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MS003125 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.TACAAAATCTGCGCATCTCAGAAATCTCCTGTTCCGATCGGACGTTCCTCTAGATTCAGGAATTTCGCCTCGCGGTTCCGCATGAGTGTTGATAATGGAGGCGCTAATCGGAGCGGATCTCGGATTGGTGCTGGAGATGCCGTCATCATCGTCGACCATGGCTCTCGCCGCCAGGAATCTAACCTCATGCTGAGTAAGCTAGGGTTTTGGAATTTCGAATTTGCTTGAAAAATTTTTGAAGTTCTACGCGTCTAATCCACTTGTGGCTCCCAATTTCTTGAAAATTTCAGATGAGTTTGTTGCTATGTTTAGGGATAAAACTGGTTACCCTATAGTGGAGCCTGCCCACATGGTATGTTCTTTTTAACTGTTTTTTCCCTTGTTCATCCATATATTTTAGTTTTGAATTCTAAAACATTTGAATTATCCTACATTTTGTATTACGTTCATCTCTGTTCCCTATTTTTAACATCCGTTAGCAGTAATGGAGAATATTGTTTCATCCTTAATATTTATGTTGAACCCTTCAACTCATGAAAATATCAATCTACTCTTAAGTACAGCATCACGAACATTCAAAATAACATGGACCCAACCCAATAAATAATGATATCATTAAATATGAATAGTATAGTAGTACATAACCTCCCCCCTCTCCCGTTTTTTAATAATTGAGAGTTGGACCTTCGCTCTCCTACGCTCAGAGGCGGAAATTATTCTATTCTATCGAGCTACTAGAAGTTTCTTTTTCATCGTCTTTTTCTTCCGGTCCCGTGCACGCATGTTTGAACACAACACATGATGTTAACTGATTTGATTAGAAAGAGTAACAGTCACAACCATGTCTAATGTACTTGAGCTTTCTTGGTCTATTCTAGCTATTATTGGTGTGGCCGGCCGGGGGCTCTAATGATTTTTCTTCTACTCTGTTCTGAAACTACACAGGAGCTGGCCGAACCGTCGATAAGAGACTCATTTGCATCGTGTGTTGAACAGGGGGCGAAACGTATCATTGTAAGCCCATTCTTCCTCTTTCCTGGCCGACATTGGCAACAGGTAGCTCACTGTCAGATGGTTAATTTGATGCAATGAACCAGTGTCTGTTTCATCTTCTGTGACTTCCAGTAACAGGATTGATAGAAATGACTGAAATTTTGCAGGACATTCCTTCCTTAACAGCTGAAGCAGCAAAGGATCACCCAGGAATATCATATATAGTAACAGCTCCTCTTGGTCTTCATGAAAAACTTGTGGTAAGAATTTCTCAAGTGGACTTTTTTCCAGTACAGGATAATGAAGAAAGCAAGGGCATACTTCATAGACTCATAAGTGATAAAAGAAAAAAATATATTTGTTCGAATTAAACTTGGGTATTCTGTTCGCAGGATGTTGTGAATGATAGAATAAATCACTGCTTAAGCCATGCTGCTGGAGTTGCAGATGAATGTGAAGTTTGTGCTGGAACAGGCAAATGCAGATTTTAT TACAAAATCTGCGCATCTCAGAAATCTCCTGTTCCGATCGGACGTTCCTCTAGATTCAGGAATTTCGCCTCGCGGTTCCGCATGAGTGTTGATAATGGAGGCGCTAATCGGAGCGGATCTCGGATTGGTGCTGGAGATGCCGTCATCATCGTCGACCATGGCTCTCGCCGCCAGGAATCTAACCTCATGCTGAATGAGTTTGTTGCTATGTTTAGGGATAAAACTGGTTACCCTATAGTGGAGCCTGCCCACATGGAGCTGGCCGAACCGTCGATAAGAGACTCATTTGCATCGTGTGTTGAACAGGGGGCGAAACGTATCATTGTAAGCCCATTCTTCCTCTTTCCTGGCCGACATTGGCAACAGGACATTCCTTCCTTAACAGCTGAAGCAGCAAAGGATCACCCAGGAATATCATATATAGTAACAGCTCCTCTTGGTCTTCATGAAAAACTTGTGGATGTTGTGAATGATAGAATAAATCACTGCTTAAGCCATGCTGCTGGAGTTGCAGATGAATGTGAAGTTTGTGCTGGAACAGGCAAATGCAGATTTTAT TACAAAATCTGCGCATCTCAGAAATCTCCTGTTCCGATCGGACGTTCCTCTAGATTCAGGAATTTCGCCTCGCGGTTCCGCATGAGTGTTGATAATGGAGGCGCTAATCGGAGCGGATCTCGGATTGGTGCTGGAGATGCCGTCATCATCGTCGACCATGGCTCTCGCCGCCAGGAATCTAACCTCATGCTGAATGAGTTTGTTGCTATGTTTAGGGATAAAACTGGTTACCCTATAGTGGAGCCTGCCCACATGGAGCTGGCCGAACCGTCGATAAGAGACTCATTTGCATCGTGTGTTGAACAGGGGGCGAAACGTATCATTGTAAGCCCATTCTTCCTCTTTCCTGGCCGACATTGGCAACAGGACATTCCTTCCTTAACAGCTGAAGCAGCAAAGGATCACCCAGGAATATCATATATAGTAACAGCTCCTCTTGGTCTTCATGAAAAACTTGTGGATGTTGTGAATGATAGAATAAATCACTGCTTAAGCCATGCTGCTGGAGTTGCAGATGAATGTGAAGTTTGTGCTGGAACAGGCAAATGCAGATTTTAT YKICASQKSPVPIGRSSRFRNFASRFRMSVDNGGANRSGSRIGAGDAVIIVDHGSRRQESNLMLNEFVAMFRDKTGYPIVEPAHMELAEPSIRDSFASCVEQGAKRIIVSPFFLFPGRHWQQDIPSLTAEAAKDHPGISYIVTAPLGLHEKLVDVVNDRINHCLSHAAGVADECEVCAGTGKCRFY Homology
BLAST of MS003125 vs. NCBI nr
Match: XP_022134499.1 (sirohydrochlorin ferrochelatase, chloroplastic [Momordica charantia]) HSP 1 Score: 377.1 bits (967), Expect = 8.8e-101 Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0
BLAST of MS003125 vs. NCBI nr
Match: XP_038890885.1 (sirohydrochlorin ferrochelatase, chloroplastic isoform X1 [Benincasa hispida]) HSP 1 Score: 355.5 bits (911), Expect = 2.7e-94 Identity = 171/185 (92.43%), Postives = 177/185 (95.68%), Query Frame = 0
BLAST of MS003125 vs. NCBI nr
Match: KAA0037556.1 (sirohydrochlorin ferrochelatase [Cucumis melo var. makuwa] >TYK03116.1 sirohydrochlorin ferrochelatase [Cucumis melo var. makuwa]) HSP 1 Score: 348.2 bits (892), Expect = 4.4e-92 Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of MS003125 vs. NCBI nr
Match: XP_008458790.1 (PREDICTED: sirohydrochlorin ferrochelatase, chloroplastic [Cucumis melo]) HSP 1 Score: 348.2 bits (892), Expect = 4.4e-92 Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of MS003125 vs. NCBI nr
Match: KAG7033101.1 (Sirohydrochlorin ferrochelatase, chloroplastic, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 344.0 bits (881), Expect = 8.2e-91 Identity = 166/185 (89.73%), Postives = 173/185 (93.51%), Query Frame = 0
BLAST of MS003125 vs. ExPASy Swiss-Prot
Match: Q84JH7 (Sirohydrochlorin ferrochelatase, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=SIRB PE=1 SV=1) HSP 1 Score: 241.9 bits (616), Expect = 5.8e-63 Identity = 109/145 (75.17%), Postives = 125/145 (86.21%), Query Frame = 0
BLAST of MS003125 vs. ExPASy Swiss-Prot
Match: P61817 (Sirohydrochlorin ferrochelatase OS=Bacillus megaterium OX=1404 GN=sirB PE=3 SV=1) HSP 1 Score: 86.3 bits (212), Expect = 4.1e-16 Identity = 41/116 (35.34%), Postives = 62/116 (53.45%), Query Frame = 0
BLAST of MS003125 vs. ExPASy Swiss-Prot
Match: P61819 (Sirohydrochlorin cobaltochelatase OS=Methanococcus maripaludis (strain S2 / LL) OX=267377 GN=cbiX PE=3 SV=1) HSP 1 Score: 78.2 bits (191), Expect = 1.1e-13 Identity = 41/141 (29.08%), Postives = 67/141 (47.52%), Query Frame = 0
BLAST of MS003125 vs. ExPASy Swiss-Prot
Match: Q58380 (Sirohydrochlorin cobaltochelatase OS=Methanocaldococcus jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) OX=243232 GN=cbiX PE=1 SV=1) HSP 1 Score: 76.3 bits (186), Expect = 4.2e-13 Identity = 43/138 (31.16%), Postives = 66/138 (47.83%), Query Frame = 0
BLAST of MS003125 vs. ExPASy Swiss-Prot
Match: A6UWT5 (Sirohydrochlorin cobaltochelatase OS=Methanococcus aeolicus (strain ATCC BAA-1280 / DSM 17508 / OCM 812 / Nankai-3) OX=419665 GN=cbiX PE=3 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 1.4e-11 Identity = 40/138 (28.99%), Postives = 66/138 (47.83%), Query Frame = 0
BLAST of MS003125 vs. ExPASy TrEMBL
Match: A0A6J1BYW9 (sirohydrochlorin ferrochelatase, chloroplastic OS=Momordica charantia OX=3673 GN=LOC111006726 PE=4 SV=1) HSP 1 Score: 377.1 bits (967), Expect = 4.3e-101 Identity = 182/186 (97.85%), Postives = 184/186 (98.92%), Query Frame = 0
BLAST of MS003125 vs. ExPASy TrEMBL
Match: A0A5D3BY55 (Sirohydrochlorin ferrochelatase OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold374G00520 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92 Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of MS003125 vs. ExPASy TrEMBL
Match: A0A1S3C8S9 (sirohydrochlorin ferrochelatase, chloroplastic OS=Cucumis melo OX=3656 GN=LOC103498093 PE=4 SV=1) HSP 1 Score: 348.2 bits (892), Expect = 2.1e-92 Identity = 167/185 (90.27%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of MS003125 vs. ExPASy TrEMBL
Match: A0A0A0KP17 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523150 PE=4 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 1.3e-89 Identity = 160/185 (86.49%), Postives = 174/185 (94.05%), Query Frame = 0
BLAST of MS003125 vs. ExPASy TrEMBL
Match: A0A6J1K384 (sirohydrochlorin ferrochelatase, chloroplastic-like OS=Cucurbita maxima OX=3661 GN=LOC111489668 PE=4 SV=1) HSP 1 Score: 338.2 bits (866), Expect = 2.2e-89 Identity = 165/187 (88.24%), Postives = 175/187 (93.58%), Query Frame = 0
BLAST of MS003125 vs. TAIR 10
Match: AT1G50170.1 (sirohydrochlorin ferrochelatase B ) HSP 1 Score: 241.9 bits (616), Expect = 4.1e-64 Identity = 109/145 (75.17%), Postives = 125/145 (86.21%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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