 481 TEKHMEDICIEKVNELSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHIMQAPEN 540
E+ D+ L ++ +I D + + D GR+ + YY+ T+ + +
Sbjct: 1004 LEERRADLIHSAATILDKNNLIKYDRKSGHFQ-VTDLGRIASYYYISHGTIAAYNENLKP 1063
Query: 541 CSLD-EALHIICHAEEIAWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTRE 600
D E + +EE ++ +R++EK L + + R+ + K+ ++
Sbjct: 1064 TMNDIELCRLFSLSEEFKYVTVRQDEKMELAKLLD----RVPIPV-------KETLEDPS 1123
Query: 601 EKIFILANDCLTGDPSIHDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLA 660
KI +L ++ + LSL+ DM I + R+ + + E + R + + ++ L+
Sbjct: 1124 AKINVLLQVYIS-KLKLEGLSLTSDMVYITQSAGRLLRAIFEIVLKRGWAQLSQKALNLS 1160
Query: 661 KSLYQKLWD-DSPFLLKQLPGI 665
K + +++W +P L Q PGI
Sbjct: 1184 KMVGKRMWSVQTP--LWQFPGI 1160
BLAST of MS003127 vs. TAIR 10
Match:
AT5G61140.1 (U5 small nuclear ribonucleoprotein helicase )
HSP 1 Score: 269.6 bits (688), Expect = 1.1e-71
Identity = 226/836 (27.03%), Postives = 383/836 (45.81%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
+++ APTGSGKT+ EL +LRL S + +K +Y+AP KA+V+E++ DW +
Sbjct: 1363 VLVGAPTGSGKTISAELAMLRLFS----------TQPDMKVVYIAPLKAIVRERMNDWKK 1422
Query: 61 KF-GSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALV 120
G +E+TGD T + + ADII++TPEK+D ++R S+ + LV
Sbjct: 1423 HLVAPLGKEMVEMTGD-YTPDLVALLSADIIISTPEKWDGISR---NWHTRSYVKKVGLV 1482
Query: 121 LIDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYF 180
++DE+HLL RG LE IVSR++ I+ E VRF+ +S + N GDL +
Sbjct: 1483 ILDEIHLLGADRGPILEVIVSRMRYISSQTE------RSVRFVGLSTALANAGDLADWLG 1542
Query: 181 RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKS 240
I F F +RPV + + GY P K + + + + +S K
Sbjct: 1543 VGEIGLF----NFKPSVRPVPIEVHIQGY-PGK--YYCPRMNSMNKPAYAAICTHSPTKP 1602
Query: 241 ALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCG 300
L+F S+R+ + A L Q A + + F+ E E L+ +D+ ++ + G
Sbjct: 1603 VLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSVSE--EDLQMVLSQITDQNLRHTLQFG 1662
Query: 301 VGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLY 360
+G H+ GL DR+ +E LF IQV+ +T+TLA G+NLPAH VIIK T++F+ + Y
Sbjct: 1663 IGLHHAGLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRY 1722
Query: 361 MEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHL 420
+++ + ILQM GRAGRP FD G +I+ Y+ L VES L + +H
Sbjct: 1723 VDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEKLHDHF 1782
Query: 421 TAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNE 480
AEIV TI + A+ ++ +YL+ R+ NP Y + G + ++ + +
Sbjct: 1783 NAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGL-EGTQDETICSYLSRLVQTTFED 1842
Query: 481 LSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHI-MQAPENCSLDEALHIICHAE 540
L + ++ED L G + ++YYL + T+ + SL+ LHI+ A
Sbjct: 1843 LEDSGCLKVNEDSVEPTML---GTIASQYYLCYMTVSMFGSNIGPDTSLEAFLHILAGAS 1902
Query: 541 EIAWIQLRRNEKKLLNDVNNDKDGRLRF-----HILGEKGKKKKRIQTREEKIFILANDC 600
E + +R NE+ + N R+R+ H+ K Q ++ + +D
Sbjct: 1903 EYDELPVRHNEE----NYNKTLSDRVRYPVDNNHLDDPHVKANLLFQAHFSQLALPISDY 1962
Query: 601 LTGDPSIHDLSLS--QDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLW 660
T S+ D S+ Q M IC+N ++ + M L + + Q +W
Sbjct: 1963 NTDLKSVLDQSIRILQAMIDICANSGWLS--------------SSLTCMRLLQMVMQGMW 2022
Query: 661 DDSPFLLKQLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSS 720
D L +P + + +L + GI + L + ++ VT +P + + + L
Sbjct: 2023 SDQDSSLWMIPCMNDLLLGSLTARGIHTLHQLLNLPRETLQSVT-ENFP-ASRLSQDLQR 2082
Query: 721 LPPGVDLKLEEVECPRQGKAKLIVTLTRLPQ-SYRPSKRHYAD-----------MIVGSE 780
P + + + + GK K RL + S R S R A +++G
Sbjct: 2083 F-PRIQMNVRLQKKDSDGKKKPSTLEIRLEKTSKRNSSRALAPRFPKVKDEAWWLVLGDT 2142
Query: 781 EDNQILFHEKISPYSAIVL---VPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMER 813
+++ +++S ++ +P K L+ D Y+G + ++ + R
Sbjct: 2143 STSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIEQLAR 2144
BLAST of MS003127 vs. TAIR 10
Match:
AT5G61140.2 (U5 small nuclear ribonucleoprotein helicase )
HSP 1 Score: 269.6 bits (688), Expect = 1.1e-71
Identity = 226/836 (27.03%), Postives = 383/836 (45.81%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLSKFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWNQ 60
+++ APTGSGKT+ EL +LRL S + +K +Y+AP KA+V+E++ DW +
Sbjct: 1374 VLVGAPTGSGKTISAELAMLRLFS----------TQPDMKVVYIAPLKAIVRERMNDWKK 1433
Query: 61 KF-GSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALV 120
G +E+TGD T + + ADII++TPEK+D ++R S+ + LV
Sbjct: 1434 HLVAPLGKEMVEMTGD-YTPDLVALLSADIIISTPEKWDGISR---NWHTRSYVKKVGLV 1493
Query: 121 LIDEVHLLNDPRGAALEAIVSRIKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFYF 180
++DE+HLL RG LE IVSR++ I+ E VRF+ +S + N GDL +
Sbjct: 1494 ILDEIHLLGADRGPILEVIVSRMRYISSQTE------RSVRFVGLSTALANAGDLADWLG 1553
Query: 181 RVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGKS 240
I F F +RPV + + GY P K + + + + +S K
Sbjct: 1554 VGEIGLF----NFKPSVRPVPIEVHIQGY-PGK--YYCPRMNSMNKPAYAAICTHSPTKP 1613
Query: 241 ALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKEQLERLREASLSCSDKQMQSNILCG 300
L+F S+R+ + A L Q A + + F+ E E L+ +D+ ++ + G
Sbjct: 1614 VLIFVSSRRQTRLTALDLIQFAASDEHPRQFLSVSE--EDLQMVLSQITDQNLRHTLQFG 1673
Query: 301 VGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEKGLY 360
+G H+ GL DR+ +E LF IQV+ +T+TLA G+NLPAH VIIK T++F+ + Y
Sbjct: 1674 IGLHHAGLNDHDRSAVEELFTNNKIQVLVSTSTLAWGVNLPAHLVIIKGTEYFDGKTKRY 1733
Query: 361 MEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVTEHL 420
+++ + ILQM GRAGRP FD G +I+ Y+ L VES L + +H
Sbjct: 1734 VDFPLTEILQMMGRAGRPQFDQHGKAVILVHEPKKSFYKKFLYEPFPVESSLKEKLHDHF 1793
Query: 421 TAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNTEKHMEDICIEKVNE 480
AEIV TI + A+ ++ +YL+ R+ NP Y + G + ++ + +
Sbjct: 1794 NAEIVSGTIGNKEDAVHYLTWTYLFRRLMANPAYYGL-EGTQDETICSYLSRLVQTTFED 1853
Query: 481 LSRHQMIWMDEDGFLLKPLADPGRLMTKYYLKFDTMKHI-MQAPENCSLDEALHIICHAE 540
L + ++ED L G + ++YYL + T+ + SL+ LHI+ A
Sbjct: 1854 LEDSGCLKVNEDSVEPTML---GTIASQYYLCYMTVSMFGSNIGPDTSLEAFLHILAGAS 1913
Query: 541 EIAWIQLRRNEKKLLNDVNNDKDGRLRF-----HILGEKGKKKKRIQTREEKIFILANDC 600
E + +R NE+ + N R+R+ H+ K Q ++ + +D
Sbjct: 1914 EYDELPVRHNEE----NYNKTLSDRVRYPVDNNHLDDPHVKANLLFQAHFSQLALPISDY 1973
Query: 601 LTGDPSIHDLSLS--QDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQKLW 660
T S+ D S+ Q M IC+N ++ + M L + + Q +W
Sbjct: 1974 NTDLKSVLDQSIRILQAMIDICANSGWLS--------------SSLTCMRLLQMVMQGMW 2033
Query: 661 DDSPFLLKQLPGIGMVTAKALHSMGIKSFEALADADPRKIEIVTGRKYPFGNHIKESLSS 720
D L +P + + +L + GI + L + ++ VT +P + + + L
Sbjct: 2034 SDQDSSLWMIPCMNDLLLGSLTARGIHTLHQLLNLPRETLQSVT-ENFP-ASRLSQDLQR 2093
Query: 721 LPPGVDLKLEEVECPRQGKAKLIVTLTRLPQ-SYRPSKRHYAD-----------MIVGSE 780
P + + + + GK K RL + S R S R A +++G
Sbjct: 2094 F-PRIQMNVRLQKKDSDGKKKPSTLEIRLEKTSKRNSSRALAPRFPKVKDEAWWLVLGDT 2153
Query: 781 EDNQILFHEKISPYSAIVL---VPHPQRGKLTIKADLIFDEYIGIDLHRKLQLMER 813
+++ +++S ++ +P K L+ D Y+G + ++ + R
Sbjct: 2154 STSELFAVKRVSFTGRLITRMELPPNITSFQDTKLILVSDCYLGFEQEHSIEQLAR 2155
BLAST of MS003127 vs. TAIR 10
Match:
AT1G20960.1 (U5 small nuclear ribonucleoprotein helicase, putative )
HSP 1 Score: 268.1 bits (684), Expect = 3.2e-71
Identity = 200/662 (30.21%), Postives = 339/662 (51.21%), Query Frame = 0
Query: 1 MVISAPTGSGKTVLFELCILRLLS-KFIAEGKFIHVKGTLKSIYVAPSKALVQEKLRDWN 60
+++ APTG+GKT + L IL+ L +G + H G K +YVAP KALV E + + +
Sbjct: 523 ILLCAPTGAGKTNVAMLTILQQLEMNRNTDGTYNH--GDYKIVYVAPMKALVAEVVGNLS 582
Query: 61 QKFGSWGVSCLELTGDNETYSMKYIQEADIILTTPEKFDAVTRYRIKDGGLSFFSDIALV 120
+ +GV EL+GD ++ + + I+E II+TTPEK+D +TR K G ++ + L+
Sbjct: 583 NRLKDYGVIVRELSGD-QSLTGREIEETQIIVTTPEKWDIITR---KSGDRTYTQLVRLL 642
Query: 121 LIDEVHLLNDPRGAALEAIVSR-IKMIARSPEMKSSPLSQVRFLAVSATIPNIGDLGKFY 180
+IDE+HLL+D RG LE+IV+R ++ I + E +R + +SAT+PN D+ F
Sbjct: 643 IIDEIHLLHDNRGPVLESIVARTLRQIETTKE-------NIRLVGLSATLPNYEDVALF- 702
Query: 181 FRVSISGFQCFIRFGEEMRPVKLTSKVFGYAPAKNDFMFEKKCRCSNEFADVLMQYSRGK 240
RV + + +F RPV L + G + K F+ N+ + GK
Sbjct: 703 LRVDLK--KGLFKFDRSYRPVPLHQQYIGISVKKPLQRFQ----LMNDLCYQKVLAGAGK 762
Query: 241 -SALVFCSTRKGAQEAAQRLSQTAMTFGYSNPFIKSKE-QLERLREASLSCSDKQMQSNI 300
L+F +RK + A+ + TAM + F+K + L + ++ +
Sbjct: 763 HQVLIFVHSRKETSKTARAIRDTAMANDTLSRFLKEDSVTRDVLHSHEDIVKNSDLKDIL 822
Query: 301 LCGVGYHNGGLCLKDRNLIESLFLKGDIQVICTTNTLAHGINLPAHTVIIKSTQHFNKEK 360
G H+ GL DR ++E+LF +G +QV+ +T TLA G+NLPAHTVIIK TQ +N EK
Sbjct: 823 PYGFAIHHAGLSRGDREIVETLFSQGHVQVLVSTATLAWGVNLPAHTVIIKGTQVYNPEK 882
Query: 361 GLYMEYDRSTILQMCGRAGRPPFDDTGIVIIMTRRDTVHLYENLLNGCEIVESQLLSCVT 420
G +ME ++QM GRAGRP +D G II+T + Y +L+N +ESQ +S +
Sbjct: 883 GAWMELSPLDVMQMLGRAGRPQYDQHGEGIIITGYSELQYYLSLMNEQLPIESQFISKLA 942
Query: 421 EHLTAEIVQMTIPDIIKAIEWIKCSYLYVRMKKNPEKYAIRNGIFNHNT--EKHMEDICI 480
+ L AEIV T+ + +A W+ +YLY+RM +NP Y + + E+ D+
Sbjct: 943 DQLNAEIVLGTVQNAREACHWLGYTYLYIRMVRNPTLYGLAPDALAKDVVLEERRADLIH 1002
Query: 481 EKVNELSRHQMIWMD-EDGFLLKPLADPGRLMTKYYLKFDTM----KHIMQAPENCSLDE 540
L ++ ++ D + G+ + D GR+ + YY+ T+ +H+ + L
Sbjct: 1003 SAATILDKNNLVKYDRKSGYF--QVTDLGRIASYYYITHGTIATYNEHLKPTMGDIDL-- 1062
Query: 541 ALHIICHAEEIAWIQLRRNEKKLLNDVNNDKDGRLRFHILGEKGKKKKRIQTREEKIFIL 600
+ ++E ++ +R++EK L + + R+ I K+ ++ KI +L
Sbjct: 1063 -YRLFSLSDEFKYVTVRQDEKMELAKLLD----RVPIPI-------KETLEEPSAKINVL 1122
Query: 601 ANDCLTGDPSIHDLSLSQDMNSICSNGCRIAKCMKEYFVYRKNYKGTFNSMLLAKSLYQK 652
++ + LSL+ DM I + R+ + + E + R + ++ L+K + ++
Sbjct: 1123 LQAYIS-QLKLEGLSLTSDMVYITQSAGRLVRALYEIVLKRGWAQLAEKALNLSKMVGKR 1147
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022134426.1 | 0.0e+00 | 97.07 | DExH-box ATP-dependent RNA helicase DExH17 [Momordica charantia] | [more] |
XP_023527908.1 | 0.0e+00 | 88.11 | DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita pepo subsp. pepo] | [more] |
XP_022989936.1 | 0.0e+00 | 88.02 | DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita maxima] | [more] |
XP_022962158.1 | 0.0e+00 | 88.02 | DExH-box ATP-dependent RNA helicase DExH17 [Cucurbita moschata] | [more] |
KAG7033104.1 | 0.0e+00 | 87.50 | DExH-box ATP-dependent RNA helicase DExH17, partial [Cucurbita argyrosperma subs... | [more] |
Match Name | E-value | Identity | Description | |
Q5D892 | 0.0e+00 | 62.65 | DExH-box ATP-dependent RNA helicase DExH17 OS=Arabidopsis thaliana OX=3702 GN=ME... | [more] |
B6DMK2 | 0.0e+00 | 63.59 | ATP-dependent DNA helicase MER3 homolog OS=Oryza sativa subsp. japonica OX=39947... | [more] |
A2RUV5 | 4.0e-143 | 36.60 | Probable ATP-dependent DNA helicase HFM1 OS=Xenopus tropicalis OX=8364 GN=hfm1 P... | [more] |
D3Z4R1 | 1.7e-138 | 37.89 | Probable ATP-dependent DNA helicase HFM1 OS=Mus musculus OX=10090 GN=Hfm1 PE=3 S... | [more] |
A2PYH4 | 2.1e-136 | 37.56 | Probable ATP-dependent DNA helicase HFM1 OS=Homo sapiens OX=9606 GN=HFM1 PE=2 SV... | [more] |
Match Name | E-value | Identity | Description | |
A0A6J1BXS3 | 0.0e+00 | 97.07 | DExH-box ATP-dependent RNA helicase DExH17 OS=Momordica charantia OX=3673 GN=LOC... | [more] |
A0A6J1JLJ9 | 0.0e+00 | 88.02 | DExH-box ATP-dependent RNA helicase DExH17 OS=Cucurbita maxima OX=3661 GN=LOC111... | [more] |
A0A6J1HE00 | 0.0e+00 | 88.02 | DExH-box ATP-dependent RNA helicase DExH17 OS=Cucurbita moschata OX=3662 GN=LOC1... | [more] |
A0A0A0KSF5 | 0.0e+00 | 84.55 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523170 PE=4 SV=1 | [more] |
A0A1S3C985 | 0.0e+00 | 84.06 | DExH-box ATP-dependent RNA helicase DExH17 isoform X1 OS=Cucumis melo OX=3656 GN... | [more] |