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MS003083 (gene) Bitter gourd (TR) v1
Overview
Sequences
The following sequences are available for this feature:
Legend: polypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGAGGAGCAGTTTGTACTCAGGGTTCCACCTTCTGTTGCTGAGCGAATTGAACGTTTACTAAATGAAAATGCTTCTTCATCTGAAGATGGCTCATTGGATTTGTCATTCTCTGGTAAAATAACTTATCCAATTATATTATGATGCTGTCTTCCTGATCTATGCACTTTCCATTACATTTGCGGTGATGTTGTATGAATGGAAGATCTTTTAGGCTCTTGGACAGATTGGCTTTATAGGCTCTTAAAGAAGCAAAAGTAATTTCTCATACAAAGCACACTTTTTTTTTAACGTTGACATTTTATTAATCGCCTGTATGTGCTTCCTAGACTATTTTCTGCACATAGTTGATCTCTCTCTTGCCATTTCCCTGACCTGTTTGTGCTTTTTTATGTTCTGGAGAAGATTTGAAATGTGAACCTCTGTACTTCTTTTCTCAAGGAAGCATTTTCATTATACTTTGGTATAGTTATGTATGTTAGTTATTGTGAATGGATTTCTATCTGGCCTCTTAAATAAGCCAAATATTTGTTTGCTGCAAGTATTTTCTGGAAAATAAATTTTGGAAGTAATATCTGAAAATAGAAAGAGATTTGGAAAGAGATCAAAGTGTGCATTATGGTTTTGTTTTTATTTTTGGCTTGGTTTATTGTCTATTTACGGTTCCTTAAATTGTCATCCAGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGATGATCACTTTCCAGCATCTCTTCTGGATCTTCCCTGTGTGGTGGAATCATATAAAACTTACGATGATACTGTGCTAATCAAAGCTGCAGACATTGGCCAGGTAAAATGGTTTCAAATTAACATCATTAGCACAGGCATTTAGAAAGACATGATCGCTCCATTTCTAATGTTTTATGGGATGATGTCATTTCCAACAGATGATTATGGTTAGAGAACCAAGTGACCCTGCTCCAGAATCAACTGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCCCGAAAACGTAGATTCCGAAGAGAGCCAGATTTAAATGTATGATCTTCTTATCTCTCTTACTATCCTGGATGTAGGATTTTTTTGTGAGTGGAAATAAATTGCTGTACTGAAATTATAATTCATTGAGATTTCTACTTCTATACAATGAGTAGGTAGTTGGGAGATAAATTATTGAAGGATGCTAGTACAATCTACAATATAGTTTGTGCTACATATGCGCATCGTATATAGAATAAGTTGACATTAATTTCTTTATCTTATTGGTCAACAACAATATCTTAAGCTCTTTTCAATACCAACCTCATTCAATAGTTTCTCAATACTCGAAATATCTTTTCAAGAAGTAGTCAGTCCTATCCTTGCATTTGTTGAGCACTACAAAATTTGTTGCATTTACTAAATGCCTTCTGACTCTTACATACTGATTCTTTTTCCTGTTTTTTCTTTCTCTTTTTGGCAGCCTGAGCTTGTACGACGTGTGGAGAAAGACTTACTGAACATCATGGCAGGAGGAGCTACCGAAAATGTGGATATCCTTAATAATTTTTCAGTTTCATTTGTGTTTTAAAGTCATTACCATGTTAAGTTATGAAACATGTACCCATCCCCATTCCAACCTGCACCAGGAGCTAATAATTATGGCTGATTGAGAATCATTTTAATTAGCAGTCACAAAATTCTTGATTGAAAAGCGTATGGCAACAGGAAAATGACAATTGCTAGTTGAGGCAATTGTCTTGTTTTTGACATGAGTTATGATGTGGTGCAATTAAACTTGAAAAGTTCCTTGACTGAGCATTCTCACATGTTGGAGTGGCTGAGCAACAGAATGATAGAGATAATCATGCAAGTGCAAAGCCTGCATCCGCACCTGCAACAAAGCCTGATGTGATGGAAACTGAAACAAATGTTGGAGAGCCTGAAAGAAGTGACTCTGATGACACTGATCATTCTATTGAT ATGGAGGAGCAGTTTGTACTCAGGGTTCCACCTTCTGTTGCTGAGCGAATTGAACGTTTACTAAATGAAAATGCTTCTTCATCTGAAGATGGCTCATTGGATTTGTCATTCTCTGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGATGATCACTTTCCAGCATCTCTTCTGGATCTTCCCTGTGTGGTGGAATCATATAAAACTTACGATGATACTGTGCTAATCAAAGCTGCAGACATTGGCCAGATGATTATGGTTAGAGAACCAAGTGACCCTGCTCCAGAATCAACTGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCCCGAAAACGTAGATTCCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGACTTACTGAACATCATGGCAGGAGGAGCTACCGAAAATGTGGATATCCTTAATAATTTTTCAGTTTCATTTCAACAGAATGATAGAGATAATCATGCAAGTGCAAAGCCTGCATCCGCACCTGCAACAAAGCCTGATGTGATGGAAACTGAAACAAATGTTGGAGAGCCTGAAAGAAGTGACTCTGATGACACTGATCATTCTATTGAT ATGGAGGAGCAGTTTGTACTCAGGGTTCCACCTTCTGTTGCTGAGCGAATTGAACGTTTACTAAATGAAAATGCTTCTTCATCTGAAGATGGCTCATTGGATTTGTCATTCTCTGAGGATGGGAGAAGTGGCACTTTTGCCATTGGTGATGATCACTTTCCAGCATCTCTTCTGGATCTTCCCTGTGTGGTGGAATCATATAAAACTTACGATGATACTGTGCTAATCAAAGCTGCAGACATTGGCCAGATGATTATGGTTAGAGAACCAAGTGACCCTGCTCCAGAATCAACTGAGTATAGACATGGTCTGACCCCTCCTATGAGGGATGCCCGAAAACGTAGATTCCGAAGAGAGCCAGATTTAAATCCTGAGCTTGTACGACGTGTGGAGAAAGACTTACTGAACATCATGGCAGGAGGAGCTACCGAAAATGTGGATATCCTTAATAATTTTTCAGTTTCATTTCAACAGAATGATAGAGATAATCATGCAAGTGCAAAGCCTGCATCCGCACCTGCAACAAAGCCTGATGTGATGGAAACTGAAACAAATGTTGGAGAGCCTGAAAGAAGTGACTCTGATGACACTGATCATTCTATTGAT MEEQFVLRVPPSVAERIERLLNENASSSEDGSLDLSFSEDGRSGTFAIGDDHFPASLLDLPCVVESYKTYDDTVLIKAADIGQMIMVREPSDPAPESTEYRHGLTPPMRDARKRRFRREPDLNPELVRRVEKDLLNIMAGGATENVDILNNFSVSFQQNDRDNHASAKPASAPATKPDVMETETNVGEPERSDSDDTDHSID Homology
BLAST of MS003083 vs. NCBI nr
Match: XP_022134550.1 (transcription initiation factor TFIID subunit 7 [Momordica charantia] >XP_022134551.1 transcription initiation factor TFIID subunit 7 [Momordica charantia]) HSP 1 Score: 372.5 bits (955), Expect = 2.4e-99 Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of MS003083 vs. NCBI nr
Match: XP_008458871.1 (PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo] >XP_008458872.1 PREDICTED: transcription initiation factor TFIID subunit 7 [Cucumis melo]) HSP 1 Score: 348.6 bits (893), Expect = 3.6e-92 Identity = 183/205 (89.27%), Postives = 190/205 (92.68%), Query Frame = 0
BLAST of MS003083 vs. NCBI nr
Match: XP_004142764.1 (transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655371.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655372.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >XP_011655373.1 transcription initiation factor TFIID subunit 7 [Cucumis sativus] >KAE8648545.1 hypothetical protein Csa_008553 [Cucumis sativus]) HSP 1 Score: 344.7 bits (883), Expect = 5.2e-91 Identity = 181/205 (88.29%), Postives = 190/205 (92.68%), Query Frame = 0
BLAST of MS003083 vs. NCBI nr
Match: XP_038891097.1 (transcription initiation factor TFIID subunit 7 [Benincasa hispida] >XP_038891098.1 transcription initiation factor TFIID subunit 7 [Benincasa hispida]) HSP 1 Score: 343.2 bits (879), Expect = 1.5e-90 Identity = 180/205 (87.80%), Postives = 188/205 (91.71%), Query Frame = 0
BLAST of MS003083 vs. NCBI nr
Match: XP_023516679.1 (transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516685.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516692.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo] >XP_023516700.1 transcription initiation factor TFIID subunit 7 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 340.5 bits (872), Expect = 9.9e-90 Identity = 180/205 (87.80%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of MS003083 vs. ExPASy Swiss-Prot
Match: B9DG24 (Transcription initiation factor TFIID subunit 7 OS=Arabidopsis thaliana OX=3702 GN=TAF7 PE=1 SV=1) HSP 1 Score: 234.6 bits (597), Expect = 1.0e-60 Identity = 114/146 (78.08%), Postives = 132/146 (90.41%), Query Frame = 0
BLAST of MS003083 vs. ExPASy Swiss-Prot
Match: Q9D3R9 (Transcription initiation factor TFIID subunit 7-like OS=Mus musculus OX=10090 GN=Taf7l PE=1 SV=2) HSP 1 Score: 80.5 bits (197), Expect = 2.4e-14 Identity = 48/155 (30.97%), Postives = 81/155 (52.26%), Query Frame = 0
BLAST of MS003083 vs. ExPASy Swiss-Prot
Match: Q6R1L1 (Transcription initiation factor TFIID subunit 7 OS=Cricetulus griseus OX=10029 GN=TAF7 PE=1 SV=1) HSP 1 Score: 77.4 bits (189), Expect = 2.0e-13 Identity = 54/163 (33.13%), Postives = 80/163 (49.08%), Query Frame = 0
BLAST of MS003083 vs. ExPASy Swiss-Prot
Match: Q9R1C0 (Transcription initiation factor TFIID subunit 7 OS=Mus musculus OX=10090 GN=Taf7 PE=1 SV=1) HSP 1 Score: 75.9 bits (185), Expect = 6.0e-13 Identity = 51/163 (31.29%), Postives = 72/163 (44.17%), Query Frame = 0
BLAST of MS003083 vs. ExPASy Swiss-Prot
Match: Q5H9L4 (Transcription initiation factor TFIID subunit 7-like OS=Homo sapiens OX=9606 GN=TAF7L PE=1 SV=1) HSP 1 Score: 73.9 bits (180), Expect = 2.3e-12 Identity = 49/154 (31.82%), Postives = 74/154 (48.05%), Query Frame = 0
BLAST of MS003083 vs. ExPASy TrEMBL
Match: A0A6J1BY39 (transcription initiation factor TFIID subunit 7 OS=Momordica charantia OX=3673 GN=LOC111006768 PE=3 SV=1) HSP 1 Score: 372.5 bits (955), Expect = 1.1e-99 Identity = 194/202 (96.04%), Postives = 196/202 (97.03%), Query Frame = 0
BLAST of MS003083 vs. ExPASy TrEMBL
Match: A0A1S3C8V9 (transcription initiation factor TFIID subunit 7 OS=Cucumis melo OX=3656 GN=LOC103498146 PE=3 SV=1) HSP 1 Score: 348.6 bits (893), Expect = 1.8e-92 Identity = 183/205 (89.27%), Postives = 190/205 (92.68%), Query Frame = 0
BLAST of MS003083 vs. ExPASy TrEMBL
Match: A0A0A0KSB3 (TAFII55_N domain-containing protein OS=Cucumis sativus OX=3659 GN=Csa_5G517200 PE=3 SV=1) HSP 1 Score: 344.7 bits (883), Expect = 2.5e-91 Identity = 181/205 (88.29%), Postives = 190/205 (92.68%), Query Frame = 0
BLAST of MS003083 vs. ExPASy TrEMBL
Match: A0A6J1JR83 (transcription initiation factor TFIID subunit 7 isoform X3 OS=Cucurbita maxima OX=3661 GN=LOC111487113 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89 Identity = 179/205 (87.32%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of MS003083 vs. ExPASy TrEMBL
Match: A0A6J1H9I8 (transcription initiation factor TFIID subunit 7 OS=Cucurbita moschata OX=3662 GN=LOC111461346 PE=3 SV=1) HSP 1 Score: 339.3 bits (869), Expect = 1.1e-89 Identity = 179/205 (87.32%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of MS003083 vs. TAIR 10
Match: AT1G55300.1 (TBP-associated factor 7 ) HSP 1 Score: 246.9 bits (629), Expect = 1.4e-65 Identity = 135/207 (65.22%), Postives = 165/207 (79.71%), Query Frame = 0
BLAST of MS003083 vs. TAIR 10
Match: AT1G55300.2 (TBP-associated factor 7 ) HSP 1 Score: 234.6 bits (597), Expect = 7.1e-62 Identity = 114/146 (78.08%), Postives = 132/146 (90.41%), Query Frame = 0
The following BLAST results are available for this feature:
InterPro
Analysis Name: InterPro Annotations of Bitter gourd (TR) v1
Date Performed: 2021-10-25 Position : 0 Zoom : x 1
Relationships
The following mRNA feature(s) are a part of this gene:
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
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