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MS003088 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.AACCGCGTTAATTTTGGTATGGAAGTTATGCATGAACATAACGCTCACAACTTCCCTCCAGACCTACCTGCTCTTGAAATTCTATCTATCAATAGA AACCGCGTTAATTTTGGTATGGAAGTTATGCATGAACATAACGCTCACAACTTCCCTCCAGACCTACCTGCTCTTGAAATTCTATCTATCAATAGA AACCGCGTTAATTTTGGTATGGAAGTTATGCATGAACATAACGCTCACAACTTCCCTCCAGACCTACCTGCTCTTGAAATTCTATCTATCAATAGA NRVNFGMEVMHEHNAHNFPPDLPALEILSINR Homology
BLAST of MS003088 vs. NCBI nr
Match: ADQ42094.1 (photosystem II protein D1, partial [Dichanthelium scoparium]) HSP 1 Score: 55.8 bits (133), Expect = 7.7e-05 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. NCBI nr
Match: YP_009766739.1 (photosystem II protein D1 [Intsia bijuga] >QIS97274.1 photosystem II protein D1 [Intsia bijuga]) HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. NCBI nr
Match: KAF7022115.1 (hypothetical protein CFC21_034946 [Triticum aestivum]) HSP 1 Score: 55.5 bits (132), Expect = 1.0e-04 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. NCBI nr
Match: AKI84881.1 (photosystem II protein D1 [Geranium subcaulescens]) HSP 1 Score: 55.1 bits (131), Expect = 1.3e-04 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. NCBI nr
Match: YP_009766151.1 (photosystem II protein D1 [Afzelia quanzensis] >YP_010158070.1 photosystem II protein D1 [Afzelia xylocarpa] >AOW68606.1 photosystem II protein D1 [Afzelia africana] >AOW68689.1 photosystem II protein D1 [Intsia bijuga] >QWY85673.1 photosystem II protein D1 [Afzelia bella] >QWY85756.1 photosystem II protein D1 [Afzelia bipindensis] >QIS96511.1 photosystem II protein D1 [Afzelia quanzensis]) HSP 1 Score: 53.9 bits (128), Expect = 2.9e-04 Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match: A1E9Y8 (Photosystem II protein D1 OS=Agrostis stolonifera OX=63632 GN=psbA PE=3 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 5.0e-07 Identity = 24/31 (77.42%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match: A8Y9F0 (Photosystem II protein D1 OS=Lolium perenne OX=4522 GN=psbA PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07 Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match: Q6ENJ7 (Photosystem II protein D1 OS=Oryza nivara OX=4536 GN=psbA PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07 Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match: P0C432 (Photosystem II protein D1 OS=Oryza sativa OX=4530 GN=psbA PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07 Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MS003088 vs. ExPASy Swiss-Prot
Match: P0C433 (Photosystem II protein D1 OS=Oryza sativa subsp. indica OX=39946 GN=psbA PE=3 SV=1) HSP 1 Score: 52.8 bits (125), Expect = 8.6e-07 Identity = 23/31 (74.19%), Postives = 25/31 (80.65%), Query Frame = 0
BLAST of MS003088 vs. ExPASy TrEMBL
Match: E5FAQ5 (Photosystem II protein D1 (Fragment) OS=Dichanthelium scoparium OX=888270 GN=psbA PE=3 SV=1) HSP 1 Score: 55.8 bits (133), Expect = 3.7e-05 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. ExPASy TrEMBL
Match: A0A6H0E5N2 (Photosystem II protein D1 OS=Intsia bijuga OX=162812 GN=psbA PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-05 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. ExPASy TrEMBL
Match: A0A3B6MI93 (Photosystem II protein D1 OS=Triticum aestivum OX=4565 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-05 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. ExPASy TrEMBL
Match: A0A3B6KN25 (Uncharacterized protein OS=Triticum aestivum OX=4565 PE=3 SV=1) HSP 1 Score: 55.5 bits (132), Expect = 4.9e-05 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. ExPASy TrEMBL
Match: A0A0G2YIE5 (Photosystem II protein D1 OS=Geranium subcaulescens OX=1368268 GN=psbA PE=3 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 6.4e-05 Identity = 24/31 (77.42%), Postives = 26/31 (83.87%), Query Frame = 0
BLAST of MS003088 vs. TAIR 10
Match: ATCG00020.1 (photosystem II reaction center protein A ) HSP 1 Score: 48.9 bits (115), Expect = 8.8e-07 Identity = 22/31 (70.97%), Postives = 23/31 (74.19%), Query Frame = 0
The following BLAST results are available for this feature:
Relationships
The following mRNA feature(s) are a part of this gene:
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