Sequences
The following sequences are available for this feature:
Gene sequence (with intron)
Legend: CDSpolypeptide
Hold the cursor over a type above to highlight its positions in the sequence below.
ATGGCGGAGTCCGAAACCGCGTCCGCAGGCAAATTCCGGTACCGGAGGCTGAGATACAGCGACGAATTTGAGGAGTCGTTCGGAAGATCCAGGCGACGATCAGGGATCAGGTTAGGAATTGTCGGAAGGGCTTCGATTAGGAGGAGGCTGAAGAAGCTCAAAATCCCTAGCCTCAGGAAGCTGCTGAGGAAGAAATCGCGGCTTGTGAAAGCCATGAGAGGCTCCATTTCGAAGGTCGTCAAGAGATTCAAAGACGGAGAAGCGTATTTGGGAGATCTTTTCGCCGGAAATTATCTGTTCCTTCAAGTTAATCCCAGCTCCATCAAATACCTCAATAAGCAATGCGCCGCCTTTCAAAGCTTCGCTCCCAAATATTCTCTCCCAACCTATAAT
mRNA sequence
ATGGCGGAGTCCGAAACCGCGTCCGCAGGCAAATTCCGGTACCGGAGGCTGAGATACAGCGACGAATTTGAGGAGTCGTTCGGAAGATCCAGGCGACGATCAGGGATCAGGTTAGGAATTGTCGGAAGGGCTTCGATTAGGAGGAGGCTGAAGAAGCTCAAAATCCCTAGCCTCAGGAAGCTGCTGAGGAAGAAATCGCGGCTTGTGAAAGCCATGAGAGGCTCCATTTCGAAGGTCGTCAAGAGATTCAAAGACGGAGAAGCGTATTTGGGAGATCTTTTCGCCGGAAATTATCTGTTCCTTCAAGTTAATCCCAGCTCCATCAAATACCTCAATAAGCAATGCGCCGCCTTTCAAAGCTTCGCTCCCAAATATTCTCTCCCAACCTATAAT
Coding sequence (CDS)
ATGGCGGAGTCCGAAACCGCGTCCGCAGGCAAATTCCGGTACCGGAGGCTGAGATACAGCGACGAATTTGAGGAGTCGTTCGGAAGATCCAGGCGACGATCAGGGATCAGGTTAGGAATTGTCGGAAGGGCTTCGATTAGGAGGAGGCTGAAGAAGCTCAAAATCCCTAGCCTCAGGAAGCTGCTGAGGAAGAAATCGCGGCTTGTGAAAGCCATGAGAGGCTCCATTTCGAAGGTCGTCAAGAGATTCAAAGACGGAGAAGCGTATTTGGGAGATCTTTTCGCCGGAAATTATCTGTTCCTTCAAGTTAATCCCAGCTCCATCAAATACCTCAATAAGCAATGCGCCGCCTTTCAAAGCTTCGCTCCCAAATATTCTCTCCCAACCTATAAT
Protein sequence
MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCAAFQSFAPKYSLPTYN
Homology
BLAST of MS003103 vs. NCBI nr
Match:
XP_022133605.1 (uncharacterized protein LOC111006144 [Momordica charantia])
HSP 1 Score: 243.4 bits (620), Expect = 1.1e-60
Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0
Query: 1 MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRK 60
MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIR GIVGRASIRRRLKKLKIPSLRK
Sbjct: 1 MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRFGIVGRASIRRRLKKLKIPSLRK 60
Query: 61 LLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCAAFQS 120
LLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCAA QS
Sbjct: 61 LLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCAALQS 120
Query: 121 FAPKYSLPTYN 132
FAPKYSLPTYN
Sbjct: 121 FAPKYSLPTYN 131
BLAST of MS003103 vs. NCBI nr
Match:
XP_023551709.1 (uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo])
HSP 1 Score: 160.6 bits (405), Expect = 9.1e-36
Identity = 92/131 (70.23%), Postives = 103/131 (78.63%), Query Frame = 0
Query: 6 TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIP 65
TA+ GKFRYRRLRYS+EFEE+FGRSR R VG RASI RRLKKL++P
Sbjct: 7 TAAPGKFRYRRLRYSEEFEEAFGRSRGGEERRRRFVGRSKRWFRIRRASIGRRLKKLRVP 66
Query: 66 SLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCA 125
SLRKLLR+KSRLV AMRGSI+KVVKRF++GEAYLGDLFAGNYLFLQVNPSSIK +
Sbjct: 67 SLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHS 126
Query: 126 AFQSFAPKYSL 128
A Q+FAP YSL
Sbjct: 127 ALQNFAPTYSL 137
BLAST of MS003103 vs. NCBI nr
Match:
XP_022990096.1 (uncharacterized protein LOC111487096 [Cucurbita maxima])
HSP 1 Score: 160.2 bits (404), Expect = 1.2e-35
Identity = 92/131 (70.23%), Postives = 102/131 (77.86%), Query Frame = 0
Query: 6 TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIP 65
TA GKFRYRRLRYS+EFEE+FGRSRR R VG RASI RRLKKL++P
Sbjct: 7 TAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVP 66
Query: 66 SLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCA 125
SLRKLLR+KSRLV AM+GSISKVVKRF++GEAYLGDLFAGNYLFLQVNPSSIK +
Sbjct: 67 SLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHS 126
Query: 126 AFQSFAPKYSL 128
A +FAP YSL
Sbjct: 127 ALPNFAPTYSL 137
BLAST of MS003103 vs. NCBI nr
Match:
XP_022922294.1 (uncharacterized protein LOC111430312 [Cucurbita moschata] >KAG7033079.1 hypothetical protein SDJN02_07132, partial [Cucurbita argyrosperma subsp. argyrosperma])
HSP 1 Score: 159.1 bits (401), Expect = 2.6e-35
Identity = 93/132 (70.45%), Postives = 104/132 (78.79%), Query Frame = 0
Query: 6 TASAGKFRYRRLRYSDEFEESFGRSRR-RSGIRLGIVG---------RASIRRRLKKLKI 65
TA GKFRYRRLRYS+EFEE+FGRSRR + R VG RASI RRLKKL++
Sbjct: 23 TAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRV 82
Query: 66 PSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQC 125
PSLRKLLR+KSRLV AMRGSI+KVVKRF++GEAYLGDLFAGNYLFLQVNPSSIK
Sbjct: 83 PSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHH 142
Query: 126 AAFQSFAPKYSL 128
+A Q+FAP YSL
Sbjct: 143 SALQNFAPTYSL 154
BLAST of MS003103 vs. NCBI nr
Match:
XP_038889218.1 (uncharacterized protein LOC120079105 [Benincasa hispida])
HSP 1 Score: 152.1 bits (383), Expect = 3.2e-33
Identity = 90/137 (65.69%), Postives = 105/137 (76.64%), Query Frame = 0
Query: 1 MAESETASAGKFRYRRLRYSDEFEESFGRSR------RRSGIRLGIVGRASIRRRLKKLK 60
MA+ ETA A KFRYRRL YS+EFEE+FGR R +RS I +SI RRLKKL+
Sbjct: 1 MADLETAPAAKFRYRRLSYSEEFEEAFGRYRGGERILKRSKRWFRIRKASSIGRRLKKLR 60
Query: 61 IPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYL-NK 120
IPSLRKLLR+KS+LV AMRGSISK++KRF+DGEAYLGDLFAGNYLFLQVNPSS+K L N
Sbjct: 61 IPSLRKLLRRKSQLVNAMRGSISKILKRFRDGEAYLGDLFAGNYLFLQVNPSSMKCLKNH 120
Query: 121 QCAAFQSFAPKYSLPTY 131
Q+F YSLP++
Sbjct: 121 HRFPLQNFPQTYSLPSF 137
BLAST of MS003103 vs. ExPASy TrEMBL
Match:
A0A6J1BVQ8 (uncharacterized protein LOC111006144 OS=Momordica charantia OX=3673 GN=LOC111006144 PE=4 SV=1)
HSP 1 Score: 243.4 bits (620), Expect = 5.2e-61
Identity = 129/131 (98.47%), Postives = 129/131 (98.47%), Query Frame = 0
Query: 1 MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVGRASIRRRLKKLKIPSLRK 60
MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIR GIVGRASIRRRLKKLKIPSLRK
Sbjct: 1 MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSGIRFGIVGRASIRRRLKKLKIPSLRK 60
Query: 61 LLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCAAFQS 120
LLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCAA QS
Sbjct: 61 LLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCAALQS 120
Query: 121 FAPKYSLPTYN 132
FAPKYSLPTYN
Sbjct: 121 FAPKYSLPTYN 131
BLAST of MS003103 vs. ExPASy TrEMBL
Match:
A0A6J1JM01 (uncharacterized protein LOC111487096 OS=Cucurbita maxima OX=3661 GN=LOC111487096 PE=4 SV=1)
HSP 1 Score: 160.2 bits (404), Expect = 5.8e-36
Identity = 92/131 (70.23%), Postives = 102/131 (77.86%), Query Frame = 0
Query: 6 TASAGKFRYRRLRYSDEFEESFGRSRRRSGIRLGIVG---------RASIRRRLKKLKIP 65
TA GKFRYRRLRYS+EFEE+FGRSRR R VG RASI RRLKKL++P
Sbjct: 7 TAPPGKFRYRRLRYSEEFEEAFGRSRRGEERRRRFVGRSKRWFKIRRASIGRRLKKLRVP 66
Query: 66 SLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQCA 125
SLRKLLR+KSRLV AM+GSISKVVKRF++GEAYLGDLFAGNYLFLQVNPSSIK +
Sbjct: 67 SLRKLLRRKSRLVTAMKGSISKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHHS 126
Query: 126 AFQSFAPKYSL 128
A +FAP YSL
Sbjct: 127 ALPNFAPTYSL 137
BLAST of MS003103 vs. ExPASy TrEMBL
Match:
A0A6J1E2Z5 (uncharacterized protein LOC111430312 OS=Cucurbita moschata OX=3662 GN=LOC111430312 PE=4 SV=1)
HSP 1 Score: 159.1 bits (401), Expect = 1.3e-35
Identity = 93/132 (70.45%), Postives = 104/132 (78.79%), Query Frame = 0
Query: 6 TASAGKFRYRRLRYSDEFEESFGRSRR-RSGIRLGIVG---------RASIRRRLKKLKI 65
TA GKFRYRRLRYS+EFEE+FGRSRR + R VG RASI RRLKKL++
Sbjct: 23 TAPPGKFRYRRLRYSEEFEEAFGRSRRGEARRRRRFVGRSKRWFRIRRASIGRRLKKLRV 82
Query: 66 PSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSIKYLNKQC 125
PSLRKLLR+KSRLV AMRGSI+KVVKRF++GEAYLGDLFAGNYLFLQVNPSSIK
Sbjct: 83 PSLRKLLRRKSRLVTAMRGSIAKVVKRFREGEAYLGDLFAGNYLFLQVNPSSIKCHKNHH 142
Query: 126 AAFQSFAPKYSL 128
+A Q+FAP YSL
Sbjct: 143 SALQNFAPTYSL 154
BLAST of MS003103 vs. ExPASy TrEMBL
Match:
A0A0A0KSD1 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517900 PE=4 SV=1)
HSP 1 Score: 150.2 bits (378), Expect = 6.0e-33
Identity = 95/154 (61.69%), Postives = 110/154 (71.43%), Query Frame = 0
Query: 1 MAESETASAGKFRYRRLRYSDEFEESFGRSRRRSG-----------------IRLGIVGR 60
MA+ ETASAGKFRYRRLRYS+EFEE+FGRSR G +R G
Sbjct: 1 MADLETASAGKFRYRRLRYSEEFEEAFGRSREGGGEGIRKRWRRRRWWFRMRMRKG-SSS 60
Query: 61 ASIRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQV 120
SI RRLKKL+IPSLRKLLR+K RLV AMRGSI+KVVKRF+DGEAYLGDLFAGNYLFLQV
Sbjct: 61 LSIGRRLKKLRIPSLRKLLRRKWRLVNAMRGSIAKVVKRFRDGEAYLGDLFAGNYLFLQV 120
Query: 121 NPSSIKYL-----NKQCAAF--QSFAPKYSLPTY 131
NPSS+K L ++Q F ++F YSLP++
Sbjct: 121 NPSSMKCLKNHHHHQQQHGFDVRNFPQTYSLPSF 153
BLAST of MS003103 vs. ExPASy TrEMBL
Match:
A0A1S4E272 (uncharacterized protein LOC107991631 OS=Cucumis melo OX=3656 GN=LOC107991631 PE=4 SV=1)
HSP 1 Score: 148.3 bits (373), Expect = 2.3e-32
Identity = 92/149 (61.74%), Postives = 109/149 (73.15%), Query Frame = 0
Query: 1 MAESETASAGKFRYRRLRYSDEFEESFGRSR------------RRSGIRLGI---VGRAS 60
MA+ ETASAGKFRYRRLRYS+EFEE+FGRSR RR R+ + S
Sbjct: 1 MADLETASAGKFRYRRLRYSEEFEEAFGRSRGGGGGIRKRWRTRRWWFRMRMRKGSSSLS 60
Query: 61 IRRRLKKLKIPSLRKLLRKKSRLVKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNP 120
I RRLKKL+IPSLRKL+R+K RLV AMRGSI+KV+KRF+DGEAYLGDLFAGNYLFLQVNP
Sbjct: 61 IGRRLKKLRIPSLRKLMRRKWRLVNAMRGSIAKVLKRFRDGEAYLGDLFAGNYLFLQVNP 120
Query: 121 SSIKYL--NKQCAAF--QSFAPKYSLPTY 131
SS+K + + Q F ++F YSLP +
Sbjct: 121 SSMKCMKNHHQQHGFDVRNFTQTYSLPNF 149
BLAST of MS003103 vs. TAIR 10
Match:
AT5G14410.1 (unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 23; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). )
HSP 1 Score: 60.8 bits (146), Expect = 9.1e-10
Identity = 52/124 (41.94%), Postives = 73/124 (58.87%), Query Frame = 0
Query: 14 YRRLRYSDEFEESFGR-SRRRSGI---RLGIVGRASIRRRLK-KLKIPSLRKLLRKKSRL 73
Y+RL D+ FG +RRRS R V RRR++ ++KI LR +RKK+
Sbjct: 12 YKRLSLEDDV---FGETTRRRSSFYSYRFKRVVSLGGRRRIRVRVKIRRLRGFVRKKANR 71
Query: 74 VKAMRGSISKVVKRFKDGEAYLGDLFAGNYLFLQVNPSSI--KYLNKQCAAFQ--SFAPK 129
VK I K++KR K+ +++ GDLFAGNYLF+QVNPSS+ KY+ + Q +F +
Sbjct: 72 VKT---GILKILKRLKESQSHFGDLFAGNYLFMQVNPSSLNAKYVFDKSFQGQNGNFPSR 129
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022133605.1 | 1.1e-60 | 98.47 | uncharacterized protein LOC111006144 [Momordica charantia] | [more] |
XP_023551709.1 | 9.1e-36 | 70.23 | uncharacterized protein LOC111809563 [Cucurbita pepo subsp. pepo] | [more] |
XP_022990096.1 | 1.2e-35 | 70.23 | uncharacterized protein LOC111487096 [Cucurbita maxima] | [more] |
XP_022922294.1 | 2.6e-35 | 70.45 | uncharacterized protein LOC111430312 [Cucurbita moschata] >KAG7033079.1 hypothet... | [more] |
XP_038889218.1 | 3.2e-33 | 65.69 | uncharacterized protein LOC120079105 [Benincasa hispida] | [more] |
Match Name | E-value | Identity | Description | |
Match Name | E-value | Identity | Description | |
A0A6J1BVQ8 | 5.2e-61 | 98.47 | uncharacterized protein LOC111006144 OS=Momordica charantia OX=3673 GN=LOC111006... | [more] |
A0A6J1JM01 | 5.8e-36 | 70.23 | uncharacterized protein LOC111487096 OS=Cucurbita maxima OX=3661 GN=LOC111487096... | [more] |
A0A6J1E2Z5 | 1.3e-35 | 70.45 | uncharacterized protein LOC111430312 OS=Cucurbita moschata OX=3662 GN=LOC1114303... | [more] |
A0A0A0KSD1 | 6.0e-33 | 61.69 | Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517900 PE=4 SV=1 | [more] |
A0A1S4E272 | 2.3e-32 | 61.74 | uncharacterized protein LOC107991631 OS=Cucumis melo OX=3656 GN=LOC107991631 PE=... | [more] |
Match Name | E-value | Identity | Description | |
AT5G14410.1 | 9.1e-10 | 41.94 | unknown protein; Has 23 Blast hits to 23 proteins in 9 species: Archae - 0; Bact... | [more] |