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MS003115 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCCAAGTTTCTTGCAGAAGGAAAGAAAAGGAGCGCAACAATTTCGACCCGTACAAAGTCATTGAAATCACTCCTCCGCCGAAGAATCTCGGCATTCGCTGCTTTCCGCCCGTAAGTGTTCCATTGTCTTTGAACTACAGATTGGCTTTCCGACACGAACATCCGTTGTACTACTGACGTTGTGAATATGAGCTTAAGATTATGCGTCTACTTTCATTTTTTCGAGTCGGCATTAGAAAAATTTAATACATAGAGGTTTTAGGATTAGGAGGACACTTTGTGATTTTGGTCAATGTATTTTACCTTTATGCTAATTTTGTTCGGCGAGTAGCCCGTTTTCATTAGTTTTTCATAAAGTGGAAACAATAGATTTATTGGAAGTTGATTAGATACGATTTCTTAGCCTTACCACATGAAAAAAACATCACCCGTAGATGTTTTCGGCTAATCCGTAGCCCGTGGACGTTAAATATGTGCACCAACCATACTATAATACACTGAGAGACATCAATCAATCACGAAGCTTTTGACTATGGAGTTATGAAGTTGTATGGATTGTCAAACGACTAATACAAGTGTCACTTTGTTTTTGAGTTTTGGTTTATAAAAGGTTTAATCTAATACCACTGTTCTGAAGAATTAAAGTAGAGTTGATTGGTAGACTTCAACCTCTGATTACCTTGTGACTTGGTCGTGGGATTGTTCTACTTGGTAGGAATAGGATCTCGTGGTCCTGAAATATTCCTATTTTTTCAGGTTGCATGTACCTTGCTTAAGCTACTGAGTTCATTCACCTATTCTTTCACCTTTTTGTTTTTTTAGGTACAAGCTATGCATAACTTGAGAGCAGTGATACCCCTCATCATATTAAATGCCTTATTTGTAGTCTTTCTCTCAAACCTAGGGCTTGGTCTTGTGCAATCAAGGTGGGAAGTTTGGTTGGAAAGAAATATCAAAACCTTCAAGAATAAATTTAGAAATTGGTAGAGTTGTAGGGCATCTTTCATTCTTTTTATCCCTTCTGGCTTCTTGGTGTACTCTTTCATCTCTCATGTATCTCCGTTTCTTTTTTAATTTAATAACAATTGGAGCGATAAACCTAAGGTTCACTCGTAACCGTACTTGAACAAGATCTTGTTCTATAAGTTGTACGTGTACCTCTGTGTTCTTGAGTTATAAAAAAGGCCTAAGGTTCACTCTAAAGCAACAAGTTGTTGAACTGTTTTAAGGTCAAGGACAACTAATGAGCAAGACGTGTGTAAATAAATAAATAAATAAAATTATAAACAAGCAGGGAAAATTTTGTTGTACGTGGTACTCGCCTCACTTGTCTTCGACAGTGTTGAAAGGTGCAACAACAGTGTGCTTGGCGAGCACCACAGCGAAGACACTCGCTAAAGCTCTATAAAATACGAGAAACAACGACACTGCCTTGGCTTTGCCATGAACCATAAGTCACTCTCTAACAAACTTTGTGTTCTTTATTTTTTCTATAGTTCAGTTATCAATATAGTTTTGTTTCTTATCTATAGGGGGAAAAGGCATGAATCATCTTTTGTCTTACTGTCATTTTGGTCTTCTTTCAGAACTTACAATGTGGGGAGAGTGTGACAATAGAAGGCCAAACATACACCATCTCAGCTGTAACTCATCGCTATCAGCTCAGGAAGGGGAAGTATGAGCCAACTGAAAAGAGACTTGATGTTTTGTCCACAGGGAGGTATATATTGAACTTGTATCTAGAAAATTTATTAGAAAAATCT CTCCAAGTTTCTTGCAGAAGGAAAGAAAAGGAGCGCAACAATTTCGACCCGTACAAAGTCATTGAAATCACTCCTCCGCCGAAGAATCTCGGCATTCGCTGCTTTCCGCCCAACTTACAATGTGGGGAGAGTGTGACAATAGAAGGCCAAACATACACCATCTCAGCTGTAACTCATCGCTATCAGCTCAGGAAGGGGAAGTATGAGCCAACTGAAAAGAGACTTGATGTTTTGTCCACAGGGAGGTATATATTGAACTTGTATCTAGAAAATTTATTAGAAAAATCT CTCCAAGTTTCTTGCAGAAGGAAAGAAAAGGAGCGCAACAATTTCGACCCGTACAAAGTCATTGAAATCACTCCTCCGCCGAAGAATCTCGGCATTCGCTGCTTTCCGCCCAACTTACAATGTGGGGAGAGTGTGACAATAGAAGGCCAAACATACACCATCTCAGCTGTAACTCATCGCTATCAGCTCAGGAAGGGGAAGTATGAGCCAACTGAAAAGAGACTTGATGTTTTGTCCACAGGGAGGTATATATTGAACTTGTATCTAGAAAATTTATTAGAAAAATCT LQVSCRRKEKERNNFDPYKVIEITPPPKNLGIRCFPPNLQCGESVTIEGQTYTISAVTHRYQLRKGKYEPTEKRLDVLSTGRYILNLYLENLLEKS Homology
BLAST of MS003115 vs. NCBI nr
Match: XP_022133646.1 (uncharacterized protein LOC111006184 [Momordica charantia]) HSP 1 Score: 201.8 bits (512), Expect = 2.6e-48 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of MS003115 vs. NCBI nr
Match: KAG6578668.1 (hypothetical protein SDJN03_23116, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016208.1 hypothetical protein SDJN02_21313, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 194.5 bits (493), Expect = 4.2e-46 Identity = 92/96 (95.83%), Postives = 95/96 (98.96%), Query Frame = 0
BLAST of MS003115 vs. NCBI nr
Match: XP_004142788.1 (uncharacterized protein LOC101221627 [Cucumis sativus] >KGN51358.1 hypothetical protein Csa_009241 [Cucumis sativus]) HSP 1 Score: 194.1 bits (492), Expect = 5.4e-46 Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of MS003115 vs. NCBI nr
Match: XP_008458808.1 (PREDICTED: uncharacterized protein LOC103498107 [Cucumis melo]) HSP 1 Score: 194.1 bits (492), Expect = 5.4e-46 Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of MS003115 vs. NCBI nr
Match: XP_022993339.1 (uncharacterized protein LOC111489380 [Cucurbita maxima] >XP_023551188.1 uncharacterized protein LOC111809077 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 192.6 bits (488), Expect = 1.6e-45 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of MS003115 vs. ExPASy TrEMBL
Match: A0A6J1BVQ0 (uncharacterized protein LOC111006184 OS=Momordica charantia OX=3673 GN=LOC111006184 PE=4 SV=1) HSP 1 Score: 201.8 bits (512), Expect = 1.3e-48 Identity = 96/96 (100.00%), Postives = 96/96 (100.00%), Query Frame = 0
BLAST of MS003115 vs. ExPASy TrEMBL
Match: A0A0A0KP15 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G523040 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.6e-46 Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of MS003115 vs. ExPASy TrEMBL
Match: A0A1S3C8Q2 (uncharacterized protein LOC103498107 OS=Cucumis melo OX=3656 GN=LOC103498107 PE=4 SV=1) HSP 1 Score: 194.1 bits (492), Expect = 2.6e-46 Identity = 92/95 (96.84%), Postives = 94/95 (98.95%), Query Frame = 0
BLAST of MS003115 vs. ExPASy TrEMBL
Match: A0A6J1JZX4 (uncharacterized protein LOC111489380 OS=Cucurbita maxima OX=3661 GN=LOC111489380 PE=4 SV=1) HSP 1 Score: 192.6 bits (488), Expect = 7.7e-46 Identity = 91/96 (94.79%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of MS003115 vs. ExPASy TrEMBL
Match: A0A6J1FGM6 (uncharacterized protein LOC111445315 OS=Cucurbita moschata OX=3662 GN=LOC111445315 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 1.3e-45 Identity = 90/96 (93.75%), Postives = 94/96 (97.92%), Query Frame = 0
BLAST of MS003115 vs. TAIR 10
Match: AT5G40500.1 (unknown protein; Has 30201 Blast hits to 17322 proteins in 780 species: Archae - 12; Bacteria - 1396; Metazoa - 17338; Fungi - 3422; Plants - 5037; Viruses - 0; Other Eukaryotes - 2996 (source: NCBI BLink). ) HSP 1 Score: 157.5 bits (397), Expect = 5.3e-39 Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 0
BLAST of MS003115 vs. TAIR 10
Match: AT5G40500.2 (unknown protein; FUNCTIONS IN: molecular_function unknown; INVOLVED IN: biological_process unknown; LOCATED IN: cellular_component unknown; EXPRESSED IN: 23 plant structures; EXPRESSED DURING: 13 growth stages; Has 49 Blast hits to 49 proteins in 22 species: Archae - 0; Bacteria - 7; Metazoa - 0; Fungi - 0; Plants - 42; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 157.5 bits (397), Expect = 5.3e-39 Identity = 74/97 (76.29%), Postives = 86/97 (88.66%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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