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MS003090 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAGGGAAGGTCGCCAACATGGCATGGTAAGAACCTGCCGGATCATCCCATCCCCATGGAACCCAAGACCCGAAACCCGATTGATTAATGAACTCGATGTCCCTCCCACTGCTGGCCTCTTCACAAAGGTTTCATCCAAGCCTACCAACCACTCCAAGTTCACCGGAAAATGCGGCAAGACCCGATGCTCCGGCTGCCGGTTCCACCCGGTTCAAAAGGCCAAAGATAAAACCAAGGGATCTCATAAGTTCAAGTCGCACCATCTCGTCATTGACTGCCCGCTGGCCAATTACGACCCTGCAAGCTTCATCGATGATGATGGTGACGATCAGCCACTAGAAGTAACAGATTTTGAATCGAGGGTCGAAGATATTCATCATCATGTGGATGATGAAGACGAAGATGAAACGAGTTACTGTAAAGTAGAGTTTGTTGTGGAAGAAGCCGTGGAAGGAGACGACACTTGGTGTTTAGTAGAAGAAGACAAAGTAATC ATGAAGAGGGAAGGTCGCCAACATGGCATGGTAAGAACCTGCCGGATCATCCCATCCCCATGGAACCCAAGACCCGAAACCCGATTGATTAATGAACTCGATGTCCCTCCCACTGCTGGCCTCTTCACAAAGGTTTCATCCAAGCCTACCAACCACTCCAAGTTCACCGGAAAATGCGGCAAGACCCGATGCTCCGGCTGCCGGTTCCACCCGGTTCAAAAGGCCAAAGATAAAACCAAGGGATCTCATAAGTTCAAGTCGCACCATCTCGTCATTGACTGCCCGCTGGCCAATTACGACCCTGCAAGCTTCATCGATGATGATGGTGACGATCAGCCACTAGAAGTAACAGATTTTGAATCGAGGGTCGAAGATATTCATCATCATGTGGATGATGAAGACGAAGATGAAACGAGTTACTGTAAAGTAGAGTTTGTTGTGGAAGAAGCCGTGGAAGGAGACGACACTTGGTGTTTAGTAGAAGAAGACAAAGTAATC ATGAAGAGGGAAGGTCGCCAACATGGCATGGTAAGAACCTGCCGGATCATCCCATCCCCATGGAACCCAAGACCCGAAACCCGATTGATTAATGAACTCGATGTCCCTCCCACTGCTGGCCTCTTCACAAAGGTTTCATCCAAGCCTACCAACCACTCCAAGTTCACCGGAAAATGCGGCAAGACCCGATGCTCCGGCTGCCGGTTCCACCCGGTTCAAAAGGCCAAAGATAAAACCAAGGGATCTCATAAGTTCAAGTCGCACCATCTCGTCATTGACTGCCCGCTGGCCAATTACGACCCTGCAAGCTTCATCGATGATGATGGTGACGATCAGCCACTAGAAGTAACAGATTTTGAATCGAGGGTCGAAGATATTCATCATCATGTGGATGATGAAGACGAAGATGAAACGAGTTACTGTAAAGTAGAGTTTGTTGTGGAAGAAGCCGTGGAAGGAGACGACACTTGGTGTTTAGTAGAAGAAGACAAAGTAATC MKREGRQHGMVRTCRIIPSPWNPRPETRLINELDVPPTAGLFTKVSSKPTNHSKFTGKCGKTRCSGCRFHPVQKAKDKTKGSHKFKSHHLVIDCPLANYDPASFIDDDGDDQPLEVTDFESRVEDIHHHVDDEDEDETSYCKVEFVVEEAVEGDDTWCLVEEDKVI Homology
BLAST of MS003090 vs. NCBI nr
Match: XP_022134475.1 (uncharacterized protein LOC111006711 [Momordica charantia]) HSP 1 Score: 347.1 bits (889), Expect = 8.7e-92 Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of MS003090 vs. NCBI nr
Match: XP_023518174.1 (uncharacterized protein LOC111781716 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 257.3 bits (656), Expect = 9.1e-65 Identity = 129/168 (76.79%), Postives = 141/168 (83.93%), Query Frame = 0
BLAST of MS003090 vs. NCBI nr
Match: KAA0037631.1 (putative Calcium-binding site [Cucumis melo var. makuwa] >TYK22778.1 putative Calcium-binding site [Cucumis melo var. makuwa]) HSP 1 Score: 253.8 bits (647), Expect = 1.0e-63 Identity = 134/190 (70.53%), Postives = 143/190 (75.26%), Query Frame = 0
BLAST of MS003090 vs. NCBI nr
Match: KAG7033068.1 (hypothetical protein SDJN02_07121, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63 Identity = 129/170 (75.88%), Postives = 140/170 (82.35%), Query Frame = 0
BLAST of MS003090 vs. NCBI nr
Match: XP_022955039.1 (uncharacterized protein LOC111457115 [Cucurbita moschata]) HSP 1 Score: 251.9 bits (642), Expect = 3.8e-63 Identity = 129/170 (75.88%), Postives = 140/170 (82.35%), Query Frame = 0
BLAST of MS003090 vs. ExPASy TrEMBL
Match: A0A6J1BYE3 (uncharacterized protein LOC111006711 OS=Momordica charantia OX=3673 GN=LOC111006711 PE=4 SV=1) HSP 1 Score: 347.1 bits (889), Expect = 4.2e-92 Identity = 165/166 (99.40%), Postives = 165/166 (99.40%), Query Frame = 0
BLAST of MS003090 vs. ExPASy TrEMBL
Match: A0A5A7T7S1 (Putative Calcium-binding site OS=Cucumis melo var. makuwa OX=1194695 GN=E5676_scaffold311G00150 PE=4 SV=1) HSP 1 Score: 253.8 bits (647), Expect = 4.8e-64 Identity = 134/190 (70.53%), Postives = 143/190 (75.26%), Query Frame = 0
BLAST of MS003090 vs. ExPASy TrEMBL
Match: A0A6J1GUS5 (uncharacterized protein LOC111457115 OS=Cucurbita moschata OX=3662 GN=LOC111457115 PE=4 SV=1) HSP 1 Score: 251.9 bits (642), Expect = 1.8e-63 Identity = 129/170 (75.88%), Postives = 140/170 (82.35%), Query Frame = 0
BLAST of MS003090 vs. ExPASy TrEMBL
Match: A0A1S3CA33 (uncharacterized protein LOC103498137 OS=Cucumis melo OX=3656 GN=LOC103498137 PE=4 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 2.4e-63 Identity = 133/190 (70.00%), Postives = 142/190 (74.74%), Query Frame = 0
BLAST of MS003090 vs. ExPASy TrEMBL
Match: A0A6J1JVD3 (uncharacterized protein LOC111487841 OS=Cucurbita maxima OX=3661 GN=LOC111487841 PE=4 SV=1) HSP 1 Score: 249.6 bits (636), Expect = 9.1e-63 Identity = 127/169 (75.15%), Postives = 140/169 (82.84%), Query Frame = 0
BLAST of MS003090 vs. TAIR 10
Match: AT5G40690.1 (CONTAINS InterPro DOMAIN/s: EF-Hand 1, calcium-binding site (InterPro:IPR018247); BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 130.2 bits (326), Expect = 1.6e-30 Identity = 60/88 (68.18%), Postives = 71/88 (80.68%), Query Frame = 0
BLAST of MS003090 vs. TAIR 10
Match: AT2G41730.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT5G24640.1); Has 25 Blast hits to 25 proteins in 5 species: Archae - 0; Bacteria - 0; Metazoa - 0; Fungi - 0; Plants - 25; Viruses - 0; Other Eukaryotes - 0 (source: NCBI BLink). ) HSP 1 Score: 68.2 bits (165), Expect = 7.3e-12 Identity = 52/137 (37.96%), Postives = 68/137 (49.64%), Query Frame = 0
BLAST of MS003090 vs. TAIR 10
Match: AT5G24640.1 (unknown protein; BEST Arabidopsis thaliana protein match is: unknown protein (TAIR:AT2G41730.1); Has 1807 Blast hits to 1807 proteins in 277 species: Archae - 0; Bacteria - 0; Metazoa - 736; Fungi - 347; Plants - 385; Viruses - 0; Other Eukaryotes - 339 (source: NCBI BLink). ) HSP 1 Score: 60.8 bits (146), Expect = 1.2e-09 Identity = 48/137 (35.04%), Postives = 64/137 (46.72%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
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