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MS003087 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: CDSpolypeptide Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTTCCCTGGTTGCTGCTGCTGCTGATCCCCCCGGCCCCGGCACCGGCACCGGCAGCGGCCCCTTCTACTTCCATGACAAATGGAAGATGTCCAAGAAAGACCGCTCCTCCAACTCCAACTCCAACTCCCACAGGAGGTGCTCCTTCACCAGAAAGTGCGCCCGATTGGTCAAGGAGCAGAGGGCCAGATTCTACATCATGCGCCGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCT ATGGCTTCCCTGGTTGCTGCTGCTGCTGATCCCCCCGGCCCCGGCACCGGCACCGGCAGCGGCCCCTTCTACTTCCATGACAAATGGAAGATGTCCAAGAAAGACCGCTCCTCCAACTCCAACTCCAACTCCCACAGGAGGTGCTCCTTCACCAGAAAGTGCGCCCGATTGGTCAAGGAGCAGAGGGCCAGATTCTACATCATGCGCCGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCT ATGGCTTCCCTGGTTGCTGCTGCTGCTGATCCCCCCGGCCCCGGCACCGGCACCGGCAGCGGCCCCTTCTACTTCCATGACAAATGGAAGATGTCCAAGAAAGACCGCTCCTCCAACTCCAACTCCAACTCCCACAGGAGGTGCTCCTTCACCAGAAAGTGCGCCCGATTGGTCAAGGAGCAGAGGGCCAGATTCTACATCATGCGCCGCTGCGTCACCATGCTCATCTGCTGGCACGATTACACCGATTCT MASLVAAAADPPGPGTGTGSGPFYFHDKWKMSKKDRSSNSNSNSHRRCSFTRKCARLVKEQRARFYIMRRCVTMLICWHDYTDS Homology
BLAST of MS003087 vs. NCBI nr
Match: KGN51326.1 (hypothetical protein Csa_009192 [Cucumis sativus]) HSP 1 Score: 114.0 bits (284), Expect = 6.3e-22 Identity = 62/93 (66.67%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of MS003087 vs. NCBI nr
Match: KAF3433679.1 (hypothetical protein FNV43_RR24782 [Rhamnella rubrinervis]) HSP 1 Score: 111.3 bits (277), Expect = 4.1e-21 Identity = 60/93 (64.52%), Postives = 67/93 (72.04%), Query Frame = 0
BLAST of MS003087 vs. NCBI nr
Match: XP_022938385.1 (uncharacterized protein LOC111444651 [Cucurbita moschata] >KAG6578688.1 hypothetical protein SDJN03_23136, partial [Cucurbita argyrosperma subsp. sororia] >KAG7016227.1 hypothetical protein SDJN02_21333, partial [Cucurbita argyrosperma subsp. argyrosperma]) HSP 1 Score: 108.6 bits (270), Expect = 2.6e-20 Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of MS003087 vs. NCBI nr
Match: KAE7996759.1 (hypothetical protein FH972_001452 [Carpinus fangiana]) HSP 1 Score: 107.8 bits (268), Expect = 4.5e-20 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of MS003087 vs. NCBI nr
Match: KAB1217849.1 (hypothetical protein CJ030_MR3G014741 [Morella rubra]) HSP 1 Score: 107.5 bits (267), Expect = 5.9e-20 Identity = 53/71 (74.65%), Postives = 57/71 (80.28%), Query Frame = 0
BLAST of MS003087 vs. ExPASy Swiss-Prot
Match: Q8S8S3 (Small polypeptide DEVIL 11 OS=Arabidopsis thaliana OX=3702 GN=DVL11 PE=3 SV=1) HSP 1 Score: 87.4 bits (215), Expect = 8.2e-17 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of MS003087 vs. ExPASy Swiss-Prot
Match: Q6IM93 (Small polypeptide DEVIL 8 OS=Arabidopsis thaliana OX=3702 GN=DVL8 PE=3 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 1.3e-09 Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of MS003087 vs. ExPASy Swiss-Prot
Match: Q8L7D0 (Small polypeptide DEVIL 13 OS=Arabidopsis thaliana OX=3702 GN=DVL13 PE=3 SV=1) HSP 1 Score: 62.0 bits (149), Expect = 3.7e-09 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of MS003087 vs. ExPASy Swiss-Prot
Match: Q7XXN8 (Small polypeptide DEVIL 16 OS=Arabidopsis thaliana OX=3702 GN=DVL16 PE=2 SV=1) HSP 1 Score: 55.1 bits (131), Expect = 4.5e-07 Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003087 vs. ExPASy Swiss-Prot
Match: Q8LE84 (Small polypeptide DEVIL 18 OS=Arabidopsis thaliana OX=3702 GN=DVL18 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 7.7e-07 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0
BLAST of MS003087 vs. ExPASy TrEMBL
Match: A0A0A0KUB0 (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G517730 PE=4 SV=1) HSP 1 Score: 114.0 bits (284), Expect = 3.0e-22 Identity = 62/93 (66.67%), Postives = 68/93 (73.12%), Query Frame = 0
BLAST of MS003087 vs. ExPASy TrEMBL
Match: A0A6J1FJM7 (uncharacterized protein LOC111444651 OS=Cucurbita moschata OX=3662 GN=LOC111444651 PE=4 SV=1) HSP 1 Score: 108.6 bits (270), Expect = 1.3e-20 Identity = 62/93 (66.67%), Postives = 69/93 (74.19%), Query Frame = 0
BLAST of MS003087 vs. ExPASy TrEMBL
Match: A0A5N6QDM8 (Uncharacterized protein OS=Carpinus fangiana OX=176857 GN=FH972_001452 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 2.2e-20 Identity = 53/77 (68.83%), Postives = 60/77 (77.92%), Query Frame = 0
BLAST of MS003087 vs. ExPASy TrEMBL
Match: A0A6A1VY14 (Uncharacterized protein OS=Morella rubra OX=262757 GN=CJ030_MR3G014741 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 2.8e-20 Identity = 53/71 (74.65%), Postives = 57/71 (80.28%), Query Frame = 0
BLAST of MS003087 vs. ExPASy TrEMBL
Match: A0A498JFM7 (Uncharacterized protein OS=Malus domestica OX=3750 GN=DVH24_024162 PE=4 SV=1) HSP 1 Score: 105.9 bits (263), Expect = 8.3e-20 Identity = 52/75 (69.33%), Postives = 59/75 (78.67%), Query Frame = 0
BLAST of MS003087 vs. TAIR 10
Match: AT2G39705.1 (ROTUNDIFOLIA like 8 ) HSP 1 Score: 87.4 bits (215), Expect = 5.9e-18 Identity = 49/80 (61.25%), Postives = 58/80 (72.50%), Query Frame = 0
BLAST of MS003087 vs. TAIR 10
Match: AT3G55515.1 (ROTUNDIFOLIA like 7 ) HSP 1 Score: 63.5 bits (153), Expect = 9.0e-11 Identity = 29/48 (60.42%), Postives = 36/48 (75.00%), Query Frame = 0
BLAST of MS003087 vs. TAIR 10
Match: AT2G29125.1 (ROTUNDIFOLIA like 2 ) HSP 1 Score: 62.0 bits (149), Expect = 2.6e-10 Identity = 31/53 (58.49%), Postives = 41/53 (77.36%), Query Frame = 0
BLAST of MS003087 vs. TAIR 10
Match: AT2G36985.1 (DVL family protein ) HSP 1 Score: 55.1 bits (131), Expect = 3.2e-08 Identity = 20/32 (62.50%), Postives = 29/32 (90.62%), Query Frame = 0
BLAST of MS003087 vs. TAIR 10
Match: AT5G59510.1 (ROTUNDIFOLIA like 5 ) HSP 1 Score: 54.3 bits (129), Expect = 5.5e-08 Identity = 25/50 (50.00%), Postives = 33/50 (66.00%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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