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MS003098 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAGAATCCGCCCCGGAGCCTGGATCTAATCGCTCCTATTCCGCTATCAACGGTGGCCGGACGAAGGAGGAATGCGAGGATATGATTCGAAGAAGCCTCCGAAGTATGGACACCAAATAAATTGTTTCCTTTTTATTCGTCTCGTAAAAATTTGGATGGTTTAGGGTTTAGGGTTTTACCAATTCTGTTCCTTTGCGGAATAATTTTTCAACTTTCTTTCGTTTTCTTACACTTTCTCAGCACTTCTCTGCGATCCAAGTGTCTGCTCTGAGTCTGGGTTTTTGGCTTTTCCAATGGGTCATTGATTCTATTTCTGTTTCTATCAGCTCCAATGGTGAAATTCCTGTTGGAGCATTTGGAGAAATCTGGATGCGGGATTGGGGATAAGTTTATTAAGGCTGTTCATTGCGATAAGCAGATCAGTGGCGGTTATGTTCGTGGTGAAGGGGTACTACCCATTTGTTTCCTCTCTTTATTTCCGCCTATGATTTTTAAGAATATTGGTTCATAGATTTGGATTTTTATATTGTCACTGAGAACGAATAAACAAAGTCTTCGGTAGTGGAAATGGATTTTCTGCAGAGCGTCTAGTTAGAAGTTGTTCTGGGTTCAACGATCAAGATGTTTTTTGAGAGGAAAAAGAAATAGACTGAATGATTTACCTTTCGGCATCCCCTGTCATTTATTGGGAGCTGGAAAGGATGAAGTCATTTCTCTCTCTCTCTCTTTTTTACATAATTTTGAAACTTTAGTTTAGATGATATTGCAGCAGTCAGCAGATCAGAAAGCCAAATGCCTCTGAATTTTTCCTAAAATTTTACTATTTCCTTTGTAATTGATATATTTTTATACCAAACTGTGATGGGGGTGATGAAATATGCTTGGACTTAAGAGTTAGAAAAGTGGGGGGTTTGAGACTGTTTGAGGCTGATTCTTTGCTGTTTCTAATTTTTTTCTGGTTGCCTCTTAGATAATGGTGTGTAGTAATCACATGAACATTCAAGATGAGGTCAACCAAGTCGTAATACACGAGCTCATTCATGCTTTTGATGATTGTCGTGCGGCAAACTTGGATTGGGCTAATTGTGCTCATCATGCTTGCAGTGAGGTATGCATCTGCAGTTAGCCATTAATTCCCAGGTTGAGTTTCATTTTTTCCAAAGGCTTACATTCTTTTATTTTGGTCTCTTGTTTTATTTCTCTTCTTGAGCTTTCCTAACATATGTATTTGTAATTTAGATTCGTGCTGGGCATCTAAGTGGTGATTGCCACTATAAACGAGAACTACTGCGAGGATATGTGAAATTACGAGGCCATGAGCAAGTATGATTTTCTGTCACTCATTCTTTCAGATAGAATAATAATCTTATTCGTTCTCTTGTTGGCATATAAAAAATGAGCAAAAGTTTCCAGCCATCCACAGCCATCCACTCTATTTTTGAAACTTGAGTTCTCTGGCTGTTAATAAACTCATGCTTAAAAGGTGAATAATTTTCGTTTTCCCAAGTTATTTTGTTACATTAAAGAACTCTTTATCATGATAGAATCTTTAAATCCTTGTGTTTATGCTCATGATAACTTGGATCTGATCTTGGCCATGAACATAATTGTTTTAGCCGTTCTTCTCCCAACCTCAATTGGCAATAGAGTTTTTAAAACTCAAGTATTGGATTTTCTCTAGGCCTTTGGATAAACTAGCTTAAAAATGAGCAGCAGTGAGAATAAAAGTTCTTCATAAAAGAAACATAATATTAACAGGACATTTTAAGAATGGTTCATTCTTGAAGCTGTGTTTTGCATTCAATTTTGTTCTTCCTTACCGGCCAATGTTTGGAAGAGATCTTGATTTGTTCAACCATGAATTAGTGGTTGCAATTAGGGGCTATTATAAGTCCTCCCAGTGTAGATGTTGGAGAGGATATATATGATCAAGAGGGCGATGAACCCGTGACCGAACAATGTGTGGGTGTGTGATAATAACAAGATACAAATCAGTATTTAATATTCTTTGGCCAATAATATTATTACCTCTCTCTGTCACACACACCGCTTCATCTTCTTACCTGTGAGCATTTGATGCGATCCACTCTGTTGAGCTTTTCTGGTTGGCTTTCCATTGACACTCTTTTTTTCGATTTCTGAAGGAGTGCGTGAGAAGAAGGGTAATGAAATCAGTGATTGCTAATCCTTATTGCTCAGAAGCTGCTGCGAAGGATGCAATGGAAGCTGTCTGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCC ATGGCAGAAGAATCCGCCCCGGAGCCTGGATCTAATCGCTCCTATTCCGCTATCAACGGTGGCCGGACGAAGGAGGAATGCGAGGATATGATTCGAAGAAGCCTCCGAACTCCAATGGTGAAATTCCTGTTGGAGCATTTGGAGAAATCTGGATGCGGGATTGGGGATAAGTTTATTAAGGCTGTTCATTGCGATAAGCAGATCAGTGGCGGTTATGTTCGTGGTGAAGGGATAATGGTGTGTAGTAATCACATGAACATTCAAGATGAGGTCAACCAAGTCGTAATACACGAGCTCATTCATGCTTTTGATGATTGTCGTGCGGCAAACTTGGATTGGGCTAATTGTGCTCATCATGCTTGCAGTGAGATTCGTGCTGGGCATCTAAGTGGTGATTGCCACTATAAACGAGAACTACTGCGAGGATATGTGAAATTACGAGGCCATGAGCAAGAGTGCGTGAGAAGAAGGGTAATGAAATCAGTGATTGCTAATCCTTATTGCTCAGAAGCTGCTGCGAAGGATGCAATGGAAGCTGTCTGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCC ATGGCAGAAGAATCCGCCCCGGAGCCTGGATCTAATCGCTCCTATTCCGCTATCAACGGTGGCCGGACGAAGGAGGAATGCGAGGATATGATTCGAAGAAGCCTCCGAACTCCAATGGTGAAATTCCTGTTGGAGCATTTGGAGAAATCTGGATGCGGGATTGGGGATAAGTTTATTAAGGCTGTTCATTGCGATAAGCAGATCAGTGGCGGTTATGTTCGTGGTGAAGGGATAATGGTGTGTAGTAATCACATGAACATTCAAGATGAGGTCAACCAAGTCGTAATACACGAGCTCATTCATGCTTTTGATGATTGTCGTGCGGCAAACTTGGATTGGGCTAATTGTGCTCATCATGCTTGCAGTGAGATTCGTGCTGGGCATCTAAGTGGTGATTGCCACTATAAACGAGAACTACTGCGAGGATATGTGAAATTACGAGGCCATGAGCAAGAGTGCGTGAGAAGAAGGGTAATGAAATCAGTGATTGCTAATCCTTATTGCTCAGAAGCTGCTGCGAAGGATGCAATGGAAGCTGTCTGGGATGTTTGTTATAATGATACACAGCCATTTGATAGAGCTCCC MAEESAPEPGSNRSYSAINGGRTKEECEDMIRRSLRTPMVKFLLEHLEKSGCGIGDKFIKAVHCDKQISGGYVRGEGIMVCSNHMNIQDEVNQVVIHELIHAFDDCRAANLDWANCAHHACSEIRAGHLSGDCHYKRELLRGYVKLRGHEQECVRRRVMKSVIANPYCSEAAAKDAMEAVWDVCYNDTQPFDRAP Homology
BLAST of MS003098 vs. NCBI nr
Match: XP_022133506.1 (mitochondrial inner membrane protease ATP23 [Momordica charantia]) HSP 1 Score: 411.4 bits (1056), Expect = 4.4e-111 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of MS003098 vs. NCBI nr
Match: XP_038890541.1 (mitochondrial inner membrane protease ATP23 [Benincasa hispida]) HSP 1 Score: 403.3 bits (1035), Expect = 1.2e-108 Identity = 188/195 (96.41%), Postives = 193/195 (98.97%), Query Frame = 0
BLAST of MS003098 vs. NCBI nr
Match: XP_022922282.1 (mitochondrial inner membrane protease ATP23 [Cucurbita moschata] >XP_022990978.1 mitochondrial inner membrane protease ATP23 [Cucurbita maxima] >XP_023526059.1 mitochondrial inner membrane protease ATP23 [Cucurbita pepo subsp. pepo] >KAG6602399.1 hypothetical protein SDJN03_07632, partial [Cucurbita argyrosperma subsp. sororia] >KAG7033074.1 ATP23 [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 400.6 bits (1028), Expect = 7.8e-108 Identity = 187/195 (95.90%), Postives = 192/195 (98.46%), Query Frame = 0
BLAST of MS003098 vs. NCBI nr
Match: XP_011655379.1 (mitochondrial inner membrane protease ATP23 [Cucumis sativus] >KGN51337.1 hypothetical protein Csa_008937 [Cucumis sativus]) HSP 1 Score: 397.1 bits (1019), Expect = 8.6e-107 Identity = 183/195 (93.85%), Postives = 192/195 (98.46%), Query Frame = 0
BLAST of MS003098 vs. NCBI nr
Match: XP_008458847.1 (PREDICTED: mitochondrial inner membrane protease ATP23 [Cucumis melo] >KAA0037615.1 mitochondrial inner membrane protease ATP23 [Cucumis melo var. makuwa] >TYK09357.1 mitochondrial inner membrane protease ATP23 [Cucumis melo var. makuwa]) HSP 1 Score: 391.0 bits (1003), Expect = 6.2e-105 Identity = 180/195 (92.31%), Postives = 189/195 (96.92%), Query Frame = 0
BLAST of MS003098 vs. ExPASy Swiss-Prot
Match: P0CQ26 (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain JEC21 / ATCC MYA-565) OX=214684 GN=ATP23 PE=3 SV=1) HSP 1 Score: 146.7 bits (369), Expect = 2.7e-34 Identity = 70/170 (41.18%), Postives = 102/170 (60.00%), Query Frame = 0
BLAST of MS003098 vs. ExPASy Swiss-Prot
Match: P0CQ27 (Mitochondrial inner membrane protease ATP23 OS=Cryptococcus neoformans var. neoformans serotype D (strain B-3501A) OX=283643 GN=ATP23 PE=3 SV=1) HSP 1 Score: 146.4 bits (368), Expect = 3.5e-34 Identity = 70/170 (41.18%), Postives = 102/170 (60.00%), Query Frame = 0
BLAST of MS003098 vs. ExPASy Swiss-Prot
Match: Q7T0P7 (Mitochondrial inner membrane protease ATP23 homolog OS=Xenopus laevis OX=8355 GN=atp23 PE=2 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.5e-32 Identity = 75/174 (43.10%), Postives = 110/174 (63.22%), Query Frame = 0
BLAST of MS003098 vs. ExPASy Swiss-Prot
Match: Q6C253 (Mitochondrial inner membrane protease ATP23 OS=Yarrowia lipolytica (strain CLIB 122 / E 150) OX=284591 GN=ATP23 PE=3 SV=1) HSP 1 Score: 138.3 bits (347), Expect = 9.4e-32 Identity = 68/159 (42.77%), Postives = 97/159 (61.01%), Query Frame = 0
BLAST of MS003098 vs. ExPASy Swiss-Prot
Match: Q9Y6H3 (Mitochondrial inner membrane protease ATP23 homolog OS=Homo sapiens OX=9606 GN=ATP23 PE=1 SV=3) HSP 1 Score: 136.7 bits (343), Expect = 2.7e-31 Identity = 72/177 (40.68%), Postives = 110/177 (62.15%), Query Frame = 0
BLAST of MS003098 vs. ExPASy TrEMBL
Match: A0A6J1BVA8 (Mitochondrial inner membrane protease ATP23 OS=Momordica charantia OX=3673 GN=LOC111006067 PE=3 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 2.1e-111 Identity = 195/195 (100.00%), Postives = 195/195 (100.00%), Query Frame = 0
BLAST of MS003098 vs. ExPASy TrEMBL
Match: A0A6J1JUV4 (Mitochondrial inner membrane protease ATP23 OS=Cucurbita maxima OX=3661 GN=LOC111487709 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 3.8e-108 Identity = 187/195 (95.90%), Postives = 192/195 (98.46%), Query Frame = 0
BLAST of MS003098 vs. ExPASy TrEMBL
Match: A0A6J1E2T7 (Mitochondrial inner membrane protease ATP23 OS=Cucurbita moschata OX=3662 GN=LOC111430307 PE=3 SV=1) HSP 1 Score: 400.6 bits (1028), Expect = 3.8e-108 Identity = 187/195 (95.90%), Postives = 192/195 (98.46%), Query Frame = 0
BLAST of MS003098 vs. ExPASy TrEMBL
Match: A0A0A0KSC7 (Mitochondrial inner membrane protease ATP23 OS=Cucumis sativus OX=3659 GN=Csa_5G517840 PE=3 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 4.2e-107 Identity = 183/195 (93.85%), Postives = 192/195 (98.46%), Query Frame = 0
BLAST of MS003098 vs. ExPASy TrEMBL
Match: A0A5D3CBI5 (Mitochondrial inner membrane protease ATP23 OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold249G00540 PE=3 SV=1) HSP 1 Score: 391.0 bits (1003), Expect = 3.0e-105 Identity = 180/195 (92.31%), Postives = 189/195 (96.92%), Query Frame = 0
BLAST of MS003098 vs. TAIR 10
Match: AT3G03420.1 (Ku70-binding family protein ) HSP 1 Score: 304.3 bits (778), Expect = 7.1e-83 Identity = 137/195 (70.26%), Postives = 164/195 (84.10%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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